The distribution and prevalence of sponges in relation to environmental gradients within a temperate sea lough: inclined cliff surfaces

Abstract. Sponge communities on inclined cliff surfaces (40°) at Lough Hyne Marine Nature Reserve, Co. Cork, Ireland were sampled at five sites (four inside the lough and one on the adjacent Atlantic coast). Each site varied in sedimentation rate and flow regime. Sites ranged from turbulent (with negligible sedimentation) to very low flow (< 3 cm⁻¹) and highly sedimented regimes. Sponge species showed variation between sites and depth. The greatest difference in sponge communities was observed between the most turbulent and most sedimented sites. The distinct zonation patterns, present at all sites, were most pronounced at the highly sedimented sites. Encrusting forms constituted a high proportion of the sponges at all sites. However encrusting species found at the turbulent site were different to those at the sedimented sites. Arborescent species were common, mainly at the sedimented sites within Lough Hyne. Distributions of sponge species are considered with respect to morphological adaptation, competition and physiological adaptation. The distributions of sponge species on inclined surfaces are also compared with those on vertical cliff faces.     

A sponge diversity centre within a marine ‘island’

The exposed and gulf-stream warmed south-west coast of Ireland has a Lusitanean fauna composed of elements of the colder waters to the north and east, and others from the warmer Mediterranean Sea. Lough Hyne, a small marine body, is unusual on this coast in being very sheltered, but also in being characterised by many different niches within a small space (1 km²). Sponges are particularly abundant, morphologically varied and more than 100 species have been described. Species diversity was measured at 6 m intervals on vertical and inclined profiles (to a maximum of 30 m) at six sites, spanning a range of flow rate and sedimentation regimes. Diversity, richness, evenness and density varied significantly with both flow regime and depth, but was much lower on the surrounding Atlantic coast. Four different sponge communities were differentiated on the basis of sponge species assemblages which correlated with different environmental conditions. At sites of turbulent and fast flow conditions, sponge diversity and richness were lowest, with the highest values being found at the sites of moderate and high sedimentation. Significant differences were observed in all four ecological variables with respect to substratum angle with the exception of the site experiencing the most turbulent flow conditions. Lough Hyne was found to possess the second highest sponge species diversity (H=3.626) and richness (77 species) of all available figures from temperate, polar and tropical areas (of similar sized sampling area). The uniqueness, diversity and species composition of the sponge community at this location suggests Lough Hyne is, biologically, a marine island within the island of Ireland.     

Effect of disturbance on assemblages: an example using porifera

Extensive sponge assemblages are found in a number of habitats at Lough Hyne Marine Nature Reserve. These habitats are unusual in experiencing a range of environmental conditions, even though they are only separated by small geographic distances (1-500 m), reducing the possibility of confounding effects between study sites (e.g., silica concentrations and temperature). Sponge assemblages were examined on ephemeral (rocks), stable (cliffs), and artificial (slate panels) hard substrata from high- and low-energy environments that were used to represent two measures of disturbance (flow rate and habitat stability). Sponge assemblages varied considerably between habitat types such that only 26% (25 species) of species reported were common to both rock and cliff habitats. Seven species (of a total of 96 species) were found in the least-developed assemblages (slate panels) and were common to all habitats. Sponge assemblages on rocks and panels varied little between high- and low-energy environments, whereas assemblages inhabiting cliffs varied considerably. Assemblage composition was visualized using Bray-Curtis similarity analysis and Multi-Dimensional Scaling, which enabled differences and similarities between sponge assemblages to be visualized. Cliffs from high- and low-energy sites had different assemblage compositions compared to large rocks, small rocks, and panels, all of which had similar assemblages irrespective of environmental conditions. Differences in assemblages were partially attributed to sponge morphology (shape), as certain morphologies (e.g., arborescent species) were excluded from 2-D rock habitats. Other mechanisms were also considered responsible for the sponge assemblages associated with different habitats.     

The diet of coastal breeding hooded crows corvus corone comix

Three methods of analysis were used to determine the diet of territorial hooded crows at Lough Hyne Marine Reserve, Co Cork, Ireland The regular collection of prey Items from these sites at Lough Hyne was integrated with pellet and stomach analysis to determine diet Intertidal organisms occurred in over 80% of pellets and 43% of stomachs and occupied over 77% of the total wet weight of foods identified in pellets All prey items recovered from drop sites originated from the intertidal habitat, involved either large-sized species or larger individuals of smaller-sized species, and were only dropped during October to February Twenty-five intertidal species were identified but only a few of these species contributed to the bulk of the diet Hooded crows were shown to consume a wide range of intertidal species throughout the year, though the species composition in the diet was seasonally influenced Depletion and weight loss of intertidal molluscs through the winter was shown to have a minimal effect on selection suggesting that prey switching was driven by the birds nutritional requirements     

Sponges (porifera) distribution along a depth gradient in a coral reef, Parque Nacional San Esteban, Carabobo, Venezuela

Sponges constitute one of the most diverse and abundant animal groups in the marine tropical benthos especially in coral reefs, though poorly studied to species level. The aim of this study is to characterize the sponge community along a depth gradient at Isla Larga (Parque Nacional San Esteban, Venezuela) fringe reef. Net and total sedimentation, roughness index, sponge species richness, density and proportion of the bottom covered by sponges, were evaluated at seven depths (1, 3, 6, 9, 12, 15, 18 m), 17 species were identified grouped in 10 demosponges families. The highest densities and coverage corresponded to 6 m of depth (6.03ind/m2; 11%), that coincides with the lowest net sedimentation and highest substrate heterogeneity. Most abundant species were Desmapsamma anchorata, Amphimedon erina and Scopalina rueztleri. Principal component analysis divided this community in three zones according to depth. The shallow zone of the reef (1 and 3 m), where wave force and high irradiance exert a constant stress sponges, shows the lowest density and coverage by sponges. In contrast, medium depth (6, 9 y 12 m) and deep zone (15 y 18 m) with lower light and sedimentation levels seem to enhance sponge growth and survival that are reflected on the higher densities and coverage of sponges.     

Sponge community structure and anti-predator defenses on temperate reefs of the South Atlantic Bight

Predator–prey interactions can play a significant role in shaping the structure of both terrestrial and marine communities. Sponges are major contributors to benthic community structure on temperate reefs and although several studies have investigated how abiotic processes control sponge distributions on these reefs, the role of predation is less clear. We investigated the relationship between sponge predators and the distribution of sponges on temperate reefs in the South Atlantic Bight (SAB), off Georgia, USA. We documented sponge species richness and abundance, spongivorous fish density, and examined the ability of 19 sponge species to chemically and structurally deter predation by fishes. We also conducted reciprocal transplant experiments to determine if predation by fishes contributes to the observed zonation of sponge species on these reefs. Our surveys revealed two distinct sponge assemblages: one characterized by amorphous and encrusting sponge morphotypes colonizing the vertical, rocky outcroppings (scarp sponge community), while the other consisted of pedunculate, digitate, and arborescent growth forms occurring on the sediment-laden reef top (plateau sponge community). Spongivorous fishes were more abundant on the scarp than the plateau and scarp sponges were found to be more effective than plateau sponges at chemically deterring generalist fishes. In contrast, plateau sponges were more reliant on structural defenses: a result consistent with the higher spicule content of their skeletons. Transplant experiments confirmed that predators prevent some plateau sponges from colonizing the scarp even though they possess structural defenses. Thus, predation appears to play a role in shaping sponge community structure on SAB reefs by restricting those species lacking adequate chemical defenses to habitats where there is a paucity of spongivores.     

Reduced Diversity and High Sponge Abundance on a Sedimented Indo-Pacific Reef System: Implications for Future Changes in Environmental Quality

Although coral reef health across the globe is declining as a result of anthropogenic impacts, relatively little is known of how environmental variability influences reef organisms other than corals and fish. Sponges are an important component of coral reef fauna that perform many important functional roles and changes in their abundance and diversity as a result of environmental change has the potential to affect overall reef ecosystem functioning. In this study, we examined patterns of sponge biodiversity and abundance across a range of environments to assess the potential key drivers of differences in benthic community structure. We found that sponge assemblages were significantly different across the study sites, but were dominated by one species Lamellodysidea herbacea (42% of all sponges patches recorded) and that the differential rate of sediment deposition was the most important variable driving differences in abundance patterns. Lamellodysidea herbacea abundance was positively associated with sedimentation rates, while total sponge abundance excluding Lamellodysidea herbacea was negatively associated with rates of sedimentation. Overall variation in sponge assemblage composition was correlated with a number of variables although each variable explained only a small amount of the overall variation. Although sponge abundance remained similar across environments, diversity was negatively affected by sedimentation, with the most sedimented sites being dominated by a single sponge species. Our study shows how some sponge species are able to tolerate high levels of sediment and that any transition of coral reefs to more sedimented states may result in a shift to a low diversity sponge dominated system, which is likely to have subsequent effects on ecosystem functioning.     

The composition and zonation of a Fucus serratus community in strangford lough,co. down

The flora and fauna associated with the serrated wrack, Fucus serratus L., in Strangford Lough have been studied. Fucus plants were larger where they were most abundant and their distribution was determined largely by the availability of suitable substratum; however, plant size was reduced under turbulent conditions. The fauna contained 79 taxa, of which eleven were common: these comprised four polyzoans, two tunicates, two sponges, two hydroids and a serpulid. All except three were more abundant on plants with low silt loads in turbulent, weedy areas. All species except Electra pilosa (L.) tended to occur on the concave surfaces of the plant. Evidence of zonation in each species' distribution along the plants was obtained. Analysis of association coefficients for the commonest species suggested that there are two distinct species groupings within the community.     

Freshwater sponge (Porifera: Spongillidae) distribution across a landscape: Environmental tolerances,habitats, and morphological variation

Freshwater sponges are important to ecosystem functioning; however, information about their biogeography and interspecific variation is fragmentary, limiting our ability to assess their role. Although the specific epithets of two common species suggest that sponges found in lentic habitats are Spongilla lacustris, and those found in lotic habitats are Ephydatia fluviatilis, the number of sponge species in the UK is unresolved. We sampled sponges in a variety of habitats and used both morphological and molecular (D3 domain of 28S rDNA) methods to identify six species, including the first record of Trochospongilla horrida. We contrasted species in terms of their environmental tolerances, habitats, and variation, and we expanded on the limited information available about the geographic distributions of these sponges. In our study, most sponge species colonized a variety of substrates, but exhibited different distributions. The most widespread sponge, S. lacustris, was present at lower mean water temperatures and was more often located above a latitude of 55°N. Ephydatia fluviatilis was the most common species in rivers, but was also located in lentic habitats. Salinity in anthropogenic habitats was not a significant factor for the presence of E. fluviatilis or the more patchily distributed species Eunapius fragilis. Instead, these species occurred more frequently at sites with negative oxidation–reduction potential. Sponge biodiversity may be affected by substrate availability in anthropogenic habitats, invasive species, and improved ability to recognize sponge taxa. Crucially, we provide foundation data as a prerequisite for future ecological evaluation.     

Testing the suitability of a morphological monitoring approach for identifying temporal variability in a temperate sponge assemblage

Sponges are a dominant component of benthic assemblages in hard substratum environments across the world, but despite the importance of sponges, they are generally poorly represented in most marine monitoring programmes. There is considerable need to develop effective monitoring tools to monitor changes in sponge assemblages. Morphological monitoring has been proposed as a suitable method to monitor sponges and while morphological monitoring has already taken place at Skomer Marine Reserve (MNR), Wales, here we investigate whether species level and morphological level data sets are correlated with respect to temporal variation. Furthermore, we examine the environmental factors that correlate with the patterns of temporal variability. Both species and morphological data sets revealed significant seasonal changes and spatial variation in sponge assemblages; these data sets were highly correlated and explained by a number of environmental factors. We conclude that morphological monitoring of sponge assemblages may represents a cost-effective method for assessing temporal and spatial variation in sponges, where full species level monitoring is not possible, as patterns identified from morphological data were a suitable surrogate of species-level data.     

The effects of sedimentation and light on recruitment and development of a temperate, subtidal, epifaunal community

Sedimentation has often been implicated as a factor in structuring epifaunal assemblages on hard substrata yet there are few studies that empirically test this relationship. This study investigated the effects of light and sedimentation conditions on the initial recruitment and subsequent development of an encrusting community at Lough Hyne, S.W. Ireland. Slate settlement panels were subjected to four different conditions of sedimentation and light. The five replicates of each treatment were photographed at approximately 6-week intervals over 13 months. Values for Brillouin diversity (HB) and number of recruits were greatest for shaded panels sheltered from sediment. Number of species was much higher on downward facing panels relative to upward facing panels, regardless of conditions of sedimentation and light. Sedimentation resulted in reduced cover for some species, such as Lithothamnion spp., whilst others, such as Anomia ephippium, were less affected by this variable. Total space occupied was significantly higher for inverted panels, possibly indicating geotaxic behaviour of some larvae. Number of species on each panel condition was more similar for sets of panels exposed for shorter periods relative to the 13-month experiment, implying that post-settlement mortality may differ between treatments.     

Predictors of the distribution and abundance of a tube sponge and its resident goby

Microhabitat specialists offer tractable systems for studying the role of habitat in determining species’ distribution and abundance patterns. While factors underlying the distribution patterns of these specialists have been studied for decades, few papers have considered factors influencing both the microhabitat and the inhabitant. On the Belizean barrier reef, the obligate sponge-dwelling goby Elacatinus lori inhabits the yellow tube sponge Aplysina fistularis. We used field data and multivariate analyses to simultaneously consider factors influencing sponge and goby distributions. Sponges were non-randomly distributed across the reef with density peaking at a depth of 10–20 m. Sponge morphology also varied with depth: sponges tended to be larger and have fewer tubes with increasing depth. Knowing these patterns of sponge distribution and morphology, we considered how they influenced the distribution of two categories of gobies: residents (≥18 mm SL) and settlers (<18 mm SL). Maximum tube length, number of sponge tubes, and depth were significant predictors of resident distribution. Residents were most abundant in large sponges with multiple tubes, and were virtually absent from sponges shallower than 10 m. Similarly, maximum tube length and number of sponge tubes were significant predictors of settler distribution, with settlers most abundant in large sponges with multiple tubes. The presence or absence of residents in a sponge was not a significant predictor of settler distribution. These results provide us with a clear understanding of where sponges and gobies are found on the reef and support the hypothesis that microhabitat characteristics are good predictors of fish abundance for species that are tightly linked to microhabitat.     

Role of deep sponge grounds in the Mediterranean Sea: a case study in southern Italy

The Mediterranean spongofauna is relatively well-known for habitats shallower than 100 m, but, differently from oceanic basins, information upon diversity and functional role of sponge grounds inhabiting deep environments is much more fragmentary. Aims of this article are to characterize through ROV image analysis the population structure of the sponge assemblages found in two deep habitats of the Mediterranean Sea and to test their structuring role, mainly focusing on the demosponges Pachastrella monilifera Schmidt, 1868 and Poecillastra compressa (Bowerbank, 1866). In both study sites, the two target sponge species constitute a mixed assemblage. In the Amendolara Bank (Ionian Sea), where P. compressa is the most abundant species, sponges extend on a peculiar tabular bedrock between 120 and 180 m depth with an average total abundance of 7.3 ± 1.1 specimens m⁻² (approximately 230 gWW m⁻² of biomass). In contrast, the deeper assemblage of Bari Canyon (average total abundance 10.0 ± 0.7 specimens m⁻², approximately 315 gWW m⁻² of biomass), located in the southwestern Adriatic Sea between 380 and 500 m depth, is dominated by P. monilifera mixed with living colonies of the scleractinian Madrepora oculata Linnaeus, 1758, the latter showing a total biomass comparable to that of sponges (386 gWW m⁻²). Due to their erect growth habit, these sponges contribute to create complex three-dimensional habitats in otherwise homogenous environments exposed to high sedimentation rates and attract numerous species of mobile invertebrates (mainly echinoderms) and fish. Sponges themselves may represent a secondary substrate for a specialized associated fauna, such zoanthids. As demonstrated in oceanic environments sponge beds support also in the Mediterranean Sea locally rich biodiversity levels. Sponges emerge also as important elements of benthic–pelagic coupling in these deep habitats. In fact, while exploiting the suspended organic matter, about 20% of the Bari sponge assemblage is also severely affected by cidarid sea urchin grazing, responsible to cause visible damages to the sponge tissues (an average of 12.1 ± 1.8 gWW of individual biomass removed by grazing). Hence, in deep-sea ecosystems, not only the coral habitats, but also the grounds of massive sponges represent important biodiversity reservoirs and contribute to the trophic recycling of organic matter.     

Archaea Appear to Dominate the Microbiome of Inflatella pellicula Deep Sea Sponges

Microbes associated with marine sponges play significant roles in host physiology. Remarkable levels of microbial diversity have been observed in sponges worldwide through both culture-dependent and culture-independent studies. Most studies have focused on the structure of the bacterial communities in sponges and have involved sponges sampled from shallow waters. Here, we used pyrosequencing of 16S rRNA genes to compare the bacterial and archaeal communities associated with two individuals of the marine sponge Inflatella pellicula from the deep-sea, sampled from a depth of 2,900 m, a depth which far exceeds any previous sequence-based report of sponge-associated microbial communities. Sponge-microbial communities were also compared to the microbial community in the surrounding seawater. Sponge-associated microbial communities were dominated by archaeal sequencing reads with a single archaeal OTU, comprising ∼60% and ∼72% of sequences, being observed from Inflatella pellicula. Archaeal sequencing reads were less abundant in seawater (∼11% of sequences). Sponge-associated microbial communities were less diverse and less even than any other sponge-microbial community investigated to date with just 210 and 273 OTUs (97% sequence identity) identified in sponges, with 4 and 6 dominant OTUs comprising ∼88% and ∼89% of sequences, respectively. Members of the candidate phyla, SAR406, NC10 and ZB3 are reported here from sponges for the first time, increasing the number of bacterial phyla or candidate divisions associated with sponges to 43. A minor cohort from both sponge samples (∼0.2% and ∼0.3% of sequences) were not classified to phylum level. A single OTU, common to both sponge individuals, dominates these unclassified reads and shares sequence homology with a sponge associated clone which itself has no known close relative and may represent a novel taxon.     

Sponge assemblages of the deep Weddell Sea: ecological and zoogeographic results of ANDEEP I–III and SYSTCO I expeditions

The aim of this study is to analyze the community structure, ecology and distribution of deep Weddell Sea sponge faunas. Analysis was performed on the basis of sponges sampled during ANDEEP I–III and SYSTCO I expeditions (2002–2008) by RV Polarstern. The material obtained comprises about 800 sponge specimens, representing 129 species, within these are 95 species of demosponges (including 15 new to science), 25 hexactinellid species (7 new) and 9 calcarean species (5 new). Sponges were sampled at 51 stations in depths between 500 and 5,500 m. At most stations, sponge densities were very low, and many species are represented by one or two specimens only. Community structure by Bray–Curtis similarity was analyzed as well as depth range and spatial distribution of the most common species. Zoogeographic affinities of sampled faunas are analyzed. Three associations of sponges are found in the deep Weddell Sea: (1) The Polymastia/Tentorium community, (including Rossella associations) distributed on the lower shelf and continental slope. (2) The Bathydorus community, distributed on the continental slope and upper abyssal. (3) The Caulophacus community, associated with Cladorhizidae, is characteristic for the abyssal plains. The associations follow each other successively both bathymetrically and geographically, from shallow to deep, from shelf and ridge structures into the open abyssal. A distinct faunistic boundary between shelf and deep sea is not present. In general, the sponge fauna of the deep Weddell Sea is regionally restricted and shows stronger affinities only to the sponge fauna of the subantarctic islands.     

Living on the edge: the sponge fauna of Australia’s southwestern and northwestern deep continental margin

This first assessment of sponges on Australia’s deep western continental margin (100–1,100 m) found that highly species-rich sponge assemblages dominate the megabenthic invertebrate biomass in both southwestern (86%) and northwestern (35%) areas. The demosponge orders Poecilosclerida, Dictyoceratida, Haplosclerida, and Astrophorida are dominant, while the presence of the order Agelasida, lithistid sponges, and the Verongida are noteworthy in providing contrasts to other studies from the deep temperate Australian margin. Most sponge species appeared to be rare as two-thirds were present in only one or two samples—a finding consistent with studies of the shallow Australian sponge fauna. The Demospongiae and Calcarea had similar distribution and abundance patterns being found in the greatest numbers in the south on the outer shelf and shelf edge in hard substrates. In contrast, the Hexactinellida were more abundant at deeper depths and in soft substrates, and were more common in the north. Although the environmental factors that influence sponge distributions on the western margin cannot be completely understood from the physical covariates analyzed in this study, the data suggest depth-related factors, substrate type, and current regimes are the most influential. Incompletely documented historic demersal trawling may partly account for the lower sponge biomass found in the north. The potentially high importance of sponges to benthic ecosystems, as well as the potential for high impacts on sponges by bottom trawling, indicates that maintaining healthy sponge assemblages should be an important consideration for marine conservation planners. Successful management will need to be under-pinned by additional research that better identifies the ecological roles of sponges, and their distributions over local and broad environmental scales.     

Estimates of particulate organic carbon flowing from the pelagic environment to the benthos through sponge assemblages

Despite the importance of trophic interactions between organisms, and the relationship between primary production and benthic diversity, there have been few studies that have quantified the carbon flow from pelagic to benthic environments as a result of the assemblage level activity of suspension-feeding organisms. In this study, we examine the feeding activity of seven common sponge species from the Taputeranga marine reserve on the south coast of Wellington in New Zealand. We analysed the diet composition, feeding efficiency, pumping rates, and the number of food particles (specifically picoplanktonic prokaryotic cells) retained by sponges. We used this information, combined with abundance estimates of the sponges and estimations of the total amount of food available to sponges in a known volume of water (89,821 m(3)), to estimate: (1) particulate organic carbon (POC) fluxes through sponges as a result of their suspension-feeding activities on picoplankton; and (2) the proportion of the available POC from picoplankton that sponges consume. The most POC acquired by the sponges was from non-photosynthetic bacterial cells (ranging from 0.09 to 4.69 g C d(-1) with varying sponge percentage cover from 0.5 to 5%), followed by Prochlorococcus (0.07 to 3.47 g C d(-1)) and then Synechococcus (0.05 to 2.34 g C d(-1)) cells. Depending on sponge abundance, the amount of POC that sponges consumed as a proportion of the total POC available was 0.2-12.1% for Bac, 0.4-21.3% for Prochlo, and 0.3-15.8% for Synecho. The flux of POC for the whole sponge assemblage, based on the consumption of prokaryotic picoplankton, ranged from 0.07-3.50 g C m(2) d(-1). This study is the first to estimate the contribution of a sponge assemblage (rather than focusing on individual sponge species) to POC flow from three groups of picoplankton in a temperate rocky reef through the feeding activity of sponges and demonstrates the importance of sponges to energy flow in rocky reef environments.     

Association of Thioautotrophic Bacteria with Deep-Sea Sponges

We investigated microorganisms associated with a deep-sea sponge, Characella sp. (Pachastrellidae) collected at a hydrothermal vent site (686 m depth) in the Sumisu Caldera, Ogasawara Island chain, Japan, and with two sponges, Pachastrella sp. (Pachastrellidae) and an unidentified Poecilosclerida sponge, collected at an oil seep (572 m depth) in the Gulf of Mexico, using polymerase chain reaction–denaturing gradient gel electrophoresis (PCR-DGGE) directed at bacterial 16S rRNA gene sequences. In the PCR-DGGE profiles, we detected a single clearly dominant band in each of the Characella sp. and the unidentified Poecilosclerida sponge. BLAST search of their sequences showed that they were most similar (>99% identity) to those of the gammaproteobacterial thioautotrophic symbionts of deep-sea bivalves from hydrothermal vents, Bathymodiolus spp. Phylogenetic analysis of the near-full length sequences of the 16S rRNA genes cloned from the unidentified Poecilosclerida sponge and Characella sp. confirmed that they were closely related to thioautotrophic symbionts. Although associations between sponges and methanotrophic bacteria have been reported previously, this is the first report of a possible stable association between sponges and thioautotrophic bacteria.     

Analysis of bacterial communities in sponges and coral inhabiting Red Sea,using barcoded 454 pyrosequencing

Microbial communities are linked with marine sponge are diverse in their structure and function. Our understanding of the sponge-associated microbial diversity is limited especially from Red Sea in Saudi Arabia where few species of sponges have been studied. Here we used pyrosequencing to study two marine sponges and coral species sampled from Obhur region from Red sea in Jeddah. A total of 168 operational taxonomic units (OTUs) were identified from Haliclona caerulea, Stylissa carteri and Rhytisma fulvum. Taxonomic identification of tag sequences of 16S ribosomal RNA revealed 6 different bacterial phyla and 9 different classes. A proportion of unclassified reads were was also observed in sponges and coral sample. We found diverse bacterial communities associated with two sponges and a coral sample. Diversity and richness estimates based on OUTs revealed that sponge H. caerulea had significantly high bacterial diversity. The identified OTUs showed unique clustering in three sponge samples as revealed by Principal coordinate analysis (PCoA). Proteobacteria (88–95%) was dominant phyla alonwith Bacteroidetes, Planctomycetes, Cyanobacteria, Firmicutes and Nitrospirae. Seventeen different genera were identified where genus Pseudoalteromonas was dominant in all three samples. This is first study to assess bacterial communities of sponge and coral sample that have never been studied before to unravel their microbial communities using 454-pyrosequencing method.     

Quantifying assemblage distinctness with time: an example using temperate epibenthos

Artificial substrata are an often-used tool in assessing community development; here we quantify the changing presence of functional groups of benthos with replicate, depth, site, and time in order to explain differences in the structure of the surrounding mature communities. We placed replicate, machined slate panels (15×15×1 cm) in the intertidal, 6 and 12 m at two sites of differing flow rates at Lough Hyne, SW Ireland. They were placed at the same time of year and removed after 2, 6, 12, and 24 months from 1999 to 2001, to compare with a similar experiment run from 1997 to 1999. Furthermore, to examine trends of local assemblages older than 24 months, we examined boulders from each depth/site combination. Percentage cover of 13 functional groups, selected in relation to their competitive abilities, was measured using point intercept analysis of high-resolution digital images of the panels. These data were then quantified using our derived measure of distinctness. Replicates became more similar, and sites and depths both became more distinct with time from 2 to 24 months, although there was less distinctness at the high flow site throughout all stages of the study. Principal components analysis (PCA) of data suggested that all site/depth panel combinations only became truly distinct at the 24-month stage of the study. From 2 to 24 months, ‘good’ competitors increased in space, ‘intermediate’ competitors peaked after ≈12 months, and ‘poor’ competitors reduced in their space occupation with increasing time. Both in similarity and space occupation of functional groups, the 1997-1999 and 1999-2001 data showed high levels of pattern convergence. That there was little difference between assemblages at 12 and 24 months validated our upper time limit of period of study, but at 24 months, assemblages still differed from natural substrata and we suggest that many years would have been necessary to eliminate this difference.