Disappearance of gas vacuoles in the blue-green alga Microcystis aeruginosa

Abstract In a culture of Microcystis aeruginosa, which had been transferred from a mineral medium into distilled water, the number of gas vacuoles per cell decreased and reached a value of 20% of the control 24 h after transfer. In senescent cells grown on a mineral agar for several weeks, the gas vacuoles also disappeared. The disappearance of the gas vacuoles may be a response to a nutrient deficiency in both cultures.     

Genome mapping in halobacteria

The goal of our research is to produce an ordered set of cosmid clones for each of several species of halobacteria for use in physical and genetic mapping. These maps will answer questions about genome evolution and about gene organization and regulation in this archaebacterial lineage. Progress in cloning and mapping the genome of Halobacterium volcanii DS2 (synonym Haloferax volcanii DS2) is reported. Overlapping cosmids are recognized by a strategy which makes use of the distinctive restriction fragments around relatively rare restriction sites. Each site recognized by the infrequently cutting restriction enzymes is a landmark from which to identify different regions of the genome. The main advantage of this strategy is that only a small overlap (10-20%) between cosmid clones is required, resulting in a correspondingly small number of cosmid clones to be analyzed. The certainty of overlap is high, and computation is simple. The final 5-10% of each genome is cloned, linked, and identified by chromosome walking methods. Hybridization of cloned homologous or heterologous genes and of stable RNAs to the minimal cosmid set localizes these genes on the physical map. Additional genes have been and will be cloned by complementation of auxotrophic mutants, or as determinants of resistance to antibiotics.     

Ribosomal proteins in halobacteria

The amino acid sequences of 16 ribosomal proteins from archaebacterium Halobacterium marismortui have been determined by a direct protein chemical method. In addition, amino acid sequences of three proteins, S11, S18, and L25, have been established by DNA sequencing of their genes as well as by protein sequencing. Comparison of their sequences with those of ribosomal proteins from other organisms revealed that proteins S14, S16, S19, and L25 are related to both eukaryotic and eubacterial ribosomal proteins, being more homologous to eukaryotic than eubacterial counterparts, and proteins S12, S15, and L16 are related to only eukaryotic ribosomal proteins. Furthermore, some proteins are found to be similar to only eubacterial proteins, whereas other proteins show no homology to any other known ribosomal proteins. Comparisons of amino acid compositions between halophilic and nonhalophilic ribosomal proteins revealed that halophilic proteins gain aspartic and glutamic acid residues and significantly lose lysine and arginine residues. In addition, halophilic proteins seem to lose isoleucine as compared with Escherichia coli ribosomal proteins.     

The buoyancy-providing role of gas vacuoles in an aerobic bacterium

The heterotrophic, freshwater bacterium Prosthecomicrobium pneumaticum Staley possesses sufficient gas vacuoles to render it buoyant at all stages of growth. Although the cells have a turgor pressure of about 300 kPa, there is no evidence that this pressure is important in causing collapse of the constituent gas vesicles. A mutant of the bacterium, which produced only 0.2% of the amount of gas vacuoles produced by the wild type, was isolated. It always sank in liquid culture. Wild type and mutant bacteria grew at the same rate in shaken culture, but in static culture the wild type, which floated to the liquid surface grew more quickly than the mutant, which sank. Other competition experiments suggested that the advantage gained in floating at the surface was simply that oxygen was more readily available there to this obligate aerobe. Similar advantages may benefit gas vacuolate forms in natural habitats.A second mutant was isolated which produced about 40% fewer gas vacuoles than the wild type in corresponding stages of growth, insufficient to provide buoyancy, and unlikely to be of selective value. The occurrence of this mutant suggests there may be duplication of the gas vacuole gene.Abbreviations T turbidity - PST pressure sensitive turbidity - kPa kilo-Pascals (100 kPa=1 bar)     

Occurrence of megaplasmids in halobacteria

Sixty-five halobacteria, including culture collection and freshly isolated strains from widely differing geographical areas, were examined for the presence of high molecular weight plasmids by agarose gel electrophoresis. Seventy-five per cent of all the strains were shown to harbour at least one plasmid. In the majority of strains three or four megaplasmids were detected. Approximate molecular weights of the plasmids were in the range < 100 to 300 megadaltons (Mdal). In most culture collection strains, two or three plasmids were demonstrated, except in two in which no plasmid was detected, and in two Haloarcula strains which were found to contain five and eight plasmids; four and six of the latter were more than 100 Mdal. No relationship between the plasmid profile of each strain and its taxonomic assignation nor its isolation source was found. Evidence is presented for the first time on the occurrence of megaplasmids in halobacteria.     

Stringency and relaxation among the halobacteria.

Accumulation of stable RNA and production of guanosine polyphosphates (ppGpp and pppGpp) were studied during amino acid starvation in four species of halobacteria. In two of the four species, stable RNA was under stringent control, whereas one of the remaining two species was relaxed and the other gave an intermediate phenotype. The stringent reaction was reversed by anisomycin, an effect analogous to the chloroamphenicol-induced reversal of stringency in the eubacteria. During the stringent response, neither ppGpp nor pppGpp accumulation took place during starvation. In both growing and starved cells a very low basal level of the two polyphosphates appeared to be present. In the stringent species the intracellular concentration of GTP did not diminish but actually increased during the course of the stringent response. These data demonstrate that (i) wild-type halobacteria can have either the stringent or the relaxed phenotype (all wild-type eubacteria tested have been shown to be stringent); (ii) stringency in the halobacteria is dependent on the deaminoacylation of tRNA, as in the eubacteria; and (iii) in the halobacteria, ppGpp is not an effector of stringent control over stable-RNA synthesis.     

The properties and buoyancy-providing role of gas vacuoles in Trichodesmium Ehrenberg

All three species of the marine blue-green alga Trichodesmium collected in the Sargasso and Caribbean seas were found to possess gas vacuoles. The constituent gas vesicles were much stronger than those found in any freshwater blue-green alga, the mean critical collapse pressures being 12 bars in T. erythraeum, 34 bars in T. contortum and 37 bars in T. thiebautii. This great strength is obviously an adaptation to the hydrostatic pressures at the depths to which these organisms occur in the ocean. In each case the gas vesicles are far too strong to be collapsed by rising cell turgor pressure, though gas-vacuolation could be slowly regulated by the differential growth of gas vesicles and cells. Since the vesicles are of a similar shape and size to those in other species, the vesicle wall material must be stronger. The majority of Trichodesmium colonies collected were positively buoyant, and in all cases tested the buoyancy was dependent on the presence of gas vacuoles. The buoyancy is important in increasing the residence time of these slowly growing algae in the euphotic zone and it is responsible for the surface water-blooms which they form.     

CO2 fixation in halobacteria

Seven strains of extremely halophilic bacteria (Halobacterium spp., Halococcus spp., and Haloarcula sp.) fixed CO₂ under light and dark conditions. Light enhanced CO₂ fixation in Halobacterium halobium but inhibited it in Halobacterium volcanii and Haloarcula strain GN-1. Propionate stimulated ¹⁴CO₂ incorporation in some strains, but inhibited it in others. Semi-starvation in basal salts plus glycerol induced enhanced CO₂ fixation rates. ¹⁴CO₂ fixation in semi-starved cells was stimulated by NH ₄ ⁺ or pyruvate and inhibited by succinate and acetate in most strains. No possible reductant was found. In cell-free extracts of H. halobium, NH ₄ ⁺ but not propionate stimulated ¹⁴CO₂ fixation. No RuBP carboxylase activity was detected. The main ¹⁴C-labeled -keto acid detected after a 2-min incubation with ¹⁴CO₂ and pyruvate was pyruvate. Little or no -ketobutyrate was detected among the early products of propionate-stimulated CO₂ fixation. Glycine was the major amino acid synthesized during a 2-min incubation with NH ₄ ⁺ , propionate, and ¹⁴CO₂. Propionate-stimulated CO₂ fixation was sensitive to trimethoprim and insensitive to avidin. A novel pathway for non-reductive CO₂ fixation involving a glycine synthase reaction with CO₂, NH ₄ ⁺ , and a methyl carbon derived from the -carbon cleavage of propionate is tentatively proposed.Abbreviations used BBS buffered basal salts - HEPES N-2-hydroxyethylpiperazine-N-2-ethanesulfonic acid - MOPS 3-(N-morpholino)propanesulfonic acid - DNPH 2,4-dinitrophenylhydrazine - DNP dinitrophenyl - TLC thin-layer chromatography - FH₄ tetrahydrofolate This work was supported by National Science Foundation grant PCM-8116330 and Petroleum Research Fund grant PRF 13704-AC2     

The sensitivity of halobacteria to antibiotics

Abstract Eleven species of the genera Halobacterium, Halococcus and the recently proposed Haloarcula were tested by the macro-broth dilution method for their sensitivity to 20 antibiotics with different modes of action. The most active were bacitracin, erythromycin, haloquinone, rifampicin and novobiocin. Resistant mutants of H. mediterranei to bacitracin, chloramphenicol and josamycin were obtained with frequencies of spontaneous mutation between 10⁻⁴ and 10⁻⁷.     

Characterization of plasmids in halobacteria.

Extrachromosomal, covalently closed circular deoxyribonucleic acid has been isolated from different species of halobacteria. Three strains of Halobacterium halobium and one of Halobacterium cutirubrum, all of which synthesize purple membrane (Pum+) and bacterioruberin (Rub+), contain plasmids of different size which share extensive sequence homologies. One strain of Halobacterium salinarium, another one of Halobacterium capanicum, and two new Halobacterium isolates from Tunisia, which are also Pum+ Rub+, do not harbor covalently closed circular deoxyribonucleic acid but contain sequences, presumably integrated into the chromosome, which are similar if not identical to those of pHH1, i.e., the plasmid originally isolated from H. halobium. Three other halophilic strains, Halobacterium trapanicum, Halobacterium volcanii, and a new isolate from Israel, do not carry pHH1-like sequences. These strains are, by morphological and physiological criteria, different from the others examined and harbor plasmids unrelated to pHH1.     

On the role of tannin vacuoles in several nastic leaf responses

Summary Experiments were done to relate the presence of tannin vacuoles to plant movements. When surveyed, 4 out of 10 species exhibited rapid thigmonastic or nyctinastic movements, and only those 4 species had tannin vacuoles in their motor cells. Interestingly, plants ofAlbizzia julibrissin whose seed was obtained in New Haven, Connecticut had rapid nyctinasty and tannin vacuoles in the tertiary pulvini, whereasAlbizzia collected in Winston-Salem, North Carolina had neither. Nyctinasty ofMimosa pudica andAlbizzia NH, both of which had tannin vacuoles, was at the rate of 4.2 °/min, whereasAlbizzia WS andSamanea saman, neither of which had tannin vacuoles, exhibited leaflet closure at the rate of 2.0–2. 1 °/min. Pretreatment with the Ca²⁺ channel agonist Bay K-8644 increased, and with the antagonist verapamil decreased, the rate of leaflet closure only inMimosa andAlbizzia NH. Pretreatment with the Ca²⁺ inhibitor Erythrosin B substantially blocked reopening only inMimosa andAlbizzia NH. We conclude that tannin vacuoles assist nastic movements to be rapid by acting as a store of Ca²⁺ and releasing it as a second messenger upon mechanical perturbation or darkness.Abbreviations FR far-red irradiation - MP mechanical perturbation - TV tannin vacuoles     

The ecology and taxonomy of halobacteria

Abstract Archaebacterial halophiles dominate naturally occurring brines as the concentration of salts approaches saturation. Although only 4 genera of these bacteria have been recognised ( Halobacterium, Halococcus, Natronobacterium, Natronococcus ), chemotaxonomic studies indicate that there are 4 or 5 additional distinct groups. Archaebacterial halophiles are extremely physiologically versatile, some examples being capable of an anaerobic fermentative mode of growth, others of growth linked to the reduction of sulphur compounds. Many strains contain retinal-based pigments producing light-mediated movements of ions across the cell membrane, that in some cases can be harnessed for energy generation. However, it is likely that under normal conditions, an aerobic, chemoorganotrophic mode of nutrition is adopted.     

An investigation into the possible light-shielding role of gas vacuoles in a planktonic blue-green alga

When the gas vacuoles of Anabaena flos-aquae Bréb. ex Born. et Flah. are collapsed, the optical properties of the alga change. While this may suggest a light-shielding role, photosynthetic measurements indicate that intact gas vacuoles reduce the light falling on the thylakoids by only 4%, or less. Intact gas vacuoles offer no protection against the lethal effects of ultraviolet light. When the alga is grown at high light intensity the gas vacuoles are fewer in number but are oriented peripherally in the cells. However, this does not markedly affect their light shielding efficiency. Spectrophotometric measurements carried out by others indicate a light shielding role by gas vacuoles in a non-planktonic blue-green alga, Nostoc muscorum Kütz., but do not give a quantitative estimate of this effect. In Anabaena no definite evidence of light-shielding is obtained by such a method. All of the experiments described were conducted with dilute algal suspensions to investigate shielding effects in individual cells. Possible self-shading effects in dense suspensions and surface water blooms require further investigation.     

Some effects of light on the viability of rhodopsin-containing halobacteria

Under starvation conditions, rhodopsin-containing halobacteria show a light-accelerated death under aerobic conditions. This is attributed to photooxidative processes. Under anaerobic conditions, halobacteria die rapidly in the dark, and light prevents death. Since it has been shown by others that lightdriven ATP synthesis can occur under anaerobic conditions, it is postulated that rhodopsin-mediated photophorylation is of survival value for this organism in the brines in which it lives, especially because the solubility of oxygen is low in highly saline waters and anaerobic conditions can often develop.     

Structure of the intracellular part of the motility apparatus of halobacteria

he electron microscopic study of the structure of the motility apparatus of the archaea Halobacterium salinarium 4W12 and Natronobacterium magadii confirmed our earlier observation that the motility apparatus of halobacteria contains an intracellular disk-shaped lamellar structure (DLS). Polar cap structures (PCSs) isolated from the halobacterium were preliminarily identified as the DLSs. The PCSs in complexes with flagella were also isolated from the haloalkaliphilic bacterium N. magadii. The specific structure of the archaeal motility apparatus is discussed.