The challenge of novel abiotic conditions for species undergoing climate-induced range shifts

Coincident with recent global warming, species have shifted their geographic distributions to cooler environments, generally by moving along thermal axes to higher latitudes, higher elevations or deeper waters. While these shifts allow organisms to track their thermal niche, these three thermal axes also covary with non-climatic abiotic factors that could pose challenges to range-shifting plants and animals. Such novel abiotic conditions also present an unappreciated pitfall for researchers – from both empirical and predictive viewpoints – who study the redistribution of species under global climate change. Climate, particularly temperature, is often assumed to be the primary abiotic factor in limiting species distributions, and decades of thermal biology research have made the correlative and mechanistic understanding of temperature the most accessible and commonly used response to any abiotic factor. Receiving far less attention, however, is that global gradients in oxygen, light, pressure, pH and water availability also covary with latitude, elevation, and/or ocean depth, and species show strong physiological and behavioral adaptations to these abiotic variables within their historic ranges. Here, we discuss how non-climatic abiotic factors may disrupt climate-driven range shifts, as well as the variety of adaptations species use to overcome abiotic conditions, emphasizing which taxa may be most limited in this capacity. We highlight the need for scientists to extend their research to incorporate non-climatic, abiotic factors to create a more ecologically relevant understanding of how plants and animals interact with the environment, particularly in the face of global climate change. We demonstrate how additional abiotic gradients can be integrated into global climate change biology to better inform expectations and provide recommendations for addressing the challenge of predicting future species distributions in novel environments.     

Ecological and evolutionary consequences of niche construction for its agent

Niche construction can generate ecological and evolutionary feedbacks that have been underinvestigated so far. We present an eco-evolutionary model that incorporates the process of niche construction to reveal its effects on the ecology and evolution of the niche-constructing agent. We consider a simple plant-soil nutrient ecosystem in which plants have the ability to increase the input of inorganic nutrient as an example of positive niche construction. On an ecological time scale, the model shows that niche construction allows the persistence of plants under infertile soil conditions that would otherwise lead to their extinction. This expansion of plants' niche, however, requires a high enough rate of niche construction and a high enough initial plant biomass to fuel the positive ecological feedback between plants and their soil environment. On an evolutionary time scale, we consider that the rates of niche construction and nutrient uptake coevolve in plants while a trade-off constrains their values. Different evolutionary outcomes are possible depending on the shape of the trade-off. We show that niche construction results in an evolutionary feedback between plants and their soil environment such that plants partially regulate soil nutrient content. The direct benefit accruing to plants, however, plays a crucial role in the evolutionary advantage of niche construction.     

植物的亲缘选择

亲缘选择是指在一个随机交配群体中的个体基于亲缘关系而以一种非随机性的方式相互作用,其作用结果是亲缘个体得到更大的广义适合度。综述了亲缘选择和亲缘竞争两种观点以及各自的试验支持证据;分析了导致亲缘选择试验结果出现分歧的原因,认为这主要是由于对亲缘选择理解上的模糊以及试验设计的不严谨所致。植物间的亲缘选择研究不仅相对较少,对亲缘选择的机制研究更为欠缺,这就造成了目前对此问题在科学认识上出现不少盲点。综合前期研究,提出今后对亲缘选择的研究应该首先界定"亲缘"程度,同时改良试验设计方案,选择多种不同生境下的物种对亲缘选择进行深入研究,并且考虑环境因子对植物亲缘选择的影响。同时,对植物亲缘识别机制的研究应该从生理生化方面出发,通过定性定量地分析探索植物根系分泌物在植物亲缘识别中的作用和作用途径。     

Are seed germination and ecological breadth associated? Testing the regeneration niche hypothesis with bromeliads in a heterogeneous neotropical montane vegetation

The role of seed germination in contributing to species ecological breadth and geographic distribution is still a matter of debate. Here, we attempted to relate seed germination requirements with ecological breadth in 12 bromeliad species from heterogeneous montane vegetation in southeastern Brazil. Seeds were set to germinate under both light and dark conditions at a broad range of temperatures to determine the breadth of the germination niche. We ran a RLQ analysis based on the matrices of species occurrence, environmental parameters and germination traits and found a significant association between germination traits, and the characteristics of sites where adult plants occur. The variation of germination responses to environmental factors was not random with habitat-generalist plants having broader germination niches and habitat-specialist plants having narrower germination niches. The RLQ analysis showed that substrate moisture and light environment were the most important factors correlated with germination traits. Phylogenetic niche conservatism appears to play a role in the patterns found here, especially in the Tillandsioideae. There is an association between the regeneration niche of a species and its ecological range, and this also provides support for the idea that the regeneration niche may help assemble plant species into heterogeneous, species-rich communities.     

Feedback loops between 3D vegetation structure and ecological functions of animals

Ecosystems function in a series of feedback loops that can change or maintain vegetation structure. Vegetation structure influences the ecological niche space available to animals, shaping many aspects of behaviour and reproduction. In turn, animals perform ecological functions that shape vegetation structure. However, most studies concerning three-dimensional vegetation structure and animal ecology consider only a single direction of this relationship. Here, we review these separate lines of research and integrate them into a unified concept that describes a feedback mechanism. We also show how remote sensing and animal tracking technologies are now available at the global scale to describe feedback loops and their consequences for ecosystem functioning. An improved understanding of how animals interact with vegetation structure in feedback loops is needed to conserve ecosystems that face major disruptions in response to climate and land-use change.     

Niche width and niche overlap: a method based on type-2 fuzzy sets

Complicated ecosystems and the high non-linearity of evolution has made biology more adaptable to a variety of environments. The relationship between life and environment demands a dynamic definition of niche and its measurement. In this paper we propose a model of niche with dynamic character based on the “broad band” effect in type-2 fuzzy sets. The niche in this definition is an interval in each ecological dimension which is dynamic in character and depends on the actual environment. We also give formulas for niche width and niche overlap. We compute the niche width and overlap for plants and animals and then compare these results with previous results. The results for niche width in this paper reflect the diversity of resources used by species or communities. The results for niche overlap demonstrate overlap under different environmental conditions. The results are, moreover, intervals, which could provide more information. The model in this paper could therefore be used to describe the state of every resource comprehensively, reflecting the interaction between species and environment.     

Evolution under changing climates: climatic niche stasis despite rapid evolution in a non-native plant

A topic of great current interest is the capacity of populations to adapt genetically to rapidly changing climates, for example by evolving the timing of life-history events, but this is challenging to address experimentally. I use a plant invasion as a model system to tackle this question by combining molecular markers, a common garden experiment and climatic niche modelling. This approach reveals that non-native Lactuca serriola originates primarily from Europe, a climatic subset of its native range, with low rates of admixture from Asia. It has rapidly refilled its climatic niche in the new range, associated with the evolution of flowering phenology to produce clines along climate gradients that mirror those across the native range. Consequently, some non-native plants have evolved development times and grow under climates more extreme than those found in Europe, but not among populations from the native range as a whole. This suggests that many plant populations can adapt rapidly to changed climatic conditions that are already within the climatic niche space occupied by the species elsewhere in its range, but that evolution to conditions outside of this range is more difficult. These findings can also help to explain the prevalence of niche conservatism among non-native species.     

Niche versus neutrality in structuring the beta diversity of damselfly assemblages

1. Differences among communities in taxonomic composition – beta diversity – are frequently expected to result from taxon‐specific responses to spatial variation in ecological conditions, through niche partitioning. Such process‐derived patterns are in sharp contrast to arguments from neutral theory, where taxa are ecologically equivalent and beta diversity results primarily from dispersal limitation. 2. Here, we compared beta diversity among assemblages of damselflies (Odonata: Zygoptera), for which previous experiments have shown that niche differences maintain genera within a community, but patterns of relative abundance for species within each genus are shaped primarily by neutral dynamics. 3. Using null‐model and ordination‐based methods, we find that both genera and (in contrast to neutral theory) species assemblage composition vary across the landscape in a deterministic fashion, shaped by environmental and spatial factors. 4. While the observed patterns in species composition conflict with theory, we suggest that this a result of weak ecological filters acting to produce spatial variation in assemblages of ecologically similar species undergoing ecological drift within communities. Such patterns are especially likely in systems of relatively weak dispersers like damselflies.     

Scaling between macro- to microscale climatic data reveals strong phylogenetic inertia in niche evolution in plethodontid salamanders

Macroclimatic niches are indirect and potentially inadequate predictors of the realized environmental conditions that many species experience. Consequently, analyses of niche evolution based on macroclimatic data alone may incompletely represent the evolutionary dynamics of species niches. Yet, understanding how an organisms’ climatic (Grinnellian) niche responds to changing macroclimatic conditions is of vital importance for predicting their potential response to global change. In this study, we integrate microclimatic and macroclimatic data across 26 species of plethodontid salamanders to portray the relationship between microclimatic niche evolution in response to changing macroclimate. We demonstrate stronger phylogenetic signal in microclimatic niche variables than at the macroclimatic scale. Even so, we find that the microclimatic niche tracks climatic changes at the macroscale, but with a phylogenetic lag at million-year timescales. We hypothesize that behavioral tracking of the microclimatic niche over space and phenology generates the lag: salamanders preferentially select microclimates similar to their ancestral conditions rather than adapting with changes in physiology. We demonstrate that macroclimatic variables are weak predictors of niche evolution and that incorporating spatial scale into analyses of niche evolution is critical for predicting responses to climate change.     

Environmental filtering increases in intensity at both ends of climatic gradients,though driven by different factors,across woody vegetation types of the southwest USA

Species distributions are theorized to be more intensively constrained by abiotic factors in severe than in benign environments. A similar concept can be applied to assemblages of species: environmental filtering is expected to increase in intensity in colder and drier environments. To assess the filtering effects of climate on vegetation at a regional scale, climate niche values were estimated for 338 woody species across 93 vegetation types from arid sub‐tropical to alpine ecosystems of the southwest USA. The standardized range and spacing of climatic niche values in each vegetation type – used as estimates of the intensity of climatic and micro‐environmental filtering, respectively – were correlated with the mean niche values of those vegetation types – used as surrogates for climatic gradients – in order to assess how filtering of vegetation composition varies along broad climatic gradients. The range of climatic niche values was narrower than expected in most vegetation types, indicating significant climatic filtering, with frost having the strongest average effect. Niche spacing differed little from null expectations. Variation in the intensity of climatic filtering along gradients of the same climate variable was primarily asymmetrical, and provided support for the hypothesis that abiotic filtering is most intense in cold and growing season dry environments. However, filtering patterns of at least one climatic factor along gradients of other climatic factors ran counter to the trend of increasing filter intensity in cold or dry environments. In other words, climatic factors exhibited interactive effects on vegetation filtering, often in antagonistic ways. The majority of these interactions were compatible with interspecific niche relationships that correspond with anatomical and physiological tradeoffs among drought, frost and heat tolerances. Filtering patterns and interspecific tradeoffs are likely to vary across taxa and biomes, and application of the methods presented here could help to explain such variation.     

Water availability,fundamental niches and realized niches: A case study from the Cape flora

The ability of plants to survive drought or waterlogging constitutes an important niche parameter, which might be particularly significant in explaining species coexistence in the species‐rich and seasonally dry Cape Floristic Region of South Africa. However, the degree of physiological adaptation and specialization to these eco‐hydrological parameters (the fundamental niche) cannot be readily inferred from correlative studies based on species distributions and spatial variation in environmental parameters (the realized niche). We used an ex situ greenhouse experiment to compare the fundamental hydrological niches (different mean annual precipitation, rainfall seasonality and soil drainage) of six eco‐hydrologically divergent African Restionaceae species. Juvenile plants were subjected to six different watering treatments, ranging from no watering to waterlogging, to determine drought and waterlogging susceptibility and optimal growth conditions. We used the rate of biomass accumulation and survival rate as response measures. We found that species from dry and mesic (but well‐drained) habitats had optimal or near‐optimal growth at benign conditions (under which most restio species grow well). All species performed worse when droughted and died when not watered. Species from dry habitats tended to perform better (assessed in growth) than species from wet habitats under droughting. Species from wet habitats performed best when waterlogged, whereas species from dry habitats performed very poorly when waterlogged – thus showing that realized and fundamental niches covaried at the wet end of the hydrological gradient. We conclude that eco‐hydrological parameters are part of the fundamental niche, and fundamental and realized species niches are approximately correlated along them. The distribution of wet habitat species appears not to reflect their drought tolerance, suggesting that it may not be predicted by bioclimatic variables, but rather by soil drainage characteristics.     

Species: a praxiographic study

Taxonomists, who describe new species, are acutely aware of how political, economic, and ecological forces bring new forms of life into being. Conducting ethnographic research among taxonomic specialists – experts who bring order to categories of animals, plants, fungi, and microbes – I found that they pay careful attention to the ebb and flow of agency in multispecies worlds. Emergent findings from genomics and information technologies are transforming existing categories and bringing new ones into being. This article argues that the concept of species remains a valuable sense‐making tool despite recent attacks from cultural critics.     

Lichen epiphyte diversity: A species,community and trait-based review

The forest canopy is fundamentally important in biodiversity conservation and ecosystem function. Cryptogamic epiphytes are dominant tree bole and canopy elements in temperate and boreal forests, though remain neglected by mainstream forest ecology. This review makes ecological information on cryptogamic epiphytes available to a non-specialist audience, to facilitate their integration in forest biodiversity and ecosystem studies more generally. The review focuses specifically on lichen epiphytes, highlighting their diversity and ecosystem role. A principal task is to explore pattern and process in lichen epiphyte diversity – species composition and richness – therefore demonstrating the utility of lichens as an ecological model system. The review examines key themes in previous research. First, the extensive literature used to resolve species response to, and community turnover along environmental/resource gradients, consistent with the habitat niche. Second, the evidence for dispersal-limitation, which may constrain community composition and richness in isolated habitats. Third, these two processes – the habitat niche and dispersal-limitation – are used to explain stand-scale diversity, in addition to the role of neutral effects (habitat area). Fourth, the review moves from a taxonomic (pattern) to a functional (process) perspective, considering evidence for autogenic succession evidenced by competition and/or facilitation, and non-random trends in life-history traits. This functional approach provides a counter-point to an assumption that lichen epiphyte communities are unsaturated and non-competitive, a situation which would allow the long-term accumulation of species richness with temporal continuity. Finally, the review explores landscape-scale impacts on lichen epiphytes, with recommendations for conservation.     

Assessing the nutritional consequences of switching foraging behavior in wood bison

Diet is one of the most common traits used to organize species of animals into niches. For ruminant herbivores, the breadth and uniqueness of their dietary niche are placed on a spectrum from browsers that consume woody (i.e., browse) and herbaceous (i.e., forbs) plants, to grazers with graminoid‐rich diets. However, seasonal changes in plant availability and quality can lead to switching of their dietary niche, even within species. In this study, we examined whether a population of wood bison (Bison bison athabascae) in northeast Alberta, Canada, seasonally switched their foraging behavior, and if so, whether this was associated with changes in nutrient acquisition. We hypothesized that bison should switch foraging behaviors from grazing in the winter when standing, dead graminoids are the only foliar plants readily available to browsing during spring and summer as nutritious and digestible foliar parts of browse and forbs become available. If bison are switching foraging strategy to maximize protein consumption, then there should be a corresponding shift in the nutritional niche. Alternatively, if bison are eating different plants, but consuming similar amounts of nutrients, then bison are switching their dietary niche to maintain a particular nutrient composition. We found wood bison were grazers in the winter and spring, but switch to a browsing during summer. However, only winter nutrient consumption of consumed plants differed significantly among seasons. Between spring and summer, bison maintained a specific nutritional composition in their diet despite compositional differences in the consumed plants. Our evidence suggests that bison are selecting plants to maintain a target macronutrient composition. We posit that herbivore''s can and will switch their dietary niche to maintain a target nutrient composition.     

The metamicrobiome: key determinant of the homeostasis of nutrient recycling

The metamicrobiome is an integrated concept to study carbon and nutrient recycling in ecosystems. Decomposition of plant-derived matter by free-living microbes and fire – two key recycling pathways – are highly sensitive to global change. Mutualistic associations of microbes with plants and animals strongly reduce this sensitivity. By solving a fundamental allometric trade-off between metabolic and homeostatic capacity, these mutualisms enable continued recycling of plant matter where and when conditions are unfavourable for the free-living microbiome. A diverse metamicrobiome – where multiple plant- and animal-associated microbiomes complement the free-living microbiome – thus enhances homeostasis of ecosystem recycling rates in variable environments. Research into metamicrobiome structure and functioning in ecosystems is therefore important for progress towards understanding environmental change.     

Ecology and macroevolution – evolutionary niche monopolisation as a mechanisms of niche conservatism

Explaining macroevolution from microevolution is a key issue in contemporary evolutionary theory. A recurrent macroevolutionary pattern is that some niche‐related traits consistently evolve slower than others, so called niche conservatism. Despite a growing amount of data, the underlying evolutionary processes are not fully understood. I here analyse adaptive radiations in an individual‐based eco‐evolutionary model. I find a coevolutionary mechanism – evolutionary niche monopolisation – as a possibly important generator of niche conservatism. A single lineage of a radiating clade can monopolise, and later diversify within, a substantial part of the available niche space – much larger than what can be explained by limiting similarity. This leads to niche conservatism, since no species evolves into or out of the monopolised region. The region can in this sense also be described as an adaptive zone. The model indicates that evolutionary niche monopolisation is operative in a large part of parameter space, underlining its possible importance. The mechanism is driven by competitive interactions and differences in niche widths in alternative niche dimensions. I discuss plausible examples of evolutionary niche monopolisation in well‐studied natural systems.     

Scale-sensitivity in the measurement and interpretation of environmental niches

Species environmental niches are central to ecology, evolution, and global change research, but their characterization and interpretation depend on the spatial scale (specifically, the spatial grain) of their measurement. We find that the spatial grain of niche measurement is usually uninformed by ecological processes and varies by orders of magnitude. We illustrate the consequences of this variation for the volume, position, and shape of niche estimates, and discuss how it interacts with geographic range size, habitat specialization, and environmental heterogeneity. Spatial grain significantly affects the study of niche breadth, environmental suitability, niche evolution, niche tracking, and climate change effects. These and other fields will benefit from a more mechanism-informed choice of spatial grain and cross-grain evaluations that integrate different data sources.     

苔藓植物相互作用的研究进展

综述了苔藓植物种内和种间正相互作用、种内和种间竞争、生态位与共存等的研究现状及其进展.苔藓植物常为严酷环境中的优势植物,并在保持水分和获取光及养分资源两方面存在权衡.因严酷环境中竞争的重要性相对较低,苔藓植物的正相互作用较为多见.然而,在苔藓植物种内、种间及其与维管植物之间,均不乏竞争的实例.在严酷性较低的环境如过湿的泥炭地中,竞争的重要性增加.多种苔藓植物间可存在竞争等级,该等级往往随环境的变化而变化.随机过程、物种的殖民本质以及更新策略的差异可导致苔藓植物生态位的重叠与共存,但竞争导致生态位分化也是苔藓植物共存的机理之一.苔藓植物不应简单地归类于耐压-杂草型生活史策略者,竞争仍是构建某些苔藓植物群落及其与维管植物共存群落的重要因子之一.     

Feeding patterns in grasshoppers (Orthoptera: Acrididae): Factors influencing diet specialization

Summary Diets of grasshopper species from two arid grassland communities in Trans-Pecos, Texas, were determined by gut analysis. Species-specific food plant choice and niche breadths are presented for each of these species. As a group, grasshoppers range from monophagous to polyphagous feeders although most species fall in the oligophagous to polyphagous group. Phylogenetic constraints are evident such that gomphocerinae are primarily grass feeders while melanoplinae feed predominantly on forbs; the oedipodinae show less clearcut tendencies.Feeding patterns are remarkably constant from site to site and overall, community niche breadth distributions between sites do not differ greatly. Individual species tend to eat the same plant species at various sites and maintain similar niche breadths. Species with relatively specialized diets tend to feed on predictable plant species such as grasses and long-lived perrenial forbs.Grasshopper feeding patterns present some problems to the current theory of herbivore diet specialization since forb feeding melanoplines tend to be polyphagous (contrary to predictions). Life history patterns unrelated to tracking host plants may explain some aspects of diet breadth since diet selectivities are presumably adjusted according to the probability of finding suitable food plants.     

How phenological tracking shapes species and communities in non-stationary environments

Climate change alters the environments of all species. Predicting species responses requires understanding how species track environmental change, and how such tracking shapes communities. Growing empirical evidence suggests that how species track phenologically – how an organism shifts the timing of major biological events in response to the environment – is linked to species performance and community structure. Such research tantalizingly suggests a potential framework to predict the winners and losers of climate change, and the future communities we can expect. But developing this framework requires far greater efforts to ground empirical studies of phenological tracking in relevant ecological theory. Here we review the concept of phenological tracking in empirical studies and through the lens of coexistence theory to show why a community-level perspective is critical to accurate predictions with climate change. While much current theory for tracking ignores the importance of a multi-species context, basic community assembly theory predicts that competition will drive variation in tracking and trade-offs with other traits. We highlight how existing community assembly theory can help understand tracking in stationary and non-stationary systems. But major advances in predicting the species- and community-level consequences of climate change will require advances in theoretical and empirical studies. We outline a path forward built on greater efforts to integrate priority effects into modern coexistence theory, improved empirical estimates of multivariate environmental change, and clearly defined estimates of phenological tracking and its underlying environmental cues.