The conservation and status of threatened fishes in southern Africa

The conservation status of 24 threatened freshwater fishes and seven estuarine fishes from southern Africa is discussed against the background of natural and anthropogenic environmental factors. The majority of threatened species are endemic temperate forms with restricted ranges. Major threats include introduced alien fishes and a wide spectrum of environmentally destructive causes. Research on threatened species includes distribution surveys, biological and ecological studies and methods of artificial propagation. Long-term remedies based on ecosystem conservation are also being promoted. The perceptions and attitudes of nature conservation authorities are adjusting to the new challenges offish conservation. The number of threatened fishes in Africa is likely to increase in the face of escalating problems of habitat destruction and degradation.     

Conservation needs of amphibians in China: A review

The conservation status of all the amphibians in China is analyzed,and the country is shown to be a global priority for conservation in comparison to many other countries of the world.Three Chinese regions are particularly rich in amphibian diversity:Hengduan,Nanling,and Wuyi mountains.Sala-manders are more threatened than frogs and toads.Several smaller families show a high propensity to become seriously threatened:Bombinatoridae,Cryptobranchidae,Hynobiidae and Salamandridae.Like other parts of the world,stream-breeding,high-elevation forest amphibians have a much higher likeli-hood of being seriously threatened.Habitat loss,pollution,and over-harvesting are the most serious threats to Chinese amphibians.Over-harvesting is a less pervasive threat than habitat loss,but it is more likely to drive a species into rapid decline.Five conservation challenges are mentioned with recommendations for the highest priority research and conservation actions.     

Conservation needs of amphibians in China: A review

The conservation status of all the amphibians in China is analyzed, and the country is shown to be a global priority for conservation in comparison to many other countries of the world. Three Chinese regions are particularly rich in amphibian diversity: Hengduan, Nanling, and Wuyi mountains. Salamanders are more threatened than frogs and toads. Several smaller families show a high propensity to become seriously threatened: Bombinatoridae, Cryptobranchidae, Hynobiidae and Salamandridae. Like other parts of the world, stream-breeding, high-elevation forest amphibians have a much higher likelihood of being seriously threatened. Habitat loss, pollution, and over-harvesting are the most serious threats to Chinese amphibians. Over-harvesting is a less pervasive threat than habitat loss, but it is more likely to drive a species into rapid decline. Five conservation challenges are mentioned with recommendations for the highest priority research and conservation actions.     

Multiple drivers of decline in the global status of freshwater crayfish (Decapoda: Astacidea)

Rates of biodiversity loss are higher in freshwater ecosystems than in most terrestrial or marine ecosystems, making freshwater conservation a priority. However, prioritization methods are impeded by insufficient knowledge on the distribution and conservation status of freshwater taxa, particularly invertebrates. We evaluated the extinction risk of the world''s 590 freshwater crayfish species using the IUCN Categories and Criteria and found 32% of all species are threatened with extinction. The level of extinction risk differed between families, with proportionally more threatened species in the Parastacidae and Astacidae than in the Cambaridae. Four described species were Extinct and 21% were assessed as Data Deficient. There was geographical variation in the dominant threats affecting the main centres of crayfish diversity. The majority of threatened US and Mexican species face threats associated with urban development, pollution, damming and water management. Conversely, the majority of Australian threatened species are affected by climate change, harvesting, agriculture and invasive species. Only a small proportion of crayfish are found within the boundaries of protected areas, suggesting that alternative means of long-term protection will be required. Our study highlights many of the significant challenges yet to come for freshwater biodiversity unless conservation planning shifts from a reactive to proactive approach.     

New conservation status for data-deficient endemic mammals of East Africa

Knowing the exact status of several species is unimaginable since the data available is not adequate to determine their category, they are classified as Data Deficient (DD) by the IUCN. Lack of sufficient information impedes the assessment of conservation status for DD species and could lead to missing conservation opportunities for rare mammals under multiple threats. It seems appropriate that available knowledge of each species should be recorded now because the next few decades will see even more human-induced changes. The main objective is to suggest a strategic framework and establishing categories to help overcome the uncertainty regarding the conservation status of endemic mammals of East Africa. Preliminary extinction risk categories were determined based on the IUCN Red List Criterion B particularly of criteria B1 which uses the extent of occurrence. We use quantile regression to model a relationship between the time since species discovery (50 years as a reference) and log-transformed range-size of mammal species (1–20,000 km² area for a threatened category). Mammals that were described more than 50 years ago and have an EOO of less than 20,000 km² are categorized under threatened status. We found a significant positive relationship between time since species discovery and geographic range size of the non-DD mammal species for all quantile levels (p < 0.05) allowed the use of time since species discovery and geographic range size to infer the proper red list category of species. Only 16 endemic mammals currently listed as Data Deficient, should continue to be listed as so (group A). The remaining species should be re-listed as threatened (17 species) and as non-threatened (25 species, groups C and D). Our finding reduced the number of DD species of mammals of East Africa from 32.04% to 8.83%. As of the investigation of the present study, 12 (70.6%) mammals suggested for threatened categories are small-sized shrews and bats. DD species introduce greater uncertainty in estimates of overall extinction risk to the endemics, and by no means are they such species that can be considered low priorities for research. DD mammals may still face high extinction risks and may be more frequently threatened than successfully evaluated mammals. These findings may hopefully contribute to a more efficient allocation of conservation funds and more efficient development of conservation plans using data available for almost all mammalian species.     

Ecology and conservation of grassland birds in southeastern South America: a review

ABSTRACT The grasslands of southeastern South America (SESA), comprising one of the most extensive grassland ecosystems in the Neotropics, have been negatively impacted by the development of the livestock industry, arable agriculture, and forestry. SESA grasslands have a rich avifauna that includes 22 globally threatened and near‐threatened species, and many other species have suffered local population extinctions and range reductions. In addition to habitat loss and fragmentation, grassland birds in SESA are threatened by improper use of agrochemicals, unfavorable fire management regimes, pollution, and illegal capture and hunting. Studies to date have provided information about the distribution of grassland birds, the threats populations face, and the habitat requirements of some threatened species, but more information is needed concerning dispersal and migration patterns, genetics, and factors that influence habitat use and species survival in both natural and agricultural landscapes. There are few public protected areas in the region (1% of original grasslands), and many populations of threatened grassland birds are found on private lands. Therefore, efforts to preserve grassland habitat must reconcile the interests of land owners and conservationists. Current conservation efforts include establishment of public and private reserves, promotion of agricultural activities that reconcile production with biodiversity conservation, development of multilateral conservation projects across countries, and elaboration of action plans. Measures that result in significant losses to private land owners should include economic compensation, and use of economic incentives to promote agriculture and forestry in native grassland areas should be discouraged, especially in priority areas for grassland birds. Although more studies are needed, some actions, particularly habitat protection and improved management of public and private lands, should be taken immediately to improve the conservation status of grassland birds in SESA.     

Extinction Risks and the Conservation of Madagascar's Reptiles

Background

An understanding of the conservation status of Madagascar''s endemic reptile species is needed to underpin conservation planning and priority setting in this global biodiversity hotspot, and to complement existing information on the island''s mammals, birds and amphibians. We report here on the first systematic assessment of the extinction risk of endemic and native non-marine Malagasy snakes, lizards, turtles and tortoises.

Methodology/Principal Findings

Species range maps from The IUCN Red List of Threatened Species were analysed to determine patterns in the distribution of threatened reptile species. These data, in addition to information on threats, were used to identify priority areas and actions for conservation. Thirty-nine percent of the data-sufficient Malagasy reptiles in our analyses are threatened with extinction. Areas in the north, west and south-east were identified as having more threatened species than expected and are therefore conservation priorities. Habitat degradation caused by wood harvesting and non-timber crops was the most pervasive threat. The direct removal of reptiles for international trade and human consumption threatened relatively few species, but were the primary threats for tortoises. Nine threatened reptile species are endemic to recently created protected areas.

Conclusions/Significance

With a few alarming exceptions, the threatened endemic reptiles of Madagascar occur within the national network of protected areas, including some taxa that are only found in new protected areas. Threats to these species, however, operate inside and outside protected area boundaries. This analysis has identified priority sites for reptile conservation and completes the conservation assessment of terrestrial vertebrates in Madagascar which will facilitate conservation planning, monitoring and wise-decision making. In sharp contrast with the amphibians, there is significant reptile diversity and regional endemism in the southern and western regions of Madagascar and this study highlights the importance of these arid regions to conserving the island''s biodiversity.     

黄河流域淡水鱼类多样性和保护

本文介绍了黄河流域鱼类研究的历史、淡水鱼类的物种组成、整体分布格局、特有性、濒危性, 以及鱼类多样性在黄河上、中、下游等的特点。历史上对于黄河鱼类多样性的研究, 历经了四个阶段, 从最初的零星记录一直到现阶段的深入研究。综合历史记录和野外调查, 已知黄河流域分布的淡水鱼类共计147种, 隶属于12目21科78属, 其中鲤形目种类占据绝对优势。另外, 全流域黄河特有种计有27种, 受危物种24种, 分别占总数的18.37%和16.32%。同中国主要江河相比, 黄河鱼类在高级分类阶元上的多样性较高, 但物种多样性则处在较低水平; 尽管黄河特有鱼类和受危物种比例低于全国平均水平, 但上游特有鱼类和珍稀濒危鱼类的占比很高。目前黄河鱼类多样性大幅降低, 现状调查仅能采获历史记录种类的53.06%。梯级水电开发、水资源过度利用、外来物种、水域污染和过度捕捞都是威胁鱼类多样性的重要因素, 但对各河段和支流的影响不一, 应做出有针对性的保护部署。     

Genetic variability in maned wolf based on heterologous short-tandem repeat markers from domestic dog

The maned wolf (Chrysocyon brachyurus) is the largest South American canid. Habitat loss and fragmentation, due to agricultural expansion and predatory hunting, are the main threats to this species. It is included in the official list of threatened wildlife species in Brazil, and is also protected by IUCN and CITES. Highly variable genetic markers such as microsatellites have the potential to resolve genetic relationships at all levels of the population structure (among individuals, demes or metapopulations) and also to identify the evolutionary unit for strategies for the conservation of the species. Tests were carried out to verify whether a class of highly polymorphic tetranucleotide repeats described for the domestic dog effectively amplifies DNA in the maned wolf. All five loci studied were amplified; however, one of these, was shown to be monomorphic in 69 maned wolf samples. The average allele number and estimated heterozygosity per polymorphic locus were 4.3 and 67%, respectively. The genetic variability found for this species, which is considered threatened with extinction, showed similar results when compared to studies of other canids.     

A security game approach for strategic conservation against poaching considering food web complexities

Mitigating the poaching pressure on food webs under multiple constraints (including financial and ecological ones) remains an open problem within conservation. Within this field, mathematically modeling the effects of poaching threats on managerial decision-making is a novel approach. To fill this scientific gap, the present paper uses a security game approach to model the interactions between an environmental manager (defender) and a group of profit-seeking pursuit poachers (attackers) who target species which are nodes of the food web. Based upon the non-cooperative Stackelberg game, the objective of the defender (as leader) is to keep the food web at or near equilibrium through optimally manipulating the populations of an optimal subset of species. In contrast, each attacker strives to maximize monetary profit by hunting an optimal population size of the selected species. The model is validated by a numerical example examining the food web of the endangered Persian leopard (Panthera pardus saxicolor), which lives in Golestan National Park (GNP), Iran. The model provides an overarching biotic intervention strategy to keep the (1 predator-4 prey) food web near equilibrium, while only 2 prey species (the urial (Ovis vignei) and the red deer (Cervus elaphus)) are directly threatened by poachers. The examination revealed that both species population data and poaching data should be taken into account to set effective multi-species conservation prioritization levels. In a sensitivity analysis approach, it was found that, despite the fact that red deer is endangered and preferred by poachers, the deterrent penalty measure should be 1.5 times greater for poaching urial than red deer. The output analysis illustrated that, in order to bring the urial deterrent penalty measure closer to the red deer one, enforcement measures should be about 2.5 times stricter for poaching urial than red deer. The results specifically yield insight into how to optimally conserve a food web equilibrium under poaching pressure and within several constraints.     

DNA marker technology for wildlife conservation

Use of molecular markers for identification of protected species offers a greater promise in the field of conservation biology. The information on genetic diversity of wildlife is necessary to ascertain the genetically deteriorated populations so that better management plans can be established for their conservation. Accurate classification of these threatened species allows understanding of the species biology and identification of distinct populations that should be managed with utmost care. Molecular markers are versatile tools for identification of populations with genetic crisis by comparing genetic diversities that in turn helps to resolve taxonomic uncertainties and to establish management units within species. The genetic marker analysis also provides sensitive and useful tools for prevention of illegal hunting and poaching and for more effective implementation of the laws for protection of the endangered species. This review summarizes various tools of DNA markers technology for application in molecular diversity analysis with special emphasis on wildlife conservation.     

What hope for African primate diversity?

Available empirical evidence suggests that many primate populations are increasingly threatened by anthropogenic actions and we present evidence to indicate that Africa is a continent of particular concern in terms of global primate conservation. We review the causes and consequences of decline in primate diversity in Africa and argue that the major causes of decline fall into four interrelated categories: deforestation, bushmeat harvest, disease and climate change. We go on to evaluate the rarity and distribution of species to identify those species that may be particularly vulnerable to threats and examine whether these species share any characteristic traits. Two factors are identified that suggest that our current evaluation of extinction risk may be overly optimistic; evidence suggests that the value of existing forest fragments may have been credited with greater conservation value in supporting primate populations than they actually have and it is clear that the extinction debt from historical deforestation has not being adequately considered. We use this evaluation to suggest what future actions will be advantageous to advance primate conservation in Africa and evaluate some very positive conservation gains that are currently occurring.     

Phylogenetic analysis of conservation priorities for aquatic mammals and their terrestrial relatives, with a comparison of methods

Background

Habitat loss and overexploitation are among the primary factors threatening populations of many mammal species. Recently, aquatic mammals have been highlighted as particularly vulnerable. Here we test (1) if aquatic mammals emerge as more phylogenetically urgent conservation priorities than their terrestrial relatives, and (2) if high priority species are receiving sufficient conservation effort. We also compare results among some phylogenetic conservation methods.

Methodology/Principal Findings

A phylogenetic analysis of conservation priorities for all 620 species of Cetartiodactyla and Carnivora, including most aquatic mammals. Conservation priority ranking of aquatic versus terrestrial species is approximately proportional to their diversity. However, nearly all obligated freshwater cetartiodactylans are among the top conservation priority species. Further, ∼74% and 40% of fully aquatic cetartiodactylans and carnivores, respectively, are either threatened or data deficient, more so than their terrestrial relatives. Strikingly, only 3% of all ‘high priority’ species are thought to be stable. An overwhelming 97% of these species thus either show decreasing population trends (87%) or are insufficiently known (10%). Furthermore, a disproportional number of highly evolutionarily distinct species are experiencing population decline, thus, such species should be closely monitored even if not currently threatened. Comparison among methods reveals that exact species ranking differs considerably among methods, nevertheless, most top priority species consistently rank high under any method. While we here favor one approach, we also suggest that a consensus approach may be useful when methods disagree.

Conclusions/Significance

These results reinforce prior findings, suggesting there is an urgent need to gather basic conservation data for aquatic mammals, and special conservation focus is needed on those confined to freshwater. That evolutionarily distinct—and thus ‘biodiverse’—species are faring relatively poorly is alarming and requires further study. Our results offer a detailed guide to phylogeny-based conservation prioritization for these two orders.     

Analysing freshwater fish biodiversity records and respective conservation areas in Spain

The number of threatened freshwater fish species in Spain is among the highest recorded in Europe and includes a high percentage of endemic taxa. Investigated were the distribution of Spanish freshwater fish to identify priority areas for conservation and assess the extent to which freshwater fish are included in the existing network of protected areas. Considered were those threatened species recorded in the Spanish National inventories. From these data, several biodiversity indices were calculated and analysed. The results reveal important discrepancies between the national and international assessments of conservation status, whereby the current Spanish national catalogue needs updating to reconcile these inconsistencies. Several important areas for the conservation of freshwater fish lie outside protected areas. The results encourage the establishment of protected areas specifically for freshwater environments. An extensive database of Spanish freshwater fish species is needed to redefine priority areas and to maintain freshwater biodiversity.     

When the method for mapping species matters: defining priority areas for conservation of African freshwater turtles

Aim Defining priority areas for conservation is essential to minimize biodiversity loss, but the adoption of different methods for describing species distributions influences the outcomes. In order to provide a robust basis for the conservation of freshwater turtles in Africa, we compared the effect that different species‐mapping approaches had on derived patterns of species richness, species vulnerability and protected‐area representativeness. Location Africa. Methods We adopted three different approaches with increasing complexity for generating species distribution maps. The first approach was based on the geographic intersection of species records and grid squares; the second on the union of local convex polygons; and the third on inductive distribution modelling techniques. We used distribution maps, generated using these three approaches, to determine conservation priorities based on geographic patterns of species richness and vulnerability, as well as for conducting gap and irreplaceability analyses. Results We obtained markedly different distribution maps using the three methods, which in turn caused differences in conservation priorities. The grid‐square approach underestimated range sizes and species richness, while the polygon approach overestimated these attributes. The distribution modelling approach provided the most realistic outcome in terms of diversity patterns, by minimizing both commission and omission errors. An integrated map of conservation priority – derived by combining individual measures of priority based on the distribution modelling approach – identified the Gulf of Guinea coast and the Albertine Rift as major priority areas. Main conclusions Each species‐mapping approach has both advantages and disadvantages. The choice of the most appropriate approach in any given situation depends on the availability of locality records and on the relative importance of mitigating omission and commission errors. Our findings suggest that in most circumstances, the use of distribution modelling has many advantages relative to the other approaches. The priority areas identified in this study should be considered for targeting efforts to conserve Africa freshwater turtles in the coming years.     

Native or not? Tracing the origin of wild-caught and captive freshwater turtles in a threatened and widely distributed species (Emys orbicularis)

Pet and food trade are among the major threats for many chelonians species worldwide. We investigate the impact of the present and past trade in European pond turtles (Emys orbicularis, E. trinacris) on their extant distribution pattern. Using a comprehensive mtDNA dataset of cytochrome b haplotypes derived from more than 1,550 individuals, we assigned wild-caught allochthonous and captive turtles from six European countries to their native regions across the entire distribution range. We found allochthonous haplotypes in all countries surveyed, providing evidence of long-distance translocations owing to past and present trade, illegal poaching or collection by tourists. In summary, we identify source regions of allochthonous turtles and past and present trade routes. Moreover, we point out future directions which would contribute to conservation and management of these threatened species.     

Phenotypically linked dichotomy in sea turtle foraging requires multiple conservation approaches

Marine turtles undergo dramatic ontogenic changes in body size and behavior, with the loggerhead sea turtle, Caretta caretta, typically switching from an initial oceanic juvenile stage to one in the neritic, where maturation is reached and breeding migrations are subsequently undertaken every 2-3 years. Using satellite tracking, we investigated the migratory movements of adult females from one of the world's largest nesting aggregations at Cape Verde, West Africa. In direct contrast with the accepted life-history model for this species, results reveal two distinct adult foraging strategies that appear to be linked to body size. The larger turtles (n = 3) foraged in coastal waters, whereas smaller individuals (n = 7) foraged oceanically. The conservation implications of these findings are profound, with the population compartmentalized into habitats that may be differentially impacted by fishery threats in what is a global fishing hotspot. Although the protection of discrete areas containing coastal individuals may be attainable, the more numerous pelagic individuals are widely dispersed with individuals roaming over more than half a million square kilometers. Therefore, mitigation of fisheries by-catch for sea turtles in the east Atlantic will likely require complex and regionally tailored actions to account for this dichotomous behavior.     

Using the IUCN Red List to determine effective conservation strategies

Threatened species lists continue to grow while the world’s governments fail to meet biodiversity conservation goals. Clearly, we are failing in our attempts to conserve biodiversity. Yet 37 mammal species genuinely improved in status in the 2009 IUCN Red List, suggesting there are ways to successfully conserve biodiversity. Here, I compare the threats and conservation actions (proposed and implemented) by the expert assessors of the Red List of improving species to a further 144 declining mammal species to determine whether specific threats were more easily remedied, and whether certain conservation actions were more successful than others. Declining species were faced with different threatening processes to mammals improving in status suggesting some threats were easier to treat (e.g. hunting) than others (climate change, invasive species). Declining species had different proposed and implemented conservation actions than improving species suggesting some actions are more successful than others. Threatened species were invariably found in conservation areas, suggesting protected area creation alone is not an overly successful strategy for species at risk of extinction. Conservation actions were more frequently implemented for improving than declining species suggesting active conservation is effective in improving the status of biodiversity. There were significant differences between proposed and implemented conservation actions suggesting some actions are easier to implement than others. Reintroduction, captive breeding and hunting restriction were more effective in conserving mammals than site creation and invasive species control. These findings highlight effective conservation actions for mammals worldwide and allow the rationalisation of threat mitigation measures to ensure economically justifiable biodiversity conservation strategies.     

Strategies for the conservation of endangered freshwater pearl mussels (<Emphasis Type="Italic">Margaritifera margaritifera</Emphasis> L.): a synthesis of Conservation Genetics and Ecology

Freshwater pearl mussels (Margartifera margaritifera L.) are among the most critically threatened freshwater bivalves worldwide. The pearl mussel simultaneously fulfils criteria of indicator, flagship, keystone and umbrella species and can thus be considered an ideal target species for the process conservation of aquatic ecosystem functioning. The development of conservation strategies for freshwater pearl mussels and for other bivalve species faces many challenges, including the selection of priority populations for conservation and strategic decisions on habitat restoration and/or captive breeding. This article summarises the current information about the species’ systematics and phylogeny, its distribution and status as well as about its life history strategy and genetic population structure. Based on this information, integrative conservation strategies for freshwater mollusc species which combine genetic and ecological information are discussed. Holistic conservation strategies for pearl mussels require the integration of Conservation Genetics and Conservation Ecology actions at various spatial scales, from the individual and population level to global biodiversity conservation strategies. The availability of high resolution genetic markers for the species and the knowledge of the critical stages in the life cycle, particularly of the most sensitive post-parasitic phase, are important prerequisites for conservation. Effective adaptive conservation management also requires an evaluation of previous actions and management decisions. As with other freshwater bivalves, an integrative conservation approach that identifies and sustains ecological processes and evolutionary lineages is urgently needed to protect and manage freshwater pearl mussel diversity. Such research is important for the conservation of free-living populations, as well as for artificial culturing and breeding techniques, which have recently been or which are currently being established for freshwater pearl mussels in several countries.     

Global conservation priorities for marine turtles

Where conservation resources are limited and conservation targets are diverse, robust yet flexible priority-setting frameworks are vital. Priority-setting is especially important for geographically widespread species with distinct populations subject to multiple threats that operate on different spatial and temporal scales. Marine turtles are widely distributed and exhibit intra-specific variations in population sizes and trends, as well as reproduction and morphology. However, current global extinction risk assessment frameworks do not assess conservation status of spatially and biologically distinct marine turtle Regional Management Units (RMUs), and thus do not capture variations in population trends, impacts of threats, or necessary conservation actions across individual populations. To address this issue, we developed a new assessment framework that allowed us to evaluate, compare and organize marine turtle RMUs according to status and threats criteria. Because conservation priorities can vary widely (i.e. from avoiding imminent extinction to maintaining long-term monitoring efforts) we developed a “conservation priorities portfolio” system using categories of paired risk and threats scores for all RMUs (n = 58). We performed these assessments and rankings globally, by species, by ocean basin, and by recognized geopolitical bodies to identify patterns in risk, threats, and data gaps at different scales. This process resulted in characterization of risk and threats to all marine turtle RMUs, including identification of the world''s 11 most endangered marine turtle RMUs based on highest risk and threats scores. This system also highlighted important gaps in available information that is crucial for accurate conservation assessments. Overall, this priority-setting framework can provide guidance for research and conservation priorities at multiple relevant scales, and should serve as a model for conservation status assessments and priority-setting for widespread, long-lived taxa.