Using Soil 13C to Detect the Historic Presence of Schizachyrium scoparium (Little Bluestem) Grasslands on Martha's Vineyard

Abstract We used differences in soil carbon δ¹³C values between forested sites and grasslands dominated by the C₄ grass Schizachyrium scoparium (little bluestem) to detect the presence of former grasslands in the historical landscape of the coastal sand plain of Martha's Vineyard, Massachusetts, U.S.A. Soil δ¹³C was measured at (1) sites with long‐term forest or grassland vegetation and (2) sites with known histories where forest vegetation invaded grassland and where forest converted to grassland. The δ¹³C of soil under long‐term grassland was –24.1‰ at 0 to 2 cm depth and –23.4‰ at 2 to 10 cm and was enriched by 3.4‰ and 2.8‰ compared with soil under long‐term forest. In forests that invaded grasslands dominated by S. scoparium, soil δ¹³C decreased as C derived from trees replaced C from S. scoparium. This decline occurred faster in surface soils and in the light soil organic matter fraction than in the mineral soil. In forests that converted to grasslands, soil δ¹³C increased and the rate of increase was similar in surface and mineral soil and in the different soil organic matter fractions. Rates of change indicated that soil δ¹³C could be used to detect changes in vegetation involving the presence or absence of S. scoparium during the last 150 years. Application of this model to a potential grassland restoration site on Martha's Vineyard where the landscape history was not known indicated that the site was previously unoccupied by S. scoparium during this time. The δ¹³C of surface mineral soil can be useful for detecting the presence of historic S. scoparium grasslands but only in the period well after European settlement of these coastal sand plain landscapes.     

Carbon: freshwater plants

δ¹³C values for freshwater aquatic plant matter varies from ?11 to ?50‰ and is not a clear indicator of photosynthetic pathway as in terrestrial plants. Several factors affect δ¹³C of aquatic plant matter. These include: (1) The δ¹³C signature of the source carbon has been observed to range from +1‰ for HCO₃^? derived from limestone to ?30‰ for CO₂ derived from respiration. (2) Some plants assimilate HCO₃^?, which is –7 to –11‰ less negative than CO₂. (3) C₃, C₄, and CAM photosynthetic pathways are present in aquatic plants. (4) Diffusional resistances are orders of magnitude greater in the aquatic environment than in the aerial environment. The greater viscosity of water acts to reduce mixing of the carbon pool in the boundary layer with that of the bulk solution. In effect, many aquatic plants draw from a finite carbon pool, and as in terrestrial plants growing in a closed system, biochemical discrimination is reduced. In standing water, this factor results in most aquatic plants having a δ¹³C value similar to the source carbon. Using Farquhar's equation and other physiological data, it is possible to use δ¹³C values to evaluate various parameters affecting photosynthesis, such as limitations imposed by CO₂ diffusion and carbon source.     

A Study of the Decomposition of Reed (Phragmites australis ) as a Possible Source of Aquatic Humic Substances by Measuring the Natural Abundance of Stable Carbon Isotopes

The decomposition of leaf and steam litter of reed (P. australis) was measured both in the field and in the laboratory. The breakdown rates, the total carbon and the stable carbon isotope dynamics of reed litter were determined. The stable carbon isotope ratios of isolated humic substances (fulvic and humic acids) were also analysed. The δ¹³C value in reed remains increased from –26‰ to –24‰ for stems and from –27‰ to –26‰ for leaves. The dissolved fulvic and humic acids isolated from the experimental bottles (mean δ¹³C was –27.6‰) and the reservoir water were depleted in ¹³C (mean δ¹³C was –28.6‰) relative to the reed remains. The results show that reed litter is an important source of coloured aquatic humic substances. (© 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Carbon (δ13C) and nitrogen (δ15N) stable isotope composition in plant and soil in Southern Patagonia's native forests

Stable isotope natural abundance measurements integrate across several biogeochemical processes in ecosystem N and C dynamics. Here, we report trends in natural isotope abundance (δ¹³C and δ¹⁵N in plant and soil) along a climosequence of 33 Nothofagus forest stands located within Patagonia, Southern Argentina. We measured 28 different abiotic variables (both climatic variables and soil properties) to characterize environmental conditions at each of the 33 sites. Foliar δ¹³C values ranged from ?35.4‰ to ?27.7‰, and correlated positively with foliar δ¹⁵N values, ranging from ?3.7‰ to 5.2‰. Soil δ¹³C and δ¹⁵N values reflected the isotopic trends of the foliar tissues and ranged from ?29.8‰ to ?25.3‰, and ?4.8‰ to 6.4‰, respectively, with no significant differences between Nothofagus species (Nothofagus pumilio, Nothofagus antarctica, Nothofagus betuloides). Principal component analysis and multiple regressions suggested that mainly water availability variables (mean annual precipitation), but not soil properties, explained between 42% and 79% of the variations in foliar and soil δ¹³C and δ¹⁵N natural abundance, which declined with increased moisture supply. We conclude that a decline in water use efficiency at wetter sites promotes both the depletion of heavy C and N isotopes in soil and plant biomass. Soil δ¹³C values were higher than those of the plant tissues and this difference increased as annual precipitation increased. No such differences were apparent when δ¹⁵N values in soil and plant were compared, which indicates that climatic differences contributed more to the overall C balance than to the overall N balance in these forest ecosystems.     

Isotopic biosignatures in carbonate‐rich,cyanobacteria‐dominated microbial mats of the Cariboo Plateau,B.C.

Photosynthetic activity in carbonate‐rich benthic microbial mats located in saline, alkaline lakes on the Cariboo Plateau, B.C. resulted in pCO₂ below equilibrium and δ¹³C_DIC values up to +6.0‰ above predicted carbon dioxide (CO₂) equilibrium values, representing a biosignature of photosynthesis. Mat‐associated δ¹³C_carb values ranged from ~4 to 8‰ within any individual lake, with observations of both enrichments (up to 3.8‰) and depletions (up to 11.6‰) relative to the concurrent dissolved inorganic carbon (DIC). Seasonal and annual variations in δ¹³C values reflected the balance between photosynthetic ¹³C‐enrichment and heterotrophic inputs of ¹³C‐depleted DIC. Mat microelectrode profiles identified oxic zones where δ¹³C_carb was within 0.2‰ of surface DIC overlying anoxic zones associated with sulphate reduction where δ¹³C_carb was depleted by up to 5‰ relative to surface DIC reflecting inputs of ¹³C‐depleted DIC. δ¹³C values of sulphate reducing bacteria biomarker phospholipid fatty acids (PLFA) were depleted relative to the bulk organic matter by ~4‰, consistent with heterotrophic synthesis, while the majority of PLFA had larger offsets consistent with autotrophy. Mean δ¹³C_org values ranged from ?18.7 ± 0.1 to ?25.3 ± 1.0‰ with mean Δ¹³C_inorg‐org values ranging from 21.1 to 24.2‰, consistent with non‐CO₂‐limited photosynthesis, suggesting that Precambrian δ¹³C_org values of ~?26‰ do not necessitate higher atmospheric CO₂ concentrations. Rather, it is likely that the high DIC and carbonate content of these systems provide a non‐limiting carbon source allowing for expression of large photosynthetic offsets, in contrast to the smaller offsets observed in saline, organic‐rich and hot spring microbial mats.     

Influence of long-term CO2 storage on δ13C in vials capped with butyl and butyl/PTFE caps and the relevance for ecological samples

Background

The carbon (C) isotope signature of solid materials such as plants and soil, or gaseous samples (atmospheric or soil air), can be used as a useful tool for investigations of the C cycle. In gaseous samples, stability of δ¹³C of carbon dioxide (CO₂) in air during storage represents a problem.

Methods

We tested the long-term storage effect of δ¹³C originated from CO₂ in vials both capped with butyl or butyl coated with polytetrafluoroethylene (PTFE) on the internal surface. Therefore, pure CO₂, depleted in ¹³C, was stored for up to 736 days. In addition, the relevance of long-term storage for ecological soil air data collected from a free-air CO₂ enrichment (FACE) experiment located in Stuttgart (Germany) during one growing period with a maximum storage period of 210 days was judged.

Results

With increasing storage time, a change in isotopic composition towards less depleted δ¹³C was observed. The changes in δ¹³C were highest at the beginning of the storage period and decreased over time, which could be described with an asymptotic model. The maximum change in δ¹³C was less than 2?‰ and lower for vials capped with butyl/PTFE septa. In the FACE experiment, the comparison between corrected and uncorrected data showed that δ¹³C originated from soil air changed within this data set by up to 1?‰. The calculation of the fraction of plant derived C resulted in an underestimation of up to 10 %.

Conclusion

The storage effect should be taken into consideration when interpreting δ¹³C values in order to avoid miscalculations.     

Diffusive fractionation complicates isotopic partitioning of autotrophic and heterotrophic sources of soil respiration

Carbon isotope ratios (δ¹³C) of heterotrophic and rhizospheric sources of soil respiration under deciduous trees were evaluated over two growing seasons. Fluxes and δ¹³C of soil respiratory CO₂ on trenched and untrenched plots were calculated from closed chambers, profiles of soil CO₂ mole fraction and δ¹³C and continuous open chambers. δ¹³C of respired CO₂ and bulk carbon were measured from excised leaves and roots and sieved soil cores. Large diel variations (>5‰) in δ¹³C of soil respiration were observed when diel flux variability was large relative to average daily fluxes, independent of trenching. Soil gas transport modelling supported the conclusion that diel surface flux δ¹³C variation was driven by non‐steady state gas transport effects. Active roots were associated with high summertime soil respiration rates and around 1‰ enrichment in the daily average δ¹³C of the soil surface CO₂ flux. Seasonal δ¹³C variability of about 4‰ (most enriched in summer) was observed on all plots and attributed to the heterotrophic CO₂ source.     

Can stable carbon isotopes (δ13C) in soil carbon be used to describe the dynamics of Eucalyptus savanna–rainforest boundaries in the Australian monsoon tropics?

The history of isolated patches of monsoon rainforest within large tracts of Eucalyptus savanna is poorly understood because of the scarcity of reliable palaeoecological records in the Australian monsoon tropics. Elsewhere in the world, the ratio of the stable isotopes ¹³C to ¹²C (δ¹³C) in soil organic matter has shed light on the dynamics of rainforest–savanna boundaries because tropical grasses with the C4 photosynthetic pathway have a distinct δ¹³C signature (–17 to –9‰) compared with that of woody plants with the C3 photosynthetic pathway (–32 to –22‰). In order to determine the magnitude of the variation in δ¹³C, unreplicated soil profiles were sampled beneath different vegetation types on three boundaries between Eucalyptus savanna and rainforest that were both growing on Tertiary age laterite parent material. Replicated (n = 3) soil profiles, which were also derived from Tertiary age laterite, were sampled from beneath: (i) dense stands of African grasses within a frequently burnt Eucalyptus savanna; and within the same long unburnt Eucalyptus savanna, (ii) patches of African and natives grasses and (iii) clumps of Acacia trees. The strongly negative δ¹³C values of soil organic matter derived from the frequently burnt and long unburnt grassy understoreys in the Eucalyptus savannas showed that a considerable amount of the soil carbon was derived from C3 (woody) species despite the presence of a ground layer dominated by C4 grasses. However, a feature of these data was the considerable variability among the three ‘replicate’ profiles. The surface soil samples from beneath three clumps of Acacia trees in the unburnt Eucalyptus savanna had much less variable δ¹³C values and were similar to two of the three monsoon rainforests sampled. The pattern of δ¹³C values from unreplicated soil profiles from different vegetation types across three rainforest boundaries was also very variable and not always obviously related the known disturbance history of the extant vegetation. Given the considerable variability within and between vegetation types with contrasting disturbance histories, it is concluded that the use of carbon stable isotopes to advance understanding of the dynamics of rainforest and Eucalyptus savanna boundaries will require further development, such as determination of the ¹⁴C age and δ¹³C values of different soil carbon fractions.     

Stable isotopic (δ13C and δ18O) signatures of biogenic calcretes marking discontinuity surfaces: a case study from Upper Cretaceous carbonates of central Dalmatia and eastern Istria,Croatia

Biogenic calcretes associated with a regional Cretaceous to Paleogene subaerial unconformity and an intraformational composite (polygenic) surface in Upper Cretaceous intra-platform peritidal successions in central Dalmatia and eastern Istria, Croatia (Adriatic-Dinaridic Carbonate Platform), were analyzed for their δ¹³C and δ¹⁸O signatures in order to provide insight into the conditions of subaerial exposure and calcrete development. The distinctly negative δ¹³C signatures of biogenic calcretes marking the regional subaerial unconformity differ considerably from the δ¹³C values of the host marine limestones. This indicates carbon isotope exchange of primary marine CaCO₃ with CO₂ released by root and rhizomicrobial respiration and subsequent precipitation of pedogenic calcrete. The range of δ¹³C (from ?13.1 to ?8.2 ‰ Vienna PeeDee Belemnite standard, VPDB) and δ¹⁸O (from ?10.1 to ?6.1 ‰ VPDB) values of calcretes are similar to those reported from calcretes elsewhere, and the δ¹³C values of biogenic calcretes with typical Microcodium aggregates (?13.1 to ?12.3 ‰ VPDB) at the ?ibenik locality are very close to, or at the lower limit of, values for soil carbonates formed in isotopic equilibrium with soil CO₂. These values are expected for authigenic pedogenic carbonates formed under the influence of C₃ plant communities, without influence from heavier carbon from pre-existing carbonate and lack of input of atmospheric CO₂. Such low δ¹³C values support the interpretation of Microcodium aggregates as being precipitated under a direct biological control within the soil, although the relationship between formation mechanisms and stable isotope signatures of Microcodium needs further investigation. The δ¹³C values (?4.4 to ?3.6 ‰ VPDB) of rhizogenic calcretes formed inside firmground Thalassinoides burrows of the composite surface at the ?ibenik locality are more negative than the δ¹³C values of the host marine limestones, which confirms that the composite surface went through a phase of meteoric pedo(dia)genesis. However, the overall δ¹³C values of calcretes are less negative than expected, which might reflect contamination from associated primary marine carbonate. This study represents the first detailed stable isotope investigation of calcretes from carbonate successions of the External Dinarides, and the results may be applied to discontinuities present in other shallow-water carbonate rock successions.     

δ13C of CO2 respired in the dark in relation to δ13C of leaf metabolites: comparison between Nicotiana sylvestris and Helianthus annuus under drought

The variations of δ¹³C in leaf metabolites (lipids, organic acids, starch and soluble sugars), leaf organic matter and CO₂ respired in the dark from leaves of Nicotiana sylvestris and Helianthus annuus were investigated during a progressive drought. Under well‐watered conditions, CO₂ respired in the dark was ¹³C‐enriched compared to sucrose by about 4‰ in N. sylvestris and by about 3‰ and 6‰ in two different sets of experiments in H. annuus plants. In a previous work on cotyledonary leaves of Phaseolus vulgaris, we observed a constant ¹³C‐enrichment by about 6‰ in respired CO₂ compared to sucrose, suggesting a constant fractionation during dark respiration, whatever the leaf age and relative water content. In contrast, the ¹³C‐enrichment in respired CO₂ increased in dehydrated N. sylvestris and decreased in dehydrated H. annuus in comparison with control plants. We conclude that (i) carbon isotope fractionation during dark respiration is a widespread phenomenon occurring in C₃ plants, but that (ii) this fractionation is not constant and varies among species and (iii) it also varies with environmental conditions (water deficit in the present work) but differently among species. We also conclude that (iv) a discrimination during dark respiration processes occurred, releasing CO₂ enriched in ¹³C compared to several major leaf reserves (carbohydrates, lipids and organic acids) and whole leaf organic matter.     

Species-specific differences in temporal and spatial variation in δ13C of plant carbon pools and dark-respired CO2 under changing environmental conditions

Stable carbon isotope signatures are often used as tracers for environmentally driven changes in photosynthetic δ¹³C discrimination. However, carbon isotope signatures downstream from carboxylation by Rubisco are altered within metabolic pathways, transport and respiratory processes, leading to differences in δ¹³C between carbon pools along the plant axis and in respired CO₂. Little is known about the within-plant variation in δ¹³C under different environmental conditions or between species. We analyzed spatial, diurnal, and environmental variations in δ¹³C of water soluble organic matter (δ¹³C_WSOM) of leaves, phloem and roots, as well as dark-respired δ¹³CO₂ (δ¹³C_res) in leaves and roots. We selected distinct light environments (forest understory and an open area), seasons (Mediterranean spring and summer drought) and three functionally distinct understory species (two native shrubs—Halimium halimifolium and Rosmarinus officinalis—and a woody invader—Acacia longifolia). Spatial patterns in δ¹³C_WSOM along the plant vertical axis and between respired δ¹³CO₂ and its putative substrate were clearly species specific and the most δ¹³C-enriched and depleted values were found in δ¹³C of leaf dark-respired CO₂ and phloem sugars, ~?15 and ~?33 ‰, respectively. Comparisons between study sites and seasons revealed that spatial and diurnal patterns were influenced by environmental conditions. Within a species, phloem δ¹³C_WSOM and δ¹³C_res varied by up to 4 ‰ between seasons and sites. Thus, careful characterization of the magnitude and environmental dependence of apparent post-carboxylation fractionation is needed when using δ¹³C signatures to trace changes in photosynthetic discrimination.     

Age and source of different forms of carbon released from boreal peatland streams during spring snowmelt in E. Finland

Isotopic data are increasingly being used to quantify and understand the processes that control the release of carbon (C) from northern peatlands. We used δ¹³C and ¹⁴C measurements to investigate the source and age of different forms of aquatic C (DOC, POC and evasion CO₂) released from 2 contrasting (undrained v drained) forested peatland catchments at the end of the winter snowmelt period in boreal E Finland. The δ¹³C_VPDB values of DOC (range ?28.3 to ?28.8 ‰) were generally more ¹³C depleted than evasion CO₂ (range ?22.7 to ?31.5 ‰) and showed no clear differences between the pre-flood, flood and post-flood periods. Both forms of C had evidence of bomb-¹⁴C (i.e. >100%modern), indicating that they contained substantial quantities of C fixed since the mid AD 1950s. However, DOC was ¹⁴C enriched compared to evasion CO₂, with ¹⁴C concentrations suggesting that, on average, DOC-C was ~5–6 years younger than evasion CO₂–C, with the most recently fixed C being released when temperatures were highest. POC was significantly depleted in ¹⁴C with conventional (uncalibrated) radiocarbon ages of 805–1135 BP. In contrast to other studies, the isotopic compositions of DOC and evasion CO₂ were very similar, suggesting a predominantly single and consistent C source (decomposition of soil organic matter; SOM) during the snowmelt period. Whilst we found no evidence to suggest that old (pre-bomb) C was being released at the end of the winter period, the drained site was associated with more ¹⁴C depleted and ¹³C enriched evasion CO₂, suggesting a closer link to the atmospheric CO₂ pool. Our isotopic data suggest that the various forms of C released to the aquatic system from these forested Finnish peatlands are closely related, largely unaffected by drainage and (at least in the case of evasion CO₂ and DOC) indicate strong connectivity between C cycling in the soil–plant–water system.     

Carbon isotopic composition of lipid biomarkers from an endoevaporitic gypsum crust microbial mat reveals cycling of mineralized organic carbon

Microbial mats that inhabit gypsum deposits in ponds at Guerrero Negro, Baja California Sur, Mexico, developed distinct pigmented horizons that provided an opportunity to examine the fixation and flow of carbon through a trophic structure and, in conjunction with previous phylogenetic analyses, to assess the diagenetic fates of molecular δ¹³C biosignatures. The δ¹³C values of individual biomarker lipids, total carbon, and total organic carbon (TOC) were determined for each of the following horizons: tan‐orange (TO) at the surface, green (G), purple (P), and olive‐black (OB) at the bottom. δ¹³C of individual fatty acids from intact polar lipids (IPFA) in TO were similar to δ¹³C of dissolved inorganic carbon (DIC) in the overlying water column, indicating limited discrimination by cyanobacteria during CO₂ fixation. δ¹³C_TOC of the underlying G was 3‰ greater than that of TO. The most δ¹³C‐depleted acetogenic lipids in the upper horizons were the cyanobacterial biomarkers C₁₇ n‐alkanes and polyunsaturated fatty acids. Bishomohopanol was 4 to 7‰ enriched, relative to alkanes and intact polar fatty acids (IPFA), respectively. Acyclic C₂₀ isoprenoids were depleted by 14‰ relative to bishomohopanol. Significantly, ?[δ¹³C_TOC ? δ¹³C_∑IPFA] increased from 6.9‰ in TO to 14.7‰ in OB. This major trend might indicate that ¹³C‐enriched residual organic matter accumulated at depth. The permanently anoxic P horizon was dominated by anoxygenic phototrophs and sulfate‐reducing bacteria. P hosted an active sulfur‐dependent microbial community. IPFA and bishomohopanol were ¹³C‐depleted relative to upper crust by 7 and 4‰, respectively, and C₂₀ isoprenoids were somewhat ¹³C‐enriched. Synthesis of alkanes in P was evidenced only by ¹³C‐depleted n‐octadecane and 8‐methylhexadecane. In OB, the marked increase of total inorganic carbon δ¹³C (δ¹³C_TIC) of >6‰ perhaps indicated terminal mineralization. This δ¹³C_TIC increase is consistent with degradation of the osmolyte glycine betaine by methylotrophic methanogens and loss of ¹³C‐depleted methane from the mat.     

Isotope discrimination by form IC RubisCO from Ralstonia eutropha and Rhodobacter sphaeroides,metabolically versatile members of ‘Proteobacteria’ from aquatic and soil habitats

RubisCO, the CO₂ fixing enzyme of the Calvin–Benson–Bassham (CBB) cycle, is responsible for the majority of carbon fixation on Earth. RubisCO fixes ¹²CO₂ faster than ¹³CO₂ resulting in ¹³C-depleted biomass, enabling the use of δ¹³C values to trace CBB activity in contemporary and ancient environments. Enzymatic fractionation is expressed as an ε value, and is routinely used in modelling, for example, the global carbon cycle and climate change, and for interpreting trophic interactions. Although values for spinach RubisCO (ε = ~29‰) have routinely been used in such efforts, there are five different forms of RubisCO utilized by diverse photolithoautotrophs and chemolithoautotrophs and ε values, now known for four forms (IA, B, D and II), vary substantially with ε = 11‰ to 27‰. Given the importance of ε values in δ¹³C evaluation, we measured enzymatic fractionation of the fifth form, form IC RubisCO, which is found widely in aquatic and terrestrial environments. Values were determined for two model organisms, the ‘Proteobacteria’ Ralstonia eutropha (ε = 19.0‰) and Rhodobacter sphaeroides (ε = 22.4‰). It is apparent from these measurements that all RubisCO forms measured to date discriminate less than commonly assumed based on spinach, and that enzyme ε values must be considered when interpreting and modelling variability of δ¹³C values in nature.     

13C isotope fractionation during rhizosphere respiration of C3 and C4 plants

Stable carbon isotopes are used extensively to partition total soil CO₂ efflux into root-derived rhizosphere respiration or autotrophic respiration and soil-derived heterotrophic respiration. However, it remains unclear whether CO₂ from rhizosphere respiration has the same δ¹³C value as root biomass. Here we investigated the magnitude of ¹³C isotope fractionation during rhizosphere respiration relative to root biomass in six plant species. Plants were grown in a carbon-free sand-perlite medium inoculated with microorganisms from a farm soil for 62 days inside a greenhouse. We measured the δ¹³C value of rhizosphere respiration using a closed-circulation 48-hour CO₂ trapping method during 40~42 and 60~62 days after sowing. We found a consistent depletion in ¹³C (0.9~1.7‰) of CO₂ from rhizosphere respiration relative to root biomass in three C₃ species (Glycine max L. Merr., Helianthus annuus L. and Triticum aestivum L.), but a relatively large depletion in ¹³C (3.7~7.0‰) in three C₄ species (Amaranthus tricolor L., Sorghum bicolor (L.) Moench and Zea mays L. ssp. mays). Overall, our results indicate that CO₂ from rhizosphere respiration is more ¹³C-depleted than root biomass. Therefore, accounting for this ¹³C fractionation is required for accurately partitioning total soil CO₂ efflux into root-derived and soil-derived components using natural abundance stable carbon isotope methods.     

Spatial distribution of rhizodeposit carbon of maize (Zea mays L.) in soil aggregates assessed by multiple pulse 13C labeling in the field

Background and aims

Rhizosphere effect is controlled by spatial distribution of rhizodeposits, which may be influenced by soil aggregation and soil moisture regime in relation to water uptake by roots. The objectives of this study were to measure soil organic carbon (SOC) concentration and its δ¹³C abundance by aggregate size in the rooted bulk soil and by distance in the root-free soil vertically and horizontally away from roots, and to measure DOC concentration and its δ¹³C abundance in pore water in the rooted bulk soil after a seasonal pulse labelings of ¹³CO₂ to maize (Zea mays L.).

Methods

Pulse labeling was conducted in the field once a week for 11 weeks. Soil cells (50 mm in diameter and 100 mm long) mimicking root-free soils were imbedded vertically and horizontally 25–50 mm away from the main root of a maize crop. The rooted bulk soils were sampled to extract soil pore water at different suctions and to fractionate aggregates by wet sieving. The root-free soil cells were sliced by 1 mm intervals from the root end to 20 mm away. All the sampling was 12 days after the last labeling after the crop was harvested.

Results and discussion

The δ¹³C abundance before and after the continuous labeling was ?24.20?±?0.05?‰ and ?23.80?±?0.05?‰ in the rooted bulk soil. The labeling caused increases in δ¹³C abundance in all the aggregates in the rooted bulk soil and down to 14 mm away from the roots in both the root-free cells. The δ¹³C abundance was enriched in the >2 mm and 1–2 mm aggregates (?23.17?±?0.12?‰ and ?23.26?±?0.05?‰) though the SOC concentration was not different among the >0.25 mm aggregates, indicating that rhizodeposits or their metabolites were protected and distributed widely in whole soil through soil aggregation. The δ¹³C abundance in pore water (?24.0?±?0.01?‰) was much lower than those soil aggregates and greatest from the >2 μm soil pores though the DOC concentration was greater from the <20 μm soil pores. The δ¹³C abundance was in general greater in the horizontal cell than in the vertical cell. The δ¹³C abundance decreased with the increasing distance to the roots in the vertical cell and peaked at the 5 and 6 mm distance to the roots in the horizontal cell (?23.66?±?0.11?‰ and ?23.5?±?0.10?‰), possibly due to the drier condition unfavorable to microbial decomposition in the horizontal cell. The higher δ¹³C abundance in the horizontal cell than in the vertical cell was accompanied by a lower SOC concentration and a lower C: N ratio within 3 mm away from the roots, suggesting a stronger priming effect due to the longer residence time of rhizodeposits in the horizontal cell than in the vertical cell.

Conclusions

Rhizodeposits or their metabolites were protected during soil aggregation and distributed to 14 mm beyond the rhizosphere in the natural soil-plant system. This extension is of significance in regulating the formation of soil structure and the priming of soil organic matter during the whole life cycle of plants, which needs further study.     

Soil‐ and plant‐water dynamics in a C3/C4 grassland exposed to a subambient to superambient CO2 gradient

Plants may be more sensitive to carbon dioxide (CO₂) enrichment at subambient concentrations than at superambient concentrations, but field tests are lacking. We measured soil‐water content and determined xylem pressure potentials and δ¹³C values of leaves of abundant species in a C3/C4 grassland exposed during 1997–1999 to a continuous gradient in atmospheric CO₂ spanning subambient through superambient concentrations (200–560 µmol mol^2?1). We predicted that CO₂ enrichment would lessen soil‐water depletion and increase xylem potentials more over subambient concentrations than over superambient concentrations. Because water‐use efficiency of C3 species (net assimilation/leaf conductance; A/g) typically increases as soils dry, we hypothesized that improvements in plant‐water relations at higher CO₂ would lessen positive effects of CO₂ enrichment on A/g. Depletion of soil water to 1.35 m depth was greater at low CO₂ concentrations than at higher CO₂ concentrations during a mid‐season drought in 1998 and during late‐season droughts in 1997 and 1999. During droughts each year, mid‐day xylem potentials of the dominant C4 perennial grass (Bothriochloa ischaemum (L.) Keng) and the dominant C3 perennial forb (Solanum dimidiatum Raf.) became less negative as CO₂ increased from subambient to superambient concentrations. Leaf A/g—derived from leaf δ¹³C values—was insensitive to feedbacks from CO₂ effects on soil water and plant water. Among most C3 species sampled—including annual grasses, perennial grasses and perennial forbs—A/g increased linearly with CO₂ across subambient concentrations. Leaf and air δ¹³C values were too unstable at superambient CO₂ concentrations to reliably determine A/g. Significant changes in soil‐ and plant‐water relations over subambient to superambient concentrations and in leaf A/g over subambient concentrations generally were not greater over low CO₂ than over higher CO₂. The continuous response of these variables to CO₂ suggests that atmospheric change has already improved water relations of grassland species and that periodically water‐limited grasslands will remain sensitive to CO₂ enrichment.     

Vegetation dynamics in a Quercus‐Juniperus savanna: An isotopic assessment

Abstract. Woody plants are increasing in many grassland and savanna ecosystems around the world. As a case in point, the Edwards Plateau of Texas, USA, is a vast region (93 000 km²) in which rapid woody encroachment appears to be occurring. The native vegetation (prior to the Anglo‐European settlement 150–200 yr ago) and the biogeochemical consequences of woody encroachment in this region, however, are poorly understood. To assess these matters we measured plant and soil δ¹³C, soil organic C and soil N content from grasslands and two important woody patch types (mature Quercus virginiana clusters and Juniperus ashei woodlands) in this region. Soil δ¹³C values showed that relative productivity of C₃ species has increased in grassland and both woody habitats in recent times. δ¹³C of SOC in grasslands and Q. virginiana clusters increased with depth from the litter layer to 30 cm (grasslands =?21 to ?13‰Q. virginiana clusters =?27 to ?17‰) and were significantly different between habitats at all depths, indicating that Q. virginiana has been a long‐term component of the landscape. In J. ashei woodlands, soil δ¹³C values (at 20–30 cm depth) near the woodland edge (‐13‰) converged with those of an adjacent grassland (‐13‰) while those from the woodland interior (‐15‰) remained distinct, indicating that the woodland has been present for many years but has recently expanded. Concentrations and densities of SOC and total N were generally greater in woody patches than in grasslands. However, differences in the amount of SOC and N stored beneath the two woody patch types indicates that C and N sequestration potentials are species dependent.     

Environmental and genetic control of crassulacean acid metabolism in two crassulacean species and an F1 hybrid with differing biomass δ13C values

Abstract The growth, biomass δ¹³C values, and ability to accumulate titratable acidity at night were compared in eight environmental treatments for Cremnophila linguifolia, Sedum greggii, and their F₁ hybrid. In the phytotron, differences in treatment daylength, day/night temperature and water availability were all found to have effects on total plant dry weight, nocturnal accumulation of titratable acidity and biomass δ¹³C value of at least some of the genotypes. However, there were differences between the genotypes both in the magnitude and direction of response of the phenotypic properties to the treatment variables. The phytotron δ¹³C values ranged from -12.9 to -19.2‰ for C. linguifolia, from -22.2 to -33.4‰ for S. greggii, and from -19.2 to -24.9‰ for the hybrid. After with-holding water for 76 h both C. linguifolia and the hybrid had midday Ψ_leaf values of -0.23 MPa; however, S. greggii had a value of -1.05 MPa. In contrast to past observations of other species, the daily watered plants of C. linguifolia had less negative δ¹³C values than did the plants watered only weekly.     

Ecologically and geologically relevant isotope signatures of C,N, and S: okenone producing purple sulfur bacteria part I

Purple sulfur bacteria (PSB) are known to couple the carbon, nitrogen, and sulfur cycling in euxinic environments. This is the first study with multiple strains and species of okenone‐producing PSB to examine the carbon (C), nitrogen (N), and sulfur (S) metabolisms and isotopic signatures in controlled laboratory conditions, investigating what isotopic fractionations might be recorded in modern environments and the geologic record. PSB play an integral role in the ecology of euxinic environments and produce the unique molecular fossil okenane, derived from the diagenetic alteration of the carotenoid pigment okenone. Cultures of Marichromatium purpuratum 1591 (Mpurp1591) were observed to have carbon isotope fractionations (¹³ε_{biomass – CO2}), via RuBisCO, ranging from ?16.1 to ?23.2‰ during exponential and stationary phases of growth. Cultures of Thiocapsa marina 5653 (Tmar5653) and Mpurp1591 had a nitrogen isotope fractionation (¹⁵ε_{biomass – NH4}) of ?15‰, via glutamate dehydrogenase, measured and recorded for the first time in PSB. The δ³⁴S_VCDT values and amount of stored elemental sulfur for Mpurp1591 cells grown autotrophically and photoheterotrophically were dependent upon their carbon metabolic pathways. We show that PSB may contribute to the isotopic enrichments observed in modern and ancient anoxic basins. In a photoheterotrophic culture of Mpurp1591 that switched to autotrophy once the organic substrate was consumed, there were bulk biomass δ¹³C values that span a broader range than recorded across the Late Devonian, Permian–Triassic, Triassic–Jurassic, and OAE2 mass extinction boundaries . This finding stresses the complexities in interpreting and assigning δ¹³C values to bulk organic matter preserved in the geologic record.