Dynamics of Adaptation in Spatially Heterogeneous Metapopulations

The selection pressure experienced by organisms often varies across the species range. It is hence crucial to characterise the link between environmental spatial heterogeneity and the adaptive dynamics of species or populations. We address this issue by studying the phenotypic evolution of a spatial metapopulation using an adaptive dynamics approach. The singular strategy is found to be the mean of the optimal phenotypes in each habitat with larger weights for habitats present in large and well connected patches. The presence of spatial clusters of habitats in the metapopulation is found to facilitate specialisation and to increase both the level of adaptation and the evolutionary speed of the population when dispersal is limited. By showing that spatial structures are crucial in determining the specialisation level and the evolutionary speed of a population, our results give insight into the influence of spatial heterogeneity on the niche breadth of species.     

Seasonal Invasion Dynamics in a Spatially Heterogeneous River with Fluctuating Flows

A key problem in environmental flow assessment is the explicit linking of the flow regime with ecological dynamics. We present a hybrid modeling approach to couple hydrodynamic and biological processes, focusing on the combined impact of spatial heterogeneity and temporal variability on population dynamics. Studying periodically alternating pool-riffle rivers that are subjected to seasonally varying flows, we obtain an invasion ratchet mechanism. We analyze the ratchet process for a caricature model and a hybrid physical–biological model. The water depth and current are derived from a hydrodynamic equation for variable stream bed water flows and these quantities feed into a reaction-diffusion-advection model that governs population dynamics of a river species. We establish the existence of spreading speeds and the invasion ratchet phenomenon, using a mixture of mathematical approximations and numerical computations. Finally, we illustrate the invasion ratchet phenomenon in a spatially two-dimensional hydraulic simulation model of a meandering river structure. Our hybrid modeling approach strengthens the ecological component of stream hydraulics and allows us to gain a mechanistic understanding as to how flow patterns affect population survival.     

Transmission Dynamics of an SIS Model with Age Structure on Heterogeneous Networks

Infection age is often an important factor in epidemic dynamics. In order to realistically analyze the spreading mechanism and dynamical behavior of epidemic diseases, in this paper, a generalized disease transmission model of SIS type with age-dependent infection and birth and death on a heterogeneous network is discussed. The model allows the infection and recovery rates to vary and depend on the age of infection, the time since an individual becomes infected. We address uniform persistence and find that the model has the sharp threshold property, that is, for the basic reproduction number less than one, the disease-free equilibrium is globally asymptotically stable, while for the basic reproduction number is above one, a Lyapunov functional is used to show that the endemic equilibrium is globally stable. Finally, some numerical simulations are carried out to illustrate and complement the main results. The disease dynamics rely not only on the network structure, but also on an age-dependent factor (for some key functions concerned in the model).     

Oxytocinase in Plasma and Placenta in Normal and Prolonged Labour

In prolonged labour (dystocia) the level of activity of the enzyme oxytocinase is increased in the plasma and decreased in the placenta; the ratio of its activity in the placenta to that in plasma is less than half that found in normal labour. A possible explanation is that oxytocinase is derived mainly from the placenta and that during prolonged labour the enzyme escapes into the maternal blood stream.     

Plasma Lithography Surface Patterning for Creation of Cell Networks

Systematic manipulation of a cell microenvironment with micro- and nanoscale resolution is often required for deciphering various cellular and molecular phenomena. To address this requirement, we have developed a plasma lithography technique to manipulate the cellular microenvironment by creating a patterned surface with feature sizes ranging from 100 nm to millimeters. The goal of this technique is to be able to study, in a controlled way, the behaviors of individual cells as well as groups of cells and their interactions.This plasma lithography method is based on selective modification of the surface chemistry on a substrate by means of shielding the contact of low-temperature plasma with a physical mold. This selective shielding leaves a chemical pattern which can guide cell attachment and movement. This pattern, or surface template, can then be used to create networks of cells whose structure can mimic that found in nature and produces a controllable environment for experimental investigations. The technique is well suited to studying biological phenomenon as it produces stable surface patterns on transparent polymeric substrates in a biocompatible manner. The surface patterns last for weeks to months and can thus guide interaction with cells for long time periods which facilitates the study of long-term cellular processes, such as differentiation and adaption. The modification to the surface is primarily chemical in nature and thus does not introduce topographical or physical interference for interpretation of results. It also does not involve any harsh or toxic substances to achieve patterning and is compatible for tissue culture. Furthermore, it can be applied to modify various types of polymeric substrates, which due to the ability to tune their properties are ideal for and are widely used in biological applications. The resolution achievable is also beneficial, as isolation of specific processes such as migration, adhesion, or binding allows for discrete, clear observations at the single to multicell level.This method has been employed to form diverse networks of different cell types for investigations involving migration, signaling, tissue formation, and the behavior and interactions of neurons arraigned in a network.     

Inferring Diffusion Dynamics from FCS in Heterogeneous Nuclear Environments

Fluorescence correlation spectroscopy (FCS) is a noninvasive technique that probes the diffusion dynamics of proteins down to single-molecule sensitivity in living cells. Critical mechanistic insight is often drawn from FCS experiments by fitting the resulting time-intensity correlation function, G(t), to known diffusion models. When simple models fail, the complex diffusion dynamics of proteins within heterogeneous cellular environments can be fit to anomalous diffusion models with adjustable anomalous exponents. Here, we take a different approach. We use the maximum entropy method to show—first using synthetic data—that a model for proteins diffusing while stochastically binding/unbinding to various affinity sites in living cells gives rise to a G(t) that could otherwise be equally well fit using anomalous diffusion models. We explain the mechanistic insight derived from our method. In particular, using real FCS data, we describe how the effects of cell crowding and binding to affinity sites manifest themselves in the behavior of G(t). Our focus is on the diffusive behavior of an engineered protein in 1) the heterochromatin region of the cell’s nucleus as well as 2) in the cell’s cytoplasm and 3) in solution. The protein consists of the basic region-leucine zipper (BZip) domain of the CCAAT/enhancer-binding protein (C/EBP) fused to fluorescent proteins.     

Improved Recovery of Somatomedin Activity from Plasma by Prolonged Formic Acid Extraction

Recovery of somatomedin activity from plasma fractions was increased approximately 5-fold by prolonged extraction of isolates with formic acid. Extraction for 72 hours enhanced the yields of active peptides in the 6,000, 8,000 and >20,000 dalton range. Yields of smaller peptides were similar following short (2 hrs) and long (72 hrs) extraction periods. Active fractions obtained after prolonged extraction possessed sulfation activity and insulin-receptor affinity comparable to somatomedin isolated during short extraction with formic acid.     

Synchronization and Oscillatory Dynamics in Heterogeneous, Mutually Inhibited Neurons

We study some mechanisms responsible for synchronous oscillations and loss of synchrony at physiologically relevant frequencies (10–200 Hz) in a network of heterogeneous inhibitory neurons. We focus on the factors that determine the level of synchrony and frequency of the network response, as well as the effects of mild heterogeneity on network dynamics. With mild heterogeneity, synchrony is never perfect and is relatively fragile. In addition, the effects of inhibition are more complex in mildly heterogeneous networks than in homogeneous ones. In the former, synchrony is broken in two distinct ways, depending on the ratio of the synaptic decay time to the period of repetitive action potentials (_s/T), where T can be determined either from the network or from a single, self-inhibiting neuron. With _s/T > 2, corresponding to large applied current, small synaptic strength or large synaptic decay time, the effects of inhibition are largely tonic and heterogeneous neurons spike relatively independently. With _s/T < 1, synchrony breaks when faster cells begin to suppress their less excitable neighbors; cells that fire remain nearly synchronous. We show numerically that the behavior of mildly heterogeneous networks can be related to the behavior of single, self-inhibiting cells, which can be studied analytically.     

Patients with Prolonged Positivity of SARS-CoV-2 RNA Benefit from Convalescent Plasma Therapy: A Retrospective Study

Virologica Sinica - Convalescent plasma therapy has been implemented in a few cases of severe coronavirus disease 2019. No report about convalescent plasma therapy in treating patients with...     

Trypanosoma cruzi: Analysis of the Population Dynamics of Heterogeneous Mixtures1

Utilizing the previously reported inter-clonal differences in total DNA/organism, flow cytometry was used to analyze the population dynamics of Trypanosoma cruzi clone mixtures growing in liquid medium or vertebrate cells. The growth of clone mixtures in liquid medium can be described by unique parameters reflecting exponential growth rate (r), stationary phase population density (1/k), and the interaction between the clones (h). The relative numbers of each clone in the population change rapidly with time and the results arc in quantitative agreement with mathematical models of competitive population growth. The relationship between the parameters for T. cruzi is such that, in general, there is no dynamic equilibrium with coexistence of clones with different growth rates; under all culture protocols, the faster growing clone will prevail. A computer simulation of the vertebrate cell cycle of T. cruzi suggests that clone mixtures grow relatively independently; the basic attributes of the model were substantiated experimentally. Although wide fluctuations in the proportion of each clone released occurred, the faster growing clone again predominated. Finally, these results underline the importance of working with well-defined clones in the laboratory to avoid inconsistencies and paradoxical results and stress the importance of the rapid isolation of single cell clones from clinical specimens when studying the relationship of the parasite to human disease.     

Neuronal Plasma Membrane Dynamics Evoked by Osmomechanical Perturbations

When neurons swell and shrink they extensively reorganize their plasma membrane. A striking aspect of these membrane dynamics is the transient appearance of vacuole-like dilations (VLDs) which, counterintuitively, expand as the neurons shrink. Here, confocal microscopy of cultured molluscan (Lymnaea) neurons was used in conjunction with aqueous phase and membrane dyes to examine changing VLD membrane topology as VLDs form, reverse or recover. We show that VLDs start as discrete invaginations at the adherent surface, so VLD and plasma membranes are initially contiguous. Over the next few minutes VLDs expand and penetrate the cytoplasm. At the substratum, the mouths of VLDs develop into irregular annuli of motile adherent processes whereas deeper in the cytoplasm, VLD membrane profiles are smooth. Subsequently VLDs spontaneously shrink; as this recovery proceeds, constriction of the motile VLD mouth leads to the internalization of plasma membrane. Washout experiments with aqueous phase dyes demonstrated that VLD constriction yields bona fide vacuoles, i.e., membrane-bound compartments isolated from the external medium. VLDs can also be experimentally eliminated by returning cells to swelling conditions; this reversal process drives membrane back to the surface. VLD formation and reinternalization of VLD membrane can be seen as aspects of plasma membrane surface area regulation. We postulate that area adjustments, driven by regional membrane tension differences, become noticeable when excessive perturbations overload normal membrane reprocessing steps. Both the changes in VLD membrane topology, and previously established capacitance changes accompanying cell shrinking and swelling, argue that osmomechanically perturbed neurons regulate their surface area as their volume changes. Received: 13 May 1998/Revised: 18 September 1998     

Dynamics of Pulsed X-Ray Radiation of a Plasma Micropinch Discharge

Plasma Physics Reports - A complex of diagnostic equipment has been created and a measurement procedure has been developed for a multi-channel scintillation X-ray spectrometer with nanosecond time...     

Spatiotemporal Dynamics of Vole Populations in Heterogeneous Habitats of the Iremel' Mountain Range

Specific features of seasonal changes in the demographic structure and distribution of three vole species were studied in heterogeneous, qualitatively different habitats of three altitudinal belts in the Southern Ural. The results showed that the fauna of small mammals in the mountain–forest, subgoltsy, and mountain-tundra belts of the Iremel' Mountain Range could be regarded as metapopulations of the northern red–backed vole, large–toothed red–backed vole, and root vole, and the fauna of each belt could be regarded as micropopulations or local populations of the same species. Statistically significant differences in the population dynamics and demographic structure of voles inhabiting different biotopes were revealed.     

Plasma Approach to Describing the Electric Dynamics of a Neuron

The electric excitation of a neuron is interpreted as the formation of a nonlinear solitary ion acoustic wave of the charge density of sodium and hydrogen ions in an electrolytic intracellular fluid, which is treated as a dense plasma. It is shown that such a wave can be described by the coupled sine-Gordon and Korteweg-de Vries equations, having a solution in the form of a soliton whose internal vibrational structure is described by the Fermi-Pasta-Ulam spectrum. It is concluded that a nerve impulse can be interpreted as a low-frequency solitary wave of the charge density of sodium ions with a trapped high-frequency charge density wave of protons.     

Modeling the Dynamics of Populations in a Heterogeneous Environment: Invasion and Multistability

Biophysics - Abstract—We model the interaction of two populations based on evolutionary equations that consider diffusion, taxis, and logistic growth. Scenarios of biological invasion are...     

Multi-Scaled Grassland-Woody Plant Dynamics in the Heterogeneous Marl Prairies of the Southern Everglades

The Everglades freshwater marl prairie is a dynamic and spatially heterogeneous landscape, containing thousands of tree islands nested within a marsh matrix. Spatial processes underlie population and community dynamics across the mosaic, especially the balance between woody and graminoid components, and landscape patterns reflect interactions among multiple biotic and abiotic drivers. To better understand these complex, multi-scaled relationships we employed a three-tiered hierarchical design to investigate the effects of seed source, hydrology, and more indirectly fire on the establishment of new woody recruits in the marsh, and to assess current tree island patterning across the landscape. Our analyses were conducted at the ground level at two scales, which we term the micro- and meso-scapes, and results were related to remotely detected tree island distributions assessed in the broader landscape, that is, the macro-scape. Seed source and hydrologic effects on recruitment in the micro- and meso-scapes were analyzed via logistic regression, and spatial aggregation in the macro-scape was evaluated using a grid-based univariate O-ring function. Results varied among regions and scales but several general trends were observed. The patterning of adult populations was the strongest driver of recruitment in the micro- and meso-scape prairies, with recruits frequently aggregating around adults or tree islands. However in the macro-scape biologically associated (second order) aggregation was rare, suggesting that emergent woody patches are heavily controlled by underlying physical and environmental factors such as topography, hydrology, and fire.     

Comparison of Surgery and Prolonged Spironolactone Therapy in Patients with Hypertension,Aldosterone Excess,and Low Plasma Renin

The effect of prolonged preoperative treatment with spironolactone has been studied in a series of 67 patients with hypertension, aldosterone excess, and low plasma renin. In the series as a whole a highly significant reduction in both systolic and diastolic pressures was achieved, with no evidence of escape from control during therapy lasting several years in some cases. The drug was equally effective in controlling blood pressure in patients with and without adrenocortical adenomata. Occasional unresponsive patients were encountered in both groups; pretreatment blood urea levels in these were significantly higher than in the responsive patients. The hypotensive effect of spironolactone usually predicted the subsequent response to adrenal surgery.Spironolactone in all cases corrected plasma electrolyte abnormalities; significant increases in total exchangeable (or total body) potassium and significant reductions in total exchangeable sodium, total body water, extracellular fluid, and plasma volumes were seen. Plasma urea rose during treatment and there was a slight fall in mean body weight. Significant increases in peripheral venous plasma renin and angiotensin II concentrations occurred during treatment.In two patients no increase in aldosterone secretion rate was found during treatment, although plasma aldosterone rose in three of four subjects studied.Severe side effects were rare; in only two of the 67 patients did the drug have to be stopped.In addition to its routine preoperative use, spironolactone can now be advised as long-term therapy in selected patients.     

异质景观中非点源污染动态变化比较研究

通过在河北省遵化地区于水库的上游选取景观特征差异明显的4个典型流域,对地表水体采样分析,研究了非点源污染N（水溶性N）含量的季节动态变化特征以及与流域形状、景观空间分布格局的相互关系。结果表明：（1）平水（偏干,下同）年份不同季节地表水中非点源污染N含量高于干旱年份,反映出平水年份地表和地下径流对非点源污染的形成起到了较大作用。（2）干旱年份地表水中非点源污染N含量季节变化比较平稳,且空间变异较小,而平水年份地表水体中非点源污染N含量季节变化较大,表现出两种不同变化形式。（3）流域形状和景观类型的相对重要性与非点源污染N之间没有明显的相关关系,而“源”“汇”景观类型的空间分布格局在非点源污染的形成中起着重要作用。