Coral bleaching: the winners and the losers

Sea surface temperatures were warmer throughout 1998 at Sesoko Island, Japan, than in the 10 preceding years. Temperatures peaked at 2.8 °C above average, resulting in extensive coral bleaching and subsequent coral mortality. Using random quadrat surveys, we quantitatively documented the coral community structure one year before and one year after the bleaching event. The 1998 bleaching event reduced coral species richness by 61% and reduced coral cover by 85%. Colony morphology affected bleaching vulnerability and subsequent coral mortality. Finely branched corals were most susceptible, while massive and encrusting colonies survived. Most heavily impacted were the branched Acropora and pocilloporid corals, some of which showed local extinction. We suggest two hypotheses whose synergistic effect may partially explain observed mortality patterns (i.e. preferential survival of thick-tissued species, and shape-dependent differences in colony mass-transfer efficiency). A community-structural shift occurred on Okinawan reefs, resulting in an increase in the relative abundance of massive and encrusting coral species.     

Acidification effects on biofouling communities: winners and losers

How ocean acidification affects marine life is a major concern for science and society. However, its impacts on encrusting biofouling communities, that are both the initial colonizers of hard substrata and of great economic importance, are almost unknown. We showed that community composition changed significantly, from 92% spirorbids, 3% ascidians and 4% sponges initially to 47% spirorbids, 23% ascidians and 29% sponges after 100 days in acidified conditions (pH 7.7). In low pH, numbers of the spirorbid Neodexiospira pseudocorrugata were reduced ×5 compared to controls. The two ascidians present behaved differently with Aplidium sp. decreasing ×10 in pH 7.7, whereas Molgula sp. numbers were ×4 higher in low pH than controls. Calcareous sponge (Leucosolenia sp.) numbers increased ×2.5 in pH 7.7 over controls. The diatom and filamentous algal community was also more poorly developed in the low pH treatments compared to controls. Colonization of new surfaces likewise showed large decreases in spirorbid numbers, but numbers of sponges and Molgula sp. increased. Spirorbid losses appeared due to both recruitment failure and loss of existing tubes. Spirorbid tubes are comprised of a loose prismatic fabric of calcite crystals. Loss of tube materials appeared due to changes in the binding matrix and not crystal dissolution, as SEM analyses showed crystal surfaces were not pitted or dissolved in low pH conditions. Biofouling communities face dramatic future changes with reductions in groups with hard exposed exoskeletons and domination by soft‐bodied ascidians and sponges.     

Cryptic species and hidden ecological interactions of halictine bees along an elevational gradient

Changes of abiotic and biotic conditions along elevational gradients represent serious challenges to organisms which may promote the turnover of species, traits and biotic interaction partners. Here, we used molecular methods to study cuticular hydrocarbon (CHC) profiles, biotic interactions and phylogenetic relationships of halictid bees of the genus Lasioglossum along a 2,900 m elevational gradient at Mt. Kilimanjaro, Tanzania. We detected a strong species turnover of morphologically indistinguishable taxa with phylogenetically clustered cryptic species at high elevations, changes in CHC profiles, pollen resource diversity, and a turnover in the gut and body surface microbiome of bees. At high elevations, increased proportions of saturated compounds in CHC profiles indicate physiological adaptations to prevent desiccation. More specialized diets with higher proportions of low‐quality Asteraceae pollen imply constraints in the availability of food resources. Interactive effects of climatic conditions on gut and surface microbiomes, CHC profiles, and pollen diet suggest complex feedbacks among abiotic conditions, ecological interactions, physiological adaptations, and phylogenetic constraints as drivers of halictid bee communities at Mt. Kilimanjaro.     

Microbes and microplastics: Community shifts along an urban coastal contaminant gradient

Plastic substrates introduced to the environment during the Anthropocene have introduced new pathways for microbial selection and dispersal. Some plastic-colonising microorganisms have adapted phenotypes for plastic degradation (selection), while the spatial transport (dispersal) potential of plastic colonisers remains controlled by polymer-specific density, hydrography and currents. Plastic-degrading enzyme abundances have recently been correlated with concentrations of plastic debris in open ocean environments, making it critical to better understand colonisation of hydrocarbon degraders with plastic degradation potential in urbanised watersheds where plastic pollution often originates. We found that microbial colonisation by reputed hydrocarbon degraders on microplastics (MPs) correlated with a spatial contaminant gradient (New York City/Long Island waterways), polymer types, temporal scales, microbial domains and putative cell activity (DNA vs. RNA). Hydrocarbon-degrading taxa enriched on polyethylene and polyvinyl chloride substrates relative to other polymers and were more commonly recovered in samples proximal to New York City. These differences in MP colonisation could indicate phenotypic adaptation processes resulting from increased exposure to urban plastic runoff as well as differences in carbon bioavailability across polymer types. Shifts in MP community potential across urban coastal contaminant gradients and polymer types improve our understanding of environmental plastic discharge impacts toward biogeochemical cycling across the global ocean.     

Metal concentrations in urban riparian sediments along an urbanization gradient

Urbanization impacts fluvial systems via a combination of changes in sediment chemistry and basin hydrology. While chemical changes in urban soils have been well characterized, similar surveys of riparian sediments in urbanized areas are rare. Metal concentrations were measured in sediments collected from riparian areas across the urbanization gradient in Baltimore, MD. Average metal concentrations are similar to those observed in other regional studies. Two important spatial patterns are evident in the data. First, calcium concentrations double across the urbanization gradient, regardless of changes in underlying geochemistry at the boundary between the Eastern US Piedmont and Coastal Plain physiographic provinces. Alkali-earth metal ratios indicate that the additional Ca is very pure and possibly arises from cement common to urban systems. Second, hot spots of trace metals typically associated with urban systems (e.g., Cu, Zn, and Pb) occur in areas that have been artificially filled to create additional real estate in high land value areas. Together, these data indicate that riparian sediments exhibit unexpected patterns of metal contamination. If these sediments are remobilized, during events such as droughts or floods, this contamination may perpetuate legacy impacts to ecosystem health from a history of fluvial contamination.     

Climate change winners and losers among North American bumblebees

Mounting evidence suggests that climate change, agricultural intensification and disease are impacting bumblebee health and contributing to species’ declines. Identifying how these factors impact insect communities at large spatial and temporal scales is difficult, partly because species may respond in different ways. Further, the necessary data must span large spatial and temporal scales, which usually means they comprise aggregated, presence-only records collected using numerous methods (e.g. diversity surveys, educational collections, citizen-science projects, standardized ecological surveys). Here, we use occupancy models, which explicitly correct for biases in the species observation process, to quantify the effect of changes in temperature, precipitation and floral resources on bumblebee site occupancy over the past 12 decades in North America. We find no evidence of genus-wide declines in site occupancy, but do find that occupancy is strongly related to temperature, and is only weakly related to precipitation or floral resources. We also find that more species are likely to be climate change ‘losers’ than ‘winners’ and that this effect is primarily associated with changing temperature. Importantly, all trends were highly species-specific, highlighting that genus or community-wide measures may not reflect diverse species-specific patterns that are critical in guiding allocation of conservation resources.     

A balance of winners and losers in the Anthropocene

Scientists disagree about the nature of biodiversity change. While there is evidence for widespread declines from population surveys, assemblage surveys reveal a mix of declines and increases. These conflicting conclusions may be caused by the use of different metrics: assemblage metrics may average out drastic changes in individual populations. Alternatively, differences may arise from data sources: populations monitored individually, versus whole‐assemblage monitoring. To test these hypotheses, we estimated population change metrics using assemblage data. For a set of 23 241 populations, 16 009 species, in 158 assemblages, we detected significantly accelerating extinction and colonisation rates, with both rates being approximately balanced. Most populations (85%) did not show significant trends in abundance, and those that did were balanced between winners (8%) and losers (7%). Thus, population metrics estimated with assemblage data are commensurate with assemblage metrics and reveal sustained and increasing species turnover.     

Wild bees (Hymenoptera: Apoidea) in an urban botanical garden in Buenos Aires,Argentina

We assessed bee diversity and abundance in a botanical garden in the city of Buenos Aires during two consecutive spring–summer periods. Every 15 days, we collected by hand-netting bee specimens seen foraging on flowers during five-minute censuses at every entomophilous herbaceous plant. A total of 66 bee species (Hymenoptera: Apoidea) were recorded. Richness and abundance of native, generalist, and above-ground nesting (cavities) species were higher than that of exotic, specialist, and below-ground (soil) nesting ones, respectively. Social bees were more abundant, while the richness of solitary species was higher than that of social bees. Cleptoparasitic species were represented by a high number of species, even though only a few individuals were captured. Our results suggest that the studied area is an important bee reservoir within the city.     

Distribution and pollination services of wild bees and hoverflies along an altitudinal gradient in mountain hay meadows

Extensively managed and flower‐rich mountain hay meadows, hotspots of Europe''s biodiversity, are subject to environmental and climatic gradients linked to altitude. While the shift of pollinators from bee‐ to fly‐dominated communities with increasing elevation across vegetation zones is well established, the effect of highland altitudinal gradients on the community structure of pollinators within a specific habitat is poorly understood. We assessed wild bee and hoverfly communities, and their pollination service to three plant species common in mountain hay meadows, in eighteen extensively managed yellow oat grasslands (Trisetum flavescens) with an altitudinal gradient spanning approx. 300 m. Species richness and abundance of pollinators increased with elevation, but no shift between hoverflies and wild bees (mainly bumblebees) occurred. Seedset of the woodland cranesbill (Geranium sylvaticum) increased with hoverfly abundance, and seedset of the marsh thistle (Cirsium palustre) increased with wild bee abundance. Black rampion (Phyteuma nigrum) showed no significant response. The assignment of specific pollinator communities, and their response to altitude in highlands, to different plant species underlines the importance of wild bees and hoverflies as pollinators in extensive grassland systems.     

Seasonal variation of nitrification along a salinity gradient in an urban estuary

A review on salinity adaptation of marine molluscsbased on mainly Russian scientific literature ispresented. The existence of two relativelyindependent systems of adaptation to extreme(resistance level) and moderate (tolerance level)changes of environmental salinity was shown. Theresistance of molluscs is based mainly on an impededwater-salt exchange with the external medium due tomantle cavity hermetization. The tolerance ofmolluscs is determined by cellular mechanisms ofadaptation. Reversible changes of protein and RNAsynthesis, alteration of the pattern of multiplemolecular forms of different enzymes, and theregulation of ionic content and cell volume wereshown to be of importance for the above mentionedmechanisms. The efficiency of resistance andtolerance adaptations to salinity changes may varyin different species and in different colourphenotypes of the same species (intrapopulationalpolymorphism). Parasites (trematodes) may suppressthe resistance of the mollusc-host to extremesalinity changes without effecting the host'scapacity for adaptive changes in salinitytolerance.     

Leaf litter decomposition and macroinvertebrate assemblages along an urban stream gradient in Puerto Rico

Urbanization is a major land use form that has large impacts on ecosystems. Urban development in the watershed impacts stream ecosystems by increasing nutrient and organic matter loads, altering hydrology, and reducing biodiversity. Puerto Rico is an ideal location to assess and monitor the effects of urbanization on streams, because it is increasingly urbanized and streams do not receive inputs of untreated sewage, characteristic of many other tropical urban areas. The objective of this study was to determine how leaf litter decomposition and aquatic macroinvertebrate assemblages varied along a tropical urban gradient. We conducted the study in the Río Piedras watershed, San Juan Metropolitan Area, in six low‐order streams that formed an urban gradient ranging from 10% to 70% urban land cover. At each stream, we placed six 5 g leaf bags of Ficus longifolia in three different pools and collected one bag on each sampling date. Decomposition rates were fast in forested streams (range 0.021–0.039/day) and decreased with increasing urbanization (range 0.007–0.008/day). Rates were strongly and negatively correlated with percent impervious surface cover (R = 0.81, p = 0.01). Functional feeding group diversity was higher in forested streams, with the presence of shredders. Decomposition rates were significantly and positively correlated with functional feeding group diversity and abundance (R = 0.66, p = 0.04). Overall, our results show that urbanization affected the environment and macroinvertebrate diversity resulting in large negative effects on stream ecosystem function. Abstract in Spanish is available with online material.     

Environmental drivers of spider community composition at multiple scales along an urban gradient

Broad-scale modification of natural ecosystems associated with urbanisation often leads to localised extinctions and reduced species richness. Despite this, habitats within the urban matrix are still capable of supporting biodiversity to varying degrees. As species have different responses to anthropogenic habitat modification, the species composition of urban areas can depend greatly on the habitat characteristics of the local and surrounding areas. The aim of this study was to compare the community composition of spiders in private gardens, urban parks, patches of remnant vegetation and continuous bushland sites, so as to identify habitat variables associated with variation in spider populations along and within the urban gradient and matrix. Overall spider abundances and richness were highest in remnant vegetation patches and were associated with increased vegetation cover at microhabitat and landscape-scales. While gardens were not as diverse as remnant patches, they did support a surprisingly high diversity of spiders. We also found that species composition differed significantly between gardens and other urban green spaces. Higher richness within gardens was also associated with greater vegetation cover, indicating the importance of private management decisions on local biodiversity. Differences in community composition between land-use types were driven by a small number of urban-tolerant species, and spider guilds showed different responses to habitat traits such as vegetation cover and human population densities. This study demonstrates that urban land-uses support unique spider communities and that maintaining vegetation cover within the urban matrix is essential in order to support diverse spider communities in cities.     

More losers than winners: investigating Anthropocene defaunation through the diversity of population trends

The global-scale decline of animal biodiversity (‘defaunation’) represents one of the most alarming consequences of human impacts on the planet. The quantification of this extinction crisis has traditionally relied on the use of IUCN Red List conservation categories assigned to each assessed species. This approach reveals that a quarter of the world's animal species are currently threatened with extinction, and ~1% have been declared extinct. However, extinctions are preceded by progressive population declines through time that leave demographic ‘footprints’ that can alert us about the trajectories of species towards extinction. Therefore, an exclusive focus on IUCN conservation categories, without consideration of dynamic population trends, may underestimate the true extent of the processes of ongoing extinctions across nature. In fact, emerging evidence (e.g. the Living Planet Report), reveals a widespread tendency for sustained demographic declines (an average 69% decline in population abundances) of species globally. Yet, animal species are not only declining. Many species worldwide exhibit stable populations, while others are even thriving. Here, using population trend data for >71,000 animal species spanning all five groups of vertebrates (mammals, birds, reptiles, amphibians and fishes) and insects, we provide a comprehensive global-scale assessment of the diversity of population trends across species undergoing not only declines, but also population stability and increases. We show a widespread global erosion of species, with 48% undergoing declines, while 49% and 3% of species currently remain stable or are increasing, respectively. Geographically, we reveal an intriguing pattern similar to that of threatened species, whereby declines tend to concentrate around tropical regions, whereas stability and increases show a tendency to expand towards temperate climates. Importantly, we find that for species currently classed by the IUCN Red List as ‘non-threatened’, 33% are declining. Critically, in contrast with previous mass extinction events, our assessment shows that the Anthropocene extinction crisis is undergoing a rapid biodiversity imbalance, with levels of declines (a symptom of extinction) greatly exceeding levels of increases (a symptom of ecological expansion and potentially of evolution) for all groups. Our study contributes a further signal indicating that global biodiversity is entering a mass extinction, with ecosystem heterogeneity and functioning, biodiversity persistence, and human well-being under increasing threat.     

夏季南京市中心-郊区-城市森林梯度上的近地层大气特征

运用定点观测法和车载传感器的流动观测法,研究了夏季沿南京市市中心-郊区-城市森林梯度的近地层大气温度(T_(N-S))、CO_2浓度(p_(N-S)(CO_2))、湿度和污染气体浓度的变化规律.结果表明,沿市中心-郊区-城市森林梯度,T_(N-S)、p_(N-S)(CO_2)、相对湿度(RH_(N-S))和污染物浓度(p_(N-S)(SO_2)和p_(N-S)(NO_2))均表现为规律性的变化,与观测点距市中心的距离间的关系可用logistic方程进行较好的拟合(R~2在0.71～0.90之间).与城市森林(S9)相比,市中心(S1)的T_(N-S)和p_(N-S)(CO_2)在一天中的任何时段均有不同程度的升高,其中,T_(N-S)升高幅度在5:00～6:00时段最小,而在17:00～18:00时段最大,分别为1.3℃和4.7℃,白天和夜间平均分别升高了3.7℃和2.1℃;而p_(N-S)(CO_2)升高幅度在1:00～2:00时段最小,在13:00～14:00时段最大,分别为7.0μmol/mol和66μmol/mol,白天和夜间平均分别升高了55μmol/mol和20μmol/mol.S1和S9点间,绝对湿度(AH_(N-S))的全天平均值无显著差异;而RH_(N-S)除了5:00～6:00时段两点均接近饱和外,一天中S9点均高于S1点,两点最大差值出现在13:00～14:00时段,S1和S9分别为37.4%和52.9%,全天平均升高了7.0%.与S9点相比,S1点的p_(N-S)(SO_2)和p_(N-S)(NO_2)在上午10:00～11:40间分别升高了0.88倍和2.1倍.表明,当前城市的一些环境因子如T_(N-S)和p_(N-S)(CO_2)相当于全球数十年或更久以后的水平.     

Environmental DNA metabarcoding reveals winners and losers of global change in coastal waters

Studies of the ecological effects of global change often focus on one or a few species at a time. Consequently, we know relatively little about the changes underway at real-world scales of biological communities, which typically have hundreds or thousands of interacting species. Here, we use COI mtDNA amplicons from monthly samples of environmental DNA to survey 221 planktonic taxa along a gradient of temperature, salinity, dissolved oxygen and carbonate chemistry in nearshore marine habitat. The result is a high-resolution picture of changes in ecological communities using a technique replicable across a wide variety of ecosystems. We estimate community-level differences associated with time, space and environmental variables, and use these results to forecast near-term community changes due to warming and ocean acidification. We find distinct communities in warmer and more acidified conditions, with overall reduced richness in diatom assemblages and increased richness in dinoflagellates. Individual taxa finding more suitable habitat in near-future waters are more taxonomically varied and include the ubiquitous coccolithophore Emiliania huxleyi and the harmful dinoflagellate Alexandrium sp. These results suggest foundational changes for nearshore food webs under near-future conditions.     

The effects of changing climate on faunal depth distributions determine winners and losers

Changing climate is predicted to impact all depths of the global oceans, yet projections of range shifts in marine faunal distributions in response to changing climate seldom evaluate potential shifts in depth distribution. Marine ectotherms' thermal tolerance is limited by their ability to maintain aerobic metabolism (oxygen‐ and capacity‐limited tolerance), and is functionally associated with their hypoxia tolerance. Shallow‐water (<200 m depth) marine invertebrates and fishes demonstrate limited tolerance of increasing hydrostatic pressure (pressure exerted by the overlying mass of water), and hyperbaric (increased pressure) tolerance is proposed to depend on the ability to maintain aerobic metabolism, too. Here, we report significant correlation between the hypoxia thresholds and the hyperbaric thresholds of taxonomic groups of shallow‐water fauna, suggesting that pressure tolerance is indeed oxygen limited. Consequently, it appears that the combined effects of temperature, pressure and oxygen concentration constrain the fundamental ecological niches (FENs) of marine invertebrates and fishes. Including depth in a conceptual model of oxygen‐ and capacity‐limited FENs' responses to ocean warming and deoxygenation confirms previous predictions made based solely on consideration of the latitudinal effects of ocean warming (e.g. Cheung et al., 2009), that polar taxa are most vulnerable to the effects of climate change, with Arctic fauna experiencing the greatest FEN contraction. In contrast, the inclusion of depth in the conceptual model reveals for the first time that temperate fauna as well as tropical fauna may experience substantial FEN expansion with ocean warming and deoxygenation, rather than FEN maintenance or contraction suggested by solely considering latitudinal range shifts.     

Insect communities on experimental mugwort (Artemisia vulgaris L.) plots along an urban gradient

We studied the ability of insect herbivores and their natural enemies to colonize exposed, potted mugwort plants (Artemisia vulgaris L.) along a rural-urban gradient in 1994 in Hamburg (northern Germany). Ectophagous insects, leafmines and galls were monitored weekly from mid-May to mid-September. Endophagous insects were counted by harvesting and dissecting the stems at the end of the growing season. The rural-urban gradient was characterized by a gradient of vegetation-free areas and increasing proportion of ground covered in concrete, tarmac, paving and other impermeable surfaces surrounding the Artemisia plots, i.e. six different zones of increasing isolation. Numbers of insect species (herbivores, parasitoids and predators) decreased along the gradient from 43 to 12. Monophagous herbivores were not more affected than polyphagous herbivores, but parasitoids, especially rare species, were more strongly affected by isolation than predators. Some dominant herbivorous species were very successful colonizers and occurred in inner city sites devoid of all natural vegetation. Sometimes their abundance increased in the inner city to significantly higher densities than in the urban fringe. Isolation appeared to be the main reason for the observed patterns, since area and soil conditions were held constant in the experiment. Microclimate and pollution were considered to play a minor role. Received: 16 January 1997 / Accepted: 26 August 1997