luxAB基因标记的K2116L菌株在棉花根际中的定殖

采用三亲本杂交法将发光酶luxAB基因转移进棉花根际促生菌芽胞杆菌K2116菌株中,获得标记菌株K2116L.标记菌株连续传代15次均未发生质粒丢失现象,表明标记菌株具有较好的遗传稳定性;K2116L菌株的生长及其释钾能力未受到标记质粒的影响.K2116L菌株在灭菌和非灭菌的黄褐土、黄潮土和红壤3种土壤中均能长期存活;在灭菌土壤中的数量稍高于非灭菌土壤;在3种土壤中的数量依次为:黄褐土＞黄潮土＞红壤;在不同土壤中,K2116L菌株具有与土著菌株进行空间和营养竞争的能力.采用根盒试验追踪标记菌株在棉花根部的定殖动态,棉花播种12d时标记菌株在0～2、2～4 cm深度根际土壤定殖密度达到最大;18 d时在4 cm以下的深度达到最高水平.棉花播种18 d时标记菌株在所有深度的根表均达到最高定殖水平,0～2 cm根段定殖密度为1.76×106cfu·g-1,8cm以下根段达到1.6×105cfu·g-1.补充营养后,根际和根表标记的菌株数量均有明显上升.试验数据显示,随着根的生长标记菌株不断向根尖方向扩散.     

LuxAB标记的N2106-L在小麦根圈的定植动态

目的研究小麦PGPR（植物根际促生菌）菌株的个体生态学及其在小麦根圈的定植动态。方法采用三亲本杂交法将发光酶基因luxAB转人具有固氮能力的小麦根际促生菌Azotobacter N2106菌株中,获得标记菌株N2106-L,将标记菌株接种到灭菌和非灭菌的黄褐土、红壤和黄潮土中研究其存活状况,采用根盒试验追踪标记菌株在小麦根圈的定植动态。结果标记菌株N2106-L具有发光活性和对km、str、tet三种抗生素的抗性,且具有较好的遗传稳定性。N2106-L在灭菌土壤中的数量稍高于非灭菌土壤;在3种土壤中的数量依次为：黄褐土〉黄潮土〉红壤。N2106-L在小麦根表定植密度大于根际定植密度;在小麦根际,小麦播种10d时标记菌株在0-2cm深度根际土壤定植达到最大值（2．17±0．25）×10^6CFU／g土,20d时在2-4cm深度的根际土壤中达到最高定植水平（3．92±0．47）×10^5CFU／g土;在小麦根表,标记菌株在小麦播种10d时在所有深度的根段均达到最高定植水平,0-2cm根段定植密度为（3．60±0．60）×10^6CFU／g鲜根,12cm以下根段达到（2．78±0．56）×10^4CFU／g鲜根。结论标记菌株随着根的伸长不断向根尖方向扩散,且较为稳定地在小麦根圈定植,研究结果为小麦PGPR菌株的应用提供了可靠实验数据。     

应用发光酶基因对快生型大豆根瘤菌HN01结瘤作用进行检测

含发光酶基因luxAB的Tn5转座子自杀质粒pHNC3,在辅助质粒pRK2013的帮助下,转入快生型大豆根瘤菌HN01中小,pHNC3经自杀重组,其Tn5－luxAB转座插入HN01基因组中,从而赋予HN01以发光活性。挑取具有发光活性的HN01杂交单菌落,进行质粒快检和以luxAB为探针的分子杂交,选取Tn5-luxAB分别插入到HN01染色体上和不同质粒上的标记菌株,进行灭菌盆栽实验,并对一株Tn5-luxAB标记于染色体上的菌株HN01LC02进行了模拟大豆栽培条件下的有菌盆栽实验,包括对发光根瘤菌占瘤率的测定和发光根瘤在根系上分布情况的测定。     

巨大芽胞杆菌luxAB标记菌株的根际定殖研究

通过三亲本杂交方法成功地用发光酶基因luxAB标记巨大芽胞杆菌ATCC14581,所获得的标记菌株ATCC14581-L在不同的条件下能稳定发光.将该标记菌株制成微生物接种剂,并利用土壤微缩系统将其接种小麦进一步研究它在小麦根际的定殖动态和散布规律.结果发现,ATCC14581-L在灭菌土壤中的定殖水平高于不灭菌土壤,在垂直方向上主要的定殖在0～7cm根段间,且随深度增加而降低.ATCC14581-L在小麦种后第7d之前就已达到最高定殖水平,在初始接种量为3.40×107cfu/g根情况下,第7d时灭菌土壤处理的根际菌数为2.54×105cfu/g根,而不灭菌土壤的根际菌数为8.87×104cfu/g根;随着时间的增长,定殖数量明显降低.     

LuxAB标记荧光假单胞菌的菜心根际定殖研究

目的:利用三亲本杂交方法将luxAB发光酶基因标记至荧光假单胞菌PF20001上,所获得的标记菌株PF20001-Lux能稳定发光。将该标记菌株制成微生物制剂,接种菜心进一步研究它在菜心根际的定殖动态和散布规律。方法:利用三亲本杂交方法将luxAB发光酶基因标记至荧光假单胞菌PF20001上,将该菌施与菜心生长土壤中,通过接合子发光检测及发光菌落的平板计数来分析荧光假单胞菌在菜心根际的定殖分布情况。结果:PF20001-Lux在根系周围的土壤中的有一定的定殖率,在根内主要定殖在3～4cm根内。PF20001-Lux在菜心种植后7d前就达到最高定殖水平达3.8×105CFU/g,随后逐渐下降。结论:PF20001-lux在菜心根际具备良好的适应能力。     

海洋细菌L_1-9双抗菌株的定殖能力及其对黄瓜枯萎病的防治作用

采用抗生素标记法,对海洋多黏类芽孢杆菌L1-9菌株进行标记,抗性菌株L1-9Str,rif对链霉素和利福平的抗性浓度分别为160μg/m L和20μg/m L。双抗菌株L1-9Str,rif的抑菌特性及其对链霉素和利福平的抗性经多次传代仍比较稳定。盆栽试验表明,该双抗菌株能在黄瓜根部土壤及根组织、茎基部、子叶和真叶组织中定殖。菌株L1-9Str,rif在黄瓜外根际、根际和根表土壤及黄瓜组织中的定殖动态基本一致,初期黄瓜组织中L1-9Str,rif菌量较少,随着时间的延长,菌量逐渐增加,达到高峰后逐渐减少。菌株L1-9Str,rif在根表土壤中菌量最多(1.76×109 CFU/g),其次是根际土壤,外根际土壤中菌量较少;在黄瓜组织中,菌株L1-9Str,rif其在子叶中的定殖能力最强(5.63×104 CFU/g),其次是根和茎基部(0-2 cm);调查至第26 d时在根部土壤中的含菌量仍保持在稳定的水平,其中根表土壤中含菌量最高(2.41×107 CFU/g),在黄瓜组织样品中,子叶中的含菌量最高(4.15×104 CFU/g);温室防病实验结果表明,菌株L1-9和L1-9Str,rif菌株对黄瓜枯萎病具有良好的防治效果,不同时期防效均达70%以上。上述结果表明来自海洋的多黏类芽孢杆菌L1-9菌株能在黄瓜根部土壤及幼苗组织中定殖,是一株有潜力的黄瓜枯萎病生防菌株。     

运用生色基因标记黄瓜根围促生菌(PGPR)筛选菌株

采用三亲交配方法 ,通过Tn7转座系统将lacZY标记基因导入黄瓜根围促生菌 (PG PR)筛选菌株PseudomonasfluorescensCN1 1 6和PseudomonascorrugataCN31的利福平抗性突变株中 ;标记假单胞菌菌株则被赋予了利用乳糖作为唯一碳源的能力 ,在只有乳糖的M9培养基上生长能分解X Gal,菌落显出特有的蓝色 ;经Southern杂交分析 ,证明标记基因lacZY存在于转化菌株的染色体上 ;经验证标记菌株标记性状稳定 ,与对应的野生菌株比较其它性状如培养性状、形态特征、生防效果等基本不变 ;PGPR菌株利福平抗性和生色基因标记的结合 (双标记 )能最大限度地将土壤中引入的PGPR菌株与土著细菌分开 ,检测下限可达 1 0CFU mL ,为PGPR在根围的分子生态学研究提供了一个较好的工具。     

棉花根际亲和性高效促生细菌的分离筛选

为了从棉花根际土壤筛选能与棉花凝集素具有亲和作用的高效促生细菌,以选择性培养基从棉花根部初步筛选具有固氮能力、解磷能力及解钾能力的促生细菌,再以异硫氰酸磺(FITC)标记的棉花凝集素为复筛工具,从棉花根际促生细菌中筛选能与棉花凝集素结合的亲和性菌株,分别挑选2株固氮菌、2株解磷细菌和2株解钾细菌作为微生物肥料接种到棉花根部进行盆栽试验.观察其在根部定殖情况.结果是在选择性平板上有20%～30%的菌株具有凝集素染色阳性.盆栽试验显示,接种的6株亲和性菌株能在棉花根部成功定殖,根际细菌数量约是灭活对照的`0倍.通过初步鉴定,固氮菌株N1111为固氮菌属(Azotobacter),N2121属于德克斯氏菌属(Derxia);解磷菌株P2126属于黄单胞菌属(Xanthomonas),P1108菌株为假单胞菌属(Pseudomonas);解钾菌株K2204和K2116属于芽孢杆菌属(Bacillus).     

基模势对luxAB标记的快生型大豆根瘤菌在土壤中存活的影响

经接合转移将luxAB基因插入快生型大豆根瘤菌 (Rhizobiumfredii)染色体 ,取可高效结瘤固氮的R .frediilux3菌株用于分子生态学研究 .在不同基模势下 ,研究了lux3在土壤中的存活 ,基模势为 - 30和 - 750kPa时 ,lux3在灭菌土中的生存能力明显 (P<0 .0 5)高于未灭菌土 ,当基模势为 - 1 50 0kPa时 ,土壤是否灭菌对lux3的存活影响没有差异 .不同基模势对lux3活性影响显著 ,在 - 1 50 0kPa的未灭菌土中 ,随着饥饿时间延长 ,可恢复活性的细菌数量显著下降 .同时比较了测定微生物活性的 3种方法 (即生物发光、脱氢酶活性和微生物呼吸 ) ,发光值变化与活细胞密度变化一致 ,PLf值 (即潜在发光 ,Potentialluminescence)反映了可恢复活性的饥饿种群密度 .luxAB基因是一种比较简便而实用的标记     

两株PGPR菌株的花生定殖及对根际细菌群落结构的影响北大核心CSCD

为探讨2株根际促生菌耐酪氨酸束村氏菌P9和吡咯伯克霍尔德氏菌P10对花生的促生机制。利用GFP及利福平对2个菌株进行标记、结合扫描电镜观察,追踪了2株PGPR菌株在花生组织中的定殖动态;并通过16S rRNA全长测序对菌株接种花生根际土壤的细菌多样性进行分析。结果表明,利福平标记的P9和P10菌株具有良好的遗传稳定性,其生长和促生特性与原始菌株基本一致。GFP标记菌株可在花生的根尖及其分生区定殖;利福平标记菌株可稳定定殖在土壤及花生的根、茎部,且接菌30 d后定殖数仍保持在10CFU/g数量级。与未接菌植株根际土壤相比,P9、P10及混合菌株接种组的细菌群落相似性更高;接菌组的Flavihumibacter、unidentified_Rhizobiaceae的相对丰度显著增加,芽孢杆菌属、链霉菌属等的丰度较CK有不同程度增加,溶杆菌属、无色杆菌属及假黄单胞菌属等的丰度降低。2株PGPR菌株均可通过直接定殖在植株组织中、间接影响土壤细菌群落结构而发挥对花生的促生作用,混合菌株接种效果更优。研究结果明析了2株促生菌的促生机制,并为菌株的应用提供了科学依据。     

Improvement of the bioluminescence reporter system for real-time monitoring of circadian rhythms in the cyanobacterium Synechocystis sp. strain PCC 6803

Circadian rhythm is a self-sustaining oscillation whose period length coincides with the 24-hour day-night cycle. A powerful tool for circadian clock research is the real-time automated bioluminescence monitoring system in which a promoter region of a clock-controlled gene is fused to a luciferase reporter gene and rhythmic regulation of the promoter activity is monitored as bioluminescence. In the present study, we greatly improved the bioluminescence reporter system in the cyanobacterium Synechocystis sp. strain PCC 6803. We fused an 805-bp promoter region of the dnaK gene seamlessly to the luxA coding sequence and integrated the P(dnaK)::luxAB fusion gene into a specific intergenic region of the Synechocystis genome (targeting site 1). The resulting new reporter strain, PdnaK::luxAB(-), showed 12 times the bioluminescence intensity of the standard reporter strain, CFC2. Furthermore, we generated strain PdnaK::luxAB(+), in which the P(dnaK)::luxAB fusion gene and the selection-marker spectinomycin resistance gene are transcribed in opposite directions. The PdnaK::luxAB(+) strain showed 19 times the bioluminescence intensity of strain CFC2. The procedures used to increase the bioluminescence intensity are especially useful for bioluminescence monitoring of genes with low promoter activity. In addition, these reporter constructs facilitate bioluminescence monitoring of any gene because the promoter fragments they contain can easily be replaced by digestion with unique restriction enzymes. They would therefore contribute to a genome-wide analysis of gene expression in Synechocystis.     

Iron-regulated phenylalanyl-tRNA synthetase activity in Azotobacter vinelandii

Azotobacter vinelandii strain UA22 was produced by pTn5luxAB mutagenesis, such that the promoterless luxAB genes were transcribed in an iron-repressible manner. Tn5luxAB was localized to a fragment of chromosomal DNA encoding the thrS, infC, rpmI, rplT, pheS and pheT genes, with Tn5 inserted in the 3'-end of pheS. The isolation of this mutation in an essential gene was possible because of polyploidy in Azotobacter, such that strain UA22 carried both wild-type and mutant alleles of pheS. Phenylalanyl-tRNA synthetase activity and PHES::luxAB reporter activity was partially repressed under iron-sufficient conditions and fully derepressed under iron-limited conditions. The ferric uptake regulator (Fur) bound to a DNA sequence immediately upstream of luxAB, within the pheS gene, but PHES::luxAB reporter activity was not affected by phenylalanine availability. This suggests there is novel regulation of pheST in A. vinelandii by iron availability.     

cpmA, a Gene Involved in an Output Pathway of the Cyanobacterial Circadian System

We generated random mutations in Synechococcus sp. strain PCC 7942 to look for genes of output pathways in the cyanobacterial circadian system. A derivative of transposon Tn5 was introduced into the chromosomes of reporter strains in which cyanobacterial promoters drive the Vibrio harveyi luxAB genes and produce an oscillation of bioluminescence as a function of circadian gene expression. Among low-amplitude mutants, one mutant, tnp6, had an insertion in a 780-bp open reading frame. The tnp6 mutation produced an altered circadian phasing phenotype in the expression rhythms of psbAI::luxAB, psbAII::luxAB, and kaiA::luxAB but had no or little effect on those of psbAIII::luxAB, purF::luxAB, kaiB::luxAB, rpoD2::luxAB, ndhD::luxAB, and conII::luxAB. This suggests that the interrupted gene in tnp6, named cpmA (circadian phase modifier), is part of a circadian output pathway that regulates the expression rhythms of psbAI, psbAII, and kaiA.     

用发光酶基因(luxAB)标记法研究慢生花生根瘤菌的竞争结瘤能力

luxAB基因标记是一种新型基因标记技术,在很多研究领域都有着良好的应用前景。研究通过三亲本杂交将luxAB基因成功地向慢生型花生根瘤菌进行了转移,并获得了一株带LuxAB基因标记的菌株Cspr7-1。对Cspr7-1进行性状、标记基因的遗传稳定性检测,结果表明,LuxAB基因不仅能有效表达,而且性状稳定。在无氮水培条件下进行标记菌株与土著根瘤菌的竞争结瘤试验。结果证实,Cspr7-1在植物根系上的占瘤率平均达到61.3％,比土著根瘤菌的竞争结瘤能力强,而且Cspr7-1在主根上的侵染能力远较侧根上的强,平均高出22.3％-39.6％。     

Colonization and persistence of a plant growth-promoting bacterium Pseudomonas fluorescens strain CS85, on roots of cotton seedlings

Pseudomonas fluorescens CS85, which was previously isolated from the rhizosphere of cotton seedlings, acts as both a plant growth-promoting bacterium and a biocontrol agent against cotton pathogens, including Rhizoctonia solani, Colletotrichum gossypii, Fusarium oxysporum f sp. vasinfectum, and Verticillium dahliae. Strain CS85 was labeled separately with luxAB and gusA. The labeled strains were stably maintained and had high levels of expression of the marker genes, luxAB and gusA, after successive transfers on nonselective medium, long-term preservation, and after recovery from soil. The labeled strains displayed similar biocontrol characteristics (e.g., antibiosis, effects of growth-promotion and disease-control) to the original strain. The labeled strains colonized all surfaces of the young plant root zones, such as roots hairs and lateral roots, although the distribution of the labeled strains on the root surfaces was not uniform. Moreover, the population densities of the labeled strains on the root surface were stably maintained at high levels during the first 2 weeks of plant growth in the native soil, so that about 10(7)-10(8) CFU/g root were detected, then decreased gradually. Nevertheless, approximately 10(6) CFU/g root of the labeled strains were observed on the root surfaces 35 d after planting.     

Circadian expression of the dnaK gene in the cyanobacterium Synechocystis sp. strain PCC 6803.

The expression of the dnaK gene in the cyanobacterium Synechocystis sp. strain PCC 6803 was continuously monitored as bioluminescence by an automated monitoring system, using the bacterial luciferase genes (luxAB) of Vibrio harveyi as a reporter of promoter activity. A dnaK-reporting bioluminescent Synechocystis strain was constructed by fusing a promoterless segment of the luxAB gene set downstream of the promoter region of the Synechocystis dnaK gene and introduction of this gene fusion into a BglII site downstream of the ndhB gene in the Synechocystis chromosome. Bioluminescence from this strain was continuously monitored and oscillated with a period of about 22 h for at least 5 days in continuous light. The phase of the rhythm was reset by the timing of the 12-h dark period administered prior to the continuous light. The period of the rhythm was temperature compensated between 25 and 35 degrees C. Thus, the bioluminescence rhythm satisfied the three criteria of circadian rhythms. Furthermore, the abundance of dnaK mRNA also oscillated with a period of about 1 day for at least 2 days in continuous light conditions, indicating circadian control of dnaK gene expression in Synechocystis sp. strain PCC 6803.