To be or not to be a valid genus: the systematic position of Ophyra R.‐D. revised (Diptera: Muscidae)

Ophyra Robineau‐Desvoidy is one of the better‐studied genera of the family Muscidae (Diptera). The larvae of species of this genus feed on highly decomposed organic matter of various origins, and may reveal predatory behaviour as they mature. These feeding habits, combined with the widespread distribution and close association with human dwellings of some species, give the genus commercial and medico‐legal importance. However, the systematic position of Ophyra has been a matter of debate for many years. Ophyra has been considered by muscid workers to be either a valid genus or a junior synonym of Hydrotaea Robineau‐Desvoidy. A lack of agreement about the systematic position of Ophyra has led to serious errors, particularly in the applied literature. Recent molecular and morphological studies provided contradictory information on the validity of the genus and its subfamilial classification. We revise the systematic position of Ophyra herein by means of molecular phylogenetic reconstruction. Our results are incongruent with opinions on the systematic position of Ophyra based on previously published molecular phylogenies, although they correspond with the concept of the genus based on adult morphology. All analyses of the concatenated dataset revealed Ophyra as monophyletic and placed within a paraphyletic Azeliini. Depending on the phylogenetic approach, Ophyra was placed within either a monophyletic, paraphyletic or polyphyletic Hydrotaea, yet always closely related to a certain group of species. We conclude that Ophyra, as currently defined, should not be considered a valid name, yet a detailed reconstruction of the genus Hydrotaea awaits future studies with greater increases in both taxon sampling and the number of molecular markers.     

Phylogenetic relationships of flesh flies in the subfamily Sarcophaginae based on three mtDNA fragments (Diptera: Sarcophagidae)

In an effort to improve our knowledge of the phylogenetic relationships among species and genera of the subfamily Sarcophaginae, we analysed data from three mitochondrial gene fragments. Sequence data for portions of the genes cytochrome oxidase I (COI), cytochrome oxidase II (COII) and dehydrogenase subunit 4 (ND4) were obtained from 43 species of Sarcophagidae representing 15 genera. We used a Bayesian approach to simultaneously choose how best to partition the data and which substitution model to apply to each partition. Phylogenetic relationships were inferred using Bayesian Inference and Maximum Likelihood methods. Our results are consistent with monophyly of the subfamily Sarcophaginae (posterior probability 1; bootstrap support 93%), as well as with monophyly of several genera within the Sarcophaginae (including Sarcophaga s.l.; posterior probability 1; bootstrap support 97%). We found support for a sister‐group relationship between Ravinia Robineau‐Desvoidy and Oxysarcodexia Townsend, which has been hypothesised by past authors on the basis of morphological similarities, although this was supported only in the Bayesian analyses (posterior probability 0. 81–0. 98), and for some novel supra‐generic clades. Contrary to a recent morphological hypothesis, we do not find Helicobia Coquillett to be nested within Sarcophaga Meigen; our data suggest, but do not strongly support, a hypothesis that Peckia Robineau‐Desvoidy is the sister group to Sarcophaga.     

Taxonomy of the genus Scatella Robineau-Desvoidy (Diptera: Ephydridae) in Korea

The genus Scatella Robineau‐Desvoidy, including S. callosicosta Bezzi, S. nipponica Miyagi, S. paludum (Meigen) and S. stagnalis (Fallén), is reported for the first time in Korea. A key to the Korean species, and reports of their domestic localities, are given. Some illustrations of male and female genitalic structures are included.     

Reclustering the cluster flies (Diptera: Oestroidea,Polleniidae)

A phylogenetic analysis of selected oestroid taxa based on 66 morphological traits and sequences from three nuclear protein‐coding genes (CAD, MAC, MCS) resolved the composition and phylogenetic position of the former subfamily Polleniinae of the Calliphoridae – here resurrected at family rank as Polleniidae Brauer & Bergenstamm, 1889 stat. rev. Six species are transferred from the family Rhinophoridae to the Polleniidae: the Palaearctic genus Alvamaja Rognes, along with its single species Alvamaja chlorometallica Rognes, and five Afrotropical species comprising the carinata‐group formerly in the genus Phyto Robineau‐Desvoidy but here assigned to genus Morinia Robineau‐Desvoidy, i.e. M. carinata (Pape, 1987) comb.n. , M. lactineala (Pape, 1997) comb.n. , M. longirostris (Crosskey, 1977) comb.n. , M. royi (Pape, 1997) comb.n. and M. stuckenbergi (Crosskey, 1977) comb.n. The Polleniidae are monophyletic and, in agreement with most recent phylogenetic reconstructions, sister to the Tachinidae. The female of A. chlorometallica and a new species of Morinia of the carinata‐group (Morinia tsitsikamma sp.n. from South Africa) are described. This published work has been registered in ZooBank, http://zoobank.org/urn:lsid:zoobank.org:pub:25B0C220‐DEE4‐4B0C‐88EA‐35FDE298EBC5 .     

Revision of the subgenus Ceranthia Robineau-Desvoidy of the genus Siphona Meigen of Japan (Diptera: Tachinidae)

Japanese species of the subgenus Ceranthia Robineau‐Desvoidy are revised. Five species are recognized in Japan, three of which are described as new to science: Siphona (Ceranthia) angusta, S. (C.) nigra and S. (C.) setigera. A key to Japanese species is provided and male terminalia are illustrated. Monophyly of this group is discussed.     

Molecular phylogeny of the Korean Rivellia species (Diptera: Tephritoidea: Platystomatidae) based on 16S rDNA sequences: Testing morphological hypotheses using molecular data

The phylogeny of the genus Rivellia Robineau‐Desvoidy was inferred from mitochondrial 16S ribosomal (r)DNA gene sequences of 13 Korean Rivellia species and six species representing other platystomatid genera and the family Tephritidae. We compared the inferred molecular phylogeny with the previously published morphological cladogram. As a result, the following phylogenetic relationships were recognized: (i) monophyly of the genus Rivellia; (ii) monophyly of the R. syngenesiae species group; (iii) R. depicta and R. apicalis (which were not previously placed in any species group) were recognized as a sister group of the R. syngenesiae species group; and (iv) monophyly of the R. basilaris species group was recognized to a limited extent. These results, even though geographically limited, provide a new insight into the phylogeny of the genus Rivellia. They clearly show the utility of 16S rDNA for phylogenetic analysis of the genus Rivellia. Additional study involving samples from different geographical areas will be needed to gain a better understanding of the adaptive radiation of this species‐rich genus.     

Chrysomyinae (Diptera: Calliphoridae) is monophyletic: a molecular systematic analysis

The subfamily Chrysomyinae includes blowflies of considerable ecological and applied importance. Previous extensive morphological investigations have affirmed chrysomyine monophyly, but did not support the monophyly of traditional chrysomyine tribes. Conversely, molecular systematic analyses suggested a para‐ or polyphyletic Chrysomyinae. Conflicting hypotheses have been proposed about the tribe‐level classification, and about the relationships of the obligate bird parasites Protocalliphora Hough and Trypocalliphora Peus. To understand chrysomyine evolution better, we reconstructed phylogenies of the Chrysomyinae based on 2285 bp of combined data from mitochondrial cytochrome oxidase c subunit 1 (COI) and nuclear carbamoylphosphate synthetase (CPS) genes. Maximum parsimony (MP), maximum likelihood (ML) and Bayesian analysis (BA) strongly supported the monophyly of Chrysomyinae and the paraphyly of the tribe Chrysomyini. BA and ML yielded a monophyletic tribe Phormiini, but this was unresolved by MP. A sister‐group relationship between Trypocalliphora and Protocalliphora indicates that obligate bird parasitism evolved once within the Calliphoridae. For the first time all Neotropical genera (Cochliomyia Townsend, Compsomyiops Townsend, Paralucilia Brauer and Bergenstamm, Hemilucilia Brauer and Chloroprocta Wulp) were found to comprise a single lineage, and Chrysomya Robineau‐Desvoidy, traditionally a member of Chrysomyini, was found to be closer to the Phormiini. Similarly, Hemilucilia + Chloroprocta was a monophyletic group. Every genus for which we examined more than one species was monophyletic.     

Phylogenetic relationships of subgenera of the genus Exorista Meigen,with a revision of the Japanese species (Diptera: Tachinidae)

Phylogenetic relationships of the subgenera of Exorista Meigen (Diptera: Tachinidae) are inferred from morphological data. Our results show that the genus Exorista is not monophyletic and that members of the subgenus Spixomyia Crosskey are divided into two clades. Each subgenus is redefined based on male and female morphological features. The Japanese species of Exorista are revised and classified into five subgenera: Adenia Robineau‐Desvoidy, Exorista Meigen, Podotachina Brauer and Bergenstamm, Ptilotachina Brauer and Bergenstamm, and Spixomyia Crosskey. Thirteen species are recognized, including two newly recorded species, Exorista (Adenia) cuneata Herting and Exorista (Spixomyia) lepis Chao. Exorista cantans Mesnil is transferred to the subgenus Podotachina from Spixomyia.     

Evolution of the Neotropical ant genus Linepithema

Abstract A comprehensive species‐level phylogeny of the ant genus Linepithema Mayr, a Neotropical group best known for the invasive Argentine ant L. humile (Mayr), is inferred for the first time using fragments from three nuclear loci [wingless (WG), long‐wavelength rhodopsin (LWR) and internal transcribed spacer (ITS‐2)] and the mitochondrial cytochrome oxidase subunit I (COI) gene. Monophyly of the genus is strongly supported in parsimony, likelihood and Bayesian analyses of the concatenated data, as is the monophyly of four species groups defined previously on the basis of morphology. An Andean species, L. oblongum (Santschi), is the sister taxon of the Argentine ant. Eight of the 11 species whose monophyly was testable in the analysis were inferred to be monophyletic. Several instances of species paraphyly and one case of mitochondrial introgression suggest that complex population genetic processes underpin the patterns of diversity in Linepithema, and that simple genetic approaches to taxonomy such as DNA barcoding should be treated with caution. A maximum likelihood reconstruction of ancestral distributions suggests that Linepithema is of southern South American origin and that populations in the Greater Antilles are the result of four independent colonization events.     

棘蝇属侧突棘蝇新种团一新种 (双翅目：蝇科)

 报道了我国长白山的蝇科棘蝇属一新种东方棘蝇Phaonia orie ntalis sp.nov.,并提出一新种团P.laticrassa\|group。模式标本保存于沈阳师范学院昆虫研究所。     

The first instar larva of two species of Miltogramminae (Diptera: Sarcophagidae) from the Middle East – examples of peculiar morphology

The first instar larva is described for two species of Miltogramminae flesh flies representing the genera Miltogramma Meigen and Phrosinella Robineau‐Desvoidy. Using a combination of light microscopy and scanning electron microscopy, the habitus is documented along with all important exoskeletal and cephaloskeletal structures. The described first instar larvae show substantial modifications of their morphology in comparison with the saprophagous ground plan defined for calyptrate flies. Miltogramma (Miltogrammidium) efflatouni Rohdendorf possesses the general set of derived character states shared with other species of Miltogramma and shares larval synapomorphies with species representing the subgenera Anacanthothecum Rohdendorf, Cylindrothecum Rohdendorf and Miltogrammidium Rohdendorf. Unique character states of the first instar larva of this species are the spine‐like shape of antennal complex, laterally compressed apical part of mouthhooks and an extreme elongation of the sensilla of the maxillary palpus. Phrosinella (Asiometopa) ujgura (Rohdendorf) possesses a pair of retractable, robust processes on the ventral margin of the first thoracic segment and a very strong, elongated labrum. Both character states are present in other known first instar larvae of genus Phrosinella. A reduction of cuticular ridges on dorsal and lateral surfaces of abdominal segments supports a monophylum consisting of the subgenera Asiometopa Rohdendorf and Caspiomyia Rohdendorf within genus Phrosinella.     

Phylogenetics of the common raven complex (Corvus: Corvidae) and the utility of ND4, COI and intron 7 of the β-fibrinogen gene in avian molecular systematics

The common raven (Corvus corax) is one of the most widely distributed and recognizable avian species in the world. Recent molecular work, however, described two mitochondrial lineages of the common raven, termed the Holarctic clade and the California clade, and questioned the monophyly of this taxon by placing the Chihuahuan raven (C. cryptoleucus) sister to the California clade. We evaluated this phylogenetic hypothesis with additional sequence data and increased taxon sampling. We used ～3.7 kb of DNA sequence data from sections of the mitochondrial coding genes COI, cyt b and ND4, a fragment of the non‐coding mitochondrial DNA control region, and the entire intron 7 of the nuclear β‐fibrinogen gene (β‐fibint 7). We combined these DNA sequence data to erect hypotheses of relationships for lineages of the common raven and related taxa. Maximum parsimony, maximum likelihood, and Bayesian methods yield a paraphyletic common raven. These analyses nest the Chihuahuan raven within the common raven, with strong support for a sister relationship between the Chihuahuan raven and the California clade. In addition, the pied crow (C. albus) is also nested within the common raven, and is sister to the Holarctic clade. Our analyses reveal the challenge of determining phylogenetic relationships and species boundaries in this morphologically conservative genus, and suggest that future molecular work with increased taxon sampling will uncover cryptic species and novel evolutionary relationships. Lastly, this survey is one of a growing number of avian phylogenetic studies to employ either β‐fibint 7 or COI, and the first to use ND4. We developed a simple procedure for comparing rates of evolution in molecular markers, and show that in Corvus the nuclear intron β‐fibint 7 is evolving at a considerably slower pace than the mitochondrial markers, while COI is evolving at a slower rate than cyt b, and ND4 approximately the same rate as cyt b. Hence, β‐fibint 7 and other individual nuclear introns may have limited utility in resolving relationships among recently evolved taxa, whereas both COI and ND4 should be useful in a wide range of avian molecular genetic investigations.     

A new genus and species of hypodermatine bot flies (Diptera: Oestridae)

The bot fly Gruninomyia mira Szpila & Pape, gen.n. , sp.n. is described from Iran, North Khorasan, based on a single adult male and with no larval or host data. The monotypic genus shows a mixture of features otherwise found in either the rodent/lagomorph‐parasitizing oestromyine clade (Oestroderma + Oestromyia) or the artiodactyl‐parasitizing hypodermatine clade (Hypoderma + Pallasiomyia + Pavlovskiata + Przhevalskiana + Strobiloestrus) of subfamily Hypodermatinae. A morphology‐based phylogenetic analysis is marginally in favour of a position of Gruninomyia Szpila & Pape, gen.n. as sister taxon of (Oestroderma + Oestromyia). The COI barcode sequence is provided for the new species, and a phylogenetic analysis based on this marker for Oestridae retrieved from GenBank is in agreement with the conclusions based on morphological data. This published work has been registered in ZooBank: http://zoobank.org/urn:lsid:zoobank.org:pub:8F0CBE07‐4E74‐4186‐B690‐2C97D7ED7DA7 .     

Cryptic diversity in Brevipalpus mites (Tenuipalpidae)

Defining the taxonomic identity of organisms is a prerequisite for their study, and in the case of economically important species, misidentification may lead to the application of inappropriate prevention and control strategies. Flat mites of the Brevipalpus genus include several crop pests and the systematics of these mites represents a challenge for acarologists. Many of the most economically important Brevipalpus species have repeatedly been inaccurately identified. Such problematic classification has been attributed to the likely occurrence of cryptic species in the genus. In this study, we used an integrative approach that combined molecular analyses, including sequence‐based species delimitation, with detailed morphological identification using traits that have recently showed to be taxonomically informative. Sequences of mitochondrial cytochrome c oxidase subunit I (COI) were obtained from individuals collected from host plants belonging to 14 genera and 13 families across 29 locations in the Americas (Brazil, Chile, USA). The phylogenetic analyses included previously published Brevipalpus sequences from GenBank, and the final data set was classified into 44 haplotypes. Six putative species were recognised by COI‐based species delimitation analysis, and morphological evidence supported each of these species. The integrative approach revealed the occurrence of cryptic species in the Brevipalpus genus and contributed to the clarification of previously noted incongruences. The results presented here allow for the evaluation of taxonomic characteristics in a phylogenetic context and indicate new characters for the differentiation of Brevipalpus species. In addition, Brevipalpus incognitus n. sp. Ferragut & Navia, a cryptic species detected in this study, is described based on morphological and molecular traits. Implications of the advances in Brevipalpus systematics presented herein with respect to pest management are briefly discussed.     

Back from the dead: Thyreophora cynophila (Panzer, 1798) (Diptera: Piophilidae) ‘globally extinct’ fugitive in Spain

We report on a sensational find in central Spain of six specimens of Thyreophora cynophila ( Panzer, 1798 ), a colourful, strange‐looking piophilid fly living on carcasses of big mammals in advanced stages of decay. Published data suggest that the species is known exclusively from central western Europe (Germany, Austria and France), and was observed last near Paris, France, in the late 1840s, i.e. more than 160 years ago. Accordingly, T. cynophila was placed in 2007 as the only dipteran on a list of recent European animals considered to be globally extinct. Collection‐based data from all 16 known extant specimens found in seven European natural history museums revealed a specimen without date of T. cynophila from Algiers, Algeria. The status of the three thyreophorine piophilids known from Europe is summarized. For the smallest species we reinstate the name Centrophlebomyia anthropophaga ( Robineau‐Desvoidy, 1830 ) with Centrophlebomyia orientalis Hendel, 1907 as a subjective junior synonym ( syn.n. ). We speculate as to why thyreophorines, and T. cynophila in particular, have evaded detection for so long.     

Phylogenomic species delimitation and host‐symbiont coevolution in the fungus‐farming ant genus Sericomyrmex Mayr (Hymenoptera: Formicidae): ultraconserved elements (UCEs) resolve a recent radiation

Ants in the Neotropical genus Sericomyrmex Mayr cultivate fungi for food. Both ants and fungi are obligate, coevolved symbionts. The taxonomy of Sericomyrmex is problematic because the morphology of the worker caste is generally homogeneous across all of the species within the genus, species limits are vague, and the relationships between them are unknown. We used ultraconserved elements (UCEs) as genome‐scale markers to reconstruct evolutionary history and to infer species boundaries in Sericomyrmex. We recovered an average of ～990 UCE loci for 88 Sericomyrmex samples from across the geographical range of the genus as well as for five outgroup taxa. Using maximum likelihood and species‐tree approaches, we recovered nearly identical topologies across datasets with 50–95% matrix completeness. We identify nine species‐level lineages in Sericomyrmex, including two new species. This is less than the previously described 19 species, even accounting for two species for which we had no UCE samples, which brings the total number of Sericomyrmex species to 11. Divergence‐dating analyses recovered 4.3 Ma as the crown‐group age estimates for Sericomyrmex, indicating a recent, rapid radiation. We also sequenced mitochondrial cytochrome oxidase subunit I (COI) for 125 specimens. Resolution and support for clades in our COI phylogeny are weak, indicating that COI is not an appropriate species‐delimitation tool. However, taxa within species consistently cluster together, suggesting that COI is useful as a species identification (‘DNA barcoding’) tool. We also sequenced internal transcribed spacer (ITS) and large subunit (LSU) for 32 Sericomyrmex fungal cultivars. The fungal phylogeny confirms that Sericomyrmex fungi are generalized higher‐attine cultivars, interspersed with Trachymyrmex‐associated fungal species, indicating cultivar sharing and horizontal transfer between these two genera. Our results indicate that UCEs offer immense potential for delimiting and resolving relationships of problematic, recently diverged species.