Effects of the hummock–depression microhabitat on plant communities of alpine marshy meadows in the Yellow River Source Zone,China

黄河源区丘-洼微生境对高寒沼泽草甸植物群落的影响 黄河源区高寒沼泽草甸中有许多不均匀的小丘和洼地,形成了独特的微生境,深刻影响着植物特性和土壤养分含量。通过研究高寒湿地冻融丘和洼地空间异质性对植物群落和土壤性质的影响,可以深入了解微地形水文条件对丘-洼微生境空间波动的影响。本研究在黄河源区高寒沼泽湿地的冻融丘 (淹水和无淹水)和洼地(蓄水和无蓄水)共设置36个样地(1 m × 1 m),采集了45个植物样和225个土壤样, 并采用比较法评价高寒沼泽湿地是否存在“肥岛效应”。研究结果显示,冻融丘的存在增加了微生境的 空间异质性,促进了藏嵩草群落的物种多样性和土壤肥力。淹水和无淹水的冻融丘生境下的植物高度、 盖度、地上生物量、物种丰富度和多样性均显著高于湿地外围的高寒草甸。与高寒草甸相比,高寒沼泽 湿地丘-洼复合体为莎草科植物的生长提供了有利的微生境。另外,湿地丘-洼微生境与周围高寒草甸 在0–50 cm土层之间的比较表明,土壤有机碳和全氮距离地表越近含量越高。在深层次土壤中,丘洼微生 境与高寒草甸土壤养分之间的差距变小。因此,湿地丘-洼微生境形成了一个富饶的“肥沃岛”格局。这些研究结果有助于加深对高寒沼泽草甸生态系统恢复的认识。     

三江源区湿地生态系统功能分析及保育

根据多次科考调查的成果和资料,对三江源区湿地生态系统的结构和功能进行了分析。结果表明:湿地生态系统服务价值为2.10×10¹¹Yuan·a^-1,占三江源区生态系统服务功能总价值的62.07%;其中废物处理、水源涵养、气候调节的价值较大,分别为6.40×10¹⁰Yuan·a^-1、5.79×10¹⁰Yuan·a^-1、4.90×10¹⁰Yuan·a^-1,分别占湿地生态系统总价值的30.55%、27.61%、23.39%。其次为生物多样性保护、土壤形成与保护、气体调节、食物生产和原材料、娱乐文化等服务功能。此外针对三江源区湿地生态系统退化机制和存在的主要问题,提出了合理利用与保护对策。     

Characterization of the spatial distribution of plateau pika burrows along an alpine grassland degradation gradient on the Qinghai–Tibet Plateau

Plateau pika burrows are common feature of degraded grassland in the Qinghai–Tibet Plateau (QTP) and serve as an important indicator of pika activity and grassland degradation. However, the current understanding of the spatial pattern changes of pika burrows and their critical thresholds across a degradation gradient in alpine grassland is deficient. In this study, we investigated and quantified changes in the spatial pattern of plateau pika burrows under typical degraded alpine shrub meadows in the northeastern QTP using an unmanned aerial vehicle and landscape pattern metrics. The degradation of the alpine shrub meadow leads to a change in landscape pattern from a two‐layered structure of alpine shrub and alpine meadow to a mosaic of alpine meadow and bare soil, with plateau pika burrows scattered throughout. Moderate degradation is the tipping point for changes in surface landscape patterns, followed by the disappearance of alpine shrub, the retreat of alpine meadows and the encroachment of bare soil, and the increasing density and size of pika burrows. The area characteristics of alpine meadows have influenced changes in the spatial pattern of pika burrow, and maintaining its proportional area is a vital measure to control the threat of pika burrows to pastures. The results of this paper provide a methodological reference and guidance for the sustainable utilization of grassland on the QTP.     

Underwater photogrammetry for close‐range 3D imaging of dry‐sensitive objects: The case study of cephalopod beaks

• Technical advances in 3D imaging have contributed to quantifying and understanding biological variability and complexity. However, small, dry‐sensitive objects are not easy to reconstruct using common and easily available techniques such as photogrammetry, surface scanning, or micro‐CT scanning. Here, we use cephalopod beaks as an example as their size, thickness, transparency, and dry‐sensitive nature make them particularly challenging. We developed a new, underwater, photogrammetry protocol in order to add these types of biological structures to the panel of photogrammetric possibilities.
• We used a camera with a macrophotography mode in a waterproof housing fixed in a tank with clear water. The beak was painted and fixed on a colored rotating support. Three angles of view, two acquisitions, and around 300 pictures per specimen were taken in order to reconstruct a full 3D model. These models were compared with others obtained with micro‐CT scanning to verify their accuracy.
• The models can be obtained quickly and cheaply compared with micro‐CT scanning and have sufficient precision for quantitative interspecific morphological analyses. Our work shows that underwater photogrammetry is a fast, noninvasive, efficient, and accurate way to reconstruct 3D models of dry‐sensitive objects while conserving their shape. While the reconstruction of the shape is accurate, some internal parts cannot be reconstructed with photogrammetry as they are not visible. In contrast, these structures are visible using reconstructions based on micro‐CT scanning. The mean difference between both methods is very small (10⁻⁵ to 10⁻⁴ mm) and is significantly lower than differences between meshes of different individuals.
• This photogrammetry protocol is portable, easy‐to‐use, fast, and reproducible. Micro‐CT scanning, in contrast, is time‐consuming, expensive, and nonportable. This protocol can be applied to reconstruct the 3D shape of many other dry‐sensitive objects such as shells of shellfish, cartilage, plants, and other chitinous materials.

     

Plant history and soil history jointly influence the selection environment for plant species in a long‐term grassland biodiversity experiment

Long‐term biodiversity experiments have shown increasing strengths of biodiversity effects on plant productivity over time. However, little is known about rapid evolutionary processes in response to plant community diversity, which could contribute to explaining the strengthening positive relationship. To address this issue, we performed a transplant experiment with offspring of seeds collected from four grass species in a 14‐year‐old biodiversity experiment (Jena Experiment). We used two‐ and six‐species communities and removed the vegetation of the study plots to exclude plant–plant interactions. In a reciprocal design, we transplanted five “home” phytometers (same origin and actual environment), five “away‐same” phytometers (same species richness of origin and actual environment, but different plant composition), and five “away‐different” phytometers (different species richness of origin and actual environment) of the same species in the study plots. In the establishment year, plants transplanted in home soil produced more shoots than plants in away soil indicating that plant populations at low and high diversity developed differently over time depending on their associated soil community and/or conditions. In the second year, offspring of individuals selected at high diversity generally had a higher performance (biomass production and fitness) than offspring of individuals selected at low diversity, regardless of the transplant environment. This suggests that plants at low and high diversity showed rapid evolutionary responses measurable in their phenotype. Our findings provide first empirical evidence that loss of productivity at low diversity is not only caused by changes in abiotic and biotic conditions but also that plants respond to this by a change in their micro‐evolution. Thus, we conclude that eco‐evolutionary feedbacks of plants at low and high diversity are critical to fully understand why the positive influence of diversity on plant productivity is strengthening through time.     

N‐glycan processing selects ERAD‐resistant misfolded proteins for ER‐to‐lysosome‐associated degradation

Efficient degradation of by‐products of protein biogenesis maintains cellular fitness. Strikingly, the major biosynthetic compartment in eukaryotic cells, the endoplasmic reticulum (ER), lacks degradative machineries. Misfolded proteins in the ER are translocated to the cytosol for proteasomal degradation via ER‐associated degradation (ERAD). Alternatively, they are segregated in ER subdomains that are shed from the biosynthetic compartment and are delivered to endolysosomes under control of ER‐phagy receptors for ER‐to‐lysosome‐associated degradation (ERLAD). Demannosylation of N‐linked oligosaccharides targets terminally misfolded proteins for ERAD. How misfolded proteins are eventually marked for ERLAD is not known. Here, we show for ATZ and mutant Pro‐collagen that cycles of de‐/re‐glucosylation of selected N‐glycans and persistent association with Calnexin (CNX) are required and sufficient to mark ERAD‐resistant misfolded proteins for FAM134B‐driven lysosomal delivery. In summary, we show that mannose and glucose processing of N‐glycans are triggering events that target misfolded proteins in the ER to proteasomal (ERAD) and lysosomal (ERLAD) clearance, respectively, regulating protein quality control in eukaryotic cells.     

Effect of soil microorganisms and labile C availability on soil respiration in response to litter inputs in forest ecosystems: A meta‐analysis

Litter inputs can influence soil respiration directly through labile C availability and, indirectly, through the activity of soil microorganisms and modifications in soil microclimate; however, their relative contributions and the magnitude of any effect remain poorly understood. We synthesized 66 recently published papers on forest ecosystems using a meta‐analysis approach to investigate the effect of litter inputs on soil respiration and the underlying mechanisms involved. Our results showed that litter inputs had a strong positive impact on soil respiration, labile C availability, and the abundance of soil microorganisms, with less of an impact related to soil moisture and temperature. Overall, soil respiration was increased by 36% and 55%, respectively, in response to natural and doubled litter inputs. The increase in soil respiration induced by litter inputs showed a tendency for coniferous forests (50.7%)> broad‐leaved forests (41.3%)> mixed forests (31.9%). This stimulation effect also depended on stand age with 30‐ to 100‐year‐old forests (53.3%) and ≥100‐year‐old forests (50.2%) both 1.5 times larger than ≤30‐year‐old forests (34.5%). Soil microbial biomass carbon and soil dissolved organic carbon increased by 21.0%‐33.6% and 60.3%‐87.7%, respectively, in response to natural and doubled litter inputs, while soil respiration increased linearly with corresponding increases in soil microbial biomass carbon and soil dissolved organic carbon. Natural and doubled litter inputs increased the total phospholipid fatty acid (PLFA) content by 6.6% and 19.7%, respectively, but decreased the fungal/bacterial PLFA ratio by 26.9% and 18.7%, respectively. Soil respiration also increased linearly with increases in total PLFA and decreased linearly with decreases in the fungal/bacterial PLFA ratio. The contribution of litter inputs to an increase in soil respiration showed a trend of total PLFA > fungal/bacterial PLFA ratio > soil dissolved organic carbon > soil microbial biomass carbon. Therefore, in addition to forest type and stand age, labile C availability and soil microorganisms are also important factors that influence soil respiration in response to litter inputs, with soil microorganisms being more important than labile C availability.     

The pro‐inflammatory response of macrophages regulated by acid degradation products of poly(lactide‐co‐glycolide) nanoparticles

Poly(lactide‐co‐glycolide) (PLGA) shows great potentials in biomedical applications, in particular with the field of biodegradable implants and control release technologies. However, there are few systematic and detailed studies on the influence of PLGA degradation behavior on the immunogenicity. In this study, in order to develop a method for dynamically assessing the immunological response of PLGA throughout the implantation process, PLGA particles are fabricated using an o/w single‐emulsion method. The physicochemical characterizations of the prepared PLGA particles during in vitro hydrolytic degradation are investigated. Then, a series of immunological effects triggered by PLGA by‐products formed with degradation process are evaluated, including cell viability, apoptosis, polarization and inflammatory reaction. THP‐1 human cell line is set as in vitro cell model. Our results show that PLGA degradation‐induced acid environment decreases cell viability and increases cell apoptosis, which is a potential factor affecting cell function. In particular, the macrophages exhibit up‐regulations in both M1 subtype related surface markers and pro‐inflammatory cytokines with the degradation process of PLGA, which indicates the degradation products of PLGA can convert macrophages to the pro‐inflammatory (M1) polarization state. All these findings provide the mechanism of PLGA‐induced inflammation and lay the foundation for the design of next‐generation PLGA‐based biomaterials endowed with immunomodulatory functions.     

Nitrogen addition,rather than altered precipitation,stimulates nitrous oxide emissions in an alpine steppe

Anthropogenic‐driven global change, including changes in atmospheric nitrogen (N) deposition and precipitation patterns, is dramatically altering N cycling in soil. How long‐term N deposition, precipitation changes, and their interaction influence nitrous oxide (N₂O) emissions remains unknown, especially in the alpine steppes of the Qinghai–Tibetan Plateau (QTP). To fill this knowledge gap, a platform of N addition (10 g m⁻² year⁻¹) and altered precipitation (±50% precipitation) experiments was established in an alpine steppe of the QTP in 2013. Long‐term N addition significantly increased N₂O emissions. However, neither long‐term alterations in precipitation nor the co‐occurrence of N addition and altered precipitation significantly affected N₂O emissions. These unexpected findings indicate that N₂O emissions are particularly susceptible to N deposition in the alpine steppes. Our results further indicated that both biotic and abiotic properties had significant effects on N₂O emissions. N₂O emissions occurred mainly due to nitrification, which was dominated by ammonia‐oxidizing bacteria, rather than ammonia‐oxidizing archaea. Furthermore, the alterations in belowground biomass and soil temperature induced by N addition modulated N₂O emissions. Overall, this study provides pivotal insights to aid the prediction of future responses of N₂O emissions to long‐term N deposition and precipitation changes in alpine ecosystems. The underlying microbial pathway and key predictors of N₂O emissions identified in this study may also be used for future global‐scale model studies.     

Managing vegetation in surface-flow wastewater-treatment wetlands for optimal treatment performance

Constructed wetlands that mimic natural marshes have been used as low-cost alternatives to conventional secondary or tertiary wastewater treatment in the U.S. for at least 30 years. However, the general level of understanding of internal treatment processes and their relation to vegetation and habitat quality has not grown in proportion to the popularity of these systems. We have studied internal processes in surface-flow constructed wastewater-treatment wetlands throughout the southwestern U.S. since 1990. At any given time, the water quality, hydraulics, water temperature, soil chemistry, available oxygen, microbial communities, macroinvertebrates, and vegetation each greatly affect the treatment capabilities of the wetland. Inside the wetland, each of these components plays a functional role and the treatment outcome depends upon how the various components interact. Vegetation plays a uniquely important role in water treatment due to the large number of functions it supports, particularly with regard to nitrogen transformations. However, it has been our experience that vegetation management is critical for achieving and sustaining optimal treatment function. Effective water treatment function and good wildlife quality within a surface-flow constructed wetland depend upon the health and sustainability of the vegetation. We suggest that an effective tool to manage and sustain healthy vegetation is the use of hummocks, which are shallow emergent plant beds within the wetland, positioned perpendicular to the water flow path and surrounded by water sufficiently deep to limit further emergent vegetation expansion. In this paper, we describe the use of a hummock configuration, in conjunction with seasonal water level fluctuations, to manage the vegetation and maintain the treatment function of wastewater-treatment wetlands on a sustainable basis.     

The effect of carbamazepine on bone structure and strength in control and osteogenesis imperfecta (Col1a2 +/p.G610C ) mice

The inherited brittle bone disease osteogenesis imperfecta (OI) is commonly caused by COL1A1 and COL1A2 mutations that disrupt the collagen I triple helix. This causes intracellular endoplasmic reticulum (ER) retention of the misfolded collagen and can result in a pathological ER stress response. A therapeutic approach to reduce this toxic mutant load could be to stimulate mutant collagen degradation by manipulating autophagy and/or ER‐associated degradation. Since carbamazepine (CBZ) both stimulates autophagy of misfolded collagen X and improves skeletal pathology in a metaphyseal chondrodysplasia model, we tested the effect of CBZ on bone structure and strength in 3‐week‐old male OI Col1a2 ^+/p.G610C and control mice. Treatment for 3 or 6 weeks with CBZ, at the dose effective in metaphyseal chondrodysplasia, provided no therapeutic benefit to Col1a2 ^+/p.G610C mouse bone structure, strength or composition, measured by micro‐computed tomography, three point bending tests and Fourier‐transform infrared microspectroscopy. In control mice, however, CBZ treatment for 6 weeks impaired femur growth and led to lower femoral cortical and trabecular bone mass. These data, showing the negative impact of CBZ treatment on the developing mouse bones, raise important issues which must be considered in any human clinical applications of CBZ in growing individuals.     

Soil physicochemical properties drive the variation in soil microbial communities along a forest successional series in a degraded wetland in northeastern China

The Sanjiang Plain is the biggest freshwater wetland locating in northeastern China. Due to climate change and human activities, that wetland has degraded to a successional gradient from the original flooded wetland to dry shrub vegetation and a forest area with lower ground water level, which may result in changes in soil microbiologic structure and functions. The present study investigated the microbial diversity and community structure in relation to soil properties along that successional gradient. The soil physico‐chemical properties changed significantly with degradation stage. The Shannon diversity index of both soil bacteria (5.90–6.42) and fungi (1.7–4.19) varied significantly with successional stage (both p < .05). The community structures of soil bacteria and fungi in the early successional stages (i.e., the wetland) were significantly determined by water content, total nitrogen, and available nitrogen concentrations in soils, while those in the later successional stages (i.e., forests) were significantly structured by soil organic carbon, soil pH, and available phosphorus concentrations. These results suggest that the soil microbial structure is mainly determined by soil properties rather than by plant community such as plant species composition along successional stages.     

Protein quality control and regulated proteolysis in the genome‐reduced organism Mycoplasma pneumoniae

Protein degradation is a crucial cellular process in all‐living systems. Here, using Mycoplasma pneumoniae as a model organism, we defined the minimal protein degradation machinery required to maintain proteome homeostasis. Then, we conditionally depleted the two essential ATP‐dependent proteases. Whereas depletion of Lon results in increased protein aggregation and decreased heat tolerance, FtsH depletion induces cell membrane damage, suggesting a role in quality control of membrane proteins. An integrative comparative study combining shotgun proteomics and RNA‐seq revealed 62 and 34 candidate substrates, respectively. Cellular localization of substrates and epistasis studies supports separate functions for Lon and FtsH. Protein half‐life measurements also suggest a role for Lon‐modulated protein decay. Lon plays a key role in protein quality control, degrading misfolded proteins and those not assembled into functional complexes. We propose that regulating complex assembly and degradation of isolated proteins is a mechanism that coordinates important cellular processes like cell division. Finally, by considering the entire set of proteases and chaperones, we provide a fully integrated view of how a minimal cell regulates protein folding and degradation.     

Variation in wetland seed banks across a tidal freshwater landscape

Almost nothing is known about landscape-level variation in seed bank composition across complexes of hydrologically connected wetlands. We examined species composition of seed and spore banks in three habitats of tidal freshwater wetlands (marshes, swamp hollows, and swamp hummocks) along 48 km of tributaries throughout the tidal freshwater portions of the Nanticoke River watershed (Maryland and Delaware). Taxa and seedling density decreased with increasing distance upstream in the swamp hollows and hummocks, but increased or remained constant proceeding upstream in the marshes. Species rarefaction curves indicated equal taxa richness (28) between marshes and swamp hummocks at 175 individuals, with lower richness in swamp hollows (19). However, communities in swamp hollows were patchier and had an estimated total taxa richness of 52, similar to the marshes (50) and higher than swamp hummocks (41). Coefficients of variation for seedling emergence densities (136-180%) were greater than those of published seed bank studies conducted at smaller spatial scales in tidal freshwater marshes (36-117%). Our literature searches suggest that ours is the first study to document significant spatial trends in seed bank diversity and density across a wetland landscape.     

Micro‐CT reconstruction reveals the colony pattern regulations of four dominant reef‐building corals

Colonies are the basic geometric building blocks of coral reefs. However, the forming regulations of both colonies and reefs are still not understood adequately. Therefore, in this study, we reconstructed 25 samples using high‐resolution micro‐computed tomography to investigate coral growth patterns and parameters. Our skeleton and canal reconstructions revealed the characteristics of different coral species, and we further visualized the growth axes and growth rings to understand the coral growth directions. We drew a skeleton grayscale map and calculated the coral skeleton void ratios to ascertain the skeletal diversity, devising a method to quantify coral growth. On the basis of the three‐dimensional (3D) reconstructions and growth parameters, we investigated the growth strategies of different coral species. This research increases the breadth of knowledge on how reef‐building corals grow their colonies, providing information on reef‐forming regulations. The data in this paper contain a large amount of coral growth information, which can be used in further research on reef‐forming patterns under different conditions. The method used in this study can also be applied to animals with porous skeletons.     

miR‐4286 functions in osteogenesis and angiogenesis via targeting histone deacetylase 3 and alleviates alcohol‐induced bone loss in mice

ObjectivesAlcohol consumption is one of the leading factors contributing to premature osteopenia. MicroRNA (miRNA) coordinates a cascade of anabolic and catabolic processes in bone homeostasis and dynamic vascularization. The aim was to investigate the protective role of miR‐4286 in alcohol‐induced bone loss and its mechanism.Materials and MethodsThe effect of miR‐4286 and alcohol on bone mesenchymal stem cells (BMSCs) and human umbilical vein endothelial cells (HUVECs) was explored via multiple in vitro assays, including cell proliferation, QPCR, Western blot, osteogenesis, angiogenesis etc miR‐4286 directly regulated HDAC3 was investigated by luciferase reporter assay, and the function of HDAC3 was also explored in vitro. Moreover, alcohol‐induced bone loss in mice was established to reveal the preventive effect of miR‐4286 by radiographical and histopathological assays.ResultsIn vitro, ethanol dramatically inhibited the proliferation and osteogenesis of BMSCs, and substantially impaired the proliferation and vasculogenesis of HUVECs. However, a forced overexpression of miR‐4286 within BMSCs and HUVECs could largely abolish inhibitory effects by alcohol. Furthermore, alcohol‐induced inhibition on osteogenic and vasculogenic functions was mediated by histone deacetylase 3 (HDAC3), and dual‐luciferase reporter assay showed that HDAC3 was the direct binding target of miR‐4286. In vivo, micro‐CT scanning and histology assessment revealed that miR‐4286 could prevent alcohol‐induced bone loss.ConclusionsWe firstly demonstrated that miR‐4286 might function via intimate osteogenesis‐angiogenesis pathway to alleviate alcohol‐induced osteopenia via targeting HDAC3.     

Putting the brakes on phagocytosis: “don't‐eat‐me” signaling in physiology and disease

Timely removal of dying or pathogenic cells by phagocytes is essential to maintaining host homeostasis. Phagocytes execute the clearance process with high fidelity while sparing healthy neighboring cells, and this process is at least partially regulated by the balance of “eat‐me” and “don''t‐eat‐me” signals expressed on the surface of host cells. Upon contact, eat‐me signals activate “pro‐phagocytic” receptors expressed on the phagocyte membrane and signal to promote phagocytosis. Conversely, don''t‐eat‐me signals engage “anti‐phagocytic” receptors to suppress phagocytosis. We review the current knowledge of don''t‐eat‐me signaling in normal physiology and disease contexts where aberrant don''t‐eat‐me signaling contributes to pathology.     

长江黄河源区湿地分布的时空变化及成因

通过整理解译1969年航片、1986年、2000年、2007年以及2013年TM影像数据,对长江黄河源区的高寒湿地分布的时空变化特征进行分析,并结合气象观测数据和人类活动状况,运用主成分分析和灰色关联度法定量分析造成高寒湿地退化的气候因素和人为因素的贡献,并揭示了高寒湿地退化与各环境因子之间的关联性。结果表明:1969年—2013年间,江河源区的高寒湿地面积减少了19.16%,各湿地类型的斑块分离度不断增大;空间上,高寒湿地的退化区主要分布在长江源区的东北部以及黄河源区的北部地区,与该区域冻土的退化有显著的一致性;1969年以来,江河源区的气候呈气温显著上升、相对湿度降低以及降水量微弱增加的暖干化趋势,湿地的退化与气候变化在时间上有明显的同步性,其中气温升高是形成湿地退化格局的主要原因,降水量和相对湿度的变化会对湿地的变化产生重要影响,尤其是对河流和湖泊的影响更为显著;此外,载畜量的变化是影响湿地变化最重要的人为因素。     

Do predators have a role to play in wetland ecosystem functioning? An experimental study in New England salt marshes

The historical ecological paradigm of wetland ecosystems emphasized the role of physical or “bottom‐up” factors in maintaining functions and services. However, recent studies have shown that the loss of predators in coastal salt marshes can lead to a significant reduction in wetland extent due to overgrazing of vegetation by herbivores. Such studies indicate that consumers or “top‐down” factors may play a much larger role in the maintenance of wetland ecosystems than was previously thought. The objective of this study was to evaluate whether altering top‐down control by manipulating the presence of predators can lead to measurable changes in salt marsh ecosystem properties. Between May and August of 2015 and 2016, we established exclosure and enclosure cages within three New England coastal wetland areas and manipulated the presence of green crab predators to assess how they and their fiddler and purple marsh crab prey affect changes in ecosystem properties. Predator presence was associated with changes in soil nitrogen and aboveground biomass at two of the three field sites, though the magnitude and direction of these effects varied from site to site. Further, path analysis results indicate that across field sites, a combination of bottom‐up and top‐down factors influenced changes in measured variables. These results challenge the growing consensus that consumers have strong effects, indicating instead that predator impacts may be highly context‐dependent.     

The needs of a synapse—How local organelles serve synaptic proteostasis

Synaptic function crucially relies on the constant supply and removal of neuronal membranes. The morphological complexity of neurons poses a significant challenge for neuronal protein transport since the machineries for protein synthesis and degradation are mainly localized in the cell soma. In response to this unique challenge, local micro‐secretory systems have evolved that are adapted to the requirements of neuronal membrane protein proteostasis. However, our knowledge of how neuronal proteins are synthesized, trafficked to membranes, and eventually replaced and degraded remains scarce. Here, we review recent insights into membrane trafficking at synaptic sites and into the contribution of local organelles and micro‐secretory pathways to synaptic function. We describe the role of endoplasmic reticulum specializations in neurons, Golgi‐related organelles, and protein complexes like retromer in the synthesis and trafficking of synaptic transmembrane proteins. We discuss the contribution of autophagy and of proteasome‐mediated and endo‐lysosomal degradation to presynaptic proteostasis and synaptic function, as well as nondegradative roles of autophagosomes and lysosomes in signaling and synapse remodeling. We conclude that the complexity of neuronal cyto‐architecture necessitates long‐distance protein transport that combines degradation with signaling functions.