Responses of mobile epifauna to small-scale seagrass patchiness: is fragmentation important?

Habitat fragmentation is a process involving splitting of continuous habitats into smaller, and more isolated habitat patches. To assess the effects of small-scale habitat patchiness and isolation without the confounding effect of habitat loss on benthic macrofauna, two field experiments were conducted in the Archipelago Sea, SW Finland. Using artificial seagrass units (ASUs) we contrasted continuous patches (“C”) with fragmented patches (“F”) of the same combined area as the continuous patches. The fragmentation treatment involved two isolation distances (0.5 and 3.0 m) between the ASUs (“F 0.5”) and (“F 3.0”). This design was repeated in two consecutive experiments where the patch area was 0.25 and 0.0625 m², respectively. Mobile epifauna were allowed to colonize patches for 12 days in both experiments. In both experiments, the total epifaunal density was significantly higher in the “F 0.5” treatment than in the “C” treatment, and the three dominant taxa showed positive or neutral responses to the habitat configuration. No fragmentation effect on the number of species was detected in either of the experiments, but fragmentation had a negative effect on the epifaunal diversity (Shannon’s H′) in the experiment with the largest patch area. Epifaunal diversity was significantly lower in “F 3.0” treatment than in “C” or “F 0.5” treatments in the first experiment, indicating stronger effect of isolation instead of fragmentation per se. Edge effects were indirectly tested by comparing epifaunal densities with patch edge:area ratios. The results suggest that edge effects may have a more important role than patch size for the total densities of epifaunal taxa, and that small, isolated patches have equal or higher habitat value compared to larger fragments.     

Selection of indicative taxa for river habitats: a case study on benthic macroinvertebrates using indicator species analysis and the random forest methods

The aim of the study was to evaluate the exclusivity and/or preference of macroinvertebrate taxa for river habitats. Indicator species analysis and random forests methods were applied to the data set of macroinvertebrate samples taken from 58 sampling points. Samples were classified according to habitat types defined by the position in a river channel and local hydraulic characteristics. 86 macroinvertebrate taxa were included in the analyses. High indicative values for habitats (importance value ≥50 and/or indicator value ≥40) were identified for 26 taxa. The results of both methods can be considered similar. Merged habitats of channel margin (margin of main channel and side arms) were mainly defined by “negative” indicator taxa (correct classification of given samples was caused by non-occurrence and low abundances of certain taxa in this habitat). In general, there was only a small group of taxa preferring these habitats. Taxa were not fully habitat specific because they mostly occurred in two or three habitat types. This could be the result of autecological plasticity of individual taxa and the connectivity among habitats. According to the experience from this case study, it can be concluded that both random forests and IndVal methods are suitable for the detection of indicative species, and random forests method has some additional advantages.     

Plantations of exotic tree species in Britain: irrelevant for biodiversity or novel habitat for native species?

Novel or emergent ecosystems arising from human action present both threats and opportunities for biodiversity. It has been suggested that exotic species can “facilitate” or “inhibit” native biodiversity through habitat modification. In Britain, there is a discussion over the contribution to biodiversity of plantations of exotic conifer species as these are commonly thought to have little relevancy as a habitat for native biodiversity. To address this we compared the species richness of a range of different taxonomic groups (lichens, bryophytes, fungi, vascular plants, invertebrates and songbirds) in exotic and native forest stands of differing structural stages in northern and southern Britain. In terms of overall native species-richness there was no significant difference between the exotic and the native stands. In the north, six species groups showed higher values in the exotic Sitka spruce (Picea sitchensis) stands with the remaining six showing higher values in the native Scots pine (Pinus sylvestris) stands. Most notably, lichen species richness was much lower in the exotic stands compared to the native stands, whereas bryophyte and fungal species richness was proportionately higher in the exotic stands. In the south, five species groups (all invertebrate taxa) showed higher species richness in exotic Norway spruce (Picea abies) stands compared to native oak (Quercus robur) stands. Five species groups had higher species-richness in the oak stands, in particular lichens and fungi. It is concluded that emergent ecosystems of exotic conifer species are not irrelevant to biodiversity. Where already well-established they can provide habitat for native species particularly if native woodland is scarce and biodiversity restoration is an immediate priority.     

Taxonomic and conservation status of a newly discovered giant landsnail from Mount Augustus,New Zealand

The Rhytidae (Mollusca; Gastropoda; Pulmonata) are a group of large carnivorous land snails distributed in the southern hemisphere, with a particularly rich fauna in New Zealand. The endemic genus Powelliphanta consists of at least 10 species and many more recognised subspecies, most of which are restricted to the western margin of South Island, New Zealand. Powelliphanta taxa tend to have restricted ecological and spatial ranges among the mountains of this region, with some species being limited to lowland forest and others to habitats at or above the treeline. Among recent discoveries is a population of snails occupying habitat on and around a peak called Mt Augustus, which is situated at the edge of a large and economically important coalfield. Since recognition of the potential biological significance of the Mt Augustus snails in 2004, almost all of their habitat has been destroyed by opencast mining revealing a direct conflict between economic and biodiversity prioritisation. Our analysis of mtDNA sequence data indicate Powelliphanta “Augustus” is a distinctive evolutionary lineage, more closely related to a nearby lowland species Powelliphanta lignaria than the spatial and ecological neighbour Powelliphanta patrickensis. Powelliphanta “Augustus” appears to be a specialised local endemic species. Despite a growing international awareness of the importance of biodiversity conservation, the demand for foreign earnings continues to take priority over the protection of our biota.     

Do seed and microsite limitation interact with seed size in determining invasion patterns in flooding Pampa grasslands?

Additive influences of the invasion ability of species (invasiveness) and the characteristics of the habitat which make it invasible (invasibility) cannot fully explain grassland invasion patterns. We tested the hypothesis that different species assemblages of grassland communities may partly result from interactive influences between the relative invasiveness of available species and community invasibility. During 10 months, we evaluated seed and microsite limitation of seedling emergence, survival, and recruitment of plants belonging to species with different seed size (large-seeded species vs. small-seeded species), with in a two-phase community mosaic typical of semi-natural grasslands in the southern flooding Pampa of Argentina. Seeds of large versus small-seeded species were sown either in species-poor patches dominated by a tall tussock grass (“pajonal”) or in species-rich patches dominated by short grasses (“matrix”), subjected to different levels of canopy disturbance (cut vs. uncut). Seed addition promoted seedling emergence for 7 out of the 10 species sown, and this effect was higher for large than for small-seeded species. After seed limitations were removed, interactive effects among seed size, community state and canopy disturbance reflected a strong positive influence of seed size on plant recruitment only in cut pajonal patches. Therefore, according to the stage of invasion process, relative species success may depend on non-interactive (seed-size effect on seed limitation to seedling emergence) or interactive influences among species invasibility and community invasiveness (from seedling emergence to plant recruitment). As a general conclusion, different assemblages of species are expected to successfully colonize spatially close grassland patches, according to both the available invasible species (seed size) and the community state and stage (species composition and canopy disturbance).     

A contribution to the rust flora (Uredinales) on Aizoaceae in southern Africa

Rust fungi on Aizoaceae in southern Africa have been examined and reported based on 27 specimens collected during a biodiversity study and previously collected herbarium specimens. Eight species including five new species have been recognized, and they are described in detail and illustrated. Together with two additional species in literature, ten species of rust fungi are now recognized on Aizoaceae in southern Africa. Part 223 in the series “Studies in Heterobasidiomycetes” from the Botanical Institute, University of Tübingen.     

Flying over water: how “On bird species diversity” influenced aquatic ecology

Habitat complexity has long been known to influence animal community structure by increasing the number of available habitats. Fifty years have passed since MacArthur brothers published the seminal paper “On bird species diversity”, which revolutionized studies of habitat structure. This paper first evidenced and quantified the relationship between species diversity (birds) and habitat structural complexity (the number of stratified layers of landscape vegetation). In this article, we aim to pay homage to R. H. MacArthur’s contribution and to briefly analyze the citation history and influence of “On bird species diversity”, focusing primarily on aquatic studies. We searched for all papers that cited “On bird species diversity” on Thomson Reuters (ISI—Web of Knowledge) and analyzed them for temporal citation trends. In addition, considering only aquatic papers, we explored whether and how habitat complexity was measured, as well as the ecological organization level, attributes of organisms, taxonomic groups and study design (observational or experimental). “On bird species diversity” citations increased over time, but this paper was less cited by limnologists compared to terrestrial and marine scientists. The majority of investigations in aquatic ecosystems quantified habitat complexity, but few used mathematical modeling. The high number of citations, which continues to increase, shows the great influence of “On bird species diversity” on ecological studies and typifies it as a classic in the ecological literature. However, the low citation frequency found in papers devoted to freshwater ecosystems indicates that limnologists in general neglect this original contribution in studies of habitat complexity.     

Quantitatively defining the conservation status of Natura 2000 forest habitats and improving management options for enhancing biodiversity

The main goal of Natura 2000 network is to guarantee the favourable conservation status of habitats and species ensuring European biodiversity. As a result, certain forest areas have been included in this network listed as 9230-Quercus pyrenaica habitat and 9340-Quercus ilex subsp. rotundifolia forest habitat. These areas were previously used for firewood extraction or livestock grazing and browsing. Nowadays these habitats are coppice forests with asexual regeneration, which is far from the desired conservation status. Traditional timber harvesting plans do not take account of the new objectives required for these Natura sites, which attempt to ensure biodiversity and recreational uses instead of simply focusing on timber production. This paper proposes a flexible methodology (applied to the study area “Dehesa Boyal” in ávila, Spain) for managing Natura 2000 forest sites by stands for sustainable forest management and the new requirements. The methodology has two phases. The first, “Division of the forest area into stands”, defines homogeneous patches of vegetation distinct in species composition, physiognomic structure and future management. The second, “Conservation status assessment of stands”, quantifies the conservation status of each previously classified stand considering a series of factors such as: functional health, restoration, floral richness and structure. A total value integrating the conservation status of stands is then calculated for the habitat. Both phases use Geographic Information System tools for managing information and visualizing results. The proposed methodology provides forest managers with a good knowledge of the territory and subsequently enables them to take appropriate conservation measures to maintain biodiversity.     

Coexistence of congeneric spiny lobsters on coral reefs: differences in conspecific aggregation patterns and their potential antipredator benefits

Den sharing by conspecific spiny lobsters (aggregation) is modulated by chemical attraction but may confer several, not necessarily mutually exclusive, antipredator byproduct benefits: a “guide effect”, which only benefits the individual attracted to a sheltered conspecific; a “dilution effect”, which reduces per-capita risk of predation simply through aggregation; or active “group defense”. Each potential benefit has a different set of predictors (relationships between aggregation and conspecific or predator densities), but conflicting results could suggest the simultaneous operation of more than one benefit. These predictions were tested for coexisting Panulirus guttatus (a reef-obligate) and Panulirus argus (a temporary reef-dweller) using data collected during 11 surveys on fixed sites over a coral reef in Mexico. P. guttatus greatly outnumbered P. argus, but P. argus showed a greater tendency to aggregate. All three benefits of den sharing operated for the more social P. argus, with “group defense” being of the most benefit for larger individuals, and the “guide” and “dilution” effects for smaller individuals recently immigrating into the reef habitat and sharing dens with larger conspecifics. P. guttatus did not display “group defense” and its aggregations appeared to be modulated by the interplay between attraction and aggressive behaviors. This species relied more on solitary crypticity, especially at larger sizes, but appeared to benefit from a “guide effect” at high conspecific densities. In experimental tanks, each species tended to aggregate when tested separately, but when tested jointly, aggregation among P. guttatus was significantly reduced. The experimental results reflect the differential patterns of aggregation between the fore-reef, where P. guttatus dominated, and the back-reef, where coexistence of both species was greater.     

Observations on spontaneous hand use in the common marmoset (Callithrix jacchus)

Four male and four female marmoset monkeys were observed to make a total of 5,600 “right”, “left”, or “both” hand responses over seven categories of spontaneous behaviour. Significant and consistent hand preferences were shown for the majority of monkeys in two of the categories of behaviour, but not in the other five. The paper considers some of the methodological difficulties involved in recording “handedness” in a species such as the common marmoset.     

Rocky bottom fauna in arctic Kongsfjord (Svalbard) studied by means of suction sampling and photography

The bottom fauna (16–30 m depth) of Kongsfjord (Svalbard) was investigated by direct observation, a SCUBA-diver operated suction sampler (quantitative) and underwater photography (semi-quantitative). The fauna on horizontal surfaces showed low similarity to that on vertical faces and overhangs, and had larger species heterogeneity between sampling sites. This was due to sedimentation and ice-rafted pebbles and stones creating “soft-bottom habitats” on the rocky bottom. Suction sampling resulted in collection of 73 taxa, including some species usually regarded as “soft-bottom” inhabitants. Fewer species were observed on the photographs, demonstrating the selectivity of this technique, but underwater photography may be a useful “non-destructive” method for obtaining information about conspicuous epifaunal taxa. Accepted: 18 July 2000     

Model of the assessment of the critical risk of extinction and the priorities of protection of endangered aquatic species at the national level

In the period 1995–2006, the biodiversity of the aquatic habitats in the area of Serbia was explored, with the aim to identify the endangered species of macroalgae, macroinvertebratae and fishes. During the work a data base was formed (Aquatic Ecosystems Diversity in Serbia, AEDSer), containing the data from exploring the biodiversity of the aquatic ecosystems of Serbia since 1860. Based on the data base, classification of the aquatic species was made into categories of endangerment based on IUCN criteria. The following was noted: (1) the global IUCN category assigned to the species often is not identical with the national status of endangerment; and (2) the species that are given a category of endangerment at the national level do not have the same realistic risk of extinction in all their habitats. This remark imposed the need for a model for assessing the critical risk of extinction of the endangered species and determining the priorities of their protection at the national level. Two categories of characters were used to develop the model: the characters that determine the degree of ecological specialisation of the species based on the circumstances of habitat; and the characters suggesting the risk factors from the system: “HIPPO” in the spatial and time dimension. The possibility to apply the model was tested on 10 aquatic species belonging to different categories of endangerment at the national level (macroalgae 2, macroinvertebrates 7, and fishes 1 species). The model based on points determined the level of extinction risk and, that way, the species needing urgent conservation from the same or different categories of endangerment were isolated. The model suggested can contribute to a more efficient defining the conservation priorities.     

Competitive reversals inside ecological reserves: the role of external habitat degradation

 Habitat degradation is the slow – and often subtle – deterioration in habitat quality that accompanies human activities through increases in road density, pesticide use, hunting pressure, etc. Such degradation is of particular concern in fragmented habitats where economic or jurisdictional boundaries rather than ecological ones determine the level of exploitation adjoining habitat patches endure. To examine the consequences habitat degradation might have on species interactions, we posited a patch of pristine habitat surrounded by “matrix” habitat whose degradation level was variable. Using a coupled pair of diffusive Lotka–Volterra competition equations with Robin (mixed) boundary conditions, we modeled the dynamics of two competing species inhabiting the pristine patch and incorporated matrix degradation through a tunable “hostility” parameter representing species’ mortality rates in the matrix. We found that the numerical range of competition coefficients over which one species is the competitive dominant and the other inferior may grow or shrink as matrix quality deteriorates. In some cases, degradation of the exterior habitat would bring about a complete competitive reversal inside the preserve. This result, wherein a formerly inferior species supplants a formerly dominant one – even inside the “protected” remnant patch itself – has policy implications for both nature reserve design and management of human activities outside park boundaries. Received: 30 April 1997     

Early Hominid diversity, age and biogeography of the Malawi-Rift

Remains of earlyHomo andParanthropus have been recovered from two contemporaneous sites (Uraha and Malema) in the “Hominid Corridor” in Northern Malawi (Chiwondo Beds). Faunal dating suggests an age of 2.5–2.3 Ma for both hominids. The two specimens, a mandible attributed toHomo rudolfensis (UR 501 from Uraha), and a maxillary fragment ofParanthropus boisci. (RC 911 from Malema) known only from eastern Africa, represent the southernmost known distribution of these taxa. The biogeographic significance of these hominids from the Malawi-Rift lay in their association with the eastern African endemic animal group. Biogeographic variation in south-eastern Africa may be linked to habitat change occurring due to climate change, with maximum change occurring around 2.5 Ma.     

Chilean Bromeliaceae: diversity, distribution and evaluation of conservation status

Chile is home to 23 species of Bromeliaceae, including 2 subspecies and 4 varieties. Twenty species are endemic to the country. We examined 883 herbarium specimens from 27 herbaria for our treatment of the Bromeliaceae for the “Flora de Chile”. These data and field observations resulted in a comprehensive database that we used to generate distribution maps for each species. We applied ecological niche modelling to reveal distribution areas and centers of Bromeliaceae diversity. We further analysed the collecting dates of the herbarium specimens to assess possible changes in species abundance. In this study we assess the conservation status of the bromeliad species in Chile. IUCN categories were assigned to the 27 bromeliad taxa as follows: Critically endangered: 4, Endangered: 6, Vulnerable: 11, Near threatened: 2, Least concern: 4. No species has become “Extinct” up to now. We also put forth a hypothesis about their biogeographic history.     

Ecological explanations for successful invasion of exotic plants

The intentional introduction of exotic species can increase the level of local biodiversity, enrich people’s material lives, and bring significant social and economic benefits that are also the symbols of human progress. However, along with the frequent intercourse among countries and regions, the frequency of uncontrolled crossregional migration of species is increased and there is a lack of scientific management strategy for the intentional introduction of exotic species. Exotic species invasion, which is behind habitat fragmentation, has become the second largest threatening factor to the maintenance of the global-scale level of biological diversity. Exotic species invasion can destroy the structure of an ecosystem, disturb the economic life of a society, and do harm to human health. In this paper, the authors review some of the ecological explanations for issues such as “what causes or mechanisms have led to the successful invasion of exotic species”, including the “ideal weeds characteristics”, “biodiversity resistance hypothesis”, “enemies release hypothesis”, “evolution of increased competitive ability hypothesis”, “niche opportunity hypothesis”, and “novel weapon hypothesis”. The authors also analyze and evaluate the background and theoretical basis of the hypotheses, providing explanations for some phenomena, as well as the deficiencies of these explanations.     

Systematics and genetic variation in commercial shape Kappaphycus and shape Eucheuma (Solieriaceae, Rhodophyta)

The systematics and taxonomy of Kappaphycus and Eucheuma (Solieriaceae) is confused and difficult due to morphological plasticity, lack of adequate characters to identify species and commercial names of convenience. These taxa are geographically widely dispersed through cultivation. Commercial, wild and herbarium sources were analysed; molecular markers provided insights into taxonomy and genetic variation, and where sources of genetic variation may be located. The mitochondrial cox2-3 and plastidal RuBisCo spacers were sequenced. There is a clear genetic distinction between K. alvarezii (“cottonii”) and K. striatum (“sacol”) samples. Kappaphycus alvarezii from Hawaii and some samples from Africa are also genetically distinct. Our data also show that all currently cultivated K. alvarezii from all over the world have a similar mitochondrial haplotype. Within Eucheuma denticulatum (“spinosum”) most African samples are again genetically distinct. Our data also suggest that currently cultivated E. denticulatum may have been “domesticated” several times, whereas this is not evident for the cultivated K. alvarezii. The present markers used do not distinguish all the morpho-types known in cultivation (e.g. var. tambalang, “giant” type) but do suggest that these markers may be useful to assess introductions and species identification in samples.     

Application of the IUCN Red Listing system to setting species targets for conservation planning purposes

Biodiversity targets, or estimates of the quantities of biodiversity features that should be conserved in a region, are fundamental to systematic conservation planning. We propose that targets for species should be based on the quantitative thresholds developed for the Vulnerable category of the IUCN Red List system, thereby avoiding future listings of species in an IUCN Red List threat category or an increase in the extinction risk, or ultimate extinction, of species already listed as threatened. Examples of this approach are presented for case studies from South Africa, including threatened taxa listed under the IUCN Red List criteria of A to D, a species listed as Near Threatened, a species of conservation concern due to its rarity, and one species in need of recovery. The method gives rise to multiple representation targets, an improvement on the often used single representation targets that are inadequate for long term maintenance of biodiversity or the arbitrary multiple representation and percentage targets that are sometimes adopted. Through the implementation of the resulting conservation plan, these targets will ensure that the conservation status of threatened species do not worsen over time by qualifying for higher categories of threat and may actually improve their conservation status by eliminating the threat of habitat loss and stabilizing population declines. The positive attributes ascribed to the IUCN Red List system, and therefore to the species targets arising from this approach, are important when justifying decisions that limit land uses known to be detrimental to biodiversity.