Heptacoordinate dithiophosphate W(II) and Mo(II) complexes of diphosphines and iodide

New complexes [MI(CO)₂(dppe){S₂P(OEt)₂}] (M=W, 1a; M=Mo, 1b), [MI(CO)₂(dppm){S₂P(OEt)₂}] (M=W, 2a; M=Mo, 2b) and [W(CO)(dppe){S₂P(OEt)₂}₂][O₂dppe] (3a), were synthesised from [MI₂(CO)₃(NCMe)₂] (M=Mo, W), after treatment with ammonium diethyldithiophosphate and phosphine under different conditions. The structure of the tungsten complexes was determined by single crystal X-ray diffraction. During the synthesis of 3a, oxidation of the phosphine took place and a molecule of oxidised phosphine occupies channels in the crystal. DFT/B3LYP calculations on models of 1a and 2a showed the capped octahedron structure, observed in most dicarbonyl complexes of this family, to be preferred by 1.4 and 2.6 kcal mol⁻¹ for the dppm and the dppe complexes, respectively. Strong steric repulsions can reverse this trend, as happens with the rigid dppm ligand. Complex 1a adopts a pentagonal bipyramidal geometry, which is often found in related monocarbonyl complexes.     

First Principles Modeling of Dissociative Adsorption at Crystal Surfaces: Hydrogen on Pt(111)

Multiscale simulation has the potential of becoming the new modeling paradigm in chemical sciences. An important class of multiscale models involves the mapping of a finer scale model into an approximate surface that is used by a coarser scale model. As a specific example of this class we present the case of the adsorption dynamics of diatomic molecules on single crystal catalyst surfaces. The prototype system studied is the dissociative adsorption of H₂ on Pt(111). The finer scale model consists of density functional theory (DFT) periodic slab calculations that provide a small dataset for training an atomistic scale potential energy surface. The coarser scale model uses a semi-classical molecular dynamics (MD) algorithm to obtain the sticking coefficient as a function of the incident energy. Comparison to experimental data and published simulation work is presented. Finally, major challenges in multiscale modeling of chemical reactivity in coupled DFT/MD simulations are discussed, specifically the need for a systematic method of assessing the accuracy of the coarse graining process.     

Influence of Substratum Wettability on Attachment of Freshwater Bacteria to Solid Surfaces

We studied the attachment of a number of freshwater bacteria from River Sowe, Coventry, England, to test substrata. The attachment of each organism to hydrophobic and hydrophilic surfaces was evaluated, and further studies evaluated the attachment of selected isolates to a number of substrata with a range of water wettabilities. The wettability of each substratum was determined by contact angle measurements and was expressed as the work of adhesion (W_A). No generic pattern of attachment to the test surfaces was found, although the majority of the organisms isolated showed a preference for the hydrophobic surface. A more detailed study of selected isolates showed a relationship between W_A and number of attached cells. Each bacterium attached in maximum numbers to a surface that was characteristic of that organism and that had a W_A between 75 and 105 mJ m⁻².     

Relationship Between Wettability and Lubrication Characteristics of the Surfaces of Contacting Phospholipid-Based Membranes

The wettability of the articular surface of cartilage depends on the condition of its surface active phospholipid overlay, which is structured as multi-bilayer. Based on a hypothesis that the surface of cartilage facilitates the almost frictionless lubrication of the joint, we examined the characteristics of this membrane surface entity in both its normal and degenerated conditions using a combination of atomic force microscopy, contact angle measurement, and friction test methods. The observations have led to the conclusions that (1) the acid–base equilibrium condition influences the lubrication effectiveness of the surface of cartilage and (2) the friction coefficient is significantly dependent on the hydrophobicity of the surface of the tissue, thereby confirming the hypothesis tested in this paper. Both wettability angle and interfacial energy were obtained for varying conditions of the cartilage surface both in its wet, dry and lipid-depleted conditions. The interfacial energy also increased with mole fraction of the lipid species reaching an asymptotic value after 0.6. Also, the friction coefficient was found to decrease to an asymptotic level as the wettability angle increased. The result reveal that the interfacial energy increased with pH till pH = 4.0, and then decreased from pH = 4.0 to reach equilibrium at pH = 7.0.     

Multinuclear NMR study of the complexes of 6-phospho-D-gluconic acid with W(VI) and Mo(VI)

Multinuclear ((1)H, (13)C, (17)O, (31)P, (95)Mo, (183)W) magnetic resonance spectroscopy (1D and 2D) has been used to show that 6-phospho-d-gluconic acid forms three complexes with tungsten(VI) and six complexes with molybdenum(VI) in aqueous solution, depending on pH and concentration. Two isomeric 1:2 (metal-ligand) complexes are detected both with tungstate(VI) and molybdate(VI), having MO(2)(2+) centres and involving the carboxylate and the adjacent OH groups in addition to one 2:1 (metal-ligand) complex possessing a M(2)O(5)(2+) centre, with the ligand being coordinated by the carboxylate group and the three consecutive OH groups in positions 2, 3 and 4. Molybdate(VI) forms three additional species, which are not detected with tungstate. One of them is a 2:1 complex with a Mo(2)O(5)(2+) centre, with the ligand being tetradentate via O-3, O-4, O-5 and the phosphate group. The other two are 12:4 species, which can be seen as two 1:2 complexes bound together in a ring through two diphosphomolybdate moieties each derived from heptamolybdate by inclusion of two phosphate groups from the ligands.     

Mixed-ligand tris chelated complexes of Mo(IV) and W(IV): A comparative study

Two hitherto unknown mixed-ligand tris chelated complexes containing 2-aminothiophenolate, [Et₄N]₂[M^IV(NH-(C₆H₄)-S)(mnt)₂] (M = Mo, 1a; W, 2a) and two mixed-ligand tris chelate complex containing N,N-diethyldithiocarbamate, [Et₄N]₂[M^IV(Et₂NS₂)(mnt)₂] (M = Mo, 1b; W, 2b) have been synthesized and characterized structurally. Although these complexes are supposed to be quite similar to the well-known symmetric tris chelate complexes of maleonitriledithiolate (mnt), [Et₄N]₂[M^IV(mnt)₃] (M = Mo, 1c; W, 2c), but display both trigonal prismatic and distorted trigonal prismatic geometry in their crystal structure indicating the possibility of an equilibrium between these two structural possibilities in solution. Unlike extreme stability of 1b, 2b, 1c and 2c, both 1a and 2a are highly unstable in solution. In contrast to one reversible reduction in case of 1b and 2b, 1a and 2a exhibited no possible reduction up to −1.2 V and two sequential oxidation steps which have been further investigated with EPR study. Differences in stability and electrochemical behavior of 1a, 1b, 2a and 2b have been correlated with theoretical calculations at DFT level in comparison with long known 1c and 2c.     

Impact of C60 Adsorption on Surface Plasmon Polaritons on Self-Assembled Ag(111) Islands on Si(111)

The influence of C₆₀ adsorption on the properties of surface plasmon polaritons on small Ag islands is discussed. Under illumination with UV light as well as under illumination with femtosecond laser pulses, a decrease of the photoemission yield with increasing C₆₀ coverage is observed. With angular resolved measurements, changes of the band structure during deposition are studied. Based on these experiments, an increase of the work function with increasing coverage is measured. In two photon photoemission, the surface plasmons are imaged as a periodic moiré pattern, the wavelength of which changes because of a modified effective surface dielectric function. Our findings imply that the wavelength of the plasmon wave becomes shorter as a result. Finally, a decrease of the intensity of the moiré pattern maxima compared with the intensity of the first maximum with increasing C₆₀ coverage has been observed. Accordingly, the damping of the plasmon wave becomes stronger.     

Structure of the active site of sulfite oxidase. X-ray absorption spectroscopy of the Mo(IV), Mo(V), and Mo(VI) oxidation states

The active site of sulfite oxidase has been investigated by X-ray absorption spectroscopy at the molybdenum K-edge at 4 K. We have investigated all three accessible molybdenum oxidation states, Mo(IV), Mo(V), and Mo(VI), allowing comparison with the Mo(V) electron paramagnetic resonance data for the first time. Quantitative analysis of the extended X-ray absorption fine structure indicates that the Mo(VI) oxidation state possesses two terminal oxo (Mo = O) and approximately three thiolate-like (Mo-S-) ligands and is unaffected by changes in pH and chloride concentration. The Mo(IV) and Mo(V) oxidation states, however, each have a single oxo ligand plus one Mo-O- (or Mo-N less than) bond, most probably Mo--OH, and two to three thiolate-like ligands. Both reduced forms appear to gain a single chloride ligand under conditions of low pH and high chloride concentration.     

DFT modelling of hydrogen on Cu(110)- and (111)-type clusters

Density Functional Theory (DFT) calculations using gaussian 98 have been performed on hydrogen adsorbed on clusters representing the (110) and (111) surfaces of Cu. Clusters were constructed to model different adsorption sites, and at least two different size clusters were used for each site. On the (111) surface, hydrogen prefers to adsorb in a hollow site, though with the hcp variant being favoured by the adsorption energy, and the fcc alternative by the vibrational frequencies. On the (110) surface, the "fcc" site on a (1 2 2) reconstructed surface is preferred.     

Two-Dimensional Analogies to Frequency-Selective Surfaces (FSS) on the Graphene Sheet

In this paper, we propose that two-dimensional analogies to frequency-selective surfaces (FSS) can be achieved on graphene surfaces based on transformation optics. The analogies to representative FSS structures, including the anti-reflecting coating (ARC) and the high-reflecting coating (Bragg reflector), have been investigated through both analytical effective-index method (EIM)/transfer-matrix method (TMM) and numerical simulations. Both analytical and numerical solutions have shown that the propagation of plasmons on graphene surface with periodic chemical potentials can be an analogy to the interaction of incident light with traditional FSS multilayer dielectric media in which the transmission or reflection can be obtained by EIM/TMM. Combined with the tunability of graphene, the transmission or reflection of plasmons can be tuned by adjusting the bias voltage. The proposed structures and theoretical methods may provide new visions for achieving two-dimensional analogies to traditional structures on graphene.

     

Electronic absorption and MCD spectra for octacyanometallate complexes M(CN)8, M=Mo(IV), W(IV), n=4 and Mo(V), W(V), n=3

Electronic absorption and 8.0 T magnetic circular dichroism (MCD) spectra are reported for M(CN)₈ ⁴⁻, M=Mo(IV) and W(IV), in aqueous solution and M(CN)₈ ³⁻, M=Mo(V) and W(V), in acetonitrile solutions. In addition some absorption and MCD spectra are reported for the M(CN)₈ ³⁻ ions embedded in thin poly methyl methacrylate (PMMA) plastic films at temperatures from 295 to 10 K. The temperature dependence of the MCD spectra confirms the presence of C terms. The solution and PMMA spectra for the both Mo and W complexes in either the IV or V oxidation states are remarkably similar to each other for the same oxidation state and are interpreted within a D_2d structural framework for the isotropic environment. The weak bands below 3.0 μm⁻¹ (1 μm⁻¹=10⁴ cm⁻¹) for the M(IV) complexes are assigned as metal-localized ligand field (LF) transitions. LF transitions are also suggested for weaker unresolved absorption between 3.0 and 3.6 μm⁻¹ for the M(V) ions. The intense bands above 3.6 μm⁻¹ for M(IV) and 4.6 μm⁻¹ for M(V) complexes are interpreted as metal to ligand charge transfer (MLCT) from the metal b₁(x²−y²) HOMO to CN⁻-based π * orbitals. The prominent intense bands observed below 4.5 μm⁻¹for the M(V) complexes are assigned as ligand to metal charge transfer (LMCT) from occupied non-bonding or weakly π bonding CN⁻ orbitals to the half-filled b₁(x²−y²) HOMO.     

Synthesis, characterization and luminescence property of heterobimetallic trinuclear Mo(W)-Ag-S clusters containing 1,2-bis(diphenylphosphino)-1,2-dicarba-closo-dodecaborane

Reactions of (NH₄)₂MS₄ or (NH₄)₂MOS₃ (M = Mo, W) with AgSCN and closo carborane diphosphine ligand 1,2-(PPh₂)₂-1,2-C₂B₁₀H₁₀ (L) in CH₂Cl₂ yielded four heterobimetallic trinuclear Mo(W)-Ag-S clusters: [Ag₂MoS₄L₂] (1), [Ag₂WS₄L₂] (2), [Ag₂MoOS₃L₂] (3) and [Ag₂WS₄L₂] (4), respectively. All the new clusters have been characterized by elemental analysis, FT-IR, UV-Vis, ¹H and ¹³C NMR spectroscopy and their molecular structures (except for 3) were further confirmed by single-crystal X-ray diffraction. X-ray crystal structure analysis showed that the closo carborane diphosphine ligand was coordinated bidentately to Ag(I) atom through its two phosphorus atoms, resulting in a stable five-member chelating ring between the diphosphine ligand and the metal. The coordination sphere of the central M atom, as well as all the Ag atoms, was tetrahedron. The skeletons of these clusters could be classified into two types: with (NH₄)₂MS₄, the three metal atoms (two Ag atoms and one M atom) are in a linear conformation, while with (NH₄)₂MOS₃, the conformation of the heterobimetallic trinuclear cluster is butterfly shaped. The luminescence properties of the clusters were investigated in CH₂Cl₂ solution at room temperature and for the first time the butterfly-shaped Ag-W-S cluster containing the Ag₂WS₄ core has been proved to show luminescence property.     

Molecular-Dynamics Simulation of the Surface Diffusion of n-Alkanes on Pt(111)

Abstract

In the present study, the equilibrium adsorption and the dynamics of surface diffusion in a model of ethane and n-butane on a Pt(111) surface were simulated with molecular dynamics. At low temperatures, we found that both admolecules adsorb in a specific binding site. Through analysis of the trajectories, several features of the dynamics were resolved. At low temperature, we observed that diffusion occurs through a nearest-neighbor hopping mechanism involving both lateral rotation and axial translation. At high temperatures, the admolecule makes multiple-site hops and nonlocalized long flights. The temperature dependence of the diffusion coefficients was analyzed and was found to exhibit good Arrhenius behavior. The apparent diffusion coefficients follow trends seen in related experimental studies. In the case of ethane, a comparison between the diffusion barrier measured in the molecular-dynamics simulations and the theoretical barrier predicted by transition-state theory indicates that the simulated barrier is larger than the theoretical value. This finding is consistent with conclusions in recent studies of metal-atom diffusion on metal surfaces, where it was found that systems with low corrugation exhibit a non-unique relationship between the dynamical diffusion barrier and the potential-energy-surface topology.     

Identification of Li(+) binding sites and the effect of Li(+) treatment on phospholipid composition in human neuroblastoma cells: a (7)Li and (31)P NMR study

Li(+) binding in subcellular fractions of human neuroblastoma SH-SY 5 Y cells was investigated using (7)Li NMR spin-lattice (T(1)) and spin-spin (T(2)) relaxation measurements, as the T(1)/T(2) ratio is a sensitive parameter of Li(+) binding. The majority of Li(+) binding occurred in the plasma membrane, microsomes, and nuclear membrane fractions as demonstrated by the Li(+) binding constants and the values of the T(1)/T(2) ratios, which were drastically larger than those observed in the cytosol, nuclei, and mitochondria. We also investigated by (31)P NMR spectroscopy the effects of chronic Li(+) treatment for 4--6 weeks on the phospholipid composition of the plasma membrane and the cell homogenate and found that the levels of phosphatidylinositol and phosphatidylserine were significantly increased and decreased, respectively, in both fractions. From these observations, we propose that Li(+) binding occurs predominantly to membrane domains, and that chronic Li(+) treatment alters the phospholipid composition at these membrane sites. These findings support those from clinical studies that have indicated that Li(+) treatment of bipolar patients results in irregularities in Li(+) binding and phospholipid metabolism. Implications of our observations on putative mechanisms of Li(+) action, including the cell membrane abnormality, the inositol depletion and the G-protein hypotheses, are discussed.     

Comparative Study of the Action of Bovine Duodenal Proteinases (Duodenases) on Polypeptide Substrates

A comparative study of substrate specificity of bovine duodenal proteinases—chymotrypsin-like duodenase (ChlD) and dual-specificity duodenase (dsD)—was carried out using oligopeptide substrates (human proinsulin, glucagon, melittin, angiotensinogen fragment 1-14). ChlD displayed mainly chymotrypsin-like properties towards these substrates, hydrolyzing peptide bonds carboxy-terminally to bulky aliphatic or aromatic residues. In melittin, ChlD additionally cleaved peptide bonds after Thr and Ser residues. Dual-specificity duodenase (dsD) significantly restricted its specificity to only trypsin-like or only chymotrypsin-like or displayed full activity, combining both specificities, depending on substrate. Both ChlD and dsD efficiently hydrolyzed a single peptide bond (Phe8–His9) in angiotensinogen fragment 1-14. The kinetic parameters of angiotensinogen fragment 1-14 cleavage by ChlD and dsD were determined (k _cat/K _m = 80,500 M^-1·sec^-1 for ChlD and 103,000 M^-1·sec^-1 for dsD).     

湖南油樟的化学类型

对湖南省的油樟（Cinnamomum longepaniculatum (Gamble)N.Cho ex H.W.Li）资源作了调查。用色谱、色谱/质谱联用方法鉴定了油樟叶精油的43个化学成分,依主含成分不同可将其划分为6个不同的化学类型。其中,主含甲基丁香酚、龙脑、樟脑、芳樟醇和倍半萜烯的5个化学类型为首次在油樟中发现。     

黄樟油素新资源植物狭叶桂的研究

狭叶桂〔Ｃｉｎｎａｍｏｍｕｍｈｅｙｅａｎｕｍ（Ｎｅｅｓ）Ｈ．Ｗ．ＬｉｅｔＢ．Ｑ．Ｃｈｅｎｇ〕是一种新的资源植物,全株可提取芳香油,含黄樟油素６３％～９９％;鲜枝叶出油率为０．５１％～０．９６％,黄樟油素含量为９７％～９９％。用种子繁殖可保持母本优良性状,是一种具有发展价值的新香料植物     

Immobilization of oriented protein molecules on poly(ethylene glycol)-coated Si(111)

A high-density poly(ethylene glycol) (PEG)-coated Si(111) surface is used for the immobilization of polyhistidine-tagged protein molecules. This process features a number of properties that are highly desirable for protein microarray technology: (i) minimal nonspecific protein adsorption; (ii) highly uniform surface functionality; (iii) controlled protein orientation; and (iv) highly specific immobilization reaction without the need of protein purification. The high-density PEG-coated silicon surface is obtained from the reaction of a multi-arm PEG (mPEG) molecule with a chlorine terminated Si(111) surface to give a mPEG film with thickness of 5.2 nm. Four out of the eight arms on each immobilized mPEG molecule are accessible for linking to the chelating iminodiacetic acid (IDA) groups for the binding of Cu(2+) ions. The resulting Cu(2+)-IDA-mPEG-Si(111) surface is shown to specifically bind 6x histidine-tagged protein molecules, including green fluorescent protein (GFP) and sulfotransferase (ST), but otherwise retains its inertness towards nonspecific protein adsorption. We demonstrate a particular advantage of this strategy: the possibility of protein immobilization without the need of prepurification. Surface concentrations of relevant chemical species are quantitatively characterized at each reaction step by X-ray photoelectron spectroscopy (XPS). This kind of quantitative analysis is essential in tuning surface concentration and chemical environment for optimal sensitivity in probe-target interaction.     

Adsorption and decomposition mechanism of hexogen (RDX) on Al(111) surface by periodic DFT calculations

The adsorption of hexogen (RDX) molecule on the Al(111) surface was investigated by the generalized gradient approximation (GGA) of density functional theory (DFT). The calculations employ a supercell (4×4×3) slab model and three-dimensional periodic boundary conditions. The strong attractive forces between RDX molecule and aluminum atoms induce the N?O and N?N bond breaking of the RDX. Subsequently, the dissociated oxygen atoms, NO₂ group and radical fragment of RDX oxidize the Al surface. The largest adsorption energy is ?835.7 kJ mol^–1. We also investigated the adsorption and decomposition mechanism of RDX molecule on the Al(111) surface. The activation energy for the dissociation steps of V4 configuration is as large as 353.1 kJ mol^–1, while activation energies of other configurations are much smaller, in the range of 70.5–202.9 kJ mol^–1. The N?O is even easier than the N?NO₂ bond to decompose on the Al(111) surface.