Topography of cyclodextrin inclusion complexes : Part I. Classification of crystallographic data of α-cyclodextrin inclusion complexes

The crystallographic and stoichiometric data obtained for 17 different inclusion complexes of α-cyclodextrin are reported. The cell dimensions and space-group symmetries reflect the packing arrangement of the torus-shaped host molecules and are largely determined by the size and ionic character of the guest molecules.In the series acetic acid, propionic acid, butyric acid, valeric acid, the first three complexes with α-cyclodextrin crystallize in a cage-type structure with space group P2₁2₁2₁, which is characteristic or small, non-ionic guest molecules. The valeric acid molecule seems to be too long to be accommodated in a cage structure; thus, the α-cyclodextrin molecules are arranged such that a structure consisting of parallel channels is formed. This packing is typical for the inclusion of long, thin, or ionic guest molecules. A third class of complexes with structures differing from the two described was also observed.A correlation exists between the type of inclusion complex and the volume required for a complex molecule: 1200–≈ 1400 ų for molecular guests, and 1400–1500 ų for ionic guests.     

Complexes of antiparallel telomeric G-quadruplex d(TTAGGG)4 with carboxymethyl tetracationic porphyrins

Porphyrins are a chemical class that is widely used in drug design. Cationic porphyrins may bind to DNA guanine quadruplexes. We report the parameters of the binding of 5,10,15,20-tetrakis(N-carboxymethyl-4-pyridinium) porphyrin (P1) and 5,10,15,20-tetrakis(N-etoxycarbonylmethyl-4-pyridinium) porphyrin (P2) to antiparallel telomeric G-quadruplex formed by d(TTAGGG)₄ sequence (TelQ). The binding constants (K _i ) and the number of binding sites (N _j ) were determined from absorption isotherms generated from the absorption spectra of complexes of P1 and P2 with TelQ. Compound P1 demonstrated a high affinity to TelQ (K _i = (40 ± 6) × 10⁶ M^?1, N ₁ = 1; K ₂ = (5.4 ± 0.4) × 10⁶ M^?1, N ₂ = 2). In contrast, the binding constants of P2-TelQ complexes (K ₁ = (3.1 ± 0.2) × 10⁶ M^?1, N ₁ = 1; K ₂ = (1.2 ± 0.2) × 10⁶ M^?1, N ₂ = 2) were one order of magnitude smaller than the corresponding values for P2-TelQ complexes. Measurements of the quantum yield and fluorescence lifetime of the drug’s TelQ complexes revealed two types of binding sites for P1 and P2 on the quadruplex oligonucleotide. We concluded that strong complexes can result from the interaction of the porphyrins with TTA loops whereas the weaker complexes are formed with G-quartets. The altered TelQ conformation detected by the circular dichroism spectra of P1-TelQ complexes can be explained by the disruption of the G-quartet. We conclude that peripheral carboxy groups contribute to the high affinity of P1 for the antiparallel telomeric G-quadruplex.     

Detecting the bonding type of dithiocarbamate ligands in their complexes as inferred from the asymmetric CS mode

The IR spectra of a number of dithiocarbamate (dtc) complexes (M(R₂dtc)₂, n = 2, M = Ni, Cu, Zn, Cd, Pb, Hg, Se, Te; n = 3, M = Cr, Fe, Co, As, Sb, Bi, R = Et, Prⁿ, Prⁱ, Buⁿ, Brⁱ, as well as the laser Raman spectra of a few colourless compounds (M(Et₂dtc)₂ M = Zn, Cd, Pb, Hg), have been recorded and discussed as to the validity of the Bonati-Ugo (BU) criterion for discerning the dtc bonding type from its ν_as(CS) band (ca. 1000 cm^?1), By comparing these bands for dtc complexes containing different N-substituted ligands, their splittings can be proved to be due to interligand coupling of the CS ligand modes. Further comparison with X-ray diffraction data shows that the dtc ligands, irrespective of the host complex or the ligand bonding type, are at sites of C₁ symmetry, thus ruling out the possibility to detect the ligand bonding type from the solid state vibrational spectra. New evidence is presented that the RN modes are present in the 1000 cm^?1 region, thus making it unsuitable for the determination of the ligand bonding type.     

Metal ion-biomolecule interactions. III. Versatility of metal ion binding to imidazoles. Synthesis and 1H nmr spectroscopic properties of N- and C-bound mercury(II) complexes

Methylmercury(II) and mercury(II) complexes of imidazole (1), 1-methylimidazole (2), and the 1,3-dimethylimidazolium ion (3) have been prepared in aqueous or ethanolic solution. Elemental analysis and ¹H nmr spectroscopy have been used to characterize the complexes. The MeHg (Me = methyl) binding sites have been identified as N₁, N₃ (1), N₃, C₂ (2), and C₂ (3). Reaction with HgO leads to the formation of Hg-bridged complexes of the type Im-Hg-Im, (Im = imidazole), where bonding occurs through N₁ (1) and C₂ (3); the latter is also formed as a result of symmetrization of the C₂-bound MeHg complex. The formation of the C₂-bound (carbene) complexes is discussed in terms of the increased acidity of the C₂ proton resulting from coordination of an electrophilic species at N₃. Based on electrostatic considerations, there appears to be a “minimum degree of activation” required before C₂ bonding can occur, which explains the lack of this coordination mode in 1. ¹⁹⁹Hg-¹H spin-spin coupling (⁴J) is observed for C-bound mercury, but not for N-bound mercury, which is interpreted in terms of a decreased ligand exchange rate in the former case, due to the greater stability of the Hg-C bond. ²J coupling constants measured in (CD₃)₂SO for a number of MeHg complexes of heterocyclic ligands (including the imidazoles of the present study) correlate well with the ligand pK_a (25°C, aqueous solution), according to ²J = ?3.88 pK_a + 248.5. Results in the present work are discussed in relation to our previous work with nucleosides. The significance of the results to biological systems is considered.     

Metal ion complexes of d-biotin in solution. Stability of the stereoselective thioether coordination

By spectrophotometry and ¹H nmr, several of the stability constants of the thioether complexes between Mg²⁺, Ca²⁺, Mn²⁺, Cu²⁺, Zn²⁺, Cd²⁺, or Ag⁺ and d-biotin (Bio), tetrahydrothiophene (Tht), and dimethyl sulfide (Dms) have been measured in 50% aqueous ethanol, 96% N,N-dimethylformamide (DMF), 98% d₆-dimethyl sulfoxide, or in D₂O. With decreasing concentration of water, the thioether interaction increases with the biologically important metal ions, whereas, e.g., Ag⁺ behaves in the opposite way. The stability of these complexes is, in general, quite small: for example, with d-biotin in 96% DMF (I = 1.0; 25°C) log K_M(Bio)^M = 0.03 and 1.64 for Cu²⁺ and Ag⁺, respectively; in D₂O (I = 0.5 for Ag⁺, all others 2–5; 27°C) log K_M(Bio)^M ? ?1.0, ?1.4, ?1.2, ?0.9, or 4.20 for Mg²⁺, Ca²⁺, Zn²⁺, Cd²⁺, or Ag⁺. In those cases where the difference log K_M(Tht)^M ? log K_M(Bio)^M can be calculated, it is in the order of 0.3 log units; this observation, as well as the chemical shifts measured, confirm the earlier suggestion that the interaction at the sulfur of biotin is stereoselective: the metal ion coordinates from “below” the tetrahydrothiophene ring of biotin to the sulfur atom, i.e., trans to the urea ring. It is emphasized that despite the low stability of these complexes with the biologically meaningful metal ions, the extent of the interaction is enough to create specific structures.     

Synthesis,FT-IR and 1H NMR studies of alkali and alkaline earth metal complexes with guanosine

The synthesis of complexes of Li(I), K(I), Mg(II), Ca(II) and Ba(II) with guanosine in basic non aqueous solutions is described. The complexes were of two types: (1) complexes having the general formula, M(Guo)_nX_m·YH₂O·ZC₂H₅OH, where M = Mg(II), Ca(II), Ba(II) and Li(I), n = 1,2,4, X = Cl^?, Br^?, NO₃^?, ClO₄^? and OH^?, m = 1,2, Y = 0?6 and X = 0?2, and (2) complexes with the general formula, M(GuoH-1)(OH)_n^?1·YH₂O, where M = K(I), Ca(Il) and Ba(II), GuoH-1 =Ionized guanosine at N₁, n = 1,2 and Y = 1?3. The complexes are characterized by their proton nuclear magnetic resonance (¹H NMR) and Fourier transform infrared (FT-IR) spectra. The FT-IR and ¹H NMR data of the non ionized nucleoside complexes suggest that the metal binding is through the N₇-site of guanine and that the anion (X) is hydrogen bonded to N₁H and NH₂ groups. In the N₁-ionized guanosine complexes the metal binding is via the O₆^? of guanine. All the complexes formed exhibited a transition of the sugar conformation from C₂′-endo/anti in the free nucleoside to C₃′-endo/anti in the metal complexes.     

Synthesis, characterization, spectroscopic and electrochemical properties of trans,trans,trans-bis(triphenyl phosphine) bis(aroyl hydrazonato)ruthenium(II) complexes

Four ruthenium (II) complexes of general formula Ru(PPh₃)₂(L)₂ have been synthesized and characterized. The spectroscopic and cyclic voltammetric studies of these complexes are also reported. X-ray crystal structure determination of two of the complexes reveal that Ru(II) occupies trans,trans,trans-(t,t,t) N₂O₂P₂ centrosymmetric octahedral environments, with the ligand pair occupying the equatorial plane. ³¹P NMR confirms the presence of two trans-PPh₃ groups in all the complexes. The transformation of the complexes in dichloromethane solution is studied by spectrophotometry and ³¹P NMR spectroscopy.     

Complexes of hybrid ligands. Synthesis of mixed-ligand,phosphino-alkoxide complexes of Pd2+: the crystal and molecular structure of the complex Ph2 PCH2C(CF3 )2OPdCl(PPh2Me)

The hybrid, bidentate, diarylphosphino-alkoxide ligand PPh₂CH₂C(CF₃)₂O⁻, L¹, gives the Pd²⁺ bis- complex Pd(L¹)₂, from which the chloride-bridged dinuclear complex [(L¹)Pd(μ-Cl)₂Pd(L¹)] is made by reaction with PdCl₂(PhCN)₂. Cleavage of the dinuclear complex with monodentate ligands L² then gives Pd(L¹)Cl(L²) (L² =PPh₃, PPh₂Me, PPhMe₂, PMe₃, SMe₂, or pyridine); NMR data show that PR₃ is cis to the phosphine site in L¹ in these complexes, but SMe₂ or pyridine are probably trans.A complete crystal and molecular structural determination has been made for cis-Pd(L¹)Cl(PPh₂Me). Crystals are monoclinic, space group P2₁/c, a = 10.821(1), b = 14.600(1), c = 18.674(2) Å, β = 101.25(1)°, V = 2893 ų, Z = 4. Least-squares refinement on F of 361 variables using 3977 observations converged at a conventional agreement factor R = 0.025. The complex is square-planar, with the two phosphines cis; the 5-membered chelate ring is in a dissymmetric envelope conformation. The PdP bonds differ in length, with that to the unidentate phosphine, 2.259(1) Å, being significantly longer than that to the phosphine on the chelating ligand, 2.231(1) Å.     

Syntheses of linear-type S-bridged trinuclear complexes composed of heavy d metal ions and 2-aminoethanethiolate: comparative characterization by X-ray diffraction, spectroscopy and electrochemistry

The S-bridged trinuclear complexes composed of heavy d⁶ metal ions, [Rh^III{M(aet)₃}₂]³⁺ (M=Ir^III(1), Rh^III(2); aet = 2-aminoethanethiolate), have been prepared by the reactions of fac(S)-[M(aet)₃] with RhCl₃ · 3H₂O. The complexes were separated into meso (1a, 2a) and rac (1b, 2b) isomers by SP-Sephadex C-25 column chromatography. 1b and 2b were optically resolved by the column chromatographic method and characterized by CD spectroscopy. Crystal structures of 1a, 1b and 2a were determined by X-ray diffraction, and it was found that they consist of linear-type trinuclear structures. The central Rh(III) ion in the present complexes has d⁶ electronic configuration with the non-degenerated A-type cubic field term, and showed long Rh?M distances, acute S-M-S angles and obtuse Rh-S-M angles. These are in contrast with the complexes having the degenerated T-type cubic field term such as [M^′{M(aet)₃}₂]ⁿ⁺ (M^′=V^III, Mo^IV and Re^III, M=Ir^III, Rh^III, n=3 or 4). All the isomers have been comparatively characterized and discussed in solid state and the solution for spectrochemical and electrochemical properties.     

Determination of Branched β-Cyclodextrin–Prostaglandin Complexes Using Electrospray Ionization Mass Spectrometry

Mass spectral measurements by electrospray ionization mass spectrometry (ESI-MS) detected the ions of β-cyclodextrin (βCD) or branched βCDs (glucosyl-, galactosyl-, mannosyl- and maltosyl-βCD)–prostaglandins (PGs: PGA₂, PGD₂, PGE₁, PGE₂, PGF_2α and PGJ₂) complexes, i.e., βCD–PG complexes, with a host:guest ratio of 1:1 in the negative ion mode. This is the first study to report the ions of branched βCD–PG complexes using ESI-MS. The inclusion complexes were determined by a flow injection analysis using acetonitrile/water. We could confirm by this method the presence of a βCD–PGE₂ complex with a host:guest ratio of 1:1 in a solution-dissolved pharmaceutical formulation consisting of βCD–PGE₂ (Prostarmon^TM E tablet).     

Ruthenium(II) carbonyl complexes containing S-methylisothiosemicarbazone based tetradentate ligand: synthesis, characterization and biological applications

A series of hexa-coordinated ruthenium(II) complexes of the type [Ru(CO)(B)L ⁿ ] (n = 1–4; B = PPh₃, AsPh₃ or Py) have been synthesized by reacting dibasic quadridentate Schiff base ligands H₂L ⁿ (n = 1–4) with starting complexes [RuHCl(CO)(EPh₃)₂(B)] (E = P or As; B = PPh₃, AsPh₃ or Py). The synthesized complexes were characterized using elemental and various spectral studies including UV–Vis, FT-IR, NMR (¹H, ¹³C and ³¹P) and mass spectroscopy. An octahedral geometry was tentatively proposed for all the complexes based on the spectral data obtained. The experiments on antioxidant activity showed that the ruthenium(II) S-methylisothiosemicarbazone Schiff base complexes exhibited good scavenging activity against various free radicals (DPPH, OH and NO). The in vitro cytotoxicity of these complexes has been evaluated by MTT assay. The results demonstrate that the complexes have good anticancer activities against selected cancer cell line, human breast cancer cell line (MCF-7) and human skin carcinoma cell line (A431). The DNA cleavage studies showed that the complexes have better cleavage of pBR 322 DNA.     

Synthesis, structure and solution chemistry of dioxidovanadium(V) complexes with a family of hydrazone ligands. Evidence of formation of centrosymmetric dimers via H-bonds in the solid state

[V^IVO(acac)₂] reacts with the methanol solution of tridentate ONO donor hydrazone ligands (H₂L^1-4, general abbreviation H₂L; are derived from the condensation of benzoyl hydrazine with 2-hydroxyacetophenone and its 5-substituted derivatives) in presence of neutral monodentate alkyl amine bases having stronger basicity than pyridine e.g., ethylamine, diethylamine, triethylamine and piperidine (general abbreviation B) to produce BH⁺[VO₂L]⁻ (1-16) complexes. Five of these sixteen complexes are structurally characterized revealing that the vanadium is present in the anionic part of the molecule, [VO₂L]⁻ in a distorted square pyramidal environment. The complexes 5, 6, 15 and 16 containing two H-atoms associated with the amine-N atom in their cationic part (e.g., diethylammonium and piperidinium ion) are involved in H-bonding with a neighboring molecule resulting in the formation of centrosymmetric dimers while the complex 12 (containing only one hydrogen atom in the cationic part) exhibits normal H-bonding. The nature of the H-bonds in each of the four centrosymmetric dimeric complexes is different. These complexes have potential catalytic activity in the aerial oxidation of l-ascorbic acid and are converted into the [VO(L)(hq)] complexes containing VO³⁺ motif on reaction with equimolar amount of 8-hydroxyquinoline (Hhq) in methanol.     

Comparison of crystal field dependent and independent methods to analyse lanthanide induced NMR shifts in axially symmetric complexes. Part I. Systems with a C3 symmetry axis

A critical analysis of the lanthanide induced paramagnetic shift (LIS) data for several series of Ln³⁺ complexes of C₃ symmetry in terms of structural changes, crystal-field effects and/or variation of hyperfine constants along the lanthanide series was undertaken using a combination of the two-nuclei and three-nuclei techniques together with the classical one-nucleus technique. The crystal-field independent two-nuclei technique to study the isostructurality of a series of lanthanide complexes, is usefully complemented by the three nuclei shift ratio method, which is based exclusively on the experimental shift data, requiring no knowledge of B₀², 〈S_z〉 or C_j values. However, this later method cannot provide quantitative values for F_i and G_i. The combined use of the three methods was found to be a powerful analytical tool of the solution structure of lanthanide complexes. Isostructurality of whole series of complexes, either with no change of the F_i, G_i and B₀² parameters (L⁵ and L⁶), or with changes of the F_i and B₀² parameters (L⁷ and L⁸), is clearly defined by the combination of the two first methods. In these cases, the three-nuclei method sometimes fully supports such an isostructurality (L⁶, L⁸), but in other cases, due to the high structural sensitivity of its α and β parameters, it is able to detect small, unnoticed, structural changes in the complexes of L⁵ and L⁷. Clear structural changes, involving the F_i, G_i and B₀² parameters, are observed for the series of complexes of (L⁹), where the three methods agree, involving hydration and carboxylate coordination changes. More subtle structural changes, involving the internal dynamics of the bound ligands, are proposed in other cases (L¹-L⁴). These could also result from a magnification, by the present graphical analysis, of the breaks expected from the gradual structural changes along the series due to the lanthanide contraction.     

Nucleotide pyrophosphatase from yeast. The presence of bound zinc.

Nucleotide pyrophosphatase from yeast was inhibited by thiols, o-phenanthroline, 8-hydroxyquinoline, EDTA, and 8-hydroxyquinoline-5-sulfonic acid. The inhibition by chelating agents was time and concentration dependent. Inhibition by EDTA was decreased by complexing the EDTA with metal ions before addition to the enzyme. The effectiveness of the metal ions in preventing inhibition by EDTA paralleled the stability constants of the EDTA-metal complexes. Partial recovery of EDTA-inhibited enzyme activity was achieved with Zn²⁺, Co²⁺, Fe²⁺, and Mn²⁺. Analyses for zinc in the purified enzyme by atomic absorption spectroscopy and by titration with 8-hydroxyquinoline-5-sulfonic acid revealed the presence of approximately 1 g atom/mol of enzyme (M_r 65,000). The data indicate that yeast nucleotide pyrophosphatase is a metalloenzyme in which the zinc plays some role in activity.     

Solvent effects on intramolecular hydrophobic ligandligand interactions in binary and ternary complexes

The stability constants of mixed ligand complexes of the type M(Phen)(ACA)⁺, where M = Cu²⁺ or Zn²⁺, Phen = 1,10-phenanthroline and ACA^? = propionate, valerate and 2-cyclohexylacetate, were determined by potentiometric pH titration in 50% (v/v) dioxanewater and were compared with the stabilities of the corresponding ternary complexes formed with formate and acetate. The ternary complexes containing the alkanecar?ylates (ACA^?) are significantly more stable, due to intramolecular hydrophobic interactions between the alkyl residue of the ACAt¯ligands and the 1,10-phenanthroline molecule. For Zn(Phen)(valerate)⁺ this intramolecular ligand-ligand interaction was confirmed by¹H NMR shift measurements. The formation degree of the intramolecular adducts in the ternary Cu²⁺ and Zn²⁺ complexes was calculated and the position of the intramolecular equilibrium between the opened and closed isomer was determined: the closed isomer occurs between about 10 to 35 percent. Comparisons with related data show that the extent of this interaction is about the same in water and in 50% aqueous dioxane; this contrasts with the experience made with simple unbridged adducts, which are destabilized by the addition of dioxane (or other organic solvents). Furthermore, evaluation of the available stability data for the Cu²⁺/leucinate (Leu^?) system shows that addition of some dioxane to an aqueous solution (in which of the closed isomer exists to about 20%) favors the intramolecular interaction between the two isopropyl residues in Cu(Leu)₂ considerably: in 40 to 50% aqueous dioxane the formation degree of the closed isomer reaches about 80%. Higher concentrations of the organic solvent destabilize the hydrophobic interaction. The overall stability of Cu(Leu)⁺ and Cu(Leu)₂, as well of Cu(alaninate)⁺ and Cu(alaninate)₂, is governed by the polarity of the solvent while the extent of the intramolecular ligand-ligand interaction is influenced by the hydrophobic properties of the solvent molecules. Based on the stability data it is shown that intramolecular ligandligand interactions are quite a common feature for many binary and ternary amino acid complexes: e.g., M(norvalinate)₂, M(phenyl-alaninate)₂, M(tyrosinate)₂ [M = Co²⁺, Ni²⁺, Cu²⁺, Zn²⁺] or Cu(tyrptophanate)₂ and M(phenylalaninate)(norvalinate) or M(phenylalaninate)(tyrosinate) [M = Co²⁺, Ni²⁺, Cu²⁺]. In addition, evidence is presented that direct M²⁺-aromatic interactions are of no significance in these amino acid complexes in solution. The relevance of the present results with regard to biological systems is indicated.     

Uranium complexes of cyclic O,O-bidentate ligands with the P-N-P backbone

The formation of uranium complexes of novel ligands belonging to phosphorylated 2-oxo-1,2-azaphospholane series, namely 2-ethoxy-1-diethoxyphosphoryl-2-oxo-1,2λ⁵-azaphospholane (1a) and both individual R^∗,R^∗- and R^∗,S^∗-diastereomers of the related 2-oxo-2-phenyl-1,2λ⁵-azaphospholanes 1b,c with different surrounding at the exocyclic phosphorus atom, has been studied. The structures of the complexes of ML composition obtained in the reaction with uranyl nitrate in 1:1 ratio were found to depend on the difference in donor properties of the oxygen atom of endo- and exocyclic phosphoryl groups. The ligand 1a possessing the greater difference, serves as O-monodentate one with metal-oxygen bonding via the endocyclic PO function while both isomers of 1b,c coordinate to uranyl cation in a O,O-bidentate fashion. In solutions the ML complexes reacted with air oxygen to afford (μ₂-peroxo)-bridged uranium complexes [{UO₂(L)NO₃}₂(μ₂-O₂)] which structures were confirmed by X-ray crystallography data.     

Self-exchange rates and electron transfer kinetics of horse heart ferricytochrome C with amino acid-pentacyanoferrate(II) complexes

The electron transfer reactions of horse heart cytochrome c with a series of amino acid-pentacyanoferrate(II) complexes have been studied by the stopped-flow technique, at 25°C, μ = 0.100, pH 7 (phosphate buffer). A second-order behavior was observed in the case of the Fe(CN)₅ (histidine)^3? complex, with k = 2.8 x 10⁵ M^?1 sec^?1. For the Fe(CN)₅ (alanine)^4? and Fe(CN)₅(L-glutamate)^5? complexes, only a minor deviation of the second-order behavior, close to the experimental error (k = 3.2 × 10⁵ and 1.6 x 10⁵ M^?1 sec^?1, respectively) was noted at high concentrations of the reactants (e.g., 6 × 10^?4 M). The results are in accord with recent work on the Fe(CN)₆^4?/cytochrome c system demonstrating weak association of the reactants. The calculated self-exchange rate constants including electrostatic interactions for the imidazole,L -histidine, 4-aminopyridine, glycinate, β-alaninate, andL-glutamate pentacyanoferrate(II) complexes were 3.3 × 105, 3.3 × 10⁵, 2.8 × 10⁶,4.1 × 10²,5.5 × 10², and 6.0 M^?1 sec^?1, respectively. Marcus theory calculations for the cytochrome c reactions were interpreted in terms of two nonequivalent binding sites for the complexes, with the metalloprotein self-exchange rate constants varying from 10⁴ M^?1 sec^?1 (histidine, imidazole, and 4-aminopyridine complexes) to 10⁶ M^?1 sec ^?1 (glycinate, β-alaninate, and L-glutamate complexes).     

Tripodal amine catechol ligands: a fascinating class of chelators for aluminium(III)

Complexation constants based on potentiometric titrations and spectrophotometric measurements in an aqueous medium of 0.1 M KCl at 25 ± 1 °C for the complexes of Al(III) with multidentate tripodal polycatechol-amine ligands, cis,cis-1,3,5-tris[(2,3-dihydroxybenzylamino)aminomethyl]cyclohexane (TMACHCAT, L¹) and N¹,N³,N⁵-tris(2-(2,3-dihydroxybenzylamino)ethyl)cyclohexane-1,3,5-tricarboxamide (CYCOENCAT, L²) have been summarized in this paper. Both the ligands released six protons to form various monomeric complexes of the types AlLH₃, AlLH₂, AlLH and AlL (L = L¹ and L²). The first species AlLH₃ depicted at low pH for which a monocapped type geometry was suggested, where the ligands were coordinated through three catecholic oxygens at ortho. Other species are formed subsequently from the species AlLH₃ in steps upon deprotonation and coordination of the catecholic oxygens at meta to give encapsulated tris(catechol) type complexes. The probable structures of the metal complexes formed in solution were proposed through molecular modeling calculations. The pAl values calculated for AlL¹ and AlL² are appreciably higher than transferrin. The ligand L² showed higher affinity towards Al(III) than L¹ and desferrioxamine (DFO), the only approved drug for the treatment of aluminium intoxication.     

Toward charge-neutral ‘soft scorpionates’: Coordination chemistry and Lewis acid promoted isomerization of tris(1-organo-imidazol-2-ylthio)methanes

Two tris(1-organo-imidazol-2-ylthio)methanes, HC(S-tim^R)₃ (R = organo = methyl, tert-butyl), have been prepared by a triphasic reaction between chloroform, the appropriate heterocycle, and saturated aqueous solutions of Na₂CO₃, in the presence of a phase transfer agent, (NBu₄)(Br). These ligands have been characterized both spectroscopically and by single crystal X-ray diffraction. The reaction chemistry of these potentially N,N,N-tripodal ligands with AgBF₄ was also explored where simple 1:1 coordination complexes could be isolated from reactions performed in THF solution at room temperature. The derivative {Ag[HC(S-tim^Me)₃]}(BF₄) was structurally characterized which showed that the ligand binds in a μ-κ²N,κ¹N-mode to give a coordination polymer with an interesting layered supramolecular structure. Surprisingly, heating CH₃CN solutions of the silver complexes at reflux resulted in decomposition of the complex and concomitant isomerization of the ligands to give metal-free tris(3-organo-1-imidazole-2-thione)methane, HC(N-imt^R)₃; the heretofore elusive charge-neutral analogues of the well-studied ‘soft scorpionate’ Tm^R− anions. The solution isomerization of HC(S-tim^R)₃ to HC(N-imt^R)₃ was found to be general, occurring in a variety of solvents with any of a host of different Lewis acids [para-toluenesulfonic acid, KPF₆, and M(CO)₅Br (M = Mn, Re)] but did not occur by heating in the absence of Lewis acid. The compound HC(N-imt^Me)₃ exhibited unusually low solubility in common organic solvents. Single crystal X-ray diffraction of HC(N-imt^Me)₃ revealed a remarkable honeycomb supramolecular structure with ca. 5 Å channels filled with solvent. The robust nature of this solid is a result of strong dipolar stacking interactions of molecules into polymer chains bolstered by concerted π-π and CH-π interactions involving the heterocycles, holding the chains together in the remaining two dimensions.     

Electronic effects on the interactions of complexes [Ru(phen)2(p-L)] (L=MOPIP, HPIP, and NPIP) with DNA

In order to explore the electronic effects of Ru(II) complexes binding to DNA, a series of Ru(II) complexes [Ru(phen)₂ (p-MOPIP)]²⁺ (1), [Ru(phen)₂ (p-HPIP)]²⁺ (2), and [Ru(phen)₂(p-NPIP)]²⁺ (3) were synthesized and characterized by elementary, ¹H NMR, and ES-MS analysis. The binding properties of these complexes to CT-DNA were investigated with spectroscopic methods and viscosity experiments. Furthermore, the computations for these complexes applying the density functional theory (DFT) method have also been performed. The results show that all of these complexes can well bind to DNA in intercalation mode and DNA-binding affinity of these complexes is greatly influenced by electronic effects of intercalating ligands. The intrinsic binding constants for 1, 2, and 3 are 0.20, 0.69, and 1.56 × 10⁵ M⁻¹, respectively. This order is in accordance with that of the electron-withdrawing ability of substituent [-OR < -OH < -NO₂]. Such a trend in electronic effects of Ru(II) complexes binding to DNA can be reasonably explained by the DFT calculations.