10,000 years in isolation? Honeybees (<Emphasis Type="Italic">Apis mellifera</Emphasis>) in Saharan oases

After the transition from a savannah to a desert about 10,000 years ago the isolated Saharan oases offer a unique case for studying the effect of population fragmentation and isolation over a period of many thousand years. We use the honeybee, Apis mellifera, as a test system because they are an abundant wild species in the African dry savannahs but are particularly sensitive to drift and bottlenecks in small isolated populations due to the small effective size resulting from male haploidy, the sex determination system and sociality. We compared the non-fragmented coastal population with the oases of Brak and Kufra using 15 polymorphic microsatellite loci assessing the mating frequency, colony density, gene diversity, and population differentiation. We found that the honeybee population of the remote oasis of Kufra is well isolated whereas those of the oasis of Brak and the coastal regions show genetic foot prints of introgression by commercial beekeeping. The isolated Kufra population showed no indications of inbreeding suggesting that the endemic population size is sufficient to ensure sustainable local survival.     

Yearly variation in polygyny in the termite <Emphasis Type="Italic">Macrotermes michaelseni</Emphasis> (Sjöstedt)

Summary Macrotermes michaelseni, an abundant termite species in semi-arid ecosystems of eastern Africa, exhibits considerable fluctuations in the proportion of polygynous colonies across years (between 5 and 50%). We found a negative correlation between rainfall and the proportion of polygynous colonies with a time lag of two years. A decrease in the percentage of polygynous colonies was particularly obvious in 1999 and 2000, two years after an El Niño-event. Rainfall and subsequent primary production seem to influence the degree of polygyny. Variation in the proportion of polygynous colonies could be due to several mutually non-exclusive factors, including better survival of polygynous colonies during years with low resource availability and increased aggression between nestmate queens with decreasing resource availability. Evaluating several lines of circumstantial evidence we suggest that the degree of polygyny depends on ecological factors.Received 11 July 2003; revised 14 October and 3 February 2004; accepted 9 March 2004.     

Effects of phenol in antioxidant metabolism in matrinxã, Brycon amazonicus (Teleostei; Characidae)

Parameters of the antioxidant defense systems of Brycon amazonicus (matrinx?--a neotropical fish) exposed to phenol for 96 h plus the recovery over 1 and 2 weeks were studied in erythrocytes and liver. Hematocrit increase was observed during phenol exposure and recovery for 1 week. Total superoxide dismutases (SOD), glutathione peroxidase (GPx) and reduced glutathione (GSH) did not change during phenol exposure. Erythrocyte glucose-6-phosphate dehydrogenase (G6PDH) increased during that period while catalase (CAT) activity decreased during phenol exposure and recovery for 2 weeks. In the liver, SOD and CAT did not change, whereas GPx increased in the first week of recovery and decreased after 2 weeks. A late response was observed for G6PDH activity which increased only at the second week. Ascorbate concentration in the brain decreased during phenol exposure and increased over recovery. From our results it appears that the oxidative stress was limited in matrinx? exposed to phenol, but seemed to occur during the recovery period.     

Tribute in memory of Jacques Breton (1942–2018)

Photosynthesis Research - Jacques Breton spent his 39&nbsp;years of professional life at Saclay, a center of the French Atomic Energy Commission. He studied photosynthesis with various advanced...     

Can browsing by deer in winter induce defence responses in bilberry (<Emphasis Type="Italic">Vaccinium myrtillus</Emphasis>)?

Wild ungulates are key determinants in shaping boreal plant communities, and may also affect ecosystem function through inducing the plant defence systems of key plant species. We examined whether winter browsing by deer could increase the resistance of bilberry (Vaccinium myrtillus). We used three indicators of induced bilberry defence: reduced growth (a), reduced reproduction (b) and decreased insect herbivory (c) in focal plants. In a field experiment, using a randomised block design, we exposed half of plants twice in winter to exogenously applied methyl jasmonate (MeJA) and crossed this factor with randomly selecting browsed and unbrowsed plants. We predicted that MeJA-plants would have significant lower growth, reproduction and insect herbivory than Control plants. We also expected that Browsed plants would experience similar negative effects and that there would be an interaction between MeJa and Browsed indicating a possible additive effect. Growth, flowering and insect herbivory were significantly lower in MeJA than in Control, as expected. We did not find the same reduction for Browsed and no significant interaction between factors. The combined treatment, unexpectedly, flowered more and showed higher levels of insect herbivory than MeJA. Our study showed that defence responses of bilberry may be induced by exogenously-applied MeJA in winter. Our study could not confirm whether winter browsing by deer can induce the same defence responses.     

Analysis of <Emphasis Type="Italic">GJB6</Emphasis> (Сx30) and <Emphasis Type="Italic">GJB3</Emphasis> (Сx31) genes in deaf patients with monoallelic mutations in <Emphasis Type="Italic">GJB2</Emphasis> (Сx26) gene in the Sakha Republic (Yakutia)

Тhe DNA testing of autosomal recessive deafness type 1A (DFNB1A, MIM 220290) is complicated when deaf patients have only monoallelic (heterozygous) recessive mutations in the GJB2 (Сх26) gene that is uninformative for establishment of diagnosis. Such patients may be “random” heterozygous carriers of GJB2 mutations as well as have the mutant allele in a cis-regulatory region of GJB2 gene, in element genes encoding other connexins: GJB6 (Сх30) or GJB3 (Сх31). Previous studies of genetic causes of hearing loss in patients from Yakutia were directed to search for only mutations in the GJB2 gene, and the DNA diagnostics was uninformative for 9.7% (38/393) of the patients with monoallelic GJB2 mutations. In this work the search for mutations in genes GJB3 and GJB6 and two deletions с.del(GJB6-D13S1830) and с.del(GJB6-D13S1854) to the cis-regulatory region of GJB2 gene was conducted in 35 patients with GJB2 monoallelic mutations and in 104 normal hearing individuals. The genes studied are two synonymous substitution c.489G>A (р.Leu163Leu) (GJB6) and c.357C>T (р.Asn119Asn) (GJB3) have been found, probably do not have clinical significance, and two nonsynonymous substitution c.301G>A (p.Glu101Lys) (GJB6) and с.580G>A (p.Ala194Thr) (GJB3). Additional experimental evidences are needed for confirmation of pathogenic significance of detected nonsynonymous substitutions in development of hearing loss in studied patients. Diagnosis of the DFNB1A was confirmed in only one patient, who was discovered by the deletion с.del(GJB6-D13S1830) (GJB2) in combination with a recessive mutation с.35delG (GJB2). In general, our results indicate low contribution of mutations in genes GJB6 and GJB3 in hearing loss etiology in Yakutia.     

Hydrogen peroxide (H<Subscript>2</Subscript>O<Subscript>2</Subscript>) and methyl-β-cyclodextrin (MβCD) down regulate caveolin expression in human lens epithelial cells (HLECs)

Oxidative stimulation induced by hydrogen peroxide (H₂O₂) on human lens epithelial cells (HLECs) was performed to observe the effects on cell viability and caveolin expression, and cholesterol depletion in HLECs caused by methyl-β-cyclodextrin (MβCD) was also studied. SRA01/04 HLECs were exposed to H₂O₂ or MβDC of various concentrations and durations. We used a 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay to measure the effect of H₂O₂ on the viability of SRA01/04 HLECs. The distributions of caveolins after oxidative stimulation were probed by fluorescence microscopy and laser scanning confocal microscopy. Immunoblotting was performed to analyze alterations of caveolins expression. We observed that the viability of SRA01/04 HLECs under 0.1 mM H₂O₂ for 10 min or longer was significantly reduced (*p < 0.05, F = 11.63). Laser scanning microscopy showed immunofluorescent caveolins in SRA01/04 HLECs under 0.1 mM H₂O₂ for 10 min or longer; caveolins were largely confined to intracellular domains. Western blots showing both membrane and total caveolin protein (22 kDa) levels in SRA01/04 HLECs treated with 0.1, 0.2, 0.5, or 1.0 mM H₂O₂ for 30 min were significantly reduced, compared with the untreated (*p < 0.05, F = 6.149, or *p < 0.05, F = 14.489, respectively). In addition, the membrane and total caveolin protein level after being treated with 0.1 mM H₂O₂ (*p < 0.05, F = 6.843, or *p < 0.05, F = 7.944, respectively) for different durations also down regulated. Fluorescence microscopy also showed that phosphorylated caveolin-1 was distributed near the focal adhesions of the cells. This study concludes that the responses of HLECs to oxidative stress may include down regulation of caveolin and phosphorylation of caveolin-1 on tyrosine 14 and that MβCD also down regulates caveolin while depleting cholesterol in HLECs. Published in Russian in Molekulyarnaya Biologiya, 2007, Vol. 41, No. 6, pp. 994–1001. The article was submitted by the authors in English.     

Improved accuracy in measuring one-bond and two-bond <Superscript>15</Superscript>N,<Superscript>13</Superscript>C<Superscript>α</Superscript> coupling constants in proteins by double-inphase/antiphase (DIPAP) spectroscopy

An extension to HN(CO-α/β-N,C^α-J)-TROSY (Permi and Annila in J Biomol NMR 16:221–227, 2000) is proposed that permits the simultaneous determination of the four coupling constants ¹ J _{N′(i)Cα(i)}, ² J _HN(i)Cα(i), ² J _{Cα(i−1)N′(i)}, and ³ J _{Cα(i−1)HN(i)} in ¹⁵N,¹³C-labeled proteins. Contrasting the original scheme, in which two separate subspectra exhibit the ² J _CαN′ coupling as inphase and antiphase splitting (IPAP), we here record four subspectra that exhibit all combinations of inphase and antiphase splittings possible with respect to both ² J _CαN′ and ¹ J _N′Cα (DIPAP). Complementary sign patterns in the different spectrum constituents overdetermine the coupling constants which can thus be extracted at higher accuracy than is possible with the original experiment. Fully exploiting data redundance, simultaneous 2D lineshape fitting of the E.COSY multiplet tilts in all four subspectra provides all coupling constants at ultimate precision. Cross-correlation and differential-relaxation effects were taken into account in the evaluation procedure. By applying a four-point Fourier transform, the set of spectra is reversibly interconverted between DIPAP and spin-state representations. Methods are exemplified using proteins of various size.     

Altitudinal variation in ant–aphid mutualism in nitrogen transfer of oak (<Emphasis Type="Italic">Quercus liaotungensis</Emphasis>)

Ant–plant relationship is a model for the study of the ecology and evolution of interspecific interactions. In direct ant–plant mutualism (i.e., plants providing food or nesting places for ants, and ants protecting the plants in return) ants provide nutrients to plants. However, whether a similar mechanism exists in indirect ant–plant mutualism (i.e., an ant–aphid–plant system) remains unknown. In this work, we used the ¹⁵N stable isotope method to study altitudinal variations in the roles of ants in the nutrient transfer of oak (Quercus liaotungensis). Our work shows that ants deliver nitrogen in indirect ant–plant interactions, and that the effect of nutrient transfer differed significantly with altitude. Ants’ trophic level at high altitudes was significantly lower than that at low altitudes, indicating that the degree of ant–aphid mutualism was greater at high altitudes, which may be beneficial in nitrogen transfer. Our work suggests that ant–aphid mutualism might be context dependent, such that it affects nutrient transfer in the food web, and that this context dependency is an important factor that influences altitudinal variation in nutrient transfer.     

Micronutrient optimization results into highly improved in vitro plant regeneration in kodo (<Emphasis Type="Italic">Paspalum scrobiculatum</Emphasis> L.) and finger (<Emphasis Type="Italic">Eleusine coracana</Emphasis> (L.) Gaertn.) millets

Basal medium constituents and their concentration play an important role in growth and morphogenesis of plant tissues cultured in vitro. In this study effect of different inorganic nutrients (CoCl₂, MnSO₄, ZnSO₄, CuSO₄ and AgNO₃) on callus induction and plant regeneration in Paspalum scrobiculatum and Eleusine coracana was examined. A 5× and 3× increase in regeneration response at enhanced levels of CuSO₄ was noted for kodo and finger millets, respectively. Significant improvement in plant regeneration was also observed with the increase in levels of Co and Mn. Addition of AgNO₃ to the basal medium also had a stimulatory effect on callus induction and plant regeneration. Optimization of nutrient level in the basal medium has highly significant role in obtaining maximum regeneration response from explants and callus culture.     

Molecular pharming — VLPs made in plants

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Dynamics in the microbial cytome — single cell analytics in natural systems

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Characteristics of photosynthesis in maize leaves (С<Subscript>4</Subscript> plants) upon changes in the level of illuminance and nitrate nutrition

We studied assimilation of ¹⁴СО₂ and distribution of ¹⁴С among the products of 3-min-long photosynthesis of maize (Zea mays L.) leaves. The day before the experiment, half of the plants were fertilized with Ca(NO₃)₂ (1 g/L of water) at a rate of 6 L/m². Five days before the experiment, some plants were shaded for adaptation (illuminance was reduced by 50%). On the day of the experiment (before the application of ¹⁴СО₂), several shaded plants were exposed to direct sunlight for 3 min, and some plants grown at full light (light plants) were shaded for 3 min (illuminance of 50%). Unfertilized plants adapted for 5 days to shading showed photosynthesis of 75.9% of control level (full light). If light plants were transferred to shading for 3 min, their photosynthesis decreased to 42.1%. In plants shaded for 5 days and then transferred to full light, photosynthesis in 3 min was 96.3% of control level. At full light, fertilization with nitrate boosted photosynthesis to 132.6% as compared with control material, but photosynthesis decreased to 43.5 and 65.4% of control level in plants shaded for 5 days and those shaded for 3 min, respectively. At the same time, the plants shaded for 5 days and then exposed for 3 min to full light restored photosynthesis to almost control level (95.5%). Analysis of ¹⁴С distribution among the products of 3-min-long photosynthesis showed that, the same as in C₃ plants, a decrease in illuminance (especially a sudden one) in maize reduced the ratio between labeled sucrose and hexoses and elevates incorporation of ¹⁴С into malate, which indicated that its consumption in bundle sheath cells was suppressed. A decrease in the ratio between labeled sucrose and hexoses became more pronounced under the influence of nitrates with this effect also occurring in transport products of photosynthesis (20 cm below ¹⁴С-providing leaf area). In plants fertilized with nitrates, radioactivity of sucrose (% of radioactivity of soluble compounds) decreased in all the types of illumination. When illuminance was suddenly reduced for 3 min, incorporation of ¹⁴С into sucrose was 21.5 against 51.2% in light plants, and radioactivity of aspartate and malate sharply rose to 13.7 and 26.1% (against 2.1 and 8.9% in control material). Incorporation of ¹⁴С into compounds of glycolate pathway was low (less than 2.5%), but it was somewhat greater in nitrate plants. We concluded that the same mechanism of interaction between stomatal apparatus of leaf epidermis, invertase of mesophyll apoplast, and photosynthetic metabolism of carbon with electron flux via electron transport chain in chloroplasts of bundle sheath cells, which governs the rate of photosynthesis and assimilate export from the leaf but is triggered by the extent of consumption in the bundle sheath cells of C₄ acids produced in the mesophyll operates in C₄ plants (the same as in C₃ plants).     

CST-II’s recognition domain for acceptor substrates in α-(2→8)-sialylations

CST-II is a bacterial sialyltransferase known for its ability to perform α-(2→8)-sialylations using GM₃ related trisaccharide substrates. Previously, we probed the enzyme’s substrate specificity and developed an efficient synthesis for α-(2→8)-oligosialosides, and we suggested that CST-II could have a very small substrate recognition domain. Here we report our full studies on CST-II’s recognition feature for acceptor substrates. The current study further demonstrates the versatility of CST-II in preparing complex oligosaccharides that contain α-(2→8)-oligosialyl moieties.     

Mitochondria-targeted antioxidant SkQ1 (10-(6′-plastoquinonyl)decyltriphenylphosphonium bromide) inhibits mast cell degranulation <Emphasis Type="Italic">in vivo</Emphasis> and <Emphasis Type="Italic">in vitro</Emphasis>

The therapeutic effect of mitochondria-targeted antioxidant 10-(6′-plastoquinonyl)decyltriphenylphosphonium bromide (SkQ1) in experimental models of acute inflammation and wound repair has been shown earlier. It was suggested that the antiinflammatory activity of SkQ1 is related to its ability to suppress inflammatory activation of the vascular endothelium and neutrophil migration into tissues. Here, we demonstrated that SkQ1 inhibits activation of mast cells (MCs) followed by their degranulation and histamine release in vivo and in vitro. Intraperitoneal injections of SkQ1 in the mouse air-pouch model reduced the number of leukocytes in the air-pouch cavity and significantly decreased the histamine content in it, as well as suppressing MC degranulation in the air-pouch tissue. The direct effect of SkQ1 on MCs was studied in vitro in the rat basophilic leukemia RBL-2H3 cell line. SkQ1 inhibited induced degranulation of RBL-2H3 cells. These results suggest that mitochondrial reactive oxygen species are involved in the activation of MCs. It is known that MCs play a crucial role in regulation of vascular permeability by secreting histamine. Suppression of MC degranulation by SkQ1 might be a significant factor in the antiinflammatory activity of this mitochondria-targeted antioxidant.     

Radical disinfestation protocol eliminates in vitro contamination in Guava (<Emphasis Type="Italic">Psidium guajava </Emphasis>L.) seeds

Controlling contamination in vitro is one of the basic requirements for successful tissue culture technology. In preliminary studies, in vitro contamination of guava seeds was almost 100%, even when disinfested with bleach. To overcome this problem, we developed a unique method to control contamination using bleach and strong acids. Submerging guava seeds in 10% HCl for 24–72 h followed by a 30 min treatment with 10% bleach (NaOCl) reduced contamination rates from 98 to 0%. Substituting 5% H₂SO₄ for 12 h for 10% HCL gave similar results. In addition to eliminating contamination, acid-treated seeds germinated faster in vitro than control seeds germinated in a greenhouse (15 vs. 40 days, respectively).     

Sex-driven differences in Egyptian mongoose’s (<Emphasis Type="Italic">Herpestes ichneumon</Emphasis>) diet in its northwestern European range

Sexual dimorphism in carnivores can result from, or induce, variations in diet and foraging behaviour between individuals of different sexes. Sex-driven behavioural changes in feeding habits may also result in a reduction in intraspecific competition for resources, avoiding dietary overlap by concentrating on different prey sizes/types. We therefore evaluated the variation in feeding habits of both males and females of an invasive and range expanding southern European carnivore, the Egyptian mongoose (Herpestes ichneumon), through gut content analysis of road or predator-control killed animals. The analysis of 59 gut samples, collected in Portugal, revealed that northwestern populations of mongooses prey mostly upon mammals [especially lagomorphs, percentage of biomass (PB) = 44%], reptiles (PB = 28%) and arthropods (PB = 2% but percentage of occurrence = 35%). However, females seem to focus mainly on reptiles (PB = 51%) and mammals (PB = 38%), whilst males consume mostly mammals (PB = 75%). The results suggest that this variation maybe a result of sexual dimorphism (since some variation is documented in a few Egyptian mongoose’s skull measures, namely condylobasal length and canine diameter), with males shifting their diets to prey from which they can obtain more energy. Females seem to be focused on predating lighter animals, probably females or juveniles, a fact that has important game management implications.