铁木属(桦木科)花序及花的形态发生

在扫描电镜下观察了桦木科(Betulaceae)铁木属花序和花的形态发生过程。结果显示, 铁木雌花序由多个小聚伞花序螺旋状排列组成。每个小花序原基分化出1枚初级苞片和一团小花序原基分生组织, 由小花序原基分生组织分化形成1对次级苞片和2个花原基, 每个花原基分化出2个或3个心皮原基, 形成二心皮或三心皮雌蕊, 雌蕊基部有1层环状花被原基。雄花序为柔荑状, 由多个小聚伞花序螺旋状排列组成。每个小花序原基分化出1枚初级苞片和一团小花序原基分生组织, 由小花序原基分生组织分化出3个花原基分区, 位于中央的花原基分区, 分化形成5-6枚雄蕊原基, 两侧的花原基分区, 分别分化形成3-4枚雄蕊原基, 雄蕊原基分化形成四药囊雄蕊。雄蕊原基纵裂, 但花丝纵裂没有达到基部。     

榛属 (桦木科) 花序及花的形态发生

在扫描电镜下观察了桦木科榛属榛、毛榛和滇榛的花序和花的形态发生过程。榛属雌花序由多个小聚伞花序螺旋状排列组成;每个小花序原基分化出1枚初级苞片和一团小花序原基分生组织,由小花序原基分生组织分化形成2个花原基;每个花原基分化出2个心皮原基,形成二心皮雌蕊;雌蕊基部有2层花被原基,内层花被原基环状,外层花被发生于花原基近轴面和远轴面,近轴面和远轴面的花被不均等分化,外层花被发生早于内层花被。雄花序为柔荑状,由多个小聚伞花序螺旋状排列组成。每个小花序原基分化出1枚初级苞片和一团小花序原基分生组织,由小花序原基分生组织分化出2枚次级苞片和4~6个雄蕊原基,形成4~6枚雄蕊,每个雄蕊具4个药囊,在雄蕊原基分化形成4药囊雄蕊过程中,出现雄蕊原基纵裂,并且花丝纵裂至基部。为进一步全面探讨桦木科属间系统演化关系提供了证据。     

杉科、柏科的系统发生分析——来自28S rDNA序列分析的证据

对杉科（Taxodiaceae）与柏科（Cupressaceae s.s.）的28S rRNA基因的部分序列（约630 bp）进行PCR扩增、序列测定和系统发生关系分析,用简约法和邻接法构建的系统发生树基本一致。结果表明,杉科与柏科构成一个单系群,支持将杉科、柏科（Sciadopitys除外）合并为一个科——广义柏科（Cupressaceae sensu lato）的观点。在广义柏科中,Taiwania、Athrotaxis分别形成一支系;Metasequoia、Sequoia、Sequoiadendron关系较近,聚成一支系; Taxodium、Glyptostrobus、Cryptomeria聚成一支系;柏科聚成一支系。这一分析结果与叶绿体基因序列的分析结果相吻合,但是由于28S rRNA基因的进化速率较慢,尚不能分辨上述各个支系之间的系统演化关系。 Abstract:DNA sequences from 28S rDNA were used to assess relationships between and within traditional Taxodiaceae and Cupressaceae s.s.The MP tree and NJ tree generally are similar to one another.The results show that Taxodiaceae and Cupressaceae s.s.form a monophyletic conifer lineage excluding Sciadopitys.In the Taxodiaceae-Cupressaceae s.s.monophyletic group,the Taxodiaceae is paraphyletic.Taxodium,Glyptostrobus and Cryptomeria forming a clade(Taxodioideae),in which Glyptostrobus and Taxodium are closely related and sister to Cryptomeria;Sequoia,Sequoiadendron and Metasequoia are closely related to each other,forming another clade (Sequoioideae),in which Sequoia and Sequoiadendron are closely related and sister to Metasequoia;the seven genera of Cupressaceae s.s.are found to be closely related to form a monophyletic lineage (Cupressoideae).These results are basically similar to analyses from chloroplast gene data.But the relationships among Taiwania,Sequoioideae,Taxodioideae,and Cupressoideae remain unclear because of the slow evolution rate of 28S rDNA,which might best be answered by sequencing more rapidly evolving nuclear genes.     

杉科、柏科的系统发生关系研究进展

杉科、柏科是松柏类裸子植物中的重要类群,其系统分类研究一直是裸子植物的研究热点之一.但是杉科与柏科之间及其内部各属之间的系统发生关系却一直存在争议.一般认为杉科、柏科单独成科.近年来的分子系统学及分支系统学研究结果证实:除了金松属以外,杉科和柏科为一单系群,应合并为一个科Cupres-saceae sensu　lato（广义柏科）,其主要分支类群的系统发生关系也已经基本确立,而金松属则单独成立金松科.     

Phylogenetic Relationships of the Perciform Genera of the Family Carangidae

A cladistic analysis of all known genera in the Carangidae was made mostly on the basis of external and osteological characters. Polarity for each character was determined by outgroup comparison using the echeneoids as the first outgroup and the Nematistiidae as the second. In the Carangini, there were four hypothesized monophyletic groups at the rank of sub-tribe. Parastromateus is the sister group of the remaining twenty-one carangine genera which are divided into three groups. The first group consists of a single genus Megalaspis. The second group is composed of Trachurus, Decapterus, Selar, Atule, Selaroides, Pantolabus, Alepes, Hemicaranx, Pseudocaranx, Kaiwarinus, and Chloroscombrus. The third group comprises Uraspis Caranx, Gnathanodon, Carang ichthys, Carangoides, Atropus, Ulua, Alectis, and Selene.     

Phylogenetic Relationships of Five Asian Schilbid Genera Including Clupisoma (Siluriformes: Schilbeidae)

The phylogenetic relationships of Asian schilbid catfishes of the genera Clupisoma, Ailia, Horabagrus, Laides and Pseudeutropius are poorly understood, especially those of Clupisoma. Herein, we reconstruct the phylogeny of 38 species of catfishes belonging to 28 genera and 14 families using the concatenated mitochondrial genes COI, cytb, and 16S rRNA, as well as the nuclear genes RAG1 and RAG2. The resulting phylogenetic trees consistently place Clupisoma as the sister taxon of Laides, and the five representative Asian schilbid genera form two monophyletic groups with the relationships (Ailia (Laides, Clupisoma)) and (Horabagrus, Pseudeutropius). The so-called “Big Asia” lineage relates distantly to African schilbids. Independent analyses of the mitochondrial and nuclear DNA data yield differing trees for the two Asian schilbid groups. Analyses of the mitochondrial gene data support a sister-group relationship for (Ailia (Laides, Clupisoma)) and the Sisoroidea and a sister-taxon association of (Horabagrus, Pseudeutropius) and the Bagridae. In contrast, analyses of the combined nuclear data indicate (Ailia (Laides, Clupisoma)) to be the sister group to (Horabagrus, Pseudeutropius). Our results indicate that the Horabagridae, recognized by some authors as consisting of Horabagrus, Pseudeutropius and Clupisoma does not include the latter genus. We formally erect a new family, Ailiidae fam. nov. for a monophyletic Asian group comprised of the genera Ailia, Laides and Clupisoma.     

中国小蜂科属间系统发育关系分析(膜翅目:小蜂科)

利用Hennig86程序的nelsen合意和Phylip程序的多数规则合意2种支序分析方法,探讨了中国小蜂科的系统发育关系。基于中国21属的30个性状,计算得到2个合意树,其分类系统与传统分类系统基本保持一致。在进化关系和亲缘关系上表现为:小蜂属(Chalcis)、卡诺小蜂属(Conura)、大腿小蜂属(Brachymeria)和脊柄小蜂属(Epitranus)相对最为原始,而泰内小蜂属(Tainaniella)和背突小蜂属(Oxycoryphe)相对最为进化,前者和后者之间的亲缘关系最远;亲缘关系最近的有:泰内小蜂属(Tainaniella)和背突小蜂属(Oxycoryphe),泊卡小蜂属(Proconura)和日本小蜂属(Nipponochalcidia),小蜂属(Chalcis)和卡诺小蜂属(Conura)以及细尾小蜂属(Megalocolus)和三角小蜂属(Trigonura),它们分别构成姊妹群关系。     

Phylogenetic Implications of Phasmid Absence in Males of Three Genera in Heteroderinae

Absence of the phasmid was demonstrated with the transmission electron microscope in immature third-stage (M3) and fourth-stage (M4) males and mature fifth-stage males (M5) of Heterodera schachtii, M3 and M4 of Verutus volvingentis, and M5 of Cactodera eremica. This absence was supported by the lack of phasmid staining with Coomassie blue and cobalt sulfide. All phasmid structures, except the canal and ampulla, were absent in the postpenetration second-stage juvenile (J2) of H. schachtii. The prepenetration V. volvingentis J2 differs from H. schachtii by having only a canal remnant and no ampulla. This and parsimonious evidence suggest that these two types of phasmids probably evolved in parallel, although ampulla and receptor cavity shape are similar. Absence of the male phasmid throughout development might be associated with an amphimictic mode of reproduction. Phasmid function is discussed, and female pheromone reception ruled out. Variations in ampulla shape are evaluated as phylogenetic character states within the Heteroderinae and putative phylogenetic outgroup Hoplolaimidae.     

基于mtDNA-COII基因部分序列探讨蟋蟀科五属的进化关系(直翅目:蟋蟀科)

采用DNA测序技术并比较了蟋蟀科5个属:斗蟋属Velarifictorus、棺头蟋属Loxoblemmus、油葫芦属Teleogryllus、灶蟋属Gryllodes和蟋蟀属Gryllus以及蛉蟋科针蟋亚科Allonemobiussocius的mtDNA-COII基因部分序列,依据分子数据建立了5个属的系统发育关系。结果显示A、T、C和G碱基含量分别为34.8%、35.3%、19.3%和10.6%,AT含量(70.1%)仅略高于半翅目锥猎蝽和缨尾目。分子系统树显示,油葫芦属黄脸油葫芦与蟋蟀属家蟋亲缘关系较近。显示油葫芦属与斗蟋属的亲缘关系较近。并且,棺头蟋属的多伊棺头蟋和窃棺头蟋先聚合,这与形态学特征的结果相符。     

Comparative Morphology of Echinoderm Sperm and Possible Phylogenetic Implications

The sperm morphology of at least 7 crinoids, 11 ophiuroids,23 asteroids, 23 holothuroids, and 37 echinoids is known. Forall the known crinoids, ophiuroids, and asteroids, the spermare spherical, while those of echinoids are conical. Holothuroidsperm are basically spherical, with two exceptions: cylindricalin Cucumaria lubrica and tabloid in Cucumaria pseudocurata.The possible implications of sperm morphology in the mode offertilization and in echinoderm phylogeny are discussed.     

Comparative Morphology of Tube Feet Among the Asteroidea: Phylogenetic Implications

Tube-foot morphology has been included among a variety of taxonomiccriteria for the Asteroidea over the past twenty-five years.Other than a few families belonging to the order Paxillosida,which are thought to have pointed, non-suckered tube feet thatare used for digging and burial in soft sediments, the presumptionhas been that asteroids have flat-tipped, suckered tube feet.This has become an accepted model despite the fact that thecomparative morphology of asteroid tube feet has not been considered.In the present study we examine tube-foot morphology of 45 speciesof Asteroidea representing 19 families. Our analysis confirmsthat members of the Luidiidae and Astropectinidae (order Paxillosida)lack suckers on the tips of their pointed tube feet. We demonstratethat there is considerable variation in tube-foot morphologyamong members of the Asteroidea including an entirely new typeof flat-tipped, non-suckered tube foot in species belongingto the order Valvatida. The external morphology of tube feetin species belonging to the order Velatida could not be distinguishedfrom "typical" flat-tipped, suckered tube feet; nonetheless,histological sections revealed a distinctive internal morphology.Finally, we report the first observations of the tube-foot morphologyof representatives of deep-sea asteroids belonging to the ordersNotomyotida and Brisingida, a group that also lacks the typicalflat-tipped, suckered tube-foot morphology. The results of ourstudy demonstrate that the current tube-foot morphology modelneeds to be reconsidered, as there is considerably greater variationthan was previously believed to be the case. Moreover, we concludethat while tube-foot morphologies show consistent similaritieswithin orders, tube-foot morphology is less appropriate as ataxonomic character below this level.     

Phylogenetic Relationships among the True Porpoises (Cetacea: Phocoenidae)

Portions of the cytochrome b gene and control region of the mitochondrial DNA molecule were sequenced to investigate systematic relationships among the six extant species of true porpoises, (Cetacea: Phocoenidae). Phylogenetic analyses of mitochondrial cytochrome b sequences support a close relationship between Burmeister′s porpoise, Phocoena spinipinnis, and the vaquita, Phocoena sinus, and the association of these two species with the spectacled porpoise, Australophocaena dioptrica. The latter result is not in concordance with a recent morphological reclassification which groups A. dioptrica with Dall′s porpoise, Phocoenoides dalli, in the subfamily Phocoenoidinae. The molecular analysis found no support for this grouping. A dioptrica was originally described as a member of the genus Phocoena, and our results support returning it to that genus at this time. Finally, the data suggest that the tropical species Neophocaena phocaenoides, the finless porpoise, may represent the most basal member of the family. The control region sequences corroborated the relationships among the closely related taxa P. sinus, P. spinipinnis, and A. dioptrica, but were unable to resolve the deeper branches of the tree, probably as a result of a high level of saturation of these sequences.     

Inflorescence and Flower Development of Globba barthei ( Zingiberaceae)

Inflorescence of Globba barthei is a thyrse . Primary bracts are initiated in a spiral phyllotactic pattern on the inflorescence apex . Cincinnus primordia are initiated in the axils of primary bracts . These promordia develop secondarybracts and floral primordia . The floral primordium continues to enlarge and produce a ring primordium . Sepals are initiated sequentially from the rounded corner of the primordium . The ring primordium separates three common primordium surrounding a central cavity . The adaxial common primordium is the first to separate . This primordium divides transversely and producespetal and fertile stamen . The remaining two common primordium transversely separate and produce respectively a petal and a petaloid . As the flower developing , the cavity of the floral cup becomes triangular . The angles of this triangle are the sites of outer androecial primordium . The abaxial androecia forms slightly earlier than the two adaxial ones, and then this primordium ceases growth soon . The two posterior primordia continue growth to produce the lateral petaloid staminodes . During this stage , gynoecia initiate from the floral cup and continue to fuse and develop into style and stigma. In addition ,Initiation of the bulbil primordium is observed at base of inflorescence axis during the early floral development . The bulbil primordium initiates in the axil of primary bract . The evolutionary significance of six androecia is discussed .     

基于16S rRNA序列的角蟾科部分属间系统关系

采用最大似然法(ML法)、最大简约法(MP法)、邻接法(NJ法)对来自角蟾科Megophryidae(Anura)8属17种及外群2种共25条400bp左右的线粒体16S rRNA序列进行系统发育关系分析。结果表明,用于分析的所有角蟾科物种形成两大支,第一支包括Megophrys,Brachytarsophrys和Atympanophrys,第二支包括Leptobrachium,Leptolalax,Scutiger,Oreolalax和Vibrissaphora。支持将角蟾科划分为两大类群,即第一支属于Megophryini族．第二支属于Leptobrachiini族。根据分子钟模型初步推测两类群问的分歧时间大致为14．2～18．7百万年前。在Megophryini族中,基因树的拓扑结构不支持Atympanophrys建立后的Megophrys为单系;而在Leptobrachiini族中,Leptolalax为一有效属,其系统发生较早。     

毛舞花姜花器官的发生与发育

通过扫描电镜观察了毛舞花姜(Globba barthei Gagne p.)的花序及花器官的发生与发育。3枚萼片原基首先于花顶连续发生,随后花顶的中心凹陷形成环状原基,环状原基进一步分化形成三枚花瓣—雄蕊共同原基,并在花顶的中心形成花杯。共同原基分化形成花瓣和三枚内轮雄蕊,紧接着外轮雄蕊在花杯的顶点发生。远轴的两枚内轮雄蕊延伸生长并相互融合形成了唇瓣,近轴的一枚形成了可育雄蕊;近轴的两枚外轮雄蕊发育形成了成熟花结构中的侧生退化雄蕊,而远轴的一枚缺失。近轴的两枚外轮雄蕊原基起始的同时,3枚心皮原基也在中心花杯的内侧发生而后与外轮雄蕊相间排列。对毛舞花姜花序的发生和发育的观察发现,在花序轴的头几片初级苞片中产生的是珠芽原基而非蝎尾状小花序原基,其形态特征类似于早期的蝎尾状小花序原基,由此推测珠芽很可能是蝎尾状小花序的变异。     

Corroboration among Data Sets in Simultaneous Analysis: Hidden Support for Phylogenetic Relationships among Higher Level Artiodactyl Taxa

In the taxonomic congruence approach to systematics, data sets are analyzed separately, and corroboration among data sets is indicated by replicated components in topologies derived from the separate analyses. By contrast, in the total evidence and conditional combination approaches, characters from different data sets are mixed in combined phylogenetic analyses. In optimal topologies derived from such simultaneous analyses, support for a particular node may be attributed to one, some, or all of the individual data sets. Partitioned branch support (PBS) is one technique for describing the distribution of character support and conflict among data sets in simultaneous analysis. PBS is analogous to branch support (BS), but recognizes hidden support and conflicts that emerge with the combination of characters from different data sets. For both BS and PBS, support for a particular node is interpreted as the difference in cost between optimal and suboptimal topologies. A different measure, the clade stability index (CSI), assesses the robustness of a particular node through the successive removal of characters. Here, we introduce variations of the CSI, the data set removal index (DRI) and nodal data set influence (NDI), that indicate the stability of a particular node to the removal of entire data sets. Like PBS, the DRI and NDI summarize the influence of different data sets in simultaneous analysis. However, because these new methods and PBS use different perturbations to assess stability, DRI and NDI scores do not always predict PBS scores and vice versa. In this report, the DRI and NDI are compared to PBS and taxonomic congruence in a cladistic analysis of 17 data sets for Artiodactyla (Mammalia). Five indices of hidden support and conflict are defined and applied to the combined artiodactyl character set. These measures identify substantial hidden support for controversial relationships within Artiodactyla. Hidden character support is ignored in the taxonomic congruence approach to systematics, but the DRI, NDI, and PBS utilize this cryptic information in estimates of support among data sets for a given node.     

Phylogenetic and Evolutionary Relationships among Yellow Fever Virus Isolates in Africa

Previous studies with a limited number of strains have indicated that there are two genotypes of yellow fever (YF) virus in Africa, one in west Africa and the other in east and central Africa. We have examined the prM/M and a portion of the E protein for a panel of 38 wild strains of YF virus from Africa representing different countries and times of isolation. Examination of the strains revealed a more complex genetic relationship than previously reported. Overall, nucleotide substitutions varied from 0 to 25.8% and amino acid substitutions varied from 0 to 9.1%. Phylogenetic analysis using parsimony and neighbor-joining algorithms identified five distinct genotypes: central/east Africa, east Africa, Angola, west Africa I, and west Africa II. Extensive variation within genotypes was observed. Members of west African genotype II and central/east African genotype differed by 2.8% or less, while west Africa genotype I varied up to 6.8% at the nucleotide level. We speculate that the former two genotypes exist in enzootic transmission cycles, while the latter is genetically more heterogeneous due to regular human epidemics. The nucleotide sequence of the Angola genotype diverged from the others by 15.7 to 23.0% but only 0.4 to 5.6% at the amino acid level, suggesting that this genotype most likely diverged from a progenitor YF virus in east/central Africa many years ago, prior to the separation of the other east/central African strains analyzed in this study, and has evolved independently. These data demonstrate that there are multiple genotypes of YF virus in Africa and suggest independent evolution of YF virus in different areas of Africa.     

基于12S rRNA和16S rRNA基因序列探讨中国蚤蝇科部分属间的系统发育关系

基于线粒体12S rRNA和16S rRNA基因序列联合分析,采用最大简约法、最大似然法和贝叶斯法分别构建了中国蚤蝇科14属的系统发育树.结果表明:联合分析序列总长度为819 bp,其中可变位点277个,简约信息位点200个;A+T平均含量为77.7%,具A、T偏倚性.系统发育分析显:中国蚤蝇科为单系发生,分为蚤蝇亚科和裂蚤蝇亚科两个单系群.蚤蝇亚科内脉蚤蝇属、锥蚤蝇属和刺蚤蝇属亲缘关系较近,栅蚤蝇属与栓蚤蝇属亲缘关系较近;裂蚤蝇亚科中虼蚤蝇属与裂蚤蝇属互为姐妹群,寡蚤蝇属与伐蚤蝇属互为姐妹群.     

Floral Initiation and Inflorescence Architecture: A Comparative View

Annals of Botany 100: 659–676, 2007 The     

Phylogenetic uncertainty revisited: Implications for ecological analyses

Ecologists and biogeographers usually rely on a single phylogenetic tree to study evolutionary processes that affect macroecological patterns. This approach ignores the fact that each phylogenetic tree is a hypothesis about the evolutionary history of a clade, and cannot be directly observed in nature. Also, trees often leave out many extant species, or include missing species as polytomies because of a lack of information on the relationship among taxa. Still, researchers usually do not quantify the effects of phylogenetic uncertainty in ecological analyses. We propose here a novel analytical strategy to maximize the use of incomplete phylogenetic information, while simultaneously accounting for several sources of phylogenetic uncertainty that may distort statistical inferences about evolutionary processes. We illustrate the approach using a clade‐wide analysis of the hummingbirds, evaluating how different sources of uncertainty affect several phylogenetic comparative analyses of trait evolution and biogeographic patterns. Although no statistical approximation can fully substitute for a complete and robust phylogeny, the method we describe and illustrate enables researchers to broaden the number of clades for which studies informed by evolutionary relationships are possible, while allowing the estimation and control of statistical error that arises from phylogenetic uncertainty. Software tools to carry out the necessary computations are offered.