Biological consequences of stream routing through a final-cut Strip mine pit: Benthic macroinvertebrates

Benthic macroinvertebrates were collected from the Plachek Pit, a final-cut coal strip mine pit at the Big Horn Mine near Sheridan, Wyoming, USA. Goose Creek was routed through the pit to allow mining under the original creek bed. The benthic community in the pit was dominated by the worm Limnodrilus hoffmeisteri and various midge genera, including Chironomus sp., Procladius sp. and Tanypus stellatus. Insects other than chironomids were minor components of the benthic fauna, and were collected only in the upstream portions of the pit; they were concluded to have originated from drift deposition. The pit functions as a sink for drifting macroinvertebrates. Based on community composition and supplemental water quality information it was concluded that the Plachek Pit best exemplified an organically-enriched, lake-like ecosystem. Overall, rerouting of Goose Creek through the Plachek Pit was not viewed as deleterious to Goose Creek, but rather benefited the creek by serving as a sink for inputs from upstream municipal and agricultural effluents.     

The effects of mine drainage and organic enrichment on benthos in the river nent system,Northern Pennines

A preliminary survey of the benthic fauna of sites on the Nent system affected by elevated zinc levels, acid water and organic enrichment is described. Data on faunal composition are presented for 17 sites. A clustering technique was applied to the taxa/site matrix to demonstrate the degree of association between sites varying in zinc concentration. Chandler biotic scores were found to be lowest at sites affected by high zinc levels and/or dense growths of the alga Stigeoclonium tenue. The role of elevated zinc levels and algal growth in determining the diversity and abundance of benthos is discussed.     

The impact of repeated insecticidal treatments on drift and benthos of a headwater stream

A small first-order, Appalachian Mountain stream received successive seasonal treatments with the insecticide, methoxychlor. Despite an application rate of 10 mg/1 methoxychlor for 4 hours, based on stream discharge, only a small fraction (1.6%) of the insecticide was exported to downstream reaches for a 31 h period during and following treatment. Most of the insecticide was incorporated into sediments of the streambed, which had residues ranging from 0.038 to 11.7 µg methoxychlor/g dry wt of sediments in June 1986 following treatments in December 1985 and March 1986. Despite low concentrations of methoxychlor measured in stream water (maximum = 128 µg/l) during the initial treatment, massive drift (> 950 000 organisms, and 70 g AFDM biomass) occurred from a stream area of about 144 m². Numerically, collector-gatherer taxa (primarily Chironomidae) dominated drift (63 %) followed by shredders and predators; however, biomass of drift was dominated by shredders (48.9%), followed by predators and collector-gatherers. Compared with pre-treatment benthic abundances, insects were reduced by 75% following the initial treatment in December 1985, and 85% following an additional treatment in March 1986. Benthic abundances of non-insect taxa showed no significant changes. Benthic abundances of shredder, collector-filterer, and scraper functional groups exhibited significant decreases in the first month following treatment. Although benthic abundances of collector-gatherer and predator taxa were reduced by 48.6 and 40.5%, respectively, the reduction was not statistically significant because of high-sample variance. Comparisons of drift composition during the initial treatment with successive quarterly treatments (March 1986 to January 1988) reflected of ongoing pesticide disturbance of the biota as the community structure shifted from one consisting of a diverse insect and non-insect fauna toward one dominated by copepods, oligochaetes, Collembola, and chironomids.     

A continuous study of the total drift of freshwater shrimps, Gammarus pulex, in a small stony stream in the English Lake District

1. The objective was to determine the major factors affecting the downstream dispersal (drift) of freshwater shrimps, Gammarus pulex. Sample replication and frequency are major problems in the quantification of drift. For the first time, these problems were avoided by sampling the whole stream continuously so that all the shrimps drifting downstream at the sampling point were caught in a net emptied at dusk and dawn in 1966, and every 3 days in 1967. 2. There was no consistent seasonal pattern in drift rates, but a high proportion of annual drift was taken in only a few samples. There was a nocturnal diel pattern of drift with peaks soon after dusk and just before dawn. A power function described the significant (P < 0.001) relationship between drift and flow, and was used to neutralise the dominant effects of flow by standardising total drift over 24 h, nocturnal drift and diurnal drift (drift per 50 m³). These were all significantly (P < 0.001) related to benthos density, but not to date, temperature, or length of the night or day. 3. The relationship between drift values and the independent variables, flow and benthos density, was well described (P < 0.001) by a multiple‐regression model. Adding temperature, date, and/or the length of the night or day did not improve model fit. Variations in flow and benthos density explained 94% of the variation in total drift over 24 h, 97% of the variation in nocturnal drift, but only 44% of the variation in diurnal drift. A power function described (P < 0.001) the relationship between total drift and the volume of water sampled over 3‐day periods in 1967. Flow explained 95% of this drift variation; it was unnecessary to add another variable such as benthos density. 4. The significance of this study is that it avoided the problems associated with the quantification of drift samples. Therefore, the conclusions are more robust than those of many previous studies. A high proportion of the annual drift losses would have been undetected by intermittent sampling. Temperature, season, night or day length had no significant effect on drift densities, and the relationship between drift and benthos densities was proportional, not density dependent. The nocturnal increase in drift could not be interpreted as an antipredator behaviour. The dominance of flow and benthos density was apparent but the quantitative relationships posed further questions, especially those related to drift distances at different velocities.     

The drift distances and time spent in the drift by freshwater shrimps, Gammarus pulex, in a small stony stream, and their implications for the interpretation of downstream dispersal

1. The objectives were (i) to determine experimentally and to model the relationship between mean water velocity and both the mean distance travelled, and the mean time spent, in the drift by freshwater shrimps, Gammarus pulex; (ii) to develop a drift distance–water velocity model from the experimental study, and validate it with field data; (iii) to examine the relationship between drift rate, water velocity and benthic density with the latter expressed as a mean value for the whole stream and a mean value corrected for the distance travelled in the drift. 2. In field experiments at 10 water velocities (0.032–0.962 m s^?1), the significant relationship between the mean drift distance and mean water velocity was described both by a power function (power, 0.96) and a linear relationship. The mean drift time was fairly constant at 8.3 s (95% CL ± 0.4). A simple model estimated the drift distance and time spent in the drift by different percentages of the drifting invertebrates. This model predicted correctly the positive relationship between drift rate and water velocity for field data over a year. 3. The relationship between drift rate per hour and the independent variables, water velocity and benthic density, was well described by a multiple‐regression model. Adding temperature and date did not improve model fit. Variations in water velocity and benthic density explained 96% of the variation in nocturnal drift rate (65% to velocity, 31% to benthic density), but only 40% of the variation in diurnal drift rate (29% to velocity, 11% to benthic density). Correcting benthic density for the drift distances did not improve model fit. 4. The significance of this study is that it developed models to predict drift distances and time, values being similar to those obtained in another, larger stream. It also illustrated the importance of spatial scale in the interpretation of drift by showing that when drift distances were taken into account, the impact of drift on the population was higher (4–10% lost day^?1) than when drift distances were ignored (usually < 3% lost day^?1), especially at a local level.     

Aquatic insect faunas and communities of a mountain stream in Sapa Highland,northern Vietnam

Aquatic insect communities were investigated from the Muonghoa Stream in the Sapa Highland (highest peak 3,143 m), a subtropical mountain stream in northern Vietnam. Field investigations for quantitative (Surber net 50 cm × 50 cm, mesh size 0.2 mm, riffle and pool/run) and qualitative (hand net, mesh size 1 mm) sampling were conducted at nine sites along the watercourse between 27 November and 2 December 2005. As a result, a total of 216 species (the majority of them undescribed) belonging to 139 genera, 61 families, and nine orders were recognized: 53 Ephemeroptera species (24.5%), nine Odonata species (4.2%), 15 Plecoptera species (6.9%), seven Hemiptera species (3.2%), 35 Coleoptera species (16.2%), one Megaloptera species (0.5%), 29 Diptera species (13.4%), 66 Trichoptera species (30.6%), and one Lepidoptera species (0.5%). Trichoptera, Ephemeroptera, and Coleoptera represented the major aquatic insect groups with regard to taxonomic and individual richness, whereas Hemiptera and Odonata were relatively less diverse and abundant than in studies of other tropical Southeast Asian streams. The dominance, richness, and diversity indices (H′) fell within the following ranges [mean ± standard deviation (SD)]: 0.18–0.76 (0.42 ± 0.19), 4.13–9.19 (7.06 ± 1.45), and 1.61–3.22 (2.67 ± 0.55), respectively. Riffle habitats generally yielded numbers of aquatic insect species and individuals approximately twice that sampled in pool/run habitats. Shredders were relatively larger in proportion within the headwater reach, whereas scrapers and collector-gatherers were more abundant in the middle and lower stream reaches. This functional feeding group composition is characteristic of temperate streams in East Asia. The results of detrended correspondence analysis and Bray–Curtis cluster analysis indicated that aquatic insect compositions at the sampling sites were very reflective of the reach characteristics, which evidence gradual changes with altitude and stream order along the stream watercourse. This is the first comprehensive investigation of aquatic insects in highland Southeast Asian regions.     

Aquatic insect diversity in a tropical Vietnamese stream in comparison with that in a temperate Korean stream

A comparative investigation on aquatic insect diversity was conducted in a tropical stream in Southeast Asia (the Dak Pri stream in southern Vietnam; stream orders II–V, two sites per stream order) with a reference temperate stream in Northeast Asia (the Gapyeong stream in central Korea) in March 2001 and April 2000, respectively. The numbers of aquatic insect taxa in Dak Pri stream (268 species, mostly undescribed, 230 genera, 91 families, and 9 orders; 110.5 ± 17.1 species per site) were about twice those in Gapyeong stream (133 species, 98 genera, 51 families, and 8 orders; 60.3 ± 8.5 species per site). Coleoptera, Trichoptera, Ephemeroptera, and Diptera were the major aquatic insect orders with high taxonomic richness, and Coleoptera, Odonata, and Hemiptera contributed to the higher degree of aquatic insect diversity in Dak Pri stream. The species diversity indices of Dak Pri stream (4.37 ± 0.19) were higher than those of Gapyeong stream (3.73 ± 0.42), whereas the dominance indices of Dak Pri stream (0.195 ± 0.046) were lower than those of Gapyeong stream (0.346 ± 0.113). Collector-gatherers were predominant in both streams; shredders were more abundant in Dak Pri stream while scrapers were more abundant in Gapyeong stream. Factors affecting the higher degree of aquatic insect diversity in Dak Pri stream are discussed.     

The aquatic insects of a standard small plain river in NE France,with emphasis on remarkable species

A five-year macroinvertebrate study was conducted on a 55 km river (le Rupt-de-Mad, Lorraine region, north-eastern France), a standard for the region. A list of 300 species was drawn up, and remarkable species were listed for some better known orders: Ephemeroptera, Plecoptera, Trichoptera and Odonata. Some faunistic results are emphasised: about 42% of the identified species were more or less ubiquitous, 26% were meso- to polysaprobic species of potamon, present only in the main course of the river, while 31% were rather stenoecious species restricted to certain tributaries. Fifty-one remarkable species were listed, taking into account their regional status, according to IUCN categories: more than three quarters were hosted in the small tributaries, and 55% found exclusively in these latter (versus 23.5% only present in the main course of the river). Calcareous lotic tributaries were hosting particularly original communities with many remarkable species. Ephemeroptera, Plecoptera and Trichoptera were pertinent groups to assess the global faunistic interest of lotic habitats, but lentic habitats are probably better evaluated using other groups, e.g. Odonata and Coleoptera; the latter unfortunately poorly known from an ecological point of view.     

A Dietary Assessment of Selenium Risk to Aquatic Birds on a Coal Mine Affected Stream in Alberta,Canada

Selenium is a trace element of concern in the McLeod River basin downstream from two recently-closed coal mines in west-central Alberta, Canada. Aquatic birds breed on streams in the area and may be exposed to excessive amounts of selenium through their diets. In this article, we present the results of a dietary-based assessment of the risk that selenium may pose to two aquatic bird species, the American Dipper (Cinclus mexicanus) and the Harlequin Duck (Histrionicus histrionicus), on one of the coal mine–affected streams, the Gregg River. The study consisted of (1) a literature-based toxicity assessment, (2) simulation of selenium exposure in the diets and eggs of the two species, and (3) a risk assessment that coupled information on toxicity and exposure. Diet and egg selenium concentrations associated with a 20% hatch failure rate were 6.4 and 17 μ g · g^?1 dry wt, respectively. Simulated dietary selenium concentrations were about 2.0–2.5 μ g · g^?1 higher on the Gregg River than on reference streams for both species. Simulated predicted egg concentrations averaged 2.0 and 1.4 μ g · g^?1 higher on the Gregg River than on reference streams for American Dippers and Harlequin Ducks, respectively. When simulated dietary concentrations were considered, hatch failure rates on the Gregg River were predicted to average 12% higher in American Dippers and 8% higher in Harlequin Ducks than at reference streams. Corresponding values were only 3% for both species when predicted egg concentrations were used. Elevated levels of selenium in insects in some of the reference streams were unexpected and raised a question as to whether aquatic birds have evolved a higher tolerance level for dietary selenium in these areas.     

Dynamics of a subtropical plankton community,with emphasis on the copepod Mesocyclops edax

The zooplankton community of a subtropical, eutrophic lake was studied over an annual cycle. Mesocyclops edax, the numerically dominant crustacean, exhibited a stationary age distribution for most of the year (July–March). Per capita growth rates (r) of M. edax approximated zero throughout most of the study, indicating a close correspondence between birth and death rates. High death rates in the spring and summer probably were due to intense predation, since physiological mortality was low and predators were abundant. Multiple regression analyses indicated that much of the variation in M. edax birth rates could be explained by abundance of their animal prey. Other plankton in this lake exhibited considerable seasonality, but not to the marked degree characteristic of temperate populations. The number of zooplankton species was low and cladocerans were scarce, as is characteristic of many eutrophic Florida Lakes.     

Effects of root herbivory by an insect on a foliar-feeding species,mediated through changes in the host plant

Summary The effects of root herbivory by larvae of the scarabaeid, Phyllopertha horticola, on the growth of Capsella bursa-pastoris were examined. Individuals of Aphis fabae were reared on the leaves to determine what effect, if any, root feeding has on the performance of this insect. The experiment was conducted under two watering regimes (low and high). Low watering and root feeding caused water stress in the plants and this was reflected in a reduction in vegetative biomass and an increase in the proportion of material allocated to reproduction. Supplying plants with ample water in the high treatment enabled the water stress caused by root herbivory to be offset, but not completely overcome. Low watering and root feeding caused an increase in aphid weight and growth rate, while root feeding also increased fecundity and adult longevity. These effects are attributed to an improvement in food quality, measured by total soluble nitrogen, and caused by amino acid mobilization due to the water stress. The implications of these results in agricultural and ecological situations are discussed.     

Seasonal variations of diatoms and dinoflagellates in a shallow,temperate estuary,with emphasis on neritic assemblages

Seasonal changes in the diatom and dinoflagellate assemblages were examined in the neritic zone of the Urdaibai estuary (north Spain) with regard to some major physical and chemical variables during an annual cycle. A total of 81 diatoms and 38 dinoflagellates were identified and quantified during the study period. Both groups displayed a distinctive pattern of seasonal succession. The seasonal distribution of the Shannon index showed a trend of increasing values from the upper estuary to the lower neritic segment. The diatom diversity maxima were observed in February, April and September, and dinoflagellate maxima in April–May, July and October. Diatoms dominated the assemblages, reaching 1×10⁶ cells l^–1 from April to September. A shift from large diatoms and dinoflagellates to small bloom-forming taxa was observed during winter–early spring. A spring diatom bloom composed of Rhizosolenia spp. was observed in April, while small chain-forming taxa (chiefly Chaetoceros spp.) dominated from June to September. Cell maxima for both groups in late summer were produced by the diatoms Chaetoceros salsugineum and Skeletonema costatum, and by the dinoflagellates Heterocapsa pygmaea and Peridinium quinquecorne. Silicate availability by river supply and strong tidal-mixing of the water column seem to determine the year-round dominance of diatoms over dinoflagellates.     

Nucleic acids in ichthyoplankton ecology: a review, with emphasis on recent advances for new perspectives

Nucleic acid assessments and especially the RNA/DNA ratio are used widely as indices of growth rate or nutritional condition of larval fish. Methodological aspects are considered with the aim of defining a most reliable analytical procedure. Laboratory calibrations can give conflicting results, but general and common features may be drawn from a global examination. A high variability of RNA content, and thus RNA/DNA ratio, was revealed by estimates at the individual level and seems to be more related to feeding condition in late larval or juvenile stages than in yolk-sac and first-feeding larvae. An alternative is suggested, based on the relative DNA content which appears more stable and sensitive to starvation during these early stages. The consistency of such a pattern is strongly supported by findings about regulation of ribosomal RNA content of tissues, and especially white muscle, by nutrition. Determination of a threshold founded on a simple observation of morphological development stages is proposed as a base to define the best way to assess the larval nutritional condition. Some field applications are reviewed briefly. Finally an appraisal of the advantages and drawbacks of the different nucleic acid-based indices is attempted, which permits delineation of some prospects for future research.     

NMR studies on fully hydrated membrane proteins, with emphasis on bacteriorhodopsin as a typical and prototype membrane protein

The 3D structures or dynamic feature of fully hydrated membrane proteins are very important at ambient temperature, in relation to understanding their biological activities, although their data, especially from the flexible portions such as surface regions, are unavailable from X-ray diffraction or cryoelectron microscope at low temperature. In contrast, high-resolution solid-state NMR spectroscopy has proved to be a very convenient alternative means to be able to reveal their dynamic structures. To clarify this problem, we describe here how we are able to reveal such structures and dynamic features, based on intrinsic probes from high-resolution solid-state NMR studies on bacteriorhodopsin (bR) as a typical membrane protein in 2D crystal, regenerated preparation in lipid bilayer and detergents. It turned out that their dynamic features are substantially altered upon their environments where bR is present. We further review NMR applications to study structure and dynamics of a variety of membrane proteins, including sensory rhodopsin, rhodopsin, photoreaction centers, diacylglycerol kinases, etc.     

Distribution patterns of interstitial freshwater meiofauna over a range of spatial scales,with emphasis on alluvial river-aquifer systems

Spatial distribution patterns of the interstitial meiobenthos are examined across a range of scales. A global interstitial highway model is presented with the alluvial aquifer system as its central core. Spatially discontinuous hypogean entities, such as karstic aquifers, springs, anchialine waters and the psammolittoral, have limited interconnections except through the alluvial aquifer system and are contiguous with epigean waters. The global interstitial highway is viewed as an evolutionary pathway and long-term dispersal route for meiobenthic forms. The distribution of interstitial animals in alluvial river-aquifer systems is examined at longitudinal (altitudinal), reach, floodplain, gravel bar, and vertical (depth) scales. Geomorphic and hydrogeologic features and interactions emerge as major determinants of the spatially heterogeneous nature of alluvial aquifers that structure the patchy distribution patterns of hypogean fauna across a range of scales.Invited summary of Symposium on the Biogeography of Subterranean Crustaceans: the Effects of Different Scales. Prepared for print by D. C. Culver.Invited summary of Symposium on the Biogeography of Subterranean Crustaceans: the Effects of Different Scales. Prepared for print by D. C. Culver.     

Molecular phylogeny of the Herpestidae (Mammalia, Carnivora) with a special emphasis on the Asian Herpestes

Until now, phylogenetic studies of the mongooses (Carnivora, Herpestidae) have not included an exhaustive sampling of the Asian members of this family. In this study, we used mitochondrial (Cytochrome b and ND2), nuclear (β-fibrinogen intron 7 and Transthyretin intron 1) sequences from almost all of the recognized mongoose species to produce a well-resolved phylogeny of the Herpestidae. We also performed molecular dating analyses to infer divergence dates of the different lineages within the Herpestidae. Our results confirmed the paraphyly of the Herpestes genus and other phylogenetic relationships, which previously had only been moderately supported. The Asian herpestid species were found to form a monophyletic group within the Herpestidae. Within the Asian species, a cyto-nuclear conflict was discovered between the small Indian mongoose (Herpestes auropunctatus), the Indian gray mongoose (Herpestes edwardsii) and the Javan mongoose (Herpestes javanicus), which may have occurred through interspecific hybridization. This study inferred an Early Miocene origin for the Herpestidae and a Middle Miocene origin for the Asian mongooses.     

Experiments on the physiology of southern and northern krill, Euphausia superba and Meganyctiphanes norvegica, with emphasis on moult and growth - a review

Physiological data are needed for life history studies on krill, and as parameters for input into energy budgets and models. In conjunction with moult and growth data, these may also prove useful for assessing the fishable biomass of krill. Here, the development of physiological concepts in experimental krill research is briefly evaluated, with emphasis on the gaps to be filled. Krill growth is very flexible, as well as strongly temperature and nutrition dependent. The polar Antarctic krill Euphausia superba grows as fast as the boreal species Meganyctiphanes norvegica, at least during the first 2.5 years, and the species are comparable in terms of physiological plasticity. Accordingly, as krill appear to adjust quickly to specific laboratory conditions, short-term experiments are essential if field conditions are to be reflected as closely as possible. Furthermore, direct comparisons between laboratory experiments and swarming studies in the field are advantageous. For these, M. norvegica is particularly well-suited, as swarms can be followed over longer times and more easily than in E. superba. For example, processes of moult and reproduction were found to be highly coordinated in swarms and populations of Northern krill. For this species a conceptual model of reproduction was developed based on a combination of short-term laboratory observations coupled with field data on moult and ovary stages. In further physiological experiments krill should be studied as groups when swarming. Using proxies, that is applying physiological and/or biochemical methods side by side, is a promising way to enhance the reliability of life history data.     

Description of a new Brazilian species of Mycodrosophila (Diptera,Drosophilidae) with emphasis on the morphology of phallic sclerites

Mycodrosophila is a cosmopolitan genus of Drosophilidae that comprises approximately 130 species with mycophagous habitats. In this study, we described a new species of Mycodrosophila based on morphological traits and included details of the male terminalia. The holotype is from Eugênio Lefévre, locality in Campos do Jordão municipality, SP, Brazil, located in the Atlantic rainforest biome and was sampled in the 1930s.     

The fine structure of the midgut epithelium in a centipede,Scolopendra cingulata (Chilopoda,Scolopendridae), with the special emphasis on epithelial regeneration

Scolopendra cingulata has a tube-shaped digestive system that is divided into three distinct regions: fore-, mid- and hindgut. The midgut is lined with a pseudostratified columnar epithelium which is composed of digestive, secretory and regenerative cells. Hemocytes also appear between the digestive cells of the midgut epithelium. The ultrastructure of three types of epithelial cells and hemocytes of the midgut has been described with the special emphasis on the role of regenerative cells in the protection of midgut epithelium. The process of midgut epithelium regeneration proceeds due to the ability of regenerative cells to proliferate and differentiate according to a circadian rhythm. The regenerative cells serve as unipotent stem cells that divide in an asymmetric manner.Additionally, two types of hemocytes have been distinguished among midgut epithelial cells. They enter the midgut epithelium from the body cavity. Because of the fact that numerous microorganisms occur in the cytoplasm of midgut epithelial cells, we discuss the role of hemocytes in elimination of pathogens from the midgut epithelium. The studies were conducted with the use of transmission electron microscope and immunofluorescent methods.