The use of parameters of chlorophyll <Emphasis Type="Italic">a</Emphasis> fluorescence induction to evaluate the state of plants under anthropogenic load

The physiological state of the leaves of the small-leaved linden (Tilia cordata), silver birch (Betula pendula), and northern white cedar (Thuja occidentalis) under urban conditions was assessed via recording the kinetics of chlorophyll under fluorescence induction. Different sensitivities of the plants to adverse growing conditions were revealed. The most sensitive parameters of the fluorescence JIP test, viz., PI _ABS , F _V/F ₀, and F _V/F _M, were identified as indicators of the physiological state of the urban phytocoenosis. Recommendations for the application of the method for monitoring studies are presented.     

Impact of Field Dodder (<Emphasis Type="Italic">Cuscuta campestris</Emphasis> Yunk.) on Chlorophyll Fluorescence and Chlorophyll Content of Alfalfa and Sugar Beet Plants

The impact that the parasitic plant field dodder (Cuscuta campestris Yunk.) has on chlorophyll fluorescence and chlorophyll content of infested alfalfa (Medicago sativa L.) and sugar beet (Beta vulgaris L.) was examined under controlled conditions. Several parameters of chlorophyll fluorescence were measured in infested and non-infested alfalfa and sugar beet plants over a period of twenty days, beginning with the day of infestation. Chlorophyll contents (total, relative and ratio of chlorophyll a to b) were determined 1, 7, 14 and 20 days after infestation (DAI). Field dodder was found to affect both the total and relative chlorophyll contents in infested alfalfa and sugar beet, causing significant reduction in chlorophyll content in both host plants. This parasitic plant also affects a number of parameters of chlorophyll fluorescence (F_o, F_v/F_m, Φ_PSII, F_v and IF), showing that these parameters may be considered sensitive indicators of the impact that field dodder has on its host plants.     

Examination of chlorophyll fluorescence in sulfur-deprived cells of <Emphasis Type="Italic">Chlamydomonas reinhardtii</Emphasis>

Pulse amplitude modulation fluorimetry was used to assess chlorophyll fluorescence parameters in Chlamydomonas reinhardtii cells during sulfur deprivation. A significant (fourfold) increase in the chlorophyll fluorescence yield (parameters F ₀ and F _m) normalized to the chlorophyll concentration was shown for deprived cells. The chlorophyll content did not change during the deprivation experiments. An analysis of nonphotochemical quenching of chlorophyll fluorescence indicated a considerable modification of the energy deactivation pathways in photosystem II (PSII) of sulfur-deprived cells. For example, starved cells exhibited a less pronounced pH-dependent quenching of excited states and a higher thermal dissipation of excess light energy in the reaction centers of PSII. It was also shown that the photosynthetic apparatus of starved cells is primarily in state 2 and that back transition to state 1 is suppressed. However, these changes cannot cause the discovered elevation of chlorophyll fluorescence intensity (F ₀ and F _m) in the cells under sulfur limitation. The observed increase in the chlorophyll fluorescence intensity under sulfur deprivation may be due to partial dissociation of peripheral light-harvesting complexes from the reaction centers of PSII or a malfunction of the dissipative cycle in PSII, involving cytochrome b ₅₅₉.     

Quantify the response of purslane plant growth,photosynthesis pigments and photosystem II photochemistry to cadmium concentration gradients in the soil

The cadmium (Cd), being a widespread soils pollutant and one of the most toxic heavy metals in the environment, adversely affects sustainable crop production and food safety. Pot experiment was conducted to quantify and simulate the response of purslane (Portulaca oleracea L.) plants to Cd toxicity. The purslane germinated seeds were cultivated in twelve Cd concentrations (from 0 to 300 mg/kg of Cd in soil) for six weeks and then some growth characteristics, photosynthesis pigments, and chlorophyll a fluorescence parameters were measured. The influence of Cd gradients in the soil on all growth parameters, photosynthesis pigments and chlorophyll a fluorescence parameters (except F_m and carotenoid content) were described by a segmented model. Furthermore, F_m and carotenoid contents were fitted to a linear model. The growth characteristics, chlorophyll content, photosynthetic pigments and some parameters of chlorophyll a fluorescence such as F_v, F_v/F_m, Y(II) and ETR decreased when Cd concentration increased. In contrast, F₀, Y(NPQ) and Y(NO) increased and F_m was not significantly affected. In general, most variations in the studied parameters were recorded with low concentrations of cadmium, which ranged from 0 to 125 mg/kg. Also, the growth characteristics (especially stem, leaf, and shoot dry weights) were more sensitive to Cd contamination than other parameters. Moreover, among chlorophyll fluorescence parameters, Y(NPQ) was the most sensitive to Cd concentration gradients in the soil that can be due to disturbances of antennae complex of PSII.     

Dehydration-induced changes in spectral reflectance indices and chlorophyll fluorescence of Antarctic lichens with different thallus color,and intrathalline photobiont

In this study, we investigated responses of the Photochemical Reflectance Index (PRI), and Normalized Difference Vegetation Index (NDVI) to gradual dehydration of several Antarctic lichen species (chlorolichens: Xanthoria elegans, Rhizoplaca melanophthalma, Physconia muscigena, cyanolichen: Leptogium puberulum), and a Nostoc commune colony from fully wet to a dry state. The gradual loss of physiological activity during dehydration was evaluated by chlorophyll fluorescence parameters. The experimental lichen species differed in thallus color, and intrathalline photobiont. In the species that did not exhibit color change with desiccation (X. elegans), NDVI and PRI were more or less constant (mean of 0.25, ??0.36, respectively) throughout a wide range of thallus hydration status showing a linear relation to relative water content (RWC). In contrast, the species with apparent species-specific color change during dehydration exhibited a curvilinear relation of NDVI and PRI to RWC. PRI decreased (R. melanophthalma, L. puberulum), increased (N. commune) or showed a polyphasic response (P. muscigena) with desiccation. Except for X. elegans, a curvilinear relation was found between the NDVI response to RWC in all species indicating the potential of combined ground research and remote sensing spectral data analyses in polar regions dominated by lichen flora. The chlorophyll fluorescence data recorded during dehydration (RWC decreased from 100 to 0%) revealed a polyphasic species-specific response of variable fluorescence measured at steady state—F_s, effective quantum yield of photosystem II (Φ_PSII), and non-photochemical quenching (qN). Full hydration caused an inhibition of Φ_PSII in N. commune while other species remained unaffected. The dehydration-dependent fall in Φ_PSII was species-specific, starting at an RWC range of 22–32%. Critical RWC for Φ_PSII was around 5–10%. Desiccation led to a species-specific polyphasic decrease in F_s and an increase in qN indicating the involvement of protective mechanisms in the chloroplastic apparatus of lichen photobionts and N. commune cells. In this study, the spectral reflectance and chlorophyll fluorescence data are discussed in relation to the potential of ecophysiological processes in Antarctic lichens, their resistance to desiccation and survival in Antarctic vegetation oases.     

Effects of biochar on photosystem function and activities of protective enzymes in <Emphasis Type="Italic">Pyrus ussuriensis</Emphasis> Maxim. under drought stress

The mechanisms how orchard mulching biochar influenced the photosynthetic apparatus and the role of protective enzyme activities were employed to evaluate the value of biochar application for the cultivation of fruit trees in arid areas. Potted 2-year-old seedlings of Pyrus ussuriensis Maxim. were studied to determine the effects of orchard mulching with biochar on photosystem function, Rubisco activity, net photosynthetic rate (P _n), and protective enzyme activities under drought stress. The experiment included three conditions: Drought (D), Drought + Biochar (9 t hm^?2, DB), and CK (normal management). The results showed that biochar could significantly retard the loss of soil efficient moisture and effectively change the chlorophyll fluorescence parameters, including reducing the initial fluorescence (F _o) and J points to the relative variable fluorescence (V _j), while increasing the maximal photochemistry efficiency of photosystem (PS) II (F _v/F _m), the efficiency that a trapped electron can move further ahead of \(Q_{A}\) (ψ _o), and the photosynthetic performance index (PI_ABS), thus effectively protecting PS II from damage. Biochar application also increased P _n and Rubisco activity. Compared with CK, the activity levels of superoxide dismutase (SOD) and peroxidase (POD) during drought stress increased rapidly to a peak and then began to decrease. When H₂O₂ was accumulated, there was clearance of CAT activity which was enhanced, accompanied by increased levels of a membrane lipid peroxidation product (MDA). However, MDA levels were always lower for DB than for D. By slowing the regulation of the photosynthetic physiological functions and cytoplasmic membrane peroxidation, the plants could significantly avoid serious damage and were more adaptable to drought stress.     

Physiological and biochemical parameters: new tools to screen barley root exudate allelopathic potential (<Emphasis Type="Italic">Hordeum vulgare</Emphasis> L. subsp. <Emphasis Type="Italic">vulgare</Emphasis>)

Morphological markers/traits are often used in the detection of allelopathic stress, but optical signals including chlorophyll a fluorescence emission could be useful in developing new screening techniques. In this context, the allelopathic effect of barley (Hordeum vulgare subsp. vulgare) root exudates (three modern varieties and three landraces) were assessed on the morphological (root and shoot length, biomass accumulation), physiological (F_v/F_m and F₀), and biochemical (chlorophyll and protein contents) variables of great brome (Bromus diandrus Roth., syn. Bromus rigidus Roth. subsp. gussonii Parl.). All the measured traits were affected when great brome was grown in a soil substrate in which barley plants had previously developed for 30 days before being removed. The response of receiver plants was affected by treatment with activated charcoal, dependent on barley genotype and on the nature of the growing substrate. The inhibitory effect was lower with the addition of the activated charcoal suggesting the release of putative allelochemicals from barley roots into the soil. The barley landraces were more toxic than modern varieties and their effect was more pronounced in sandy substrate than in silty clay sand substrate. In our investigation, the chlorophyll content and F_v/F_m were the most correlated variables with barley allelopathic potential. These two parameters might be considered as effective tools to quantify susceptibility to allelochemical inhibitors in higher plants.     

Osmotic stress affects physiological responses and growth characteristics of three pistachio cultivars

Pistachio (Pistacia vera L.) has a high tolerance to drought and soil salinity. Although adult pistachio trees are well known to be drought tolerant, the studies on physiological adaptation of pistachio cultivars to drought are limited. Therefore, three pistachio cultivars, i.e., Akbari, Kaleghochi, and Ohadi were subjected to three osmotic drought stress treatments: control (?0.1 MPa), moderate (?0.75 MPa) and severe drought (?1.5 MPa) stress using PEG 6000 for a 14-day period. All drought stress treatments decreased net photosynthesis (P _n), stomatal conductance (g _s), intercellular CO₂ concentration (C _i), and transpiration rate (E), but Ohadi maintained better its photosynthetic capacity compared to Akbari and Kaleghochi. Maximum quantum yield of PSII photochemistry (F _v /F _m), effective PSII quantum yield (ΦPSII) and photochemical quenching (qP) were also reduced. The chlorophyll fluorescence parameters indicated that Akbari was more susceptible to the applied drought stress. Drought stress levels decreased chlorophyll pigments, fresh weight, stem elongation, leaf nitrogen content (N), leaf water potential and increased water use efficiency (WUE). Proline increased strongly under drought stress for Akbari. After 2 weeks of stress a recovery of 2 weeks was applied. This period was insufficient to fully restore the negative effects of the applied stress on the studied cultivars. Based on the reduction of photosynthesis and the increase of the proline content Akbari seems more sensitive to the applied drought stress.     

Intrapopulation heterogeneity of the fluorescence parameters of the marine plankton alga <Emphasis Type="Italic">Thalassiosira weissflogii</Emphasis> at various nitrogen levels

Fluorescence of the marine alga Thalassiosira weissflogii (Grunow) Fryxell et Hasle with open (F _o ) and closed (F _m ) reaction centers of photosystem 2 (PS 2) and its relative variable fluorescence (F _v/F _m ) were measured at various levels of inorganic nitrogen. A significant heterogeneity of the population in terms of these parameters was revealed. Some cells within the population were more sensitive to nitrogen deficiency, and their photosynthetic apparatus was disrupted to a greater extent. The cells within a population also differed in terms of their ability to recover after incubation at low nitrogen levels. Enhancement of nitrogen deficiency resulted in an increase in the variability of the F _o and F _v/F _m values of the cells. Fluorescence variability decreased at a less pronounced deficiency. Fluorescence variability should be taken into consideration in the studies concerning responses of algae to changes in nutrient contents.     

Frequently asked questions about chlorophyll fluorescence,the sequel

Using chlorophyll (Chl) a fluorescence many aspects of the photosynthetic apparatus can be studied, both in vitro and, noninvasively, in vivo. Complementary techniques can help to interpret changes in the Chl a fluorescence kinetics. Kalaji et al. (Photosynth Res 122:121–158, 2014a) addressed several questions about instruments, methods and applications based on Chl a fluorescence. Here, additional Chl a fluorescence-related topics are discussed again in a question and answer format. Examples are the effect of connectivity on photochemical quenching, the correction of F _V /F _M values for PSI fluorescence, the energy partitioning concept, the interpretation of the complementary area, probing the donor side of PSII, the assignment of bands of 77 K fluorescence emission spectra to fluorescence emitters, the relationship between prompt and delayed fluorescence, potential problems when sampling tree canopies, the use of fluorescence parameters in QTL studies, the use of Chl a fluorescence in biosensor applications and the application of neural network approaches for the analysis of fluorescence measurements. The answers draw on knowledge from different Chl a fluorescence analysis domains, yielding in several cases new insights.     

Photosynthetic characteristics and effects of exogenous glycine of Chorispora bungeana under drought stress

We investigated the photosynthetic characteristics of Chorispora bungeana under conditions of drought stress caused by different concentrations of polyethylene glycol-6000 (PEG; 0, 5, 20, and 40%) and various concentrations of exogenous glycine (0, 5, 10, and 20 mM) with 20% PEG. We showed that moderate and severe drought stress of PEG reduced the chlorophyll (Chl) content (both Chl a and b), maximal quantum yield of PSII photochemistry (F_v/F_m), actual photochemical efficiency of PSII in light (Y_II), and quantum yield of regulated energy dissipation (Y_NPQ), while Chl a/b and quantum yield of nonregulated energy dissipation (Y_NO) increased. The low and moderate drought stress increased Mg²⁺ and Fe³⁺ contents, while a decrease in Mg²⁺ and Fe³⁺ was found under severe drought stress. Compared to sole PEG stress, the addition of exogenous 10 mM glycine increased Chl, Mg²⁺ and Fe³⁺ contents, F_v/F_m, Y_II, and Y_NPQ, and reduced Y_NO. On the contrary, 20 mM glycine showed an opposite effect, except for Y_NO. Our results proved that Chl contents and fluorescence parameters are reliable indicators for drought tolerance of C. bungeana. We suggest that a proper glycine content can relieve the effect of drought stress on C. bungeana.     

Nitrogen-induced variations in leaf gas exchange of spring triticale under field conditions

Nitrogen (N) is the key factor limiting photosynthetic processes and crop yield. Little is known about the response of leaf gas exchange of spring triticale (Triticosecale Wittm.) to N supply. The effect of N fertilizers on different gas exchange variables, i.e., photosynthetic rate (A), transpiration rate (E), stomatal conductance (g _s), instantaneous water use efficiency (WUE) and maximum quantum yield of photosystem II (PSII) (F _v/F _m), chlorophyll index (SPAD, soil–plant analysis development), and the relationship of these variables with yield were studied in spring triticale grown under field conditions. Six treatments of N—0, 90, 180, 90 + 30, 90 + 30 + 30 kg ha^?1 (applied as ammonium nitrate, AN) and one treatment of N 90 + 30 + 30 kg ha^?1 (applied as urea ammonium nitrate solution, UAN) were compared. The analysis of variance showed that throughout the triticale growing season, N fertilization had significant effects on A, WUE, g _s and SPAD. On average, N fertilizer application increased A values by 14–70%. E and F _v/F _m values were not influenced by N fertilization levels. The effect of growth stage and year on gas exchange variables and F _v/F _m and SPAD was found to be significant. At different growth stages, A values varied and maximum ones were reached at BBCH 31–33 (decimal code system of growth stages) and BBCH 59. With aging, values of A decreased independently of N fertilization level. The gas exchange variables were equally affected by both fertilizer forms. The interplay among grain yield, leaf gas exchange variables, F _v/F _m and SPAD of spring triticale was estimated. The statistical analysis showed that grain yield positively and significantly correlated with A and SPAD values throughout the growing season.     

The effects of lead on photosynthetic performance of waxberry seedlings (<Emphasis Type="Italic">Myrica rubra</Emphasis>)

The photosynthesis was investigated 30 d after Pb treatment in Myrica rubra seedlings. The Pb treatment resulted in significantly increased Pb concentrations in shoots. Low Pb concentration exposure (≤2 mM) reduced the net photosynthetic rate (P_N), transpiration rate (E), and stomatal conductance (gs) without affecting the intercellular CO₂ concentration (C_i), chlorophyll (Chl) content, and Chl fluorescence parameters. At 10 d after severe Pb treatment (≥4 mM), P_N was inhibited and accompanied by Chl damage, while at 30 d, the inhibition of P_N was followed by an increase of C_i and a decrease of gs, E, Chl content, and Chl fluorescence parameters. M. rubra showed a promising prospect for use in the soil phytoremediation, when Pb concentration is low, but the remediation efficiency of M. rubra is limited if Pb exceeds 2 mM.     

Closure of Stomata in Water-Stressed Pine Needles Results from the Decreased Water Potential of the Mesophyll Apoplast in the Substomatal Cavity

Pine (Pinus sylvestris L.) seedlings grown under controlled conditions were subjected to water deficit (external water potentials ranging from–0.15 to–1.5 MPa) by adding polyethylene glycol 6000 (PEG) to the nutrient solution. Following this treatment, the dry weights of plant shoots and roots, as well as the ratio of variable to maximum chlorophyll fluorescence (F_v/F_m), nonphotochemical quenching (NPQ) of chlorophyll excitations, photosynthetic CO₂/H₂O exchange, dark respiration of needles, and water potential of mesophyll apoplast in the substomatal cavity of pine needles, were measured. The imposed water deficit was followed by the inhibition of seedling growth, suppression of photosynthesis and transpiration, and by the decreased content of photosynthetic pigments. It is shown for the first time that the closure of stomata in the needles of water-stressed pine seedlings falls into the physiological reaction norm and is caused by the reduction of water potential in the mesophyll apoplast of the substomatal cavity.     

Assessment of anthropogenic pressures on South European Atlantic bogs (NW Spain) based on hydrochemical data

Cyanobacterial exudates are known to allelopathically inhibit submerged macrophytes, but the influence of the cyanobacteria growth phase on this effect is yet unknown. We compared the effect of exudates of the exponential growth phase of Microcystis aeruginosa Kütz. Elenk with exudates during the decline phase on seedlings of the macrophyte species Potamogeton crispus L. Biomass, chlorophyll content, the ratio of variable–maximum fluorescence (F _v/F _m), and light response capacity of P. crispus seedings were significantly inhibited when affected by M. aeruginosa exudates of the exponential growth phase but promoted by exudates of the decline phase. Tiller numbers of P. crispus increased by 350% under the influence of exponential phase exudates, but decreased by 60% when decline phase exudates were applied. Both exudates increased the malondialdehyde contents and decreased the activity of superoxide dismutase and peroxidase in P. crispus seedlings. We conclude that the exponential growth phase of cyanobacteria rather than the decline phase is important for disrupting photosynthesis and for inducing oxidative stress in submerged macrophytes. Planting P. crispus should thus not be applied in summer but during the cyanobacteria decline phase.     

Subsurface chlorophyll maximum (SCM) location and extension in the water column as governed by a density interface in the strongly stratified Kattegat estuary

The aims of the study were to analyse the relations between the physics of a water column and the location of the subsurface chlorophyll maximum (SCM) peaks in a strongly stratified estuary. Could extension and depth location of the SCM be explained by the physical conditions in terms of water column stratification and density interface? Questions were addressed by obtaining data on water column density (CTD), chlorophyll a (Chl a), nutrients, (F _v/F _m), σ_PSII and K _d(PAR) at 15 positions along a 575 km transect in the Kattegat estuary. Results showed that the estuary was strongly stratified with mixed surface and bottom layers intercepted by a layer where density increased with depth. The SCM occurred only in this density interface, and widths of SCM and density interface were highly correlated. The surface waters were nearly depleted of inorganic nitrogen, phosphate and silicate though with significant higher concentrations in the waters below the interface. The Chl a concentration was comparatively higher in the SCM peak as well as maximum quantum efficiency (F _v/F _m) and functional cross sectional area (σ_PSII). The SCM was maintained at very low light levels and by a diapycnal nitrogen flux, with a stratified water column and nutrient depleted surface waters as predecessors. It was concluded that the depth location and vertical extension of the SCM in the estuary were closely linked to the physical structure of the water column in terms of density interface and stratification.     

Comparative analyses of physiological assays and chlorophyll <Emphasis Type="Italic">a</Emphasis> variable fluorescence parameters: investigating the importance of phosphorus availability in oligotrophic and eutrophic freshwater systems

Diverse measurements of nutrient status indicators were used to test the severity of physiological phosphorus (P) limitation of phytoplankton among lake systems ranging from oligotrophic to eutrophic, based on P and chlorophyll a (Chl a) concentrations. Metabolic assays and particulate nutrient ratios were used to estimate nutrient status at sites located in Lake Erie, Lake Ontario and Lake Huron. Variable fluorescence ratios (F _v/F _m), relative electron transport rates and their response to irradiance were measured by the pulse-amplitude-modulated fluorometer. Under summer stratified conditions, P deficiency was strongest in the oligotrophic sites and nitrogen (N) status indicators and Chl a variable parameters revealed no severe N deficiency. Nutrient amendment assays showed positive associations with P additions and Chl a fluorescence parameters at P-deficient sites. In the most oligotrophic sites, N additions revealed a modest increase only detected by the Chl a fluorescence parameters. Phytoplankton communities were also associated with nutrient status, where chrysophytes and cryptophytes were important in P-deficient sites and cyanobacteria, phyrrophyta, and diatoms were prevalent in nutrient-rich sites. The results confirmed that Chl a fluorescence parameters can reveal P deficiency and indicate its severity among the range of trophic status in aquatic systems.     

Sap flow of the southern conifer, <Emphasis Type="Italic">Agathis australis</Emphasis> during wet and dry summers

Key message

Analysis of sap flux density during drought suggests that the large sapwood and rooting volumes of larger trees provide a buffer against drying soil.

Abstract

The southern conifer Agathis australis is amongst the largest and longest-lived trees in the world. We measured sap flux densities (F _d) in kauri trees with a DBH range of 20–176 cm to explore differences in responses of trees of different sizes to seasonal conditions and summer drought. F _d was consistently higher in larger trees than smaller trees. Peak F _d was 20 and 8 g m^?2 s^?1 for trees of diameters of 176 and 20 cm, respectively, during the wet summer. Multiple regression analysis revealed photosynthetically active radiation (PAR) and vapour pressure deficit (D) were the main drivers of F _d. During drought, larger trees were more responsive to D whilst smaller trees were more responsive to soil drying. Our largest tree had a sapwood area of 3,600 cm². Preliminary analysis suggests stem water storage provides a buffer against drying soil in larger trees. Furthermore, F _d of smaller trees had higher R ² values for soil moisture at 30 and 60 cm depth than soil moisture at 10 cm depth (R ² = 0.68–0.97 and 0.55–0.67, respectively) suggesting that deeper soil moisture is more important for these trees. Larger trees did not show a relationship between F _d and soil moisture, suggesting they were accessing soil water deeper than 60 cm. These results suggest that larger trees may be better prepared for increasing frequency and intensity of summer droughts due to deeper roots and/or larger stem water storage capacity.

     

Effect of vermicompost fertilizer on photosynthetic characteristics of chickpea (Cicer arietinum L.) under drought stress

Water availability is an important factor for plant growth in arid environments. In recent decades, vermicompost (VC) fertilizer has been used in agriculture as a safe and effective fertilizer with high water-holding capacity. The aim of the present study was to characterize effects of VC fertilizer on photosynthetic activity of chickpea (Cicer arietinum L. cv. Karaj) under drought conditions at three different growth stages. Tests were carried out with four volumetric ratios of VC to soil, i.e., 0:100, 10:90, 20:80, and 30:70, and three levels of drought stress, i.e., no stress (NS), moderate drought (MS), and severe drought (SS) (100, 75, and 25% of field capacity, respectively). Evaluations were performed at the seedling, flowering, and podding stage. We found that the VC treatment under NS conditions significantly increased total chlorophyll content [Chl (a+b)], intercellular CO₂ concentration (C_i), net photosynthetic rate (P_N), transpiration rate (E), and maximal quantum yield of PSII photochemistry (F_v/F_m) at all three stages. The VC addition of 10 and 20% significantly enhanced the Chl content and F_v/F_m under MS and F_v/F_m, C_i, and P_N under SS at the flowering stage. In conclusion, our results proved a positive effect of the VC fertilizer on photosynthesis of chickpea under NS conditions, but it was not found under MS and SS.     

Nucleotide polymorphisms of candidate genes of adaptive significance in the ural populations of <Emphasis Type="Italic">Larix sibirica</Emphasis> Ledeb.

The objectives of conservation and sustainable forest management require in depth study of genomes of woody plants and definition of their intraspecific genetic diversity. In recent years, an approach was developed based on the study of “candidate genes” that can potentially be involved in the formation of adaptive traits. In this study, we investigated nucleotide polymorphism of several adaptive candidate genes in the populations of Siberian larch (Larix sibirica Ledeb.) in the Urals. Representatives of this genus are among the most valuable and widely distributed forest tree species in Russia. From ten selected gene loci in the genome of L. sibirica, we isolated and investigated three loci, one of which (ABA-WDS) was sequenced in L. sibirica for the first time. The total length of the analyzed sequence in each individual amounted to 2865 bp. The length of locus alignment was from 360 bp to 1395 bp. In total, we identified 200 polymorphic positions. The most conservative is locus 4CL1-363, and the most polymorphic is locus sSPcDFD040B03103-274. The studied populations of L. sibirica are characterized by a high level of nucleotide polymorphism in comparison with other species and genuses (Picea, Pinus, Pseudotsuga, Abies) conifers plants (Hd = 0.896; π = 0.007; θ_W = 0.015). The most selectively neutral polymorphism (D _T =–0.997) was attributed to locus 4CL1-363, and polymorphism with high probability of adaptability (D _T =–1.807) was determined for the ABA-WDS locus. We identified 54 SNP markers, only five of which were nonsynonymous (9.26%) replacements. The average frequency of SNPs in the three studied loci of L. sibirica was one SNP in 53 bp. We detected unique SNP markers for eight populations, which could potentially be used to identify populations. Populations that are characterized by the highest number of unique SNP markers can be recommended for selection in order to preserve the gene pool of the species.