Species richness and food web structure of soil decomposer community as affected by the size of habitat fragment and habitat corridors

While most ecologists agree that the effects of fragmentation on diversity of organisms are predominantly negative and that the scale of fragmentation defines their severity, the role of habitat corridors in mitigating those effects still remains controversial. This ambiguousness rests largely on various difficulties in experimentation, a problem partially solved in the present paper by the use of easily manipulated soil communities. In this 2.5‐year‐long field experiment, we investigated the responses of soil decomposer organisms (from microbes to mesofaunal predators) to habitat fragment size, in the presence or absence of habitat corridors connecting the fragments. The habitat fragments and corridors, composed of forest humus soil, were embedded in mineral soil representing an uninhabitable (or nonpreferred) matrix for the decomposer organisms. The results demonstrate that soil decomposer organisms do respond to changes in their habitat size: the species richness of microarthropods (mites and collembolans) increased as the size of the fragments increased. Especially collembolan species and predatory mites proved to be sensitive to the restricted habitat size, which is suggested to be a consequence of the large proportion of rare species and small and fluctuating population sizes in these groups. Contrary to our expectations, the presence of corridors had no positive effects on species richness or abundance of any of the studied faunas, possibly because of the low quality of the corridors. On the other hand, the biomass of soil fungi increased in the presence of corridors, which apparently provided a preferred pathway for vegetative dispersal of the fungi. Our results indicate that despite their characteristic underground environment, the response of soil decomposer organisms – in particular that of microarthropods – to habitat size is not unlike to that of the larger organisms in aboveground habitats.     

Exogenous carbon turnover within the soil food web strengthens soil carbon sequestration through microbial necromass accumulation

Exogenous carbon turnover within soil food web is important in determining the trade-offs between soil organic carbon (SOC) storage and carbon emission. However, it remains largely unknown how soil food web influences carbon sequestration through mediating the dual roles of microbes as decomposers and contributors, hindering our ability to develop policies for soil carbon management. Here, we conducted a ¹³C-labeled straw experiment to demonstrate how soil food web regulated the residing microbes to influence the soil carbon transformation and stabilization process after 11 years of no-tillage. Our work demonstrated that soil fauna, as a “temporary storage container,” indirectly influenced the SOC transformation processes and mediated the SOC sequestration through feeding on soil microbes. Soil biota communities acted as both drivers of and contributors to SOC cycling, with 32.0% of exogenous carbon being stabilizing in the form of microbial necromass as “new” carbon. Additionally, the proportion of mineral-associated organic carbon and particulate organic carbon showed that the “renewal effect” driven by the soil food web promoted the SOC to be more stable. Our study clearly illustrated that soil food web regulated the turnover of exogenous carbon inputs by and mediated soil carbon sequestration through microbial necromass accumulation.     

Global change belowground: impacts of elevated CO2, nitrogen,and summer drought on soil food webs and biodiversity

The world's ecosystems are subjected to various anthropogenic global change agents, such as enrichment of atmospheric CO₂ concentrations, nitrogen (N) deposition, and changes in precipitation regimes. Despite the increasing appreciation that the consequences of impending global change can be better understood if varying agents are studied in concert, there is a paucity of multi‐factor long‐term studies, particularly on belowground processes. Herein, we address this gap by examining the responses of soil food webs and biodiversity to enrichment of CO₂, elevated N, and summer drought in a long‐term grassland study at Cedar Creek, Minnesota, USA (BioCON experiment). We use structural equation modeling (SEM), various abiotic and biotic explanatory variables, and data on soil microorganisms, protozoa, nematodes, and soil microarthropods to identify the impacts of multiple global change effects on drivers belowground. We found that long‐term (13‐year) changes in CO₂ and N availability resulted in modest alterations of soil biotic food webs and biodiversity via several mechanisms, encompassing soil water availability, plant productivity, and – most importantly – changes in rhizodeposition. Four years of manipulation of summer drought exerted surprisingly minor effects, only detrimentally affecting belowground herbivores and ciliate protists at elevated N. Elevated CO₂ increased microbial biomass and the density of ciliates, microarthropod detritivores, and gamasid mites, most likely by fueling soil food webs with labile C. Moreover, beneficial bottom‐up effects of elevated CO₂ compensated for detrimental elevated N effects on soil microarthropod taxa richness. In contrast, nematode taxa richness was lowest at elevated CO₂ and elevated N. Thus, enrichment of atmospheric CO₂ concentrations and N deposition may result in taxonomically and functionally altered, potentially simplified, soil communities. Detrimental effects of N deposition on soil biodiversity underscore recent reports on plant community simplification. This is of particular concern, as soils house a considerable fraction of global biodiversity and ecosystem functions.     

农田土壤食物网管理的原理与方法

土壤食物网在维持生态系统生产力和健康等方面起着重要作用,但现代农业中,化肥农药等外部投入已经改变或部分替代了土壤食物网的功能,由此也造成一系列的环境问题。为了协调作物高产与环境保护的利益,需要对土壤食物网进行管理,使土壤食物网符合作物生长的需要,即建立健康土壤食物网。管理土壤食物网有两种方式:(1)直接方式,即通过调节食物网各个功能群的组成来管理土壤食物网;(2)间接方式,即根据农田土壤食物网以自下而上调控方式为主、强调低营养阶层的资源限制的原理,通过调节碎屑的数量和质量来管理食物网。在这两种调控方式中,都需要对被管理的食物网进行监测,监测的方式也分两种,一种是直接测定食物网各功能群的数量和生物量,另外一种方式即以线虫为工具来反应土壤食物网的结构。     

锡林郭勒草原自然保护区土壤动物初步调查

土壤动物的生存、活动与栖息地环境密切相关。一方面栖息地生态因子决定着土壤动物的生存与活动;另一方面,土壤动物对土壤有机质的改变、土壤微生物的生存、植物的生长等诸生态因子的变化起着一定的促进作用。因此随着草原生态系统研究的日趋深入,土壤动     

Community composition of ammonia-oxidizing bacteria and archaea in rice field soil as affected by nitrogen fertilization

Little information is available on the ecology of ammonia-oxidizing bacteria (AOB) and archaea (AOA) in flooded rice soils. Consequently, a microcosm experiment was conducted to determine the effect of nitrogen fertilizer on the composition of AOB and AOA communities in rice soil by using molecular analyses of ammonia monooxygenase gene (amoA) fragments. Experimental treatments included three levels of N (urea) fertilizer, i.e. 50, 100 and 150 mg N kg⁻¹ soil. Soil samples were operationally divided into four fractions: surface soil, bulk soil deep layer, rhizosphere and washed root material. NH₄⁺-N was the dominant form of N in soil porewater and increased with N fertilization. Cloning and sequencing of amoA gene fragments showed that the AOB community in the rice soil consisted of three major groups, i.e. Nitrosomonas communis cluster, Nitrosospira cluster 3a and cluster 3b. The sequences related to Nitrosomonas were predominant. There was a clear effect of N fertilizer and soil depth on AOB community composition based on terminal restriction fragment length polymorphism fingerprinting. Nitrosomonas appeared to be more abundant in the potentially oxic or micro-oxic fractions, including surface soil, rhizosphere and washed root material, than the deep layer of anoxic bulk soil. Furthermore, Nitrosomonas increased relatively in the partially oxic fractions and that of Nitrosospira decreased with the increasing application of N fertilizer. However, AOA community composition remained unchanged according to the denaturing gradient gel electrophoresis analyses.     

Soil food web components affect plant community structure during early succession

There is a growing awareness among ecologists of the strong links that exist between above- and belowground food webs. So far, the majority of studies have considered these links from the microbial point of view, usually with single plants or very simple plant communities. Here, we report the interactions between two components of the soil food web, root-feeding insects and arbuscular mycorrhizal (AM) fungi, and their effects on the structure and development of early successional plant communities. We use long-term field experiments that employ manipulations of these organisms, both singly and in combination. Both groups have strong effects on plant community structure, with root-feeding insects increasing and AM fungi decreasing plant species richness. Root-feeding insects appear to accelerate the process of early succession, while AM fungi retard it. There are strong interactions between the insects and fungi. The effect of insects is greatest when AM fungi are present. It is suggested that this is a consequence of plant physiology, rather than any direct interaction between the groups involved. Meanwhile, AM fungi have their greatest effect on plant communities when insects are absent, suggesting that there is some disruption of the symbiosis by the invertebrates. In developing plant communities, the rate and direction of the succession is therefore determined by the relative abundance of these two members of the soil food web. The next challenge will be to understand the roles of other members of the subterranean web in terms of their interactions with insects and AM fungi and effects on plant community development.     

上海虹桥机场土壤及草丛动物群落特征和鸟类关系研究

20 0 0年 4月至 2 0 0 1年 3月 ,对上海虹桥机场草地土壤动物和草丛动物群落的组成、数量和季节性变化特征进行了初步的研究。土壤动物有节肢动物门、软体动物门、环节动物门等 12个目或类。其中蜱螨目和弹尾目为常年土壤动物群落的优势类群 ,各占年总捕量的 19.75 %和 2 3.14 % ;蚯蚓、多足纲、等足目、膜翅目、鞘翅目为常见类群 ,5类全年占总捕量的 4 8.96 %。草丛动物有 15目或类。其中鞘翅目、直翅目、半翅目、同翅目、膜翅目、双翅目以及蜘蛛目为草丛动物群落的优势类群 ,占全年总捕量的89.6 3%。草丛动物类群数和个体数总体表现为 :7月 >9月 >5月 >4月 >12月 >3月。土壤动物和草丛动物的分布与生境密切相关。所捕的 2 2类草地动物中 ,可直接被鸟类捕食的有近 2 0类 ,主要为生活于草地常见类群中 ,因此 ,草地的生境以及草地动物的分布是吸引鸟类到机场栖息和摄食的主要原因。降低草高、减少结实的植物、控制土壤动物的密度是减少机场区鸟类数量的有效方法和途径。     

土壤动物食物网研究方法

长期以来关于陆地生态系统的研究都集中在地上部分,而对于地下部分知之甚少。地下生态系统营养关系是生态系统中各生物成员之间最重要的联系,是物质循环、能量流动的重要载体。研究土壤动物食物网已成为现代地下/土壤生态学研究的热点与前沿。由于土壤动物的个体小、食性复杂、栖息环境隐蔽等原因,使得对土壤动物食物网的研究困难重重,所以选择合适的研究方法尤为重要。本文总结了国际上近几十年来土壤动物食物网研究方法,将其分为传统方法(野外直接观察法、室内培养实验观察法、显微镜下肠容物分析法)、常用方法(消化酶分析法、脂肪酸分析法、稳定同位素技术、特定化合物分子的稳定同位素分析技术)和现代分子方法(DNA分子跟踪食物链网络技术、单克隆抗体技术)3大类,具体介绍了每一种方法的发展历史和应用现状。根据土壤动物自身特性及对各方法的优势与劣势的比较,脂肪酸分析法和稳定同位素分析法是当前土壤动物食物网研究的常用方法;随着未来物种分子鉴定技术的改进和数据库的积累,DNA分子跟踪食物链网络技术将会成为未来的主流发展方向。     

玉米-大豆间作和施氮对红壤地中小型土壤动物群落特征的影响

通过2年田间定位试验(2013—2014),利用干漏斗法收集土壤中小型动物,探讨不同种植模式(玉米单作、玉米大豆间作、大豆单作)和施氮(0、150 kg·hm^-2)对红壤土壤动物数量和群落结构的影响.结果表明: 两年取样共捕获土壤中小型动物8349只,分属3门10纲29目,优势类群为蜱螨目和弹尾目.2013年间作和施氮均提高了玉米拔节期土壤动物的平均密度.2014年土壤动物类群数较2013年有明显的增加,施氮条件下的土壤动物平均密度较不施氮有所增加.两年多因素方差分析结果表明,种植模式和生育期对土壤动物平均密度、类群数和多样性指数都无显著影响.但在2014年,施氮显著影响了土壤动物类群数、Simpson指数和密度-类群指数;种植模式与玉米生育期的交互作用显著影响了土壤动物平均密度和类群数,同时对密度-类群和丰富度指数也有显著影响;施氮和生育期的交互作用显著影响了Simpson指数、密度-类群指数和Shannon指数.从两年的土壤动物群落去趋势分析结果来看,红壤地土壤动物群落在种植模式和施氮水平之间均没有明显的差异,群落组成的变化与玉米生育期相关.合理施氮条件下的玉米-大豆间作模式有利于提高红壤地土壤中小型动物平均密度和类群数,保持较好的多样性.     

Divergence of feeding channels within the soil food web determined by ecosystem type

Understanding trophic linkages within the soil food web (SFW) is hampered by its opacity, diversity, and limited niche adaptation. We need to expand our insight between the feeding guilds of fauna and not just count biodiversity. The soil fauna drive nutrient cycling and play a pivotal, but little understood role within both the carbon (C) and nitrogen (N) cycles that may be ecosystem dependent. Here, we define the structure of the SFW in two habitats (grassland and woodland) on the same soil type and test the hypothesis that land management would alter the SFW in these habitats. To do this, we census the community structure and use stable isotope analysis to establish the pathway of C and N through each trophic level within the ecosystems. Stable isotope ratios of C and N from all invertebrates were used as a proxy for trophic niche, and community‐wide metrics were obtained. Our empirically derived C/N ratios differed from those previously reported, diverging from model predictions of global C and N cycling, which was unexpected. An assessment of the relative response of the different functional groups to the change from agricultural grassland to woodland was performed. This showed that abundance of herbivores, microbivores, and micropredators were stimulated, while omnivores and macropredators were inhibited in the grassland. Differences between stable isotope ratios and community‐wide metrics, highlighted habitats with similar taxa had different SFWs, using different basal resources, either driven by root or litter derived resources. Overall, we conclude that plant type can act as a top‐down driver of community functioning and that differing land management can impact on the whole SFW.     

Influence of decomposer food web structure and nitrogen availability on plant growth

We studied the sensitivity of soil microbial communities and ecosystem processes to variation in the vertical and horizontal structure of decomposer food web under nitrogen poor and N-enriched conditions. Microcosms with humus and litter layer of boreal forest floor, birch seedlings infected with mycorrhizal fungi, and decomposer food webs with differing trophic group and species composition of soil fauna were constructed. During the second growing period for the birch, we irrigated half of the microcosms with urea solution, and the other half with de-ionised water to create two levels of N concentration in the substrate. During the experiment night time respirations of the microcosms were measured, and the water leached through the microcosms was analysed for concentration of mineral N, and nematode numbers. The microcosms were destructively sampled after 37 weeks for plant biomass and N uptake, structure of soil animal and microbial community (indicated by PLFA profiles), and physical and chemical properties of the humus and litter materials. Predatory mites and nematodes had a negative influence on the biomass of their microbivorous and microbi-detritivorous prey, and microbi-detritivores affected the biomass and community structure of microbes (indicated by PLFA-analysis). Moreover, predatory mites and nematodes increased microbial biomass and changed the microbial community structure. The decomposer food web structure affected also N uptake and growth of plants. Microbi-detritivorous fauna had a positive effect, whereas predators of microbial and detritus feeding fauna exerted a negative influence on plant N uptake and biomass production. The impact of a trophic group on the microbes and plant was also strongly dependent on species composition within the group. Nitrogen addition magnified the influence of food web structure on microbial biomass and plant N uptake. We suggest that addition of urea-N to the soil modified the animal-microbe interaction by increasing microbial growth and altering community structure of microbes. The presence of microbi-detritivores and predators reduced loss of carbon from the microcosms, and the food web structure influenced also water holding capacity of the materials. The changes in plant growth, nutrient cycling, size of N and C pools, and in the physical properties of the soil emphasize the importance and diversity of indirect consequences of decomposer food web structure. This revised version was published online in June 2006 with corrections to the Cover Date.     

城市化对土壤动物群落结构和多样性的影响

城市化进程加快带来的环境挑战正威胁着地球上的生物多样性。土壤动物是生物多样性的重要组成部分, 对维持土壤健康及城市生态系统稳定性具有重要意义。近年来, 城市土壤动物群落结构和多样性的研究已经取得了一定进展, 但是仍缺乏系统的总结和综述。基于此, 本文梳理归纳了国内外已有的相关文献, 总结了城市化影响土壤动物的主要途径, 并阐述了城市中不同体型大小的优势土壤动物类群对城市化的响应。本文建议未来应利用分子生物学手段深入解析城市土壤动物多样性, 明晰城市土壤食物网的结构与功能, 关注土壤动物群落的保护与恢复, 揭示城市土壤动物肠道微生物组特征, 并挖掘城市土壤动物抑制人类致病菌的潜力, 以期为城市生物多样性保护、生态系统稳定和人类健康维持提供相关科学依据。     

Irrigating grazed pasture decreases soil carbon and nitrogen stocks

The sustainability of using irrigation to produce food depends not only on the availability of sufficient water, but also on the soil's ‘response’ to irrigation. Stocks of carbon (C) and nitrogen (N) are key components of soil organic matter (SOM), which is important for sustainable agricultural production. While there is some information about the effects of irrigation on soil C stocks in cropping systems, there is a paucity of such studies in pastoral food production systems. For this study, we sampled soils from 34 paired, irrigated and unirrigated pasture sites across New Zealand (NZ) and analysed these for total C and N. On average, irrigated pastures had significantly (P < 0.05) less soil carbon (C) and nitrogen (N) than adjacent unirrigated pastures, with differences of 6.99 t C ha^?1 and 0.58 t N ha^?1 in the uppermost 0.3 m. Differences in C and N tended to occur throughout the soil profile, so the cumulative differences increased with depth, and the proportion of the soil C lost from deeper horizons was large. There were no relationships between differences in soil C and N stocks and the length of time under irrigation. This study suggests SOM will decrease when pastures under a temperate climate are irrigated. On this basis, increasing the area of temperate pasture land under irrigation would result in more CO₂ in the atmosphere and may directly and indirectly increase N leaching to groundwater. Given the large and increasing area of land being irrigated both in NZ and on a global scale, there is an urgent need to determine whether the results found in this study are also applicable in other regions and under different land management systems (e.g. arable).     

Grassland management intensification affects the soil fauna in a subtropical highland

The conversion of natural grasslands to cultivated pastures can have a significant impact on the composition and structure of soil macro- and mesofauna groups, compromising the resilience of these organisms and the ecosystem services they provide. We studied the responses of these groups to increasing levels of soil disturbance across a gradient of four land management practices: Natural grassland (NG), Improved-natural grassland (IG), Perennial-cultivated pasture (PP), and Annual-cultivated pasture (AP). The NG area had a higher abundance of macrofauna, greater dominance of certain groups, particularly Isoptera, and a lower abundance of mesofauna. On the other hand, the IG area had a higher abundance and diversity of macro- and mesofauna, with a lower dominance of specific groups. The PP area had a higher abundance of Coleoptera, Oligochaeta, and Hemiptera, whereas the AP area, despite soil disturbance, showed a higher abundance of mesofauna, particularly mites, Collembola, and Enchytraeidae, but lower diversity. Different grassland management practices have significantly altered the composition and structure of macro- and mesofauna groups, resulting in high dissimilarity between communities. We recommend IG as a more productive and sustainable alternative to the total replacement of natural vegetation (NG) with intensified converted pastures (PP and AP), as it maintains soil fauna diversity and ecosystem services.     

荒漠草原沙漠化植物群落及土壤物理变化

沙漠化是草地退化最严重的形式之一。以空间代替时间的方法,通过对宁夏中北部荒漠草原沙漠化过程中植物群落特征和土壤物理特性的研究,探讨草地植物群落与土壤物理特性对沙漠化的响应机制。结果表明:(1)潜在沙漠化阶段草地以牛枝子、猪毛蒿、中亚白草为优势种,轻度沙漠化阶段草地以中亚白草、苦豆子为优势种,中度沙漠化阶段草地以狗尾草、虫实为优势种,重度沙漠化阶段草地以沙米、赖草、狗尾草为优势种,极度沙漠化阶段草地以沙米为优势种。(2)随着沙漠化程度的加剧草地植物群落生物量、Shannon-Wiener指数、丰富度指数、盖度均呈降低趋势,但轻度沙漠化阶段草地植被生物量比潜在沙漠化增加了23%。(3)草地沙漠化导致土壤容重和土壤粗砂粒含量增加,而土壤水分,土壤细砂粒和粘粉粒含量降低。荒漠草原沙漠化导致了土壤环境和植被明显退化,草地生产力明显降低。     

Shoot and root growth and nutrients uptake of wheat as affected by soil layers

The effect of soil layering on the growth and nutrient content of wheat shoots and roots was studied. PVC containers (120 cm long and 25 cm inside diameter) were filled with layers of loam and loamy sand. Both roots and shoots dry weight increased as the thickness of loam layer increased. The root:shoot ratios decreased throughout the growing season. The N, P and K content of the shoots peaked at two weeks before anthesis, while shoot dry weight peaked at anthesis. The ranges of shoot content of N, P and K at anthesis for the different treatments were 6–25, 8–25 and 5–25% of the total plant nutrients, respectively. Late in the season the translocation rate of nutrients from the shoots to the seeds were in the following order N>P>K.     

Plant community composition steers grassland vegetation via soil legacy effects

Soil legacy effects are commonly highlighted as drivers of plant community dynamics and species co‐existence. However, experimental evidence for soil legacy effects of conditioning plant communities on responding plant communities under natural conditions is lacking. We conditioned 192 grassland plots using six different plant communities with different ratios of grasses and forbs and for different durations. Soil microbial legacies were evident for soil fungi, but not for soil bacteria, while soil abiotic parameters did not significantly change in response to conditioning. The soil legacies affected the composition of the succeeding vegetation. Plant communities with different ratios of grasses and forbs left soil legacies that negatively affected succeeding plants of the same functional type. We conclude that fungal‐mediated soil legacy effects play a significant role in vegetation assembly of natural plant communities.