Predicting the distribution of <Emphasis Type="Italic">Encephalartos latifrons</Emphasis>, a critically endangered cycad in South Africa

This study evaluates how a modelling approach to determine areas of suitable habitat for the Critically Endangered Albany cycad Encephalartos latifrons can assist in systematic conservation planning for this and other rare and threatened cycads. A map distinguishing suitable from unsuitable habitat for E. latifrons was produced and important environmental predictors (climate, geology, topography and vegetation) influencing the suitable habitat were estimated. The maximum entropy (MaxEnt) modelling technique was chosen for this study as it has consistently performed well compared with alternative modelling methods and is also an appropriate model choice when the sample size is small and locality records are relatively few. Predicted habitat suitability showed that some locations chosen for translocation and restoration of E. latifrons specimens are not suitable. This revealed that modelling suitable habitat can guide relocation and regeneration of E. latifrons and perhaps other threatened cycads with restricted distributions and few locality records. The species distribution model constructed for E. latifrons is the first reported habitat model for a Critically Endangered cycad in South Africa. The results may be incorporated into conservation planning and structured decision-making about translocations and restoration programmes involving vulnerable cycads, which are among the most threatened organisms globally.     

New records of the rare North American endemic <Emphasis Type="Italic">Chara brittonii</Emphasis> (Characeae), with comments on its distribution

Characeae is a family of freshwater green algal macrophytes found on every continent except Antarctica. Although some species are thought to be cosmopolitan, others appear to be restricted to relatively small geographic areas. Chara brittonii is a North American endemic previously reported from eight scattered populations in Indiana, Michigan, New Jersey, and Ohio. Given that few extant populations were known, basic questions about its distribution, habitat preference, morphology, and phylogenetic placement remained unanswered. We have surveyed every reported locality for C. brittonii except the New Jersey locality, because the collection details are vague, and also surveyed numerous additional waterbodies in Indiana, Michigan, and Wisconsin. We have found extant populations in nine localities in three states. These include one newly reported site in Indiana and five newly reported sites in Wisconsin, the first known populations in that state. Chara brittonii seems to have been extirpated from several historical sites in recent decades. We expanded both the range and the number of known extant populations for C. brittonii and hypothesize that C. brittonii may be more widespread in the Midwest than previously thought. Factors contributing to the actual and apparent rarity of this species are discussed including its preferred habitat and small size. We observed that the number of antheridial scute cells of C. brittonii varied from 4–8 with both triangular and elongate scutes produced on the same thallus, an unusual condition for the family. Phylogenetic analyses using three plastid-encoded markers placed C. brittonii among a paraphyletic grade of C. foliolosa sensu lato strains in the monophyletic subsection Willdenowia. We propose that C. foliolosa, as currently recognized, represents a species complex of several phylogenetically distinct lineages, and conclude that C. brittonii is a structurally and phylogenetically distinct species worthy of conservation.     

Life history of <Emphasis Type="Italic">Gymnotus refugio</Emphasis> (Gymnotiformes; Gymnotidae): an endangered species of weakly electric fish

The present study describes the life history of Gymnotus refugio, a species classified as Endangered in the last published list of threatened species of the Brazilian fauna. The study was conducted at a conservation unity that protect one of the last remaining semideciduous forests in the region. The reproductive period was estimated as occurring from the end of winter to the last summer months. Gymnotus refugio exibited fractional spawning, the lowest relative fecundity registered among the Gymnotifomes species studied at the present, and male parental care behavior. The analyses showed a seasonal pattern on the species diet, associating different food categories to winter, autumn, and spring. According to food items analysis and estimated intestinal quotient, G. refugio was classified as invertivorous, feeding mainly on autochthonous insects. The results obtained herein suggest that the position of G. refugio as an Endangered species might be influenced by its territoriality, habitat specificity, parental care behavior, and low fecundity, reinforcing the importance of swampy forest environment conservation as the only means of the species maintenance.     

What are palm groves of <Emphasis Type="Italic">Phoenix</Emphasis>? Conservation of <Emphasis Type="Italic">Phoenix</Emphasis> palm groves in the European Union

There are three species of Phoenix (Arecaceae) in the territory of the European Union, P. canariensis, P. dactylifera and P. theophrasti, found in wild-native populations, feral, planted and intermediate states, accounting each for thousands of individuals. The EU Habitats Directive has addressed the conservation of P. theophrasti and P. canariensis under the habitat type 9370, ‘Palm groves of Phoenix,’ but neglected to include the wild-growing populations of P. dactylifera palms in southern Spain. In this paper, we survey the habitats and status of both representative native and naturalized populations of Phoenix, in total 103, through fieldwork, image analysis and review of literature. We underline the significance of feral populations and palms originating from ancient abandoned plantations, existing in protected areas as a reservoir of genetic variation. We conclude that, in order to improve their conservation status by adequate protection and conservation management, the concept of Phoenix palm groves in the Habitats Directive should be redefined to include the western group of P. dactylifera and the various habitats of P. canariensis and P. theophrasti that do not appear in the current definition.     

Assessment of Habitat Fragmentation and Corridors for an Isolated Subspecies of the Sichuan Golden Snub-Nosed Monkey, <Emphasis Type="Italic">Rhinopithecus roxellana hubeiensis</Emphasis>

Understanding habitat quality and landscape connectivity and exploring corridors connecting habitat patches are crucial for conservation, particularly for species distributed among isolated populations. The Sichuan golden snub-nosed monkey, Rhinopithecus roxellana, is an Endangered primate species endemic to mountainous forests in China. Its easternmost distribution lies in the Shennongjia area, which harbors an isolated subspecies, R. roxellana hubeiensis. Unfortunately, it has experienced significant habitat loss, fragmentation, and dramatic population decline in recent decades, primarily due to increased human disturbance. To quantify habitat quality, identify suitable habitat patches, and detect possible linkages among these patches for R. roxellana hubeiensis, we conducted habitat suitability assessments and landscape connectivity analyses in the Shennongjia area based on a set of environmental factors. We created a habitat quality model and a movement cost surface for the Shennongjia area based on a habitat suitability index, graph theory, expert knowledge, field experience, and information from the literature. Our results show that suitable habitat for R. roxellana hubeiensis in Shennongjia is fragmented and limited, and that this is particularly true for highly suitable habitats. We detected six core habitat patches and six least-cost paths and corridors. Our study does not provide accurate distributions of the monkeys and their habitat use. However, it identifies the most feasible and traversable habitats and corridors, which should be conservation priorities for this subspecies, and provides valuable guidance for reevaluating habitat conservation plans.     

Establishment of <Emphasis Type="Italic">Anolis sagrei</Emphasis> on Bermuda represents a novel ecological threat to Critically Endangered Bermuda skinks (<Emphasis Type="Italic">Plestiodon longirostris</Emphasis>)

Bermuda is an isolated, oceanic island with only one endemic terrestrial vertebrate, the Critically Endangered Bermuda skink (Plestiodon longirostris; Squamata, Scincidae). Major declines in P. longirostris populations have been caused primarily by habitat loss and mortality via invasive species (e.g., predation from birds and cats) and human waste products (e.g., trapped in discarded bottles). However, biotic interactions and interspecific competition with invasive lizards have also been identified as potentially detrimental to P. longisrostris populations. Here, we provide the first occurrence records of a highly invasive lizard, the Cuban brown anole (Anolis sagrei), on Bermuda. We assess the brown anole’s diet, habitat use, morphology, and island-wide distribution for comparison to the native skink, P. longirostris. Results of this study indicate that A. sagrei in Bermuda are highly terrestrial (>60% of all lizards observed on the ground vs. in trees) and forage primarily on terrestrial invertebrates. These data indicate substantial ecological overlap with the exclusively-terrestrial P. longirostris. This is in contrast to the other established non-native lizards on Bermuda, which are principally arboreal and have successfully coexisted with P. longirostris for >60 years. At present, the geographic distributions of A. sagrei and P. longirostris do not overlap. However, all extant skink populations are within several kilometers of brown anole populations (with the nearest being <0.5 km). The extensive overlap in ecological niche between the Bermuda skink and the invasive brown anole will likely present a serious conservation threat if contact is made. This study is exceptional in providing clear in situ ecological data which predict a conservation threat of an established invasive species to a Critically Endangered island endemic prior to coexistence. Continued monitoring of this situation as P. longirostris and A. sagrei inevitably come into contact will allow these a priori hypotheses of conservation risk via ecological overlap to be tested.     

Genetic structure and environmental niche modeling confirm two evolutionary and conservation units within the western spadefoot (<Emphasis Type="Italic">Spea hammondii</Emphasis>)

The western spadefoot (Spea hammondii) is a Species of Special Concern in California and is now under review by the U.S. Fish and Wildlife Service for listing under the Endangered Species Act. We delineated potential conservation units within S. hammondii by analyzing spatial genetic structure across the species’ range using five nuclear and one mitochondrial loci. For both nuclear and mitochondrial markers we found that S. hammondii consists of two genetically distinct, allopatric clusters divided by the Transverse Ranges. To corroborate the northern and southern genetic clusters as conservation units from an ecological perspective, we applied a niche identity test to environmental niche models of the two groups. We found that the niche models of the northern and southern clusters were significantly different, suggesting they may be ecologically non-exchangeable. Given our demonstration of significant genetic and ecological differentiation between allopatric clusters of S. hammondii, we recommend that ongoing conservation efforts consider each as a separate unit with potentially unique management needs.     

Genetic assessment of the threatened microendemic <Emphasis Type="Italic">Pleurodeles poireti</Emphasis> (Caudata,Salamandridae), with molecular evidence for hybridization with <Emphasis Type="Italic">Pleurodeles nebulosus</Emphasis>

Short-range endemics are high-priority conservation targets, and valuable information for their management can be obtained from assessments of genetic diversity and structure, including potential hybridization with related species, and the investigation of factors shaping their patterns of occurrence. The Edough ribbed newt, Pleurodeles poireti, is restricted to the Edough Peninsula in Algeria, and listed as Endangered in IUCN’s Red List. Its range is completely surrounded by the more widespread, closely related, Algerian ribbed newt, Pleurodeles nebulosus. Here we examined patterns of genetic diversity and structure in P. poireti using mtDNA sequences of the ND4 gene and a suite of 12 polymorphic microsatellites in a sample of 193 individuals from 46 populations covering the whole range of P. poireti and neighboring populations of P. nebulosus. We also investigated the influence of environmental variables (climate, topography, soil texture and plant cover) on the patterns of occurrence of both species. Genetic data allow fine scale delineation of the ranges of the two species and provide evidence for hybridization in several localities in a broad area of overlap. Niche analyses indicate that P. nebulosus and P. poireti tend to occupy similar niches and that the hybrid zone is not associated to an ecotone. This suggests that the range boundaries of the two species may be constrained by reciprocal exclusion, although in the case of P. poireti there are additional environmental constraints. These distributional patterns could be explained by high occupation of habitats by P. poireti, hindering the penetration of P. nebulosus by a ‘density blocking’ effect.     

Infectious Diseases in Free-Ranging Blonde Capuchins, <Emphasis Type="Italic">Sapajus flavius,</Emphasis> in Brazil

The main threats to primates worldwide are the degradation, fragmentation, and loss of their habitats; hunting (especially for bushmeat); and illegal trade. For many species, the most important threat is forest fragmentation, resulting in small populations that are restricted to isolated forest patches. In this situation, primates are particularly vulnerable to disease. The Endangered blonde capuchin (Sapajus flavius) is now restricted to a few forest patches in Northeast Brazil. We investigated the occurrence of parasites and bacterial diseases in one of three free-ranging groups of S. flavius in a small forest patch in Paraíba state, Northeast Brazil. We tested for antibodies against Leishmania spp., Trypanosoma cruzi, Toxoplasma gondii, Leptospira spp. (24 strains), and Brucella spp.. We used molecular analysis to detect Plasmodium spp., and evaluated blood smears for the presence of hemoparasites. All individuals tested negative for Leptospira spp. and B. abortus, but 8 of 48 (16%) presented antibodies for both Leishmania spp. and T. cruzi. We identified antibodies to T. gondii in 12% of the individuals tested. Plasmodium brasilianum infection was present in 4% of the individuals tested, and blood smears showed microfilariae parasites in 46% of the individuals tested. The occurrence of these infectious diseases in S. flavius may pose a significant threat in terms of reduced recruitment and poor survival rates, and an understanding of the influence of pathogens is crucial for the management of small populations of primates.     

Inter-species variation in unpalatability does not explain polymorphism in a mimetic species

Conspicuous colouration in unpalatable organisms acts as a warning signal of their unprofitability, a phenomenon known as aposematism. The protection conferred by such colouration can lead to evolutionary convergence in warning signals between aposematic species, because sharing warning signals reduces the per capita cost of predator learning. Consequently, most aposematic species display a single colour pattern and participate in a single mimetic community (i.e. mimicry ring) at any given locality. However, some, like the Amazonian butterfly Heliconius numata, are polymorphic and participate in several mimicry rings within the same locality. We tested whether the unexpected polymorphism of H. numata could be due to a weak defence against predators. Poorly defended species participating in a mimicry ring are subject to negative frequency dependent selection, because their presence weakens the protection provided by the shared signal. This could promote polymorphism and participation in multiple mimicry rings. Using wild caught great tits (Parus major), we compared the palatability of H. numata to one of its locally monomorphic co-mimics (Mechanitis polymnia) and to two other locally monomorphic Heliconius species (H. melpomene and H. erato). The tested birds strongly rejected the polymorphic species H. numata, as well as the two other Heliconius species. Unexpectedly, a significantly weaker rejection was found towards M. polymnia, which relies on different toxic compounds to Heliconius. Our study demonstrates that the origin of polymorphic mimicry in H. numata is unlikely to stem from low unpalatability and raises new questions on defence variation within mimetic communities.     

<Emphasis Type="Italic">Bruguiera hainesii</Emphasis>, a critically endangered mangrove species,is a hybrid between <Emphasis Type="Italic">B. cylindrica</Emphasis> and <Emphasis Type="Italic">B. gymnorhiza</Emphasis> (Rhizophoraceae)

Bruguiera hainesii (Rhizophoraceae) is one of the two Critically Endangered mangrove species listed in the IUCN Red List of Threatened Species. Although the species is vulnerable to extinction, its genetic diversity and the evolutionary relationships with other Bruguiera species are not well understood. Also, intermediate morphological characters imply that the species might be of hybrid origin. To clarify the genetic relationship between B. hainesii and other Bruguiera species, we conducted molecular analyses including all six Bruguiera species using DNA sequences of two nuclear genes (CesA and UNK) and three chloroplast regions (intergenic spacer regions of trnL-trnF, trnS-trnG and atpB-rbcL). For nuclear DNA markers, all nine B. hainesii samples from five populations were heterozygous at both loci, with one allele was shared with B. cylindrica, and the other with B. gymnorhiza. For chloroplast DNA markers, the two haplotypes found in B. hainesii were shared only by B. cylindrica. These results suggested that B. hainesii is a hybrid between B. cylindrica as the maternal parent and B. gymnorhiza as the paternal one. Furthermore, chloroplast DNA haplotypes found in B. hainesii suggest that hybridization has occurred independently in regions where the distribution ranges of the parental species meet. As the IUCN Red List of Threatened Species currently excludes hybrids (except for apomictic plant hybrids), the conservation status of B. hainesii should be reconsidered.     

Genetic diversity of free-living <Emphasis Type="Italic">Symbiodinium</Emphasis> in the Caribbean: the importance of habitats and seasons

Although reef corals are dependent of the dinoflagellate Symbiodinium, the large majority of corals spawn gametes that do not contain their vital symbiont. This suggests the existence of a pool of Symbiodinium in the environment, of which surprisingly little is known. Reefs around Curaçao (Caribbean) were sampled for free-living Symbiodinium at three time periods (summer 2009, summer 2010, and winter 2010) to characterize different habitats (water column, coral rubble, sediment, the macroalgae Halimeda spp., Dictyota spp., and Lobophora variegata, and the seagrass Thalassia testudinum) that could serve as environmental sources of symbionts for corals. We detected the common clades of Symbiodinium that engage in symbiosis with Caribbean coral hosts A, B, and C using Symbiodinium-specific primers of the hypervariable region of the chloroplast 23S ribosomal DNA gene. We also discovered clade G and, for the first time in the Caribbean, the presence of free-living Symbiodinium clades F and H. Additionally, this study expands the habitat range of free-living Symbiodinium as environmental Symbiodinium was detected in T. testudinum seagrass beds. The patterns of association between free-living Symbiodinium types and habitats were shown to be complex. An interesting, strong association was seen between some clade A sequence types and sediment, suggesting that sediment could be a niche where clade A radiated from a free-living ancestor. Other interesting relationships were seen between sequence types of Symbiodinium clade C with Halimeda spp. and clades B and F with T. testudinium. These relationships highlight the importance of some macroalgae and seagrasses in hosting free-living Symbiodinium. Finally, studies spanning beyond a 1-yr cycle are needed to further expand on our results in order to better understand the variation of Symbiodinium in the environment through time. All together, results presented here showed that the great diversity of free-living Symbiodinium has a dynamic distribution across habitats and time.     

Species delimitation and conservation genetics of the Canarian endemic <Emphasis Type="Italic">Bethencourtia</Emphasis> (Asteraceae)

Bethencourtia Choisy ex Link is an endemic genus of the Canary Islands and comprises three species. Bethencourtia hermosae and Bethencourtia rupicola are restricted to La Gomera, while Bethencourtia palmensis is present in Tenerife and La Palma. Despite the morphological differences previously found between the species, there are still taxonomic incongruities in the group, with evident consequences for its monitoring and conservation. The objectives of this study were to define the species differentiation, perform population genetic analysis and propose conservation strategies for Bethencourtia. To achieve these objectives, we characterized 10 polymorphic SSR markers. Eleven natural populations (276 individuals) were analyzed (three for B. hermosae, five for B. rupicola and three for B. palmensis). The results obtained by AMOVA, PCoA and Bayesian analysis on STRUCTURE confirmed the evidence of well-structured groups corresponding to the three species. At the intra-specific level, B. hermosae and B. rupicola did not show a clear population structure, while B. palmensis was aggregated according to island of origin. This is consistent with self-incompatibility in the group and high gene flow within species. Overall, the genetic diversity of the three species was low, with expected heterozygosity values of 0.302 (B. hermosae), 0.382 (B. rupicola) and 0.454 (B. palmensis). Recent bottleneck events and a low number of individuals per population are probably the causes of the low genetic diversity. We consider that they are naturally rare species associated with specific habitats. The results given in this article will provide useful information to assist in conservation genetics programs for this endemic genus.     

Natural re-establishment of a population of a critically endangered primate in a secondary forest: the San Martin titi monkey (<Emphasis Type="Italic">Plecturocebus oenanthe</Emphasis>) at the Pucunucho Private Conservation Area,Peru

The San Martin titi monkey (Plecturocebus oenanthe) is endemic to a small area of northern Peru and is considered Critically Endangered on the IUCN due to massive habitat loss. Between 1994 and 2005 small scale reforestation efforts in the 23.5 ha area of Pucunucho have led to the recuperation of habitat from an area of pasture and crop lands. The first record of P. oenanthe re-establishment in the area is from 2010, although re-establishment probably began earlier. We carried out short population surveys using triangulation to monitor densities of P. oenanthe in Pucunucho in 2011, 2012 and 2016. We estimate the current population of P. oenanthe in this area at 27 individuals, giving population densities of 35 groups/km² and 124 individuals/km². The successful regeneration of habitat and natural re-population of the area by this Critically Endangered species provides evidence of successful reforestation based conservation activities for this and potentially other primate species. Although now protected as a Private Conservation Area, Pucunucho remains threatened.     

New mayflies (Insecta: Ephemerida = Ephemeroptera) from the Upper Mesozoic locality of Khasurty,Western Transbaikalia

A new genus and four new species are described from the Upper Mesozoic locality of Khasurty, Western Transbaikalia: Mesobaetis crispa sp. nov. and Proameletus branchiatus sp. nov. from the family Siphlonuridae s. l., Furvoneta khasurtensis sp. nov. from Mesonetidae, and Baikalogenites firmus gen. et sp. nov. from the family Hexagenitidae. One poorly preserved specimen is identified as Mesogenesia from the family Mickoleitiidae. The unique mayfly generic assemblage of this locality, its possible age, and ecology are discussed.     

Historical land use and present-day canopy thinning differentially affect the distribution and abundance of invasive and native ant species

Disturbance may play a key role in affecting animal invasions; less appreciated is that past and present disturbances might interact to affect invasion. For example, although large portions of forest ecosystems worldwide are jointly affected by a history of past agricultural land use as well as contemporary timber harvest, it is unclear whether these disturbances facilitate biological invasions. We conducted a large-scale experiment that coupled adjacent non-agricultural and post-agricultural sites and a factorial canopy-thinning manipulation to understand how past agricultural land use might interact with contemporary canopy thinning to affect the distribution (i.e., presence/absence of mounds) and abundance of a highly invasive ant species, Solenopsis invicta, and common native ant species, Dorymyrmex bureni. Mounds of S. invicta were more likely to be present in unthinned post-agricultural habitats than unthinned non-agricultural habitats, but this legacy effect disappeared with canopy thinning. In unthinned habitats, the presence of D. bureni mounds did not differ based on past land use. However, presence of D. bureni mounds was greater in thinned non-agricultural habitats than thinned post-agricultural habitats. Once present in an area, mound abundance was largely related to temperature near the ground for both species, and negatively related to soil compaction for D. bureni. Our results provide large-scale evidence that an understanding of anthropogenic events that occur decades before present may be essential for interpreting contemporary invasion dynamics and the distribution of some species, and that local contemporary habitat characteristics play a key role in determining ant abundance once an area is colonized.     

The Acoustic Habitat Hypothesis: An Ecoacoustics Perspective on Species Habitat Selection

Sound is an inherent component of the environment that provides conditions and information necessary for many animal activities. Soniferous species require specific acoustic and physical conditions suitable for their signals to be transmitted, received, and effectively interpreted to successfully identify and utilize resources in their environment and interact with conspecifics and other heterospecific organisms. We propose the Acoustic Habitat Hypothesis to explain how the acoustic environment influences habitat selection of sound-dependent species. We postulate that sound-dependent species select and occupy habitats with unique acoustic characteristics that are essential to their functional needs and conducive to the threshold of sound frequency they produce and detect. These acoustic habitats are based on the composition of biophony, geophony, and technophony in the soundscape and on the biosemiotics mechanisms described in the eco-field hypothesis. The Acoustic Habitat Hypothesis initiates questions of habitat selection that go beyond the physical attributes of the environment by applying ecoacoustics theory. We outline the theoretical basis of the Acoustic Habitat Hypothesis and provide examples from the literature to support its assumptions. The concept of acoustic habitats has been documented in the literature for many years but here, we accurately and extensively define acoustic habitat and we put this concept into a unified theory. We also include perspectives on how the Acoustic Habitat Hypothesis can stimulate a paradigm shift in conservation strategies for threatened and endangered species.     

Sitting ducks: diet of wintering wildfowl in Lake Tonga,northeast Algeria

Dietary studies of five species of Anatidae (Gadwall Anas strepera, Shoveler Anas clypeata, Pochard Aythya ferina, Ferruginous Duck Aythya nyroca, and White-headed Duck Oxyura leucocephala) were carried out at Lake Tonga, northeast Algeria, from December 2011 to March 2012. Diet analysis of all five wintering species indicated a heavy reliance on seeds, which included a wide variety of aquatic plants, such as Myriophyllum spicatum, Ceratophyllum demersum, Sparganium erectum, Scirpus lacustris and Potamogeton pectinatus. Noteworthy is the paucity of ingested macroinvertebrates. Despite dietary overlap, the type, abundance and frequency of food consumed clearly indicated differences in resource use among the ducks. Incidentally, the study also highlighted the high vulnerability of threatened ducks to poaching (harvesting and disturbance) in a protected area. We discuss the implications of these findings for the management and conservation of wintering wildfowl and their North African habitats.