三维反卷积显微成像技术浅谈

三维宽场反应卷积显微成像技术是应用光学切片方法获取三维标本的二维图像序列,然后通过反卷积图像处理方法进行图像恢复,进而进行三维重建的一种以光学技术和图像处理技术为核心的显微成像方法。本文讲述了光学切片的基本原理,给出了反卷积处理中点扩展函数的理论模型和实验测试方法,然后对现存的反卷积算法做了对比。最后,文章对这一领域的发展趋势作了预测。     

以三维荧光反卷积显微技术研究活体细胞中分泌囊泡的空间分布

获得活体细胞三维图像以观察细胞内分泌囊泡的空间分布有助于细胞分泌机制的研究。三维荧光反卷积显微技术可以为活体细胞观察提供低荧光漂白 ,低毒副作用的快速三维成像。研究了显微成像系统实验测定和理论计算点扩展函数之间的关系 ,并且实验验证了NA 1.6 5物镜条件下 ,理论计算点扩展函数可以较好地反映显微成像系统的特性。然后使用已知物理结构的三维样本对反卷积算法的有效性进行了研究。进而对使用吖啶橙(acridineorange)标记的大鼠胰腺 β细胞分泌囊泡进行观察。结果显示 ,反卷积算法可以有效地去除原始图像中因为焦外光影响产生的模糊 ,处理后图像清晰地显示了细胞内分泌囊泡的空间分布     

活体细胞三维图像科学可视化方法的研究

科学可视化是指运用计算机图形学和图像处理技术,将科学计算过程中或者是计算结果的数据转换为图形或图像,在屏幕上显示出来并进行交互式处理的理论技术或方法。介绍了用反卷积荧光显微成像技术获得活体大鼠胰腺B细胞三维图像及对其进行科学可视化的主要过程和两种常用可视化算法,并运用这两种方法对所得到的三维图像进行处理以分析和研究细胞内分泌囊泡的空间分布。结果显示,当仅观察细胞三维图像的二维切片时,三维图像中的某些重要信息会被忽略,而使用科学可视化方法则可以从三维角度直观观察活体细胞内分泌囊泡的空间分布,并且可以观察到分泌囊泡的释放趋势和整体分布,从而为细胞生物学研究提供重要的信息。     

基于频域反卷积滤波器的光声成像

采用探测器的脉冲响应在频域反卷积滤波光声信号以进一步提高光声成像的分辨率.由仿真和实验结果表明,频域反卷积滤波重建相对于时域反投影重建和滤波反投影重建具有更好的成像效果,明显地提高重建图像的分辨率,经仿真结果的计算,其重建图像的分辨率由2.58 mm提高到了0.16 mm.实验所用的光源为YAG激光器,波长为1064 ...     

小动物体内可见光三维成像技术研究进展

活体动物体内可见光成像是采用生物发光和荧光为标记物,利用灵敏的仪器来监控活体动物体内的细胞活动、蛋白表达情况和基因行为。近年来,可见光成像在生物医学的各个方面得到了广泛的应用。随着成像技术和检测仪器的不断发展,现已从平面二维成像逐渐发展为立体三维成像。三维成像技术在靶点的空间定位、与器官的关系,及绝对定量方面都有了很大的进展。本文就三维成像技术的原理、应用和发展前景进行了简要的综述。     

应用Image-pro显微成像技术抢救性拍照早年中枢神经切片

中枢神经解剖学是基础医学和临床医学各学科的重要基础,也是医学院校基础医学和临床医学各专业研究生和本科生的必修课程。在解剖学的学习上,中枢神经系统远比人体其他系统更为复杂和抽象。且迄今在国内外由于极度缺乏人体中枢神经系高清晰度切片图谱等形象教学资料,更为这门古老而经典的形态学科的学习增加了难度。     

超分辨显微成像技术在活细胞成像中的应用与发展

超分辨显微成像技术(super-resolution microscopy,SRM)可以绕过光学衍射极限对成像分辨率的限制,让以前观察不到的纳米级结构实现可视化,这一重大研究进展推动了现代生命科学和生物医学研究的进步与发展.细胞是生物体的基本组成单位,对活细胞内部的细微结构和动力学过程进行研究是掌握生命本质必不可少的途...     

多光子显微成像技术在脑部疾病研究中的应用

由于多光子显微技术具有高时空分辨率、低损伤性、可对活体长时间成像等特点,近年来已被广泛应用于生物医学等领域,并且在多种疾病诊断中展现出巨大的应用潜力.尤其是在脑部疾病的研究中,利用多光子成像技术可实现对复杂神经网络的研究,包括对脑部神经细胞、血管、肿瘤等进行实时成像并研究各自之间的相互作用,能进一步揭示脑疾病的发病机制并指导检测治疗方法的开发.本文简要介绍了多光子成像技术的基本原理及特点,总结了其在阿尔茨海默病、脑中风、脑肿瘤等多种脑部疾病中的应用,详细阐述了近年来利用多光子成像技术在脑部疾病研究中所获得的成果,并对多光子成像技术的发展前景进行了展望,预期其在脑部疾病的研究中将发挥更大的作用.     

三维X射线显微技术与小型-微体化石高分辨率无损成像*

在古生物学研究中,以X射线断层成像(Computed Tomography)为代表的三维无损成像技术可以在不破坏化石标本的前提下,同时获得标本外观形态和内部结构的信息,相比传统的可见光成像手段有着明显优势。为推动化石三维无损成像技术在国内古生物学领域的发展,本文系统介绍一种新型显微CT技术——三维X射线显微术(Three-Dimensional X-ray Microscopy)。与基于几何放大和吸收衬度成像的传统显微CT技术相比,该技术有若干优势:(1)将同步辐射X射线显微断层成像的光学成像系统引入基于实验室X射线源的显微CT系统中,在几何放大的基础上增加了光学放大,优化了传统显微CT的系统架构,弥补了传统显微CT单纯依靠几何放大的不足,提高了空间分辨率;(2)采用可移动的X射线源和优化的光学成像系统,实现了低能X射线相位衬度成像,可以三维重构传统显微CT技术无法有效探测的、低吸收衬度的化石标本;(3)基于新的成像架构和成像算法,实现了厘米-分米级较大标本内部"感兴趣区域"(Region of Interest)精确导航和局部高分辨率(微米-亚微米空间分辨)成像;(4)可以实现小型扁平标本(宽厚比4,宽10cm)高效率、高分辨率成像和长条形微体标本长轴方向自动分段无缝拼接的微米至亚微米级高分辨率重建,弥补了传统工业显微CT针对小型扁平标本和长条形微体标本高分辨成像效果不佳的缺陷。这些优势使得基于实验室X射线源的显微CT成像技术可以获得接近同步辐射X射线源的成像质量,从而有效推动化石生物学研究。     

三套荧光显微成像系统在光敏剂亚细胞定位研究中的应用比较

目的：对三套荧光显微成像系统在国产新型光敏剂HMME亚细胞定位研究中的应用特点及适用范围进行了比较与评价。方法：分别应用LSCM、CCD、ICCD荧光显微成像系统,选择特异性细胞器荧光探针Rhodamine-123、DIOC6(3)标记细胞内线粒体和内质网。采用细胞器-细胞荧光强度比值法,对HMME进行单细胞内分布的定性与定量研究。结果：LSCM和CCD成像系统能采集到浓度达到160μg／ml时的HMME的荧光图像,获得荧光探针图像信息显示所标记的细胞内线粒体和内质网平均荧光强度比值(J1/J2值)都明显高于细胞内J1/J2值。而ICCD成像系统只需HMME浓度为5μg/ml,荧光图像特点都呈胞浆中荧光强度较高且分布不均,细胞核区荧光较弱的中空现象。ICCD系统对细胞器探针荧光图像在空间分辨上不理想。结论：LSCM与CCD成像系统限于其探测灵敏度,对于弱荧光性光敏剂,适用于其高孵育浓度条件下的亚细胞定位研究。二者获得的结果相一致：孵育24h,HMME在鼠肺内皮细胞线粒体和内质网有分布而几乎不进入细胞核。ICCD成像系统可不受孵育浓度条件的限制,实现光敏剂极微弱荧光的有效探测,但空间分辨率较低。     

Confocal scanning optical microscopy and three-dimensional imaging

Summary— Confocal scanning optical microscopy has significant advantages over conventional fluorescence microscopy: it rejects the out-of-locus light and provides a greater resolution than the wide-field microscope. In laser scanning optical microscopy, the specimen is scanned by a diffraction-limited spot of laser light and the fluorescence emission (or the reflected light) is focused onto a photodetector. The imaged point is then digitized, stored into the memory of a computer and displayed at the appropriate spatial position on a graphic device as a part of a two-dimensional image. Thus, confocal scanning optical microscopy allows accurate non-invasive optical sectioning and further three-dimensional reconstruction of biological specimens. Here we review the recent technological aspects of the principles and uses of the confocal microscope, and we introduce the different methods of three-dimensional imaging.     

Live cell imaging using wide-field microscopy and deconvolution

The use of fluorescence imaging methods, most recently based on fluorescent protein technology, and the availability of high quality fluorescence imaging systems have driven a revolution in cell and molecular biology. Live cell imaging, especially using fluorescence, is now used in a wide variety of assays in academic and commercial laboratories. The use of this technology requires particular attention to be paid to cell engineering, the design of the image acquisition system, the imaging protocol, and subsequent processing and analytic methods. In this review, we discuss each of these steps, highlighting practical techniques developed by us and others.     

Three-dimensional imaging by deconvolution microscopy

Deconvolution is a computational method used to reduce out-of-focus fluorescence in three-dimensional (3D) microscope images. It can be applied in principle to any type of microscope image but has most often been used to improve images from conventional fluorescence microscopes. Compared to other forms of 3D light microscopy, like confocal microscopy, the advantage of deconvolution microscopy is that it can be accomplished at very low light levels, thus enabling multiple focal-plane imaging of light-sensitive living specimens over long time periods. Here we discuss the principles of deconvolution microscopy, describe different computational approaches for deconvolution, and discuss interpretation of deconvolved images with a particular emphasis on what artifacts may arise.     

Quadrature demodulation in line‐scan focal modulation microscopy for imaging three‐dimensional zebrafish neural structure

Visualizing biological processes in neuroscience requires in vivo functional imaging at single‐neuron resolution, high image acquisition speed and strong optical sectioning ability. However, due to light scattering of in tissue, very often conventional wide‐field fluorescence microscopes are unable to resolve cells in the presence of a strong out‐of‐focus background. Line‐scan focal modulation microscopy enables high temporal resolution and good optical sectioning ability at the same time. Here we demonstrate a quadrature demodulation method to extract the focal information with an extended frequency bandwidth and therefore higher spatial resolution. The performance of the demodulation scheme in line‐scan focal modulation microscope has been evaluated by performing imaging experiments with fluorescence beads and zebrafish neural structure. Reduced background, reduced artifacts and more detailed morphological information are evident in the obtained images.      

Raising the speed limits for 4D fluorescence microscopy

Three-dimensional time-lapse (4D) fluorescence microscopy is becoming a routine experimental tool. This article summarizes current technologies, and describes a new method for speeding image acquisition during 4D confocal microscopy.     

Enhanced temporal and spatial resolution in super-resolution covariance imaging algorithm with deconvolution optimization

Based on the numerical analysis that covariance exhibits superior statistical precision than cumulant and variance, a new SOFI algorithm by calculating the n orders covariance for each pixel is presented with an almost -fold resolution improvement, which can be enhanced to 2ⁿ via deconvolution. An optimized deconvolution is also proposed by calculating the (n + 1) order SD associated with each n order covariance pixel, and introducing the results into the deconvolution as a damping factor to suppress noise generation. Moreover, a re-deconvolution of the covariance image with the covariance-equivalent point spread function is used to further increase the final resolution by above 2-fold. Simulated and experimental results show that this algorithm can significantly increase the temporal–spatial resolution of SOFI, meanwhile, preserve the sample's structure. Thus, a resolution of 58 nm is achieved for 20 experimental images, and the corresponding acquisition time is 0.8 seconds.     

Analysis of three-dimensional cell imaging obtained with optical microscopy techniques based on defocusing

The properties of an optical microscope are analyzed and analytically evaluated with a simple and effective model in order to understand the true meaning, limitations, and real capabilities of a defocusing technique. Major emphasis is given to the applications related to microscopic objects of biological interest using fluorescence and absorption light microscopy. A procedure for three-dimensional viewing is analyzed and discussed.     

Integrating photoacoustic microscopy with other imaging technologies for multimodal imaging

As a hybrid optical microscopic imaging technology, photoacoustic microscopy images the optical absorption contrasts and takes advantage of low acoustic scattering of biological tissues to achieve high-resolution anatomical and functional imaging. When combined with other imaging modalities, photoacoustic microscopy-based multimodal technologies can provide complementary contrast mechanisms to reveal complementary information of biological tissues. To achieve intrinsically and precisely registered images in a multimodal photoacoustic microscopy imaging system, either the ultrasonic transducer or the light source can be shared among the different imaging modalities. These technologies are the major focus of this minireview. It also covered the progress of the recently developed penta-modal photoacoustic microscopy imaging system featuring a novel dynamic focusing technique enabled by OCT contour scan.