Processes regulating early post-settlement habitat use in a subtidal assemblage of brachyuran decapods

In highly mobile animals post-settlement dispersion of juveniles can strongly influence the observed patterns of abundance and distribution. To explore the relative importance of factors regulating the use of habitat by crabs we performed a multi-species manipulative experiment in a subtidal environment of the central Chilean coast. First, demographic patterns were established by performing a year-round crab survey in three discrete and well-known subtidal crab habitats: (1) algal turf, (2) cobbles and (3) shell hash. Second, habitat preferences were experimentally evaluated using concrete trays that were filled with different substrate types that simulate natural habitats. Settlement and recruitment rates were estimated from experimental trays that were left in the field and surveyed after 2 weeks (complete experiment was repeated 7 times throughout 1 year). Third, mortality, due to predation, was assessed by covering 50% of the trays with a 4-mm mesh-size screen that excluded large predators (i.e., fishes, shrimps). Fourth, habitat colonization rates were evaluated by quantifying the arrival, into open trays, of large juveniles (secondary dispersal). The most abundant species in this system (Paraxhantus barbiger, Cancer setosus, Taliepus dentatus and Pilumnoides perlatus) displayed clear habitat preferences at the time of settlement, evidenced by differences in density of recruits among habitats. Recruitment regulation by predation seemed to explain the observed patterns in only one case. For most species, however, evidence of ontogenetic change in the use of habitat, through active habitat redistribution by large juveniles, was detected. Thus, secondary dispersal among habitats seems to outweigh the influence of megalopae's habitat selection and post-settlement mortality as responsible for the observed demographic patterns.     

Colonization of floating seaweed by pelagic and subtidal benthic animals in southwestern Iceland

Coastal floating seaweed, originating from the intertidal, is colonized by various pelagic and subtidal benthic animals. At southwestern Iceland, common macrofaunal colonizers include the fish Cyclopterus lumpus L., the harpacticoid Parathalestris croni (Krøyer), the amphipods Calliopius laeviusculus (Krøyer), Gammarellus angulosus(Rathke), Dexamine thea Boeck and Ischyrocerus anguipes (Krøyer), and the isopod Idotea baltica Pallas. The colonization patterns of these species were studied by collecting samples from experimental and natural clumps of floating seaweed at approximately monthly intervals for ca. 18 months. The occurrence of colonizers was highly seasonal with maximum numbers between April and September. For most species, numbers were correlated with weight of clumps. The relationship of density (numbers/100 g algae) to weight of clump and distance from shore varied between species. The algal species composition of clumps appeared to influence some colonizers. Only juvenile C. lumpus were found, while all P. croni were sexually mature; juveniles predominated in other species. The different colonization patterns of the species can be explained partly by their biological traits. The clumps are vital for the breeding of P. croni and are used for feeding by C. lumpus fry. Other species possibly colonize floating algae accidentally, being programmed to seek attached vegetation. Floating clumps may, nevertheless, serve to disperse these species.     

Effect of simulated macroalgae on the fish assemblage associated with a temperate reef system

Increased habitat complexity is supposed to promote increased diversity, abundance and biomass. This study tested the effect of the macroalgal cover on temperate reef fishes by mimicking macroalgae on artificial reefs in NW Sicily (Mediterranean Sea). Macroalgal cover affected reef fishes in different ways and independently of intrinsic temporal trends. The fish assemblages of manipulated and control artificial reef units differed in the relative abundances of the associated species, but little in species composition. In line with studies in seagrass habitats, fishes were most abundant in reefs covered by artificial macroalgae. Three species (Boops boops, Serranus scriba and Symphodus ocellatus) exhibited consistently greater abundance on vegetated reef units than on control reef units. The total number of species and the abundance of three particular species (S. scriba, S. ocellatus and Thalassoma pavo) displayed temporal trends which were independent on short and large temporal scales. Only fish total biomass and one species (Spicara flexuosa) displayed strong effects of interaction among the experimental factors. Mechanisms to explain these findings are discussed from observational evidence on habitat use and interactions among multiple species. This study highlights that manipulative experiments involving repeated sampling of fish in artificial habitats appear to be a valid approach to study fish-habitat relationships in fluctuating environments. It is also concluded that macroalgae mimics may serve as a tool for restoring lost marine vegetated habitats when current human-induced conditions prevent the recovery of pristine macroalgal stands.     

The role of recruitment in structuring patterns of small-scale spatial variability in intertidal and subtidal algal turfs

Recruitment is often important in structuring patterns of distribution and abundance of algal assemblages. Intertidal and subtidal turfing algal assemblages consistently vary on small spatial scales (tens of centimetres), and this variability may be due to patterns of recruitment varying on similar spatial scales. The validity of this model was evaluated by testing the hypothesis that the numbers and types of taxa recruiting to turfs would vary at small spatial scales within intertidal and within subtidal habitats. Abundances of algal recruits were estimated on sandstone plates that were placed at a number of spatial scales within intertidal and within subtidal habitats (centimetres to tens of metres). Significant differences in entire assemblages were found only between habitats. This was explained by abundances of individual taxa, which generally varied between intertidal and subtidal habitats or between sites within habitats. Only small proportions of the overall spatial variation (dissimilarity) could be explained at the scale of replicate recruitment plates that were centimetres apart. Results indicate that while recruitment may contribute to differences between intertidal and subtidal habitats, it cannot explain the small-scale spatial variability in established turfing algal assemblages within these habitats. There was some evidence to suggest that recruitment may contribute to variability in established turfing algal assemblages but only over longer time scales than examined here.     

Coralline algal nodules off Fraser Island, eastern Australia

Summary Calcareous red algal nodules growing on mobile substrates have been sampled from 28 to 117m off Fraser Island in southern Queensland, eastern Australia. This is a subtropical, transitional area between the tropical Great Barrier Reef to the north and temperate, cooler waters to the south. Red algal nodules are the most common components in bioclastic gravels that extend from about 50 to 110 m and locally cover 40–50% of the seafloor. Variations in the overall character and floristic composition of the nodules with depth can be observed. Algal nodules comprise algal covered pebbles/cobbles and rhodoliths in depths shallower than 60 m whereas only rhodoliths occur in deeper settings. No changes in nodule shape occur but shallower algal nodules have larger mean size with higher standard deviation than the deeper ones (39.2 vs. 30.5 mm and 20.5 vs. 6.3 mm s.d.). Living and subrecent red algae in nodules shallower than 60 m are mainly Melobesioideae and peyssonneliaceans with minor Lithophylloideae and Mastophoroideae. Most plants belong to a few species of the generaPhymatolithon andLithothamnion. Below 68 m, rhodoliths are dominated by the family Sporolithaceae, melobesioids and peyssonneliaceans.Sporolithon is the main component below 80 m. Algal growth forms are mostly smooth encrusting to warty with no depth variation. Maximum plant thickness, however, decreases with increasing depth. Thallus thickness in the deeper water samples is more than three times smaller than in those from shallower waters. These data are important for understanding the paleoenvironmental context of deposition of the abundant coralline algal limestones with similar algal nodules found in the geological record.     

Ecology of marine algae on rocky shores and subtidal reefs in temperate Australia

Experiments in intertidal and subtidal rocky marine habitats in temperate Australia have identified the effects of various biological and physical factors on algal assemblages. In intertidal habitats, these involve micro- and macro-algae and grazing by gastropods. In subtidal habitats, interactions among micro- and macro-algae, echinoids, gastropods, micro-invertebrates and sessile invertebrates have been studied. Experimental studies on physical disturbances of algal assemblages have focussed on the effects of desiccation and storms. Most studies have not considered more than one spatial or temporal scale. Few have been concerned with seasonal influences and fewer have been concerned with variation from year to year. Most of the work lacks applicability to biogeographic comparisons. More experimental work across a variety of spatial and temporal scales is required to determine significant biological and physical processes affecting structure of algal assemblages across broad areas of temperate Australia.     

Vertical and Temporal Patterns of Biodiversity of Fruit-Feeding Butterflies in a Tropical Forest in Uganda

Quick surveys are often used by conservation biologists to assess biodiversity. In tropical forests, fruit-feeding butterflies are a convenient indicator group because they can be readily trapped and are comparatively easy to identify. However, studies carried out in Costa Rica and Ecuador have revealed that long-term sampling is needed to estimate biodiversity accurately. Furthermore, almost half of the biodiversity of fruit-feeding butterflies in the neotropics was found to be in the canopy. Short term sampling in the understory can, therefore, lead to inaccurate estimates of species richness and worse, to poorly informed conservation decisions. Comparable to the studies in South America, we performed a long-term trapping study of the same guild of butterflies in the understory and canopy of Kibale Forest in Uganda, to describe temporal and vertical patterns of biodiversity. We caught 32,308 individuals of 94 species over three years. About 14% of these species could be categorized as canopy specialists and 68% as understory specialists. Temporal variation was extensive and did not follow a clear seasonal pattern. This is the first study in an African forest with continuous sampling of fruit-feeding butterflies over multiple years and in both canopy and understory.     

An integrated study of the temporal and spatial variation in the supply of propagules, recruitment and assemblages of intertidal macroalgae on a wave-exposed rocky coast, Victoria, Australia

Recruitment is known to influence distributions and abundances of benthic marine organisms. It is therefore important to document patterns of variability in recruitment and how these relate to patterns in established assemblages. This study provides an integrated assessment of the temporal and spatial variation in supply and recruitment of propagules and established populations of several macroalgae. Propagules in water samples from two stages of the incoming tide, recruitment to artificial substrata and percentage cover of species established on the shore were recorded every 2 months from December 1994 to October 1995, in two zones of an intertidal, wave-exposed rocky shore. Variability in recruitment was measured at three spatial scales: 10s cm, 100s cm and 100s m. Availability and recruitment of most taxa were greatest between April and August, although many species had available propagules and recruited throughout the year. Temporal variation in the established assemblages was, however, more species-specific. Differences in established assemblages between zones were reflected in differences in availability and recruitment of propagules between zones. Recruitment could not be predicted directly from supply of propagules, but the two processes were linked. For most species, the greatest variation in recruitment occurred at the smallest spatial scale of 10s cm, although there was also considerable large-scale (between site) variation in recruitment of several species. Results indicate that while pre-and post-settlement mortality are likely to influence macroalgal distribution and abundance, the temporal and spatial variability in supply and recruitment of propagules can explain much of the patchiness in macroalgal assemblages.     

Leaf-litter application to a sandy soil modifies phosphorus leaching over the wet season of southwestern Australia

Use of science in wetland management has increased considerably over the last 50 years but there is still scope for improving the transfer of research results into management. Issues that lead to less than optimal transfer include: (1) managers not accessing existing technical information adequately, (2) researchers addressing issues of peripheral importance to management rather than key information needs, (3) managers failing to identify significant information gaps and to resource appropriate research in a timely way, (4) scale of research and certainty of results being inappropriate for application to broad-scale situations by managers responsible for outcomes, and (5) funding bodies not fully recognizing that transfer of research results to management requires a development phase. Establishment of recovery catchments in the Western Australian wheatbelt, with the aim of maintaining regional biodiversity in the face of increasing dryland salinisation, is a program that relies on transferring research results into management. However, the multi-disciplinary nature of managing salinisation is a challenge for many catchment managers and formal management systems are probably an important adjunct to close knowledge of the catchment when making management decisions. An examination of management planning and actions in the Lake Warden Natural Diversity Recovery Catchment, south-west Western Australia, highlights the continuum between research and management, the importance of understanding the physical environment when managing biodiversity, and the fact that much wetland conservation relies on management action in terrestrial landscapes.     

Vertical stratification of the termite assemblage in a neotropical rainforest

The importance of termites as decomposers in tropical forests has long been recognized. Studies on the richness and diversity of termite species and their ecological function have flourished in more recent times, but these have been mostly conducted in a thin stratum within a standing man’s reach. Our aims were to evaluate the specific richness and composition of the termite assemblage in the canopy of a tropical rainforest and to determine its originality with respect to the sympatric ground-level fauna. We conducted systematic searches for canopy termites, together with conventional sampling of the sympatric ground-level fauna, in the San Lorenzo forest, Panama. We hypothesized that (1) the canopy accommodates two categories of wood-feeding termites (long-distance foragers and small-colony “one-piece” species) and possibly soil-feeders in suspended soil-like habitats; (2) due to the abundance of soil-feeders, the overall diversity of the ground fauna is higher than that of the canopy; (3) differences in microclimate and resource accessibility favour vertical stratification among wood-feeders. Sixty-three canopy samples yielded ten species of termites, all wood-feeders. Five of these were not found at ground level, although a total of 243 ground samples were collected, representing 29 species. In addition to long-distance foragers (Microcerotermes and Nasutitermes spp.) and small-colony termites (mostly Kalotermitidae), the canopy fauna included Termes hispaniolae, a wood-feeding Termitidae from an allegedly soil-feeding genus, living in large dead branches. Soil-feeders were absent from the canopy, probably because large epiphytes were scarce. As predicted, the ground fauna was much richer than that of the canopy, but the species richness of both habitats was similar when only wood-feeders were considered. Vertical stratification was strongly marked among wood-feeders, as all common species, apart from the arboreal-nesting Microcerotermes arboreus, could unequivocally be assigned to either a ground or a canopy group. The canopy, therefore, contributes significantly to the total species richness of the termite assemblage, and the diversity, abundance and ecological importance of canopy termites in tropical rainforests may be higher than previously recognized.Electronic Supplementary Material Supplementary material is available to authorized users in the online version of this article at .     

Dissolved and particulate organic carbon in two wetlands in southwestern New South Wales,Australia

Concentrations of dissolved (DOC) and particulate organic carbon (POC) in two billabong wetlands (Murrumbidgil Swamp and Lake Merrimajeel) in inland temperate Australia were positively correlated with leaf fall from river red gums Eucalyptus camaldulensis (DOC and POC in Murrumbidgil Swamp), phytoplankton productivity (DOC in Murrumbidgil Swamp, DOC and POC in Lake Merrimajeel), and with biomass of aquatic macrophytes (DOC in the two wetlands). DOC correlated with water level at both sites. Mean concentrations of DOC (Murrumbidgil Swamp, 36.0 gm^-3; Lake Merrinmajeel, 27.5 g m^-3) and POC (15.0 g m^-3; 15.5 g m^-3) were high compared with other water bodies worldwide, although average for wetlands. The relatively high concentrations of DOC and POC in the study wetlands appear to be the result of their high rates of plant production, and input of leaves from river red gums.     

Bacterial utilization of algal extracellular products in a southwestern reservoir

Rates of carbon flow from phytoplankton to bacteria were estimated for Lake Arlington, Texas. The lake is a warm (annual temperature range 7 to 35 °C), shallow, monomictic reservoir with limited macrophyte development in the littoral zone. Samples were collected from 6 depths within the photic zone from a site located over the deepest portion of the lake. Primary production and exudate production were calculated from NaH¹⁴CO₃ incorporation. Bacterial production was calculated from [methyl-³H]-thymidine incorporation. Depth averaged primary production ranged from a seasonal low of 9.0 μg C l⁻¹ h⁻¹ in January to a seasonal maximum of 153 μg C l⁻¹ h⁻¹ during holomixis in September. Annual depth-averaged production was 67.8 ± 7.3 μg C l⁻¹ h⁻¹. Exudate production ranged between 21.9 and 54.2% of primary production and annually averaged 30.8%. Bacterial production ranged between 1.7 and 46.0 μg C l⁻¹ h⁻¹ and annually averaged 16.0 ± 1.9 μg C l⁻¹ h⁻¹. Bacteria processed approximately 70% of exudate and incorporated 35% into biomass. Bacterial production was positively correlated with total primary production (r = 0.38, p < 0.003, n = 6), particulate primary production (r = 0.34, p < 0.004, n = 70) and bacterial uptake of exudate (r = 0.43, p < 0.001, n = 68). While exudate was readily utilized by bacteria it dit not appear to be produced in sufficient quantity or at a sufficient rate to serve as the sole or a major source of carbon supporting bacterial growth.     

The algal flora of a subtidal Zostera bed in ventry bay,Southwest Ireland

Ventry Bay in County Kerry, southwest Ireland, was surveyed in June 1977 to a depth of 17 m using SCUBA and a grid of stations which were 400 m apart. The principal substrate was sand. Zostera marina L. was dominant and widespread from 0.5 to 13 m below Chart Datum and is the deepest-growing Zostera in Northwest Europe. Sixty species of algae were found and their occurrence and that of Zostera marina was subjected to cluster analysis resulting in one distinct cluster of Zostera marina, Ulva lactuca L., Gracilaria verrucosa (Huds.) Papenf., Polysiphonia elongata (Huds.) Spreng., Ectocarpus sp., Ceramium rubrum (Huds.) C. Ag. and Brongniartella byssoides (Good. et Woodw.) Schmitz. These algae are so common and widespread in the subtidal zone that their co-occurrence with Zostera is not considered to be significant. Zostera occurs virtually as monospecific stands in sand and the co-occurrence of any macroalgae is largely fortuitous and dependent on the heterogeneity of the substrate.     

Colonization of nascent, deep-sea hydrothermal vents by a novel Archaeal and Nanoarchaeal assemblage

Active deep-sea hydrothermal vents are areas of intense mixing and severe thermal and chemical gradients, fostering a biotope rich in novel hyperthermophilic microorganisms and metabolic pathways. The goal of this study was to identify the earliest archaeal colonizers of nascent hydrothermal chimneys, organisms that may be previously uncharacterized as they are quickly replaced by a more stable climax community. During expeditions in 2001 and 2002 to the hydrothermal vents of the East Pacific Rise (EPR) (9 degrees 50'N, 104 degrees 17'W), we removed actively venting chimneys and in their place deployed mineral chambers and sampling units that promoted the growth of new, natural hydrothermal chimneys and allowed their collection within hours of formation. These samples were compared with those collected from established hydrothermal chimneys from EPR and Guaymas Basin vent sites. Using molecular and phylogenetic analysis of the 16S rDNA, we show here that at high temperatures, early colonization of a natural chimney is dominated by members of the archaeal genus Ignicoccus and its symbiont, Nanoarchaeum. We have identified 19 unique sequences closely related to the nanoarchaeal group, and five archaeal sequences that group closely with Ignicoccus. These organisms were found to colonize a natural, high temperature protochimney and vent-like mineral assemblages deployed over high temperature outflows within 92 h. When compared phylogenetically, several of these colonizing organisms form a unique clade independent of those found in mature chimneys and low-temperature mineral chamber samples. As a model ecosystem, the identification of pioneering consortia in deep-sea hydrothermal vents may help advance the understanding of how early microbial life forms gained a foothold in hydrothermal systems on early Earth and potentially on other planetary bodies.     

Evaluation of techniques used in the assessment of subtidal epibiotic assemblage structure

A comparative study was carried out to evaluate the efficiency of a number of techniques commonly used for assessing the structure of subtidal epifaunal communities. Assessments were made of the epifaunal assemblages fouling two substrata: concrete and PVC plastic. Where possible, each technique was undertaken in three ways, namely, in situ underwater, in the laboratory and using image analysis on photographs taken in situ. Comparisons were also made of biomass estimates made on samples taken in situ and in the laboratory. All method and technique combinations assessed detected differences in the epibiotic communities associated with the two fouling substrata. Sampling in situ, in the laboratory and using image analysis gave similar estimates of percent cover. However, there were significant differences in measurements made for most taxa with respect to abundance and frequency counts depending on how the technique was carried out. Laboratory-based sampling of abundance and frequency counts and biomass determinations, rather than in situ or image-analysis based sampling, are recommended for use in future studies of epifaunal fouling.     

A new species ofArnoglossus (Pleuronectiformes: Bothidae) from the southwestern coast of Australia

A new bothid flounder,Arnoglossus micrommatus, is described from the southwestern coast of Australia (off Albany, Western Australia). This species is distinguished from other species ofArnoglossus by combination of the following characters: gill-rakers serrated on posterior margin; upper jaw length 2.83–3.12 in head length (HL); upper eye diameter 4.17–5.51 in HL; scales in lateral line 52–62; vertebrae 11+28−29=3t-40.     

From the mountains to the sea: assemblage structure and dynamics in Chironomidae (Insecta: Diptera) in the Clyde River estuarine gradient, New South Wales, south-eastern Australia

Abstract  Chironomidae (Insecta: Diptera: non-biting midges) were surveyed at five shallow riffle stations along the estuarine gradient of the Clyde River, southern New South Wales (35°45'S, 150°15'E). Benthic populations were sampled seasonally between April 2001 and January 2002, between an uppermost fully fresh station and 7 km south of the tidal limit at Shallow Crossing, encompassing a 23 km stretch. Biological structure and integrity of chironomid assemblages, which are essentially unknown in eastern Australia's estuarine environments, were elucidated. Assemblages were diverse: from 5732 chironomid larvae, 45 species belonging to four subfamilies were identified from riffles. All chironomid assemblages were strongly structured and non-random with respect to spatial position along the salinity gradient although relatively random with respect to temporal shifts between the five seasonal samples. Generally, the salinity gradient had strong effects on assemblage composition but no discrete brackish fauna was identifiable, and the abundance of many species declined gradually with distance from the freshest station. Dominant taxa in the brackish zone were Parakiefferiella ' variegatus ' and two species of Cladotanytarsus . Notably, the little-known Semiocladius crassipennis Skuse (Orthocladiinae) was abundant at the most marine-influenced station. Taxa present exclusively in freshwaters included several Tanypodinae notably absent from sites below Shallow Crossing at salinities normally tolerated in athalassic waters. Other species restricted to freshwaters included Nanocladius sp., Demicryptochironomus (Irmakia) sp., Polypedilum vespertinus (Skuse), Zavrelliella fuscoguttata (Kieffer), Riethia stictoptera (Kieffer) and Podonomopsis sp.     

Epiphytism in a subtidal natural bed of Gracilaria gracilis of southwestern Atlantic coast (Chubut, Argentina)

The diversity of epiphytes, their temporal abundance variation and the anatomical structure of host–epiphyte interfaces were studied in the agarophyte Gracilaria gracilis from a natural bed in Bahía Bustamante, Chubut Province, Argentina. Twenty-nine algal species were recorded as epiphytes during 2 years of monthly sampling (March 2006–February 2008). Total epiphyte density ranged between 0.037 ind. cm^?2 (November 2006) and 39.37 ind. cm^?2 (April 2007), with higher density values throughout the second sampling year. Ceramiales species were the most abundant epiphytes. The density of Ceramium rubrum ranged from 0.09 ind. cm^?2 (52 % of the total amount) in September 2006 to 17.4 ind. cm^?2 (44.18 % of the total amount) in April 2007. Epiphyte infection was more dependent on spore recruitment and sporeling development, especially on thalli derived from fragmentation, than on seasonal environmental variations. The different infections were analysed, taking into account the epiphytic attachment strength and invasiveness and the degree of damage inflicted on the host. Calothrix confervicola was one of the most abundant species. This epiphyte, weakly attached to the host surface, generated no host tissue damage. In contrast, C. rubrum, Polysiphonia abscissa and other Ceramiales were the species that caused more damage to the host because their rhizoids penetrated the cortical portion of the host thallus, sometimes reaching the medullary tissue. Some generalisations and characterisations of the different epiphyte groups in relation to their consequences to Gracilaria spp. are presented.     

Pandanus tectorius Parkins, in Australia: a conservative view

Pandanus tectorius Parkins, is a widespread and variable species with many forms, often local, some of which have been considered as distinct species. Fourteen binomials are here considered as synonyms of P. tectorius, but several of them warrant retention at varietal rank. Comments on the variability and its relation to a species concept in the genus Pandanus are included.     

Response of an algal assemblage to nutrient enrichment and shading in a Hawaiian stream

To investigate the effects of nitrate enrichment, phosphate enrichment, and light availability on benthic algae, nutrient-diffusing clay flowerpots were colonized with algae at two sites in a Hawaiian stream during spring and autumn 2002 using a randomized factorial design. The algal assemblage that developed under the experimental conditions was investigated by determining biomass (ash-free dry mass and chlorophyll a concentrations) and composition of the diatom assemblage. In situ pulse amplitude-modulated fluorometry was also used to model photosynthetic rate of the algal assemblage. Algal biomass and maximum photosynthetic rate were significantly higher at the unshaded site than at the shaded site. These parameters were higher at the unshaded site with either nitrate, or to a lesser degree, nitrate plus phosphate enrichment. Analysis of similarity of diatom assemblages showed significant differences between shaded and unshaded sites, as well as between spring and autumn experiments, but not between nutrient treatments. However, several individual species of diatoms responded significantly to nitrate enrichment. These results demonstrate that light availability (shaded vs. unshaded) is the primary limiting factor to algal growth in this stream, with nitrogen as a secondary limiting factor.