莱茵衣藻酰基辅酶A合成酶cDNA克隆及其酵母表达

旨在预测并克隆莱茵衣藻酰基辅酶A合成酶cDNA(cracs),分析其在酵母中的功能。RT-PCR克隆cracs序列,Clustal W和MEGA6.0软件分别分析其编码蛋白保守序列和进化树,表达并分析其在酵母YB525中的底物偏好性。结果表明,首次在莱茵衣藻中克隆获得一个cracs,测序表明其序列大小为2 004 bp,编码667个氨基酸,编码蛋白crACS的预测分子量为72.3k D,包含酰基辅酶A合成酶的两个保守区:AMP-binding区和FACS区。进化树比对显示,cr ACS与拟南芥的长链酰基辅酶A合成酶LACSs具有较高的同源性。酵母表达显示cracs编码蛋白能互补酵母YB525 LACS的缺陷表型,活化并优先利用C16∶1和C14∶0。莱茵衣藻cracs编码蛋白可活化外源脂肪酸,属于酰基辅酶A合成酶家族。     

靶向甲羟戊酸途径抗血液肿瘤的研究进展

甲羟戊酸(mevalonate, MVA)途径是胆固醇合成的核心代谢通路,该途径异常参与多种肿瘤发生发展。羟甲基戊二酰辅酶A还原酶(3-hydroxy-3-methylglutaryl-CoA reductase, HMGCR)、羟甲基戊二酰辅酶A合酶1 (3-hydroxy-3-methylglutaryl-CoA synthase 1, HMGCS1)及固醇调节元件结合蛋白2 (sterol regulatory element binding protein 2, SREBP2)是MVA途径关键限速蛋白,能够在基因转录、蛋白质翻译和降解等过程中被精细调控。本文围绕MVA途径调控网络关键代谢酶、其与血液肿瘤的关系以及相关调节剂在血液肿瘤中的应用进行综述。     

中国水仙查尔酮合酶cDNA的克隆及序列分析(简报)

中国水仙系石蒜科水仙属多年生草本植物。其花枝多,花香浓郁,素有“凌波仙子”的美称。但水仙花色单一,影响其观赏价值。花色形成与植物体内的一类次级代谢产物类黄酮有关。查尔酮合酶(Chalcone synthase,CHS)是类黄酮合成途径中的一个关键酶,在植物体内它催化丙二酰基辅酶A的三个乙酸基和对羟苯丙烯酰辅酶A的一个乙酸基的缩合,产生柚配基查尔酮(naringenin)。此中心中     

向日葵HaLACS1的克隆、表达及酵母功能互补鉴定

探究长链酰基辅酶A合成酶(long chain acyl-CoA synthetase,LACS)基因在向日葵(Helianthus annuus L.)油脂积累和逆境响应中的功能,为其在向日葵油脂合成和抗逆中的应用奠定基础。通过RT-PCR克隆得到向日葵HaLACS1的CDS序列,运用生物信息学方法分析HaLACS1的特点。利用实时荧光定量PCR(qRT-PCR)技术检测HaLACS1的组织表达特性及对NaCl、PEG和ABA的响应情况。通过构建GFP和HaLACS1的融合表达载体,转化拟南芥原生质体进行亚细胞定位分析。将HaLACS1转入酿酒酵母突变型菌株YB525中进行功能互补试验,并进行底物偏好性分析。结果显示,HaLACS1开放阅读框1 980 bp,编码659个氨基酸。蛋白进化树分析表明,HaLACS1与拟南芥AtLACS1和莴苣(Lactuca sativa)LsLACS1具有较高的相似性。拟南芥原生质体瞬时表达分析显示HaLACS1定位于内质网。实时荧光定量PCR结果显示,HaLACS1在所有组织中均有表达,但在种子发育的早期表达量较高,花次之。NaCl、PEG和ABA...     

植物GPATs基因研究进展

甘油-3-磷酸酰基转移酶(Glycerol-3-phosphate acyltransferase, GPAT)是三酰甘油(Triacylglycerol, TAG)生物合成的限速酶, 催化TAG生物合成的起始步骤。GPATs主要负责将脂肪酰基从酰基-酰基载体蛋白(acyl-ACP)或酰基辅酶A(acyl-CoA)上转移到甘油-3-磷酸的(Glycerol-3-phosphate, G3P) sn-1位置上。有些成员还具有sn-2酰基转移活性。目前已经在多种植物中克隆得到了GPAT基因。这些GPAT基因编码的酶主要分为三类, 它们在细胞中分别定位于质体、线粒体和内质网上。这些酶参与三酰甘油、几丁质和软木脂等多种脂质的生物合成, 在植物的生长发育中发挥着非常重要的作用。文章介绍了植物GPAT基因的染色体定位和基因结构以及GPAT酶的亚细胞定位、sn-2酰基转移特异性、GPAT酶的底物选择性及其生理功能的最新研究进展。     

过氧物酶体多功能酶2中固醇载体蛋白2结构域的功能

过氧物酶体多功能酶 (包括Ⅰ型、Ⅱ型 ,简称MFE1、MFE2 )在哺乳类动物的脂类代谢中发挥其重要作用 .MFE1具有 2 烯酰CoA水合酶 1和 (3S) 羟脂酰CoA脱氢酶的活性 ,而MFE2具有 2 烯酰CoA水合酶 2和 (3R) 羟脂酰CoA脱氢酶的活性 ,两者均催化烯酰CoA在过氧物酶体β 氧化途径中的第 2步和第 3步反应 .MFE1与MFE2的氨基酸序列不具有任何同源性 ,并且它们的底物特异性也不相同 .比较哺乳类MFE1及酵母MFE2发现 ,哺乳类MFE2羧基末端带有由 12 5个残基组成的固醇载体蛋白 2 (简称SCP2 )结构域 ,其功能是未知的 .为了研究SCP2结构域在MFE2中的功能 ,将人MFE2、MFE2ΔSCP2 (删除MFE2中的SCP2 )、脱氢酶结构域、水合酶结构域以及SCP2结构域分别在E .coli中表达 ,并经纯化得到相应的重组蛋白 .通过测定 2 烯酰CoA水合酶 2和 (3R) 羟脂酰CoA脱氢酶对烯酰CoA的催化活性发现 ,带有SCP2结构域的重组蛋白的酶活力及催化效率高于删除SCP2的突变体蛋白 .实验结果表明 ,SCP2结构域可能通过增强MFE2与脂酰CoA的结合力 ,使得MFE2发挥最有效的催化活力     

基于藜麦转录组的脂肪酸生物合成途径解析

藜麦营养丰富,油脂含量高,脂肪酸组成理想,是油脂提取物的潜在资源。植物油脂主要以三酰甘油的形式储存在作物种子和果实等器官中,其合成受到环境和基因水平的调控,涉及质体、内质网和油体等多个细胞器。该文基于藜麦转录组数据,对藜麦油脂合成相关的脂肪酸生物合成途径基因进行挖掘,并对基因表达模式进行分析。结果表明:在藜麦中,与脂肪酸生物合成相关的基因序列共87条,涉及乙酰CoA羧化酶和β-酮脂酰ACP合成酶等关键酶,其中编码长链酰基辅酶A合成酶基因和β-酮脂酰ACP还原酶数目最多。通过基因表达模式分析发现,与脂肪酸生物合成相关的基因在种子表达中呈现整体上调模式,可能与种子中油脂形成和积累密切相关。对藜麦乙酰CoA羧化酶亚基编码基因进行分析发现,accD基因在不同组织间无差异表达,表明在藜麦中accD编码的β-CT亚基可能不是影响乙酰CoA羧化酶发挥作用的限制因子。藜麦KASⅡ含有保守结构域,与其他组织相比,编码基因QcFb15、QcFb45和QcFb75在种子中均存在上调表达,参与藜麦脂肪酸碳链延伸及油脂形成。对藜麦脂肪酸生物合成途径相关基因的挖掘,为藜麦油脂合成和积累的研究提供了理论基础,对高油...     

哺乳动物氨基酰-tRNA合成酶的研究

1 氨基酰-tRNA合成酶及哺乳动物细胞中氨基酰 tRNA合成酶的特点 1．1 氨基酰-tRNA合成酶催化的反应氨基酰-tRNA合成酶家族(aaRS)参与生物体中的遗传解码过程。它们催化氨基酸与其对应的 tRNA之间的酯化反应,生成氨基酰-tRNA参与蛋白质的生物合成,它反应的专一性确保了蛋白质生物合成的精确性。氨基酸与其对应的tRNA之间的     

种子萌发过程中贮藏油脂的动员

对植物种子萌发过程中贮藏油脂动员的研究进展进行了综述。不同种子的贮藏油脂的降解途径不同。目前提出有3条途径:传统的脂酶直接水解途径;新近发现的酰基-CoA-二酯酰甘油酰基转移酶途径和脂氧合酶(LOX)途径。前两条途径不依赖于LOX。这3条途径可能在贮藏油脂动员过程中是并存的,但目前尚不知道在种子萌发过程中油脂降解是以那一条降解途径为主,以及不同的种之间是否存在差异。此外,3条降解途径目前都缺乏分子生物学的直接证据。     

新型可再生工业用油脂的代谢工程

植物种子油是一种可再生资源,亦用作生物燃油和化学工业原料. 一些野生植物能高水平合成积累羟化、环氧化和共轭脂肪酸等具有重要工业应用价值的特异脂肪酸.催化这些特异脂肪酸合成的酶主要是类脂肪酸去胞和酶2(类FAD2). 由特异脂肪酸合成到三酰基甘油脂 (TAG) 形成还需要酰基转移酶 (如DGAT) 的参与. 在油料作物种子中表达类FAD2酶及其相关基因(如DGAT),已培育出了能合成积累一定含量特异脂肪酸的工程油料品系,为基于农作物生产高附加值工业用油脂开辟了新途径. 本文论述了参与特异脂肪酸生物合成途径的关键酶基因、油料作物代谢工程策略,以及应用工程油料作物大规模生产重要工业用脂肪酸的研究进展、存在问题和应用前景等.     

The ergosterol biosynthesis inhibitor zaragozic acid promotes vacuolar degradation of the tryptophan permease Tat2p in yeast

Ergosterol is the yeast functional equivalent of cholesterol in mammalian cells. Deletion of the ERG6 gene, which encodes an enzyme catalyzing a late step of ergosterol biosynthesis, impedes targeting of the tryptophan permease Tat2p to the plasma membrane, but does not promote vacuolar degradation. It is unknown whether similar features appear when other steps of ergosterol biogenesis are inhibited. We show herein that the ergosterol biosynthesis inhibitor zaragozic acid (ZA) evoked massive vacuolar degradation of Tat2p, accompanied by a decrease in tryptophan uptake. ZA inhibits squalene synthetase (SQS, EC 2.5.1.21), which catalyzes the first committed step in the formation of cholesterol/ergosterol. The degradation of Tat2p was dependent on the Rsp5p-mediated ubiquitination of Tat2p and was not suppressed by deletions of VPS1, VPS27, VPS45 or PEP12. We will discuss ZA-mediated Tat2p degradation in the context of lipid rafts.     

Identification and Characterization of Major Lipid Particle Proteins of the Yeast Saccharomyces cerevisiae

Lipid particles of the yeast Saccharomyces cerevisiae were isolated at high purity, and their proteins were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Major lipid particle proteins were identified by mass spectrometric analysis, and the corresponding open reading frames (ORFs) were deduced. In silicio analysis revealed that all lipid particle proteins contain several hydrophobic domains but none or only few (hypothetical) transmembrane spanning regions. All lipid particle proteins identified by function so far, such as Erg1p, Erg6p, and Erg7p (ergosterol biosynthesis) and Faa1p, Faa4p, and Fat1p (fatty acid metabolism), are involved in lipid metabolism. Based on sequence homology, another group of three lipid particle proteins may be involved in lipid degradation. To examine whether lipid particle proteins of unknown function are also involved in lipid synthesis, mutants with deletions of the respective ORFs were constructed and subjected to systematic lipid analysis. Deletion of YDL193w resulted in a lethal phenotype which could not be suppressed by supplementation with ergosterol or fatty acids. Other deletion mutants were viable under standard conditions. Strains with YBR177c, YMR313c, and YKL140w deleted exhibited phospholipid and/or neutral lipid patterns that were different from the wild-type strain and thus may be further candidate ORFs involved in yeast lipid metabolism.     

The ergosterol biosynthesis inhibitor zaragozic acid promotes vacuolar degradation of the tryptophan permease Tat2p in yeast

Ergosterol is the yeast functional equivalent of cholesterol in mammalian cells. Deletion of the ERG6 gene, which encodes an enzyme catalyzing a late step of ergosterol biosynthesis, impedes targeting of the tryptophan permease Tat2p to the plasma membrane, but does not promote vacuolar degradation. It is unknown whether similar features appear when other steps of ergosterol biogenesis are inhibited. We show herein that the ergosterol biosynthesis inhibitor zaragozic acid (ZA) evoked massive vacuolar degradation of Tat2p, accompanied by a decrease in tryptophan uptake. ZA inhibits squalene synthetase (SQS, EC 2.5.1.21), which catalyzes the first committed step in the formation of cholesterol/ergosterol. The degradation of Tat2p was dependent on the Rsp5p-mediated ubiquitination of Tat2p and was not suppressed by deletions of VPS1, VPS27, VPS45 or PEP12. We will discuss ZA-mediated Tat2p degradation in the context of lipid rafts.     

Mechanisms of glycerophospholipid homeostasis in mammalian cells

The membranes of mammalian cells contain hundreds of different phospholipid species, a variety of glycolipids and cholesterol. While the reasons for such compositional diversity are not well established, they probably relate to a multitude of membrane-associated functions each of which sets specific requirements for the chemical and physical properties of membranes. The lipid composition of membranes must therefore be accurately controlled. The maintenance of phospholipid homeostasis in a mammalian cell is a daunting task due to presence of many phospholipid (and other lipid) classes and hundreds of different molecular species. In addition, the phospholipid composition of the cellular membranes depends on several different phenomena including biosynthesis, remodelling, degradation and interorganelle trafficking. Accordingly, it is not surprising that phospholipid homeostasis in mammalian cells is poorly understood. Particularly little is known about the regulation and coordination of processes contributing to homeostasis. Nevertheless, it has become obvious that selective degradation plays a major role, albeit the enzymes involved remain to be discovered. Beside the complexity of the phenomenon, methodological limitations have hampered the progress in this field. Here, we review the key features of the processes contributing to phospholipid homeostasis in mammalian cells, with a particular emphasis on the regulation and coordination of biosynthesis and degradation.     

Inhibition of cholesterol biosynthesis disrupts lipid raft/caveolae and affects insulin receptor activation in 3T3-L1 preadipocytes

Lipid rafts are plasma membrane microdomains that are highly enriched with cholesterol and sphingolipids and in which various receptors and other proteins involved in signal transduction reside. In the present work, we analyzed the effect of cholesterol biosynthesis inhibition on lipid raft/caveolae composition and functionality and assessed whether sterol precursors of cholesterol could substitute for cholesterol in lipid rafts/caveolae. 3T3-L1 preadipocytes were treated with distal inhibitors of cholesterol biosynthesis or vehicle (control) and then membrane rafts were isolated by sucrose density gradient centrifugation. Inhibition of cholesterol biosynthesis with either SKF 104976, AY 9944, 5,22-cholestadien-3β-ol or triparanol, which inhibit different enzymes on the pathway, led to a marked reduction in cholesterol content and accumulation of different sterol intermediates in both lipid rafts and non-raft domains. These changes in sterol composition were accompanied by disruption of lipid rafts, with redistribution of caveolin-1 and Fyn, impairment of insulin-Akt signaling and the inhibition of insulin-stimulated glucose transport. Cholesterol repletion abrogated the effects of cholesterol biosynthesis inhibitors, reflecting they were specific. Our results show that cholesterol is required for functional raft-dependent insulin signaling.     

The common phospholipid-binding activity of the N-terminal domains of PEX1 and VCP/p97

PEX1 is a type II AAA-ATPase that is indispensable for biogenesis and maintenance of the peroxisome, an organelle responsible for the primary metabolism of lipids, such as beta-oxidation and lipid biosynthesis. Recently, we demonstrated a striking structural similarity between its N-terminal domain and those of other membrane-related AAA-ATPases, such as valosine-containing protein (p97). The N-terminal domain of valosine-containing protein serves as an interface to its adaptor proteins p47 and Ufd1, whereas the physiologic interaction partner of the N-terminal domain of PEX1 remains unknown. Here we found that N-terminal domains isolated from valosine-containing protein, as well as from PEX1, bind phosphoinositides. The N-terminal domain of PEX1 appears to preferentially bind phosphatidylinositol 3-monophosphate and phosphatidylinositol 4-monophosphate, whereas the N-terminal domain of valosine-containing protein displays broad and nonspecific lipid binding. Although N-ethylmaleimide-sensitive fusion protein, CDC48 and Ufd1 have structures similar to that of valosine-containing protein, they displayed lipid specificity similar to that of the N-terminal domain of PEX1 in the assays. By mutational analysis, we demonstrate that a conserved arginine surrounded by hydrophobic residues is essential for lipid binding, despite very low sequence similarity between PEX1 and valosine-containing protein.     

磷缺失引起小麦叶片中脂含量的变化与脂的合成和磷脂酰甘油的降解有关

对生长在不同磷营养水平条件下小麦(Triticum aestivum var.Zhongyou 9507)叶片中光合膜脂含量变化的原因进行了研究.通过对生长在不同磷营养水平条件下9 d龄和16 d龄小麦叶片中光合膜脂含量的分析,发现在磷缺失培养条件下,小麦光合膜脂的相对含量发生了很大变化,这种变化与小麦叶龄密切相关.在16d龄小麦植株中,第一片叶为老叶,第二片叶为较老叶,而第三片叶为新叶,PG和MGDG在叶片中的相对含量从新叶到老叶逐渐下降,而DGDG和SQDG含量逐渐上升;在磷缺失条件下,16 d龄小麦第一叶片中PG的含量(2.5%)远远低于其在9 d龄第一叶片中的含量(5.5%).以上结果说明,磷缺失引起小麦叶片中脂含量的变化不仅与脂合成有关,而且与PG的降解有关;新生叶片中PG含量减少的主要原因是由于磷供应不足,从而影响了PG的合成;而PG的降解则是老叶中PG含量下降的主要原因.     

The influence of NADPH-dependent lipid peroxidation on the progesterone biosynthesis in human placental mitochondria.

In an in vitro system consisting of human term placental mitochondria and an NADPH-generating system plus Fe2+, significant lipid peroxidation was observed along with a concomitant inhibition of progesterone biosynthesis. This inhibition could be markedly blocked by Mn2+, superoxide dismutase and dimethylfuran, inhibitors of NADPH-dependent lipid peroxidation. In addition, it has been found that malondialdehyde formation is accompanied by a corresponding decrease in placental mitochondrial cytochrome P-450 content. Inhibitors of lipid peroxidation also prevent the loss of cytochrome P-450, further demonstrating a direct relationship between NADPH-dependent lipid peroxidation and degradation of cytochrome P-450 in cell-free systems. These measurements provide the first evidence that the inhibition of progesterone biosynthesis by a NADPH-dependent lipid peroxidation in placental mitochondria is a consequence of cytochrome P-450 degradation due to lipid peroxidation.     

Ancient ubiquitous protein 1 (AUP1) localizes to lipid droplets and binds the E2 ubiquitin conjugase G2 (Ube2g2) via its G2 binding region

Lipid droplets (LDs), the major intracellular storage sites for neutral lipids, consist of a neutral lipid core surrounded by a phospholipid monolayer membrane. In addition to their function in lipid storage, LDs participate in lipid biosynthesis and recently were implicated in proteasomal protein degradation and autophagy. To identify components of the protein degradation machinery on LDs, we studied several candidates identified in previous LD proteome analyses. Here, we demonstrate that the highly conserved and broadly expressed ancient ubiquitous protein 1 (AUP1) localizes to LDs, where it integrates into the LD surface in a monotopic fashion with both termini facing the cytosol. AUP1 contains a C-terminal domain with strong homology to a domain known as G2BR, which binds E2 ubiquitin conjugases. We show that AUP1, by means of its G2BR domain, binds to Ube2g2. This binding is abolished by deletion or mutation of the G2BR domain, although the LD localization of AUP1 is not affected. The presence of the AUP1-Ube2g2 complex at LDs provides a direct molecular link between LDs and the cellular ubiquitination machinery.