The radiation resistance of ascospores and sclerotia of Pyronema domesticum

The Food and Drug Administration has become aware of several instances where supposedly sterile medical surgical products made of Chinese cotton have been found to contain viable Pyronema domesticum. The aim of this research was to determine the gamma and electron beam radiation resistance values for the two dormant phases (ascospores and sclerotia) of P. domesticum. The resistance values were obtained by developing a standardized system to cultivate, purify, and harvest biological indicators containing sclerotia or ascospores. Ascospores were more resistant to radiation than sclerotia. The D ₁₀ values for sclerotia were 0.79 and 1.09 kGy for strains 32030 and 14881, respectively. The resistance value for wild type ascospores was 2.83 kGy. The current standard for assuring radiation sterilization of medical devices is ISO 11137. This standard was developed to address the propensity for highly radiation-resistant organisms such as P. domesticum. Prior to the standard, biological indicators such as Bacillus pumilus, having a nominal D ₁₀ value or 1.7 kGy, were used to determine the sterility of many medical devices. Journal of Industrial Microbiology & Biotechnology (2002) 29, 51–54 doi:10.1038/sj.jim.7000267 Received 09 October 2001/ Accepted in revised form 08 April 2002     

Rapid viability assessment of spores of several fungi by an ionic intensified fluorescein diacetate method

Fluorescein diacetate (FDA) was applied to the viability assessment of spores of Aspergillus niger, Rhizopus stolonifer, Fusarium oxysporum, and Penicillium citrinum. The fluorescence of individual cells was quantitated with a charge coupled device (CCD) detector. When staining was carried out in a phosphate buffer solution (10 mM, pH 7.0), weak or no fluorescence was emitted from viable spores of A. niger and R. stolonifer, which made it difficult to distinguish between viable (nontreated) and nonviable (heat treated at 90°C for 30 min) spores. The addition of NaCl, KCl, or MgCl₂ to the staining solution caused an increase in the fluorescence intensity of A. niger viable spores, from which nonviable spores could be distinguished. The same effect of NaCl was observed in staining the spores of other species.     

FLOW CYTOMETRIC APPLICABILITY OF FLUORESCENT VITALITY PROBES ON PHYTOPLANKTON1

The applicability of six fluorescent probes (four esterase probes: acetoxymethyl ester of Calcein [Calcein‐AM], 5‐chloromethylfluorescein diacetate [CMFDA], fluorescein diacetate [FDA], and 2′,7′‐dichlorofluorescein diacetate [H₂DCFDA]; and two membrane probes: bis‐(1,3‐dibutylbarbituric acid) trimethine oxonol [DiBAC₄(3)] and SYTOX‐Green) as vitality stains was tested on live and killed cells of 40 phytoplankton strains in exponential and stationary growth phases, belonging to 12 classes and consisting of four cold‐water, 26 temperate, and four warm‐water species. The combined live/dead ratios of all six probes indicated significant differences between the 12 plankton classes (P < 0.01) and between individual species (P < 0.05). No specific differences were observed among strains of one species, among species or strains from different origin, nor between cells in exponential and stationary growth phase except for FDA. FDA showed a significant (P < 0.05) drop of <20% in fluorescence intensity in stationary cells. Of the four esterase probes, the live/dead ratios of FDA and CMFDA were not significantly different from each other, and both performed better than Calcein‐AM and H₂DCFDA (P < 0.001). Of the two membrane probes, DIBAC₄(3) stained rhodophytes and euglenophytes much better than SYTOX‐Green. The 13 algal strains best stainable (high live/dead ratios) among all six probes belonged to nine genera from six classes of phytoplankton. In conclusion, FDA, CMFDA, DIBAC₄(3), and SYTOX‐Green represent a wide choice of vitality probes in the study of phytoplankton ecology, applicable in many species from different algal classes, originating from different regions and at different stages of growth.     

Effect of environmental conditions on sclerotia and cleistothecia production in aspergillus

Summary Literature pertaining to sclerotial Aspergilli has been reviewed in brief. Observations on the effect of certain environmental conditions viz. pH, light, temperature of incubation, oxygen-deficient conditions and various relative humidity values on sclerotia production byAspergillus niger van Tieghem, (two strains),A. flavus Link (two strains),A. sclerotiorum Hüber (one strain) andA. paradoxus Fennell &Raper (one strain) and on cleistothecia production byA. nidulans (Eidam)Wint. (one strain) have been presented. Optimum pH for sclerotia or cleistothecia production was 7.5. In other respects sclerotia and cleistothecia behaved similarly. In general, condition showing maximum sclerotia or cleistothecia production was the one that showed maximum vegetative growth. Certain strains of the same species reponded differently to the same condition. Light completely inhibited sclerotia formation in one strain ofA. flavus. InA. paradoxus, in general, conditions favouring sclerotia production were those that inhibited (or retarded) the formation of conidial heads and the yellow pigment in the medium. Oxygen-deficient conditions inhibited or retarded sclerotia or cleistothecia formation. Production of sclerotia and cleistothecia increased with an increase in relative humidity values. No definite correlation could be observed between extent of sporulation and sclerotia or cleistothecia production except in case of relative humidity. Parallelism in the behaviour of sclerotia and cleistothecia production inAspergillus lends further support in favour of the hypothesis that in this genus sclerotia are sterile stromata.     

Biological Control Agents in Combination with Fertilization or Fumigation to Reduce Sclerotial Viability of Sclerotium rolfsii and Disease of Snap Beans in the Greenhouse

The use of biological control agents in combination with fertilization or fumigation to reduce sclerotial viability of Sclerotium rolfsii and the disease it causes on snap bean was investigated in the greenhouse. The fertilizers ammonium sulphate [(NH₄)₂SO₄], ammonium nitrate (NH₄NO₃), diammonium phosphate [(NH₄)₂HPO₄], or urea applied to soil at a field rate of 135 kg/ha, 15 cm deep of nitrogen (N) (0.09 mg of N/g) or Gliocladium virens (Gl-3) biomass at a rate of 7.5 kg/ha, 15 cm deep (0.05 mg/g) did not reduce the viability of sclerotia of S. rolfsii (Sr-1) when each was applied alone. However, treatment with fertilizer together with the low rate of Gl-3 biomass significantly reduced the sclerotial viability. The treatments that were effective in reducing the viability by more than 75% were the application of (NH₄)₂SO₄ or (NH₄)₂PO₄ and the low rate of Gl-3 biomass. Application of the high rate (0.25 mg/g) of Gl-3 biomass alone only reduced the sclerotial viability by 25%. The addition of any of the fertilizers with the low rate of biomass generally resulted in bean seed germination in the pathogen-infested soil that was higher than that achieved with each individual component. The disease severity (DSI) on beans was appreciable (<3.0) in pathogen-infested soil treated with or without the fertilizer (NH₄)₂SO₄ and in pathogen-infested soil without fertilizer but with a low rate of Gl-3. However, in pathogen-infested soil treated with the fertilizer and the low rate of Gl-3 biomass together, the disease was reduced to a DSI value of less than 1.0. In fumigation studies with metham sodium (Vapam), a dose-response study to investigate the viability of sclerotia of S. rolfsii (Sr-3) indicated that fumigant rates of less than 23.3 μ g/g of soil were sublethal. It was also shown that 5.4 μ g/g of metham sodium was inhibitory to Gl-3 biomass but not to conidia. Consequently, the conidia of isolates Gl-3, Thm-4 of Trichoderma hamatum, and Tv-1 of Trichoderma viride were used together with metham sodium at 17.1 μ g/g of soil. Conidia that were applied to the soil 2 days prior to metham sodium reduced the viability of sclerotia more than each individual component. The results of this study suggest the feasibility of effective disease reduction with an approach utilizing biological control in combination with fertilization or fumigation.     

Study on pectinase and sclerotium producing abilities of two kinds ofAspergillus flavus isolates from Zhejiang

Pectinase and sclerotium production by strains ofAspergillus flavus were determined with a pectinase culture plate assay and a Cz 3% NaNO₃ medium plate assay. In theA. flavus population, 51% of isolates produced sclerotia, the toxigenic strains showing a tendency to have smaller sclerotia. Strains producing both abundant small sclerotia and a large quantity of aflatoxin were not found. There was no linear correlation between the amount of aflatoxin produced and the number of sclerotia. Levels of pectinase produced by the toxigenic strains were higher than that of the non-toxigenic strains, and this character was more obvious in the sclerotium-producing strains than in the non-sclerotium-prodcing strains. In theA. flavus population from Zhejiang in which the toxigenic strain rate was low, toxigenic strains may require higher levels of pectinase to compete with the non-toxigenic strains when infecting foodstuffs.     

Technical aspects of the use of 3′,6′-diacetyl fluorescein for vital fluorescent staining of bacteria

Viable bacteria of several species have the capability to incorporate 3′,6′-diacetyl fluorescein (FDA) and rapidly hydrolyze it to fluorescein, which is stored intracellularly. However, several strains of viableEscherichia coli andAlcaligenes faecalis do not evolve and accumulate significant amounts of fluorescein when incubated on glass slides in the presence of FDA. In the present study, 10⁵–10⁷ E. coli orA. faecalis bacteria (viability more than 95%) were accumulated in separate experiments on 0.45-μm membrane filters and then stained for 5–10 min with FDA diluted immediately before use in phosphate-buffered saline, freshly prepared nutrient broth, or nutrient broth preconditioned by overnight growth of the respective bacteria. It was shown that in all cases about 20% of the bacteria did evolve significant amounts of fluorescein, thus enabling a visual observation of these cells in the fluorescence microscope.Bacillus cereus bacteria—that evolved and accumulated fluorescein on glass slides—were shown to be fluorescent on membrane filters after FDA staining. 100%, 40%, or 70% of the bacteria were stained if the FDA solution used had been prepared in nutrient broth preconditioned by overnight growth of the same bacteria, fresh nutrient broth, or phosphate-buffered saline, respectively. This preliminary study indicates the necessity of determining the technical conditions required for FDA staining for each bacterial species under study.     

Carpogenic Germination of Sclerotia of Sclerotinia sclerotiorum after Periods of Conditioning in Soil

Periods of conditioning in soil reduced the length of the resting period needed before sclerotia of Sclerotinia sclerotiorum could germinate to form apothecia. Curves for germination of sclerotia were fitted by a form of the log-logistic equation and from this equation the time taken for 50% germination (x₅₀) was calculated. These x₅₀ values were used as the basis for comparing germinability of sclerotia collected from infected sunflower plants and others conditioned in soil, or moist vermiculite for various times. Sclerotia from sunflower roots germinated sooner than those from the stem cavities. Germinability increased with the length of the conditioning period. Conditioning in soil was more effective than in moist vermiculite.     

Characterization of aflatoxigenic and non-aflatoxigenic <Emphasis Type="Italic">Aspergillus flavus</Emphasis> isolates from pistachio

Pistachio is a popular snack food. Aflatoxin contamination of pistachio nuts is a serious problem for many producing countries. The development of biological control methods based on ecological parameters is an environmentally friendly approach. Thirty-eight Aspergillus flavus isolates collected from a pistachio orchard in California (CA) were analyzed for production of aflatoxin (AF), cyclopiazonic acid (CPA), vegetative compatibility groups (VCGs), and mating types. All aflatoxigenic isolates produced both AFB₁ and CPA. The most toxigenic one was CA28 which produced 164 μg AFB₁ per 5 ml PDA fungal culture and small sclerotia (S strain, sclertoium size less than 400 μm). The other aflatoxigenic strains produce AFB₁ ranging from 1.2 μg to 80 μg per 5 ml fungal culture. Twenty-one percent of the CA isolates produced AFB₁, 84% produced CPA and half formed sclerotia on at least one of three tested media. The 38 CA isolates formed 26 VCGs, 6 of which had two or more isolates and 20 contained single isolates. The S strain isolates belong to 4 different VCGs. Genomic profiling by a retrotransposon DNA probe revealed fingerprint patterns that were highly polymorphic. The predicted VCGs (Pred-VCGs) based on a similarity coefficient >80% matched the VCGs of multiple isolates determined by complementation. All isolates within a VCG had the same mating-type gene of either MAT1-1 or MAT1-2. Uncorrected and VCG-corrected MAT1-1 and MAT1-2 among the isolates were equally distributed.     

Populations of bacteria and actinomycetes associated with sclerotia ofPhymatotrichum omnivorum buried in Houston black clay

Sclerotia ofPhymatotrichum omnivorum (Shear) Duggar (the causal agent of root rot of cotton) were produced in the laboratory and then buried at a depth of 45 cm at three sites in Texas situated on Houston black clay soils with various cropping histories. The sites included a native grassland prairie, a field in continuous cotton production, and a field in which cotton, corn, and sorghum were grown in rotation. Samples of sclerotia were retrieved monthly over a 12 month period. Populations of bacteria and actinomycetes were enumerated using dilution-plate techniques and isolates were screened (in vitro) for their ability to produce substances inhibitory toP. omnivorum. The sclerotia supported large numbers of bacteria (including fluorescent pseudomonads) and actinomycetes. Numbers associated with sclerotia ranged from 10⁶–10⁹ cells per gram of sclerotia plus adherent soil and were 2–3 orders of magnitude greater than numbers from soil at the same depth but free of sclerotia. Bacteria and actinomycetes antagonistic toP. omnivorum were isolated from sclerotia buried at each of the three sites. Up to 26% of the isolates inhibited growth ofP. omnivorum.     

Mycotoxin-Producing Ability and Chemotype Diversity of Aspergillus Section Flavi from Soils of Peanut-Growing Regions in Iran

Invasion of crops with Aspergillus flavus may result in contamination of food and feed with carcinogenic mycotoxins such as aflatoxins (AF) and cyclopiazonic acid (CPA). In the present study, distribution and toxigenicity of Aspergillus flavus and A. parasiticus in soils of five peanut fields located in Guilan province, Northern Iran was investigated. From a total of 30 soil samples, 53 strains were isolated which all of them were finally identified as A. flavus by a combination of colony morphology, microscopic criteria and mycotoxin profiles. Chromatographic analysis of fungal cultures on yeast extract sucrose broth by tip culture method showed that 45 of the 53 A. flavus isolates (84.9 %) were able to produce either CPA or AFB₁, while eight of the isolates (15.1 %) were non-toxigenic. The amounts of CPA and AFB₁ produced by the isolates were reported in the range of 18.2–403.8 μg/g and 53.3–7446.3 μg/g fungal dry weights, respectively. Chemotype classification of A. flavus isolates based on the ability for producing mycotoxins and sclerotia showed that 43.4 % were producers of CPA, AFB₁ and sclerotia (group I), 13.2 % of CPA and AFB₁ (group II), 9.4 % of AFB₁ and sclerotia (group III), 13.2 % of AFB₁ (group IV), 5.7 % of CPA and sclerotia (group V) and 15.1 % were non-toxigenic with no sclerotia (group VI). No strain was found as producer of only CPA or sclerotia. These results indicate different populations of mycotoxigenic A. flavus strains enable to produce hazardous amounts of AFB₁ and CPA are present in peanuts field soils which can be quite important regard to their potential to contaminate peanuts as a main crop consumed in human and animal nutrition.     

Factors affecting the survival of sclerotia of Sclerotium cepivorum in the Fraser Valley of British Columbia

Sclerotia of Sclerotium cepivorum buried in muck soil in the Fraser Valley decayed with time. The rate of decay of sclerotia was influenced by local environmental conditions. A mixture of soil with sclerotia increased their survival but there was no difference in the rates of decay in three different soils. The decay was greatest during winter when Fraser Valley fields are often flooded. Sclerotial decay was also affected by pretreatment of the sclerotia. Dried sclerotia decayed significantly (P < 0.05) faster than sclerotia which had not been dried, a phenomenon which is apparently due to changes in micro-organisms on the sclerotia. Dried sclerotia which had been incubated in moist soil had fewer bacteria and more fungi than sclerotia which had been incubated in soil without being dried. The increase in fungi on the dried sclerotia was due to a dramatic increase in Trichoderma spp.     

Symbiosis of a termite and a sclerotium-forming fungus: Sclerotia mimic termite eggs

Brown balls, of a similar size but different shape to termite eggs, were found frequently in the piles of eggs of the subterranean termite Reticulitermes speratus. rDNA analysis identified the ball as the sclerotia of the fungus, Fibularhizoctonia sp. nov, which is phylogenetically closest to decay fungi, Athelia spp. Laboratory observation showed that the workers gathered the eggs and the sclerotia indiscriminately, even if they were widely scattered in a Petri dish, and piled them up in a specific place for egg care. We compared the morphology of the eggs with that of sclerotia of Fibularhizoctonia spp. and Athelia spp. in relation to egg carrying behaviour, and found that the workers could only carry the Fibularhizoctonia spp. sclerotia whose diameters were similar to the short diameter of the eggs. We also conducted a bioassay using termite eggs and dummy eggs (glass beads and sea sand) of two diameter-classes, coated with or without the egg-derived chemicals. The workers recognized the eggs based on a combination of the size, shape, and chemical cues. All the results suggested that the sclerotia mimic the eggs both morphologically and chemically. Finally, we found that the workers suppressed germination of sclerotia, and termite egg survival increased in the presence of sclerotia only if they were tended by the workers. If the workers were removed experimentally, the sclerotia germinated and grew by exploiting termite eggs. These results suggest that the sclerotia protect termite eggs from putative pathogens.     

暗褐网柄牛肝菌菌核形成相关基因分析

【背景】暗褐网柄牛肝菌(Phlebopus portentosus)是第一个能够人工栽培的食用牛肝菌,人工栽培过程中,不同菌株会形成数量不等的菌核。【目的】探明不同菌株产核差异机制。【方法】采集多菌核(JH1)、寡菌核(JH2)菌株的成熟菌核及无菌核(JH3)菌株培养相同时间的菌丝体进行转录组测序,分析差异表达基因对菌核形成的作用和功能。【结果】KEGG富集分析显示,JH2 vs. JH1互比,苯丙氨酸、酪氨酸和色氨酸的生物合成,精氨酸和脯氨酸代谢,半胱氨酸及蛋氨酸代谢显著富集;JH3 vs. JH1互比,乙醛酸和二羧酸代谢显著富集;JH3 vs. JH2互比,谷胱甘肽、乙醛酸和二羧酸代谢显著富集。菌核形成相关基因分析显示,从JH2 vs. JH1、JH3 vs. JH1和JH3 vs. JH2的差异表达基因中分别筛选到69、118和82条与信号转导、感知刺激、防御、碳水化合物活性酶等有关的基因,其中碳水化合物活性酶基因数量最多。三个比较组共有的碳水化合物活性酶基因在JH1中的表达量高于JH2、JH3,表明JH1更能充分利用底物营养以形成更多菌核。【结论】本研究从转录组水平初步分析了暗...     

Determination of orchid seed viability using fluorescein diacetate

Abstract Fluorescein diacetate (FDA) staining (0.25% FDA for 10 min) was found to be a suitable technique for the rapid determination of orchid seed viability. Penetration of the dye through the testa varies between species, thus the test is ideally performed on isolated embryos. Direct FDA application to isolated embryos of seeds taken from dry storage, but after the surface had been sterilized, elicits a poor staining reaction. Incubation of the surface sterilized seeds in distilled water for 16 h, either at 6°C or at room temperature, prior to applying the test was found to overcome this problem. In the range of species studied, FDA staining accurately indicates seed viability when compared with germination of seeds on sterile nutrient media. Storage of dry Dactylorhiza fuchsii (Druce) Soó seed at an elevated temperature of 62°C indicated that, under such conditions of accelerated ageing, the FDA test accurately describes the rate of seed viability loss.     

Non-gramineous hosts ofMyriosclerotinia borealis

On the basis of cultural, anatomical, and electrophoretic studies,Myriosclerotinia borealis (=Sclerotinia borealis) is shown to occur on cultivated non-gramineous plants includingIris ensata var.hortensis (Japanese iris),I. pseudoacorus, I. hollandica (Dutch iris), Perko PVH (a hybrid green manure crop betweenBrassica campestris andB. chinensis), Allium fistulosum, andCampanula portenshlagiana. The fungus did not kill these plants, but produced functional sclerotia, capable of carpogenic germination, on decayed leaves or necrotic lesions of overwintered leaves. The fungus seems to act as a saprophyte colonizing senescent leaves and/or as a weak parasite on plants injured by freezing during winter. In culture, the fungus produces discrete tuberoid sclerotia closely attached to the agar surface; rind differentiation is poor on the under surface of sclerotia. Medullary cells are embedded in a gelatinous matrix showing no distinct intercellular spaces. The ectal excipulum of apothecia produced under artificial conditions is composed of globose cells.Myriosclerotinia borealis is thus shown to be very close toCiborinia on the basis of these sclerotial and apothecial characters.     

Cryopreservation in liquid nitrogen of cultured navel organe (Citrus sinensis Osb.) nucellar cells and subsequent plant regeneration

Suspension cultured cells of nucellar callus of navel orange (Citrus sinensis Osb. var. brasiliensis Tanaka) were successfully cryopreserved. The nucellar cells were cryoprotected in Murashige-Tucker basal medium supplemented with 5% DMSO+1.2 M sucrose in an ice bath for 1 h, and then were frozen in this solution at a cooling rate of 0.5°C/min to –40°C prior to immersion in LN₂. After rapid thawing in a +40°C water bath, regrowth was achieved by transferring the treated cells, without washing, onto filter paper discs over nutrient media solidified with agar. The viability after thawing, as evaluated by FDA and phenosafranine double staining, was about 70% of controls. The revived cells resumed growth within 3 days and produced cotyledonary embryos that developed into plants within 2 to 6 months of culture. Plants regenerated from cryopreserved cells were morphologically uniform and had the characteristics typical of navel orange.Abbreviations BA 6-benzyladenine - DMSO dimethylsulfoxide - FDA fluorescein diacetate - LN₂ liquid nitrogen - NAA -naphthaleneacetic acid - SE standard error     

Biomass and nutrient concentrations of sporocarps produced by mycorrhizal and decomposer fungi in Abies amabilis stands

Summary Sporocarps and sclerotia were collected for a one-year period in 23- and 180-year-old Abies amabilis stands in western Washington. All sporocarps were classified and chemically analyzed for N, P, K, Ca, Mg, Na and Fe. Lactarius sp. and Cortinarius sp. contributed the largest proportion of the total annual epigeous sporocarp production in both stands. Annual epigeous production was 34 kg/ha in the young stand and 27 kg/ha in the mature stand. Hypogeous sporocarp production increased from 1 kg ha^-1 yr^-1 to 380 kg ha^-1 yr^-1 with increasing stand age. High sclerotia biomass occurred in the young (2,300 kg/ha) and mature (3,000 kg/ha) stands. Peak sclerotia and epigeous sporocarp biomass in the young stand and epigeous and hypogeous sporocarp biomass in the mature stand coincided with the fall peak of mycorrhizal root biomass.In the young stand, sporocarps produced by decomposer fungi concentrated higher levels of Ca and Mn than those produced by mycorrhizal fungi. In the mature stand, sporocarps of decomposer fungi concentrated higher levels of N, P, Mn, Ca and Fe than sporocarps of mycorrhizal fungi. Epigeous and hypogeous sporocarps concentrated higher levels of N, P, and K than sclerotia or mycelium. The highest concentration of N (4.36%), P (0.76%), K (3.22%) and Na (1,678 ppm) occurred in epigeous sporocarps. Highest Mn (740 ppm) and Ca (20,600 ppm) concentrations occurred in mycelium, while highest Mg (1,929 ppm) concentrations were in hypogeous sporocarps and highest Fe (4,153 ppm) concentrations were in sclerotia.     

Histopathological studies of sclerotia of phytopathogenic fungi parasitized by a GFP transformed Trichoderma virens antagonistic strain

The gfp gene from the jellyfish Aequorea victoria, coding for the Green Fluorescent Protein (GFP), was used as a reporter gene to transform a Trichoderma virens strain I10, characterized as having a promising biocontrol activity against a large number of phytopathogenic fungi. On the basis of molecular and biological results, a stable GFP transformant was selected for further experiments. In order to evaluate the effects of GFP transformation on mycoparasitic ability of T. virens I10, sclerotia of Sclerotium rolfsii, Sclerotinia sclerotiorum and S. minor were inoculated with the T. virens strain I10 GFP transformant or the wild type strain. Statistical analysis of percentages of decayed sclerotia showed that the transformation of the antagonistic isolate with the GFP reporter gene did not modify mycoparasitic activity against sclerotia. Sclerotium colonization was followed by fluorescent microscopy revealing intracellular growth of the antagonist in the cortex (S. rolfsii) and inter-cellular growth in the medulla (S. rolfsii, and S. sclerotiorum). The uniformly distributed mycelium of T. virens just beneath the rind of sclerotia of both S. rolfsii and S. sclerotiorum suggests that the sclerotia became infected at numerous randomly distributed locations without any preferential point of entry.