Hyperproduction of Orotic Acid and Orotidine by Mutants of Bacillus subtilis

The fatty acid composition of lipids in various organs and in the stomach contents of two species of frigate mackerel, Auxis rocheri and Auxis thazard, related to the tuna species was determined. Docosahexaenoic acid was the dominant unsaturated fatty acid accounting for 20% or more of the total fatty acids in all organs of the two frigate mackerel species (mean ±S.D.: 22.6 ± 6.0% for rocheri, 28.0 ± 4.3% for A. thazard), while the fatty acids in lipids from their stomach contents were comparatively low (1.5–13.0% for A. rocheri, 15.4–16.5% for A. thazard). It is suggested that the high content of DHA in the lipids of tuna species is a general characteristic.     

Effect of frozen storage on fatty acid composition of the different tissues of four scombrid and one dussumeriid species

In the current study, the effect of frozen storage at ?18°C was evaluated on fatty acid composition of different body parts (liver, muscle tissue, and viscera) of narrow‐barred Spanish mackerel (Scomberomorus commerson, Lacépède, 1800), longtail tuna (Thunnus tonggol, Bleeker, 1851), kawakawa (Euthynnus affinis, Cantor, 1849), king mackerel (Scomberomorus guttatus, Bloch & Schneider, 1801), and rainbow sardine (Dussumieria acuta, Valenciennes, 1847) caught in the Persian Gulf. Changes in saturated fatty acids (SFAs), monounsaturated fatty acids (MUFAs), polyunsaturated fatty acids (PUFAs), eicosapentaenoic acid plus docosahexaenoic acid/palmitic acid (EPA+DHA/C16), ω3 PUFA/ω6 PUFA (ω3/ω6), and polyunsaturated fatty acids/saturated fatty acids (PUFA/SFA) were investigated during a 6‐month period. A decrease in unsaturated fatty acids, particularly PUFAs (60–100%) as well as ω3/ω6, EPA+DHA/C16 (polyene index) and PUFA/SFA ratios, indicated a decrease in the nutritional values of the samples.     

Life in 3-D: life history strategies in tunas, mackerels and bonitos

The scombrids (tunas, bonitos, Spanish mackerels and mackerels) sustain some of the most important fisheries in the world and their sustainable management depends on better understanding of their life history strategies. Here, we first assemble life history information on maximum size, growth, longevity, maturity, fecundity and spawning duration and interval for all scombrid species. Second we characterize their life history patterns and trait co-variation and evaluate how many principal axes of trait variation underlie scombrid life history strategies. Most of their life history variation can be explained along three axes or dimensions: size, speed, and reproductive schedule. Body size governs the first axis ranking species along a small-large continuum. The second axis was mostly influenced by time-related traits, such as longevity, growth rates, spawning duration, time between spawning events, ranking species along a slow-fast continuum of life histories. Scombrid species with the slowest life histories such as Atlantic bluefin tuna Thunnus thynnus and Atlantic mackerel Scomber scombrus tend to inhabit more temperate waters while species with faster life histories such as yellowfin tuna Thunnus albacares and short mackerel Rastrelliger brachysoma are typically found in more tropical waters. The third axis comprises the negative relationship between number of eggs produced at length of maturity and rate in gain of fecundity with size describing the schedule of reproductive allocation which reflects a fundamental trade-off between reproduction and growth. Finally, in addition we show that the life history strategies of scombrids conform more closely to the Periodic and Opportunistic strategists within the triangular model of fish life histories.     

Chemical Studies on Components of Dried Bonito, “Katsuobushi”

Volatile components obtained by the extraction of “Katsuobushi” with 80% ethanol and by the subsequent steam distillation of the extract were fractionated by the usual methods, and the resulting hydrocarbon fraction was investigated. Gas chromatographic study on this fraction originated from “Katsuobushi” of bonito (Katsuwonus pelamis) revealed 9 hydrocarbons, including n-tetradecane, n-pentadecane, n-hexadecane, n-heptadecane, n-octadecane, n-nonadecane, n-eicosane, n-heneicosane and n-docosane, which were tentatively identified by the retention times with the aid of authentic hydrocarbons. n-Pentadecane and n-heptadecane that were main components among these hydrocarbons were identified further by NMR and IR spectrometry. “Katsuobushi” of frigate mackerel (Auxis thazard), mackerel (Scomber Japonicus Houttuyn) or muroaji (Decapterus muroadsi) also contained n-penta-decane and n-heptadecane in large amounts, but did other hydrocarbons in negligible amounts.

Possible mechanisms of the hydrocarbon formation during the processing of “Katsuobushi” were discussed.     

Feeding of pelagic fish in waters of Mauritania: 2. Representatives of Families Carangidae,Scombridae, Pomatomidae,and Trichiuridae

Feeding peculiarities of mass pelagic ichtyophagous fish from the Canary upwelling waters and frontal zones of Mauritania have been investigated: vadigo Campogramma glaycos, false scad Caranx rhonchus, bluefish Pomatomus saltatrix, Atlantic bonito Sarda sarda, West African Spanish mackerel Scomberomorus tritor, large-eyed hairtail Trichiurus lepturus and pompano Trachinotus ovatus. These species feed on epipelagic fish living or forming temporary agglomerations at the depths up to 200–250 m from the surface.     

A comparison of myocardial β-adrenoreceptor density and ligand binding affinity among selected teleost fishes

This study quantified the cell surface β-adrenoreceptor density and ligand binding affinity in the ventricular tissue of seven teleost species; skipjack tuna (Katsowonus pelamis), yellowfin tuna (Thunnus albacares), Pacific mackerel (Scomber japonicus), mahimahi (dolphin fish; Coryphaena hippurus), sockeye salmon (Oncorhynchus nerka), rainbow trout (Oncorhynchus mykiss) and an Antarctic nototheniid (Trematomus bernacchii). β-Adrenoreceptor density varied by almost fourfold among these species, being highest for the athletic fish: sockeye salmon among the salmonids and skipjack tuna among the scombrids. β-Adrenoreceptor density was lowest for the Antarctic icefish. β-Adrenoreceptor binding affinity varied by almost threefold. We conclude that there is a significant species-specific variability in myocardial β-adrenoreceptor density and binding affinity and these interspecific differences cannot be attributed to temperature even though intraspecifically cold temperature can stimulate an increase in myocardial β-adrenoreceptor density. Instead, we suggest that interspecifically myocardial β-adrenoreceptor density is highest in fish that inhabit tropical water. Accepted: 12 July 2000     

Animal v. plant‐based bait: does the bait type affect census of fish assemblages and trophic groups by baited remote underwater video (BRUV) systems?

Coral reef fish communities were sampled at the Nayband Marine Park, Iran, using baited remote underwater video stations (BRUVSs) which incorporated animal (i.e. frigate tuna Auxis thazard and beef liver), or plant‐based baits (i.e. raw dough and raw dough‐turmeric powder mix). The A. thazard was found to record significantly (P < 0·05) higher species richness and number of carnivorous fishes than plant‐based baits, while abundance of herbivores was maximum in raw dough‐turmeric powder mix trials. There was also a significant difference in trophic composition of fish assemblages surveyed by animal‐ and plant‐based baits which seemed to be due to variations in attraction patterns of carnivores and herbivores occurring at the earlier phases of each BRUV deployments. Meanwhile, the assemblage structure was comparable among fish assemblages sampled by different bait treatments, indicating that species‐level responses to each bait type may be more complicated. In essence, the efficiency of mixed baits should also be examined in future studies.     

Demonstration of migration of juvenile cyprinid fish using parasite biomarkers

Migration of juvenile (0+) cyprinid fish from the Kiso River to experimental streams in the Aqua Restoration Research Center was demonstrated by the presence of parasites on fish. The experimental streams were located a minimum of 0.7 km from the main reach of the Kiso River, and they were connected via a tributary (Shinsakai River). The experimental streams were used as a spawning site and a nursery for juveniles, similar to the use of a temporary water body such as a paddy field. A digenean trematode (Centrocestus spp.) and the glochidia of unionid bivalves, both of which did not infect fish in the experimental streams or in the Shinsakai River, were used as marker parasites. Their presence indicated that the fish moved in the experimental streams from the Kiso River. For both fish species (Gnathopogon elongatus and Zacco platypus) assessed in this study, juveniles greater than 20–30 mm standard length could migrate from the Kiso River. This study showed that temporary waters are important as a nursery for juvenile fish, for whether or not a species spawns there. For the conservation of fish populations, it is important that temporary waters that are used as a nursery are connected with a permanent water area by a channel, through which not only adults, but also juvenile fish can migrate.     

Single genetic stock of kawakawa Euthynnus affinis (Cantor, 1849) along the Indian coast inferred from sequence analyses of mitochondrial DNA D-loop region

Kawakawa Euthynnus affinis is an epipelagic migratory tuna species, widely distributed in the tropical and subtropical waters of the Indo-Pacific region. Kawakawa constitutes the largest tuna fishery in the Indian waters. In the present study, genetic variation was assessed using sequence analyses of Mitochondrial DNA (mtDNA) D-loop region. A 500 bp segment of D-loop region was sequenced in 400 samples collected from eight localities (Veraval (VE), Ratnagiri (RA), Kochi (KO), Kavaratti (KA), Port-Blair (PB), Tuticorin (TU), Pondicherry (PO), and Vizag (VI)) along the Indian coast. Analysis of molecular variance of mtDNA data revealed no significant genetic differentiation among sites the (Φ _ST ?=?0.0028, P?=?0.20723) indicating a single population along the Indian coast. Phylogenetic analysis revealed no obvious phylogeographic pattern separating the eight samples of kawakawa. However, the genealogical relationships demonstrated that mtDNA D-loop sequences belong to two different clades (clade I and clade II). Clade I is the major clade which consists of more than 98?% specimens from each regional population while clade II has individuals from only three populations (VE, PO, and VI). Results of genetic analyses of the present study support a single stock management of kawakawa along the Indian coast.     

Spatial subdivision among assemblages of Spanish mackerel, Scomberomorus commerson (Pisces: Scombridae) across northern Australia: implications for fisheries management

Aim This study investigated the use of stable δ¹³C and δ¹⁸O isotopes in the sagittal otolith carbonate of narrow‐barred Spanish mackerel, Scomberomorus commerson, as indicators of population structure across Australia. Location Samples were collected from 25 locations extending from the lower west coast of Western Australia (30°), across northern Australian waters, and to the east coast of Australia (18°) covering a coastline length of approximately 9500 km, including samples from Indonesia. Methods The stable δ¹³C and δ¹⁸O isotopes in the sagittal otolith carbonate of S. commerson were analysed using standard mass spectrometric techniques. The isotope ratios across northern Australian subregions were subjected to an agglomerative hierarchical cluster analysis to define subregions. Isotope ratios within each of the subregions were compared to assess population structure across Australia. Results Cluster analysis separated samples into four subregions: central Western Australia, north Western Australia, northern Australia and the Gulf of Carpentaria and eastern Australia. Isotope signatures for fish from a number of sampling sites from across Australia and Indonesia were significantly different, indicating population separation. No significant differences were found in otolith isotope ratios between sampling times (no temporal variation). Main conclusions Significant differences in the isotopic signatures of S. commerson demonstrate that there is unlikely to be any substantial movement of fish among these spatially discrete adult assemblages. The lack of temporal variation among otolith isotope ratios indicates that S. commerson populations do not undergo longshore spatial shifts in distribution during their life history. The temporal persistence of spatially explicit stable isotopic signatures indicates that, at these spatial scales, the population units sampled comprise functionally distinct management units or separate ‘stocks’ for many of the purposes of fisheries management. The spatial subdivision evident among populations of S. commerson across northern and western Australia indicates that it may be advantageous to consider S. commerson population dynamics and fisheries management from a metapopulation perspective (at least at the regional level).     

Population genetic evidence for the east–west division of the narrow-barred Spanish mackerel (<Emphasis Type="Italic">Scomberomorus commerson,</Emphasis> Perciformes: Teleostei) along Wallace’s Line

Mitochondrial DNA D-loop (control) region (426-bp) was used to infer the genetic structure of Spanish mackerel (Scomberomorus commerson) from populations in Southeast Asia (Brunei, East and West Malaysia, Philippines, Thailand, Singapore, and China) and northern Australia (including western Timor). An east–west division along Wallace’s Line was strongly supported by a significant AMOVA, with 43% of the total sequence variation partitioned among groups of populations. Phylogenetic and network analyses supported two clades: clade A and clade B. Members of clade A were found in Southeast Asia and northern Australia, but not in locations to the west (Gulf of Thailand) or north (China). Clade B was found exclusively in Southeast Asia. Genetic division along Wallace’s Line suggests that co-management of S. commerson populations for future sustainability may not be necessary between Southeast Asian nations and Australia, however all countries should share the task of management of the species in Southeast Asia equally. More detailed genetic studies of S. commerson populations in the region are warranted.     

Two species of the fish digenean genus <Emphasis Type="Italic">Rhipidocotyle</Emphasis> Diesing, 1858 (Bucephalidae) reported for the first time from European seas

Two species of Rhipidocotyle are described from waters off the Scandola Nature Reserve, Corsica, France: these are the first records of these species from the Mediterranean Sea. R. capitata (Linton, 1940) from Auxis rochei and R. longicirrus (Nagaty, 1937) n. comb. (originally Bucephalopsis longicirrus Nagaty, 1937) from Seriola dumerili are also compared with similar species. R. capitata is similar to several other species of Rhipidocotyle from scombrids, but differs in the structure of the rhyncheal hood and other features. R. longicirrus has an angular, sucker-like rhynchus and, although not of a typical Rhipidocotyle-type, appears to be closer to this genus than to the other genera in which it has been previously placed.     

High toxicity of the novel bloom-forming species Chattonella ovata (Raphidophyceae) to cultured fish

A toxicological study of an axenic cell line of novel species Chattonella ovata Y. Hara et Chihara (Raphidophyceae) revealed that cultured species of sea bream (Pagrus major), horse mackerel (Trachurus japonicus), and yellowtail (Seriola quinqueradiata) were killed by 4.1–6.8 × 10³, 5.4 × 10³, and 2.8 × 10³ cells/mL, respectively. The sensitivity of the gill lamellae to C. ovata differed among the fish species tested. This finding revealed that C. ovata was highly toxic to the cultured fish. Histological examination showed that edema and hyperplasia of the secondary gill lamellae of red sea bream and horse mackerel occurred when exposed to, or killed by C. ovata, whereas severe damage in the gill lamellae was not observed in yellowtail. Chattonella produced high amounts of superoxide anion radicals and hydrogen peroxide, possibly responsible for the fish death observed. Based on the results of this study and occurrence of a red tide by this organism in China in 2001, we consider this organism to be one of the harmful algae in coastal waters. This is the first report demonstrating that C. ovata is highly toxic to fish, and that it produces superoxide and hydrogen peroxide.     

The diet of native and invasive fish species along the eastern Mediterranean coast (Osteichthyes)

The opening of the Suez Canal in 1869 enabled the invasion of more than 100 alien fish species into the Mediterranean. The aim of the present study was to compare the diet of native and alien fish species and to identify possibly shared food resources. We examined the diet composition of 13 of the most abundant fish species (6 alien, 7 native) on shallow soft bottom off southern Israel. All 13 species are omnivorous/carnivorous. The native fish exhibited a wider diversity of food types than the aliens. Alien fish prey upon and are preyed by native species as well as by other alien fish. A high level of diet overlap was found among some species, the aliens Saurida lessepsianus and Scomberomorus commerson overlapped with the native Synodus saurus; and the alien Nemipterus randalli with the native species Pagrus caeruleostictus, Lithognathus mormyrus and Pagellus erythrinus. The identified diet overlap is discussed, and the possibility of competitive interactions between these species is considered.     

Hybridisation,paternal leakage and mitochondrial DNA linearization in three anomalous fish (Scombridae)

Using mitochondrial DNA for species identification and population studies assumes that the genome is maternally inherited, circular, located in the cytoplasm and lacks recombination. This study explores the mitochondrial genomes of three anomalous mackerel. Complete mitochondrial genome sequencing plus nuclear microsatellite genotyping of these fish identified them as Scomberomorus munroi (spotted mackerel). Unlike normal S. munroi, these three fish also contained different linear, mitochondrial genomes of Scomberomorus semifasciatus (grey mackerel). The results are best explained by hybridisation, paternal leakage and mitochondrial DNA linearization. This unusual observation may provide an explanation for mtDNA outliers in animal population studies.     

Patterns of genetic isolation in a widely distributed pelagic fish,the narrow‐barred Spanish mackerel (Scomberomorus commerson)

Although migratory pelagic fishes generally exhibit little geographic differentiation across oceans, as expected from their life history (broadcast spawning, pelagic larval life, swimming ability of adults) and the assumed homogeneity of the pelagic habitat, exceptions to the rule deserve scrutiny. One such exception is the narrow‐barred Spanish mackerel (Scomberomorus commerson Lacepède, 1800), where strong genetic heterogeneity at the regional scale has been previously reported. We investigated the genetic composition of S. commerson across the Indo‐West Pacific range using control‐region sequences (including previously published data sets), cytochrome b gene partial sequences, and eight microsatellite loci, to further explore its phylogeographic structure. All haplotypes sampled from the Indo‐Malay‐Papua archipelago (IMPA) and the south‐western Pacific coalesced into a clade (clade II) that was deeply separated (14.5% nucleotide divergence) from a clade grouping all haplotypes from the Persian Gulf and Oman Sea (clade I). Such a high level of genetic divergence suggested the occurrence of two sister species. Further phylogeographic partition was evident between the western IMPA and the regions sampled east and south of it, i.e. northern Australia, West Papua, and the Coral Sea. Strong allele‐frequency differences were found between local populations in the south‐western Pacific, both at the mitochondrial locus (Φ_st = 0.282–0.609) and at microsatellite loci ( = 0.202–0.313). Clade II consisted of four deeply divergent subclades (9.0–11.8% nucleotide divergence for the control region; 0.3–2.5% divergence at the cytochrome b locus). Mitochondrial subclades within clade II generally had narrow geographic distribution, demonstrating further genetic isolation. However, one particular haplogroup within clade II was present throughout the central Indo‐West Pacific: this haplogroup was found to be the sister group to a haplogroup restricted to West Papua and the Coral Sea, yielding evidence of recent secondary westward colonization. Such a complex structure is in sharp contrast with the generally weak phylogeographic patterns uncovered to date in other widely distributed, large pelagic fishes with pelagic eggs and larvae. We hypothesize that in S. commerson and possibly other Scomberomorus species, philopatric migration may play a role in maintaining the geographic isolation of populations by annihilating the potential consequences of passive dispersal. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 104 , 886–902.     

Ontogenetic changes in the ecological function of the association behavior between jack mackerel <Emphasis Type="Italic">Trachurus japonicus</Emphasis> and jellyfish

Commensal behavior of jack mackerel Trachurus japonicus (Temminck & Schlegel) with jellyfishes has been widely observed but its ecological function is still unclear. The goal of the present research is to examine the function of association behavior with jellyfish in the laboratory and in field observations with an emphasis on ontogenetic changes. In the laboratory, jack mackerel juveniles (mean standard length (SL) = 11, 19, 38, and 55 mm) were placed in 500-l polycarbonate tanks with two live moon jellyfish, Aurelia aurita (Linné), and one artificial jellyfish made of silicon. Association behavior with either live or artificial jellyfish was visually observed under the following conditions: control, presence of a predator model, before and after feeding live Artemia, 1 h and 3 h after feeding, and at night. Jack mackerel at 11 mm SL associated with both the moon jellyfish and artificial jellyfish, unrelated to the presence of a predator model or feeding. Juveniles at 19 mm associated with moon jellyfish only in the presence of a predator model. Larger juveniles associated with moon jellyfish at 1 h and 3 h after feeding. Thus the ecological function of association was proposed to develop first from school formation, next as a hiding place from predators, and then as a food source. Underwater observations of jack mackerel associating with giant jellyfish Nemopilema nomurai (Kishinouye) in two different areas in the Sea of Japan supported this hypothesis. High predation pressure from benthic piscivorous fishes in the southern area (Tsushima) may encourage association with jellyfish, whereas pressure from pelagic predators in the northern area (Maizuru) may encourage settlement to rocky reef habitats in temperate waters. Thus the jellyfish may also function as a vehicle for the northward migration of this species. Guest editors: K. A. Pitt & J. E. Purcell Jellyfish Blooms: Causes, Consequences, and Recent Advances     

Massive consumption of gelatinous plankton by Mediterranean apex predators

Stable isotopes of carbon and nitrogen were used to test the hypothesis that stomach content analysis has systematically overlooked the consumption of gelatinous zooplankton by pelagic mesopredators and apex predators. The results strongly supported a major role of gelatinous plankton in the diet of bluefin tuna (Thunnus thynnus), little tunny (Euthynnus alletteratus), spearfish (Tetrapturus belone) and swordfish (Xiphias gladius). Loggerhead sea turtles (Caretta caretta) in the oceanic stage and ocean sunfish (Mola mola) also primarily relied on gelatinous zooplankton. In contrast, stable isotope ratios ruled out any relevant consumption of gelatinous plankton by bluefish (Pomatomus saltatrix), blue shark (Prionace glauca), leerfish (Lichia amia), bonito (Sarda sarda), striped dolphin (Stenella caerueloalba) and loggerhead sea turtles (Caretta caretta) in the neritic stage, all of which primarily relied on fish and squid. Fin whales (Balaenoptera physalus) were confirmed as crustacean consumers. The ratios of stable isotopes in albacore (Thunnus alalunga), amberjack (Seriola dumerili), blue butterfish (Stromaeus fiatola), bullet tuna (Auxis rochei), dolphinfish (Coryphaena hyppurus), horse mackerel (Trachurus trachurus), mackerel (Scomber scombrus) and pompano (Trachinotus ovatus) were consistent with mixed diets revealed by stomach content analysis, including nekton and crustaceans, but the consumption of gelatinous plankton could not be ruled out completely. In conclusion, the jellyvorous guild in the Mediterranean integrates two specialists (ocean sunfish and loggerhead sea turtles in the oceanic stage) and several opportunists (bluefin tuna, little tunny, spearfish, swordfish and, perhaps, blue butterfish), most of them with shrinking populations due to overfishing.     

Six polymorphic microsatellite loci in the Japanese Spanish mackerel,Scomberomorus niphonius

Six polymorphic microsatellite loci were isolated for genetic structure studies of the Japanese Spanish mackerel, Scomberomorus niphonius, a severely exploited marine fish species. The number of observed alleles for each locus ranged from seven to 41, and the values of expected and observed heterozygosities were 0.546–0.946 and 0.602–1.000, respectively. These microsatellite markers should prove to be a useful tool for estimating the population genetic structure and genetic variability of Japanese Spanish mackerel.