Onygenalean Fungi as Major Human and Animal Pathogens

Mycopathologia - During the last two decades, many onygenalean pathogens were discovered, redefined, or re-classified from existing taxa into clusters of micro-species, among which the original...     

Studying Human Pathogens in Animal Models: Fine Tuning the Humanized Mouse

Humanized mice are crucial tools for studying human pathogens in systemic situations. An animal model of human coronavirus infectious disease has been generated by gene transfer of the human receptor for virus-cell interaction (aminopeptidase N, APN, CD13) into mice. We showed that in vitro and in vivo infections across the species barrier differ in their requirements. Transgenic cells were susceptible to human coronavirus HCoV-229E infection demonstrating the requirement of hAPN for viral cell entry. Transgenic mice, however, could not be infected suggesting additional requirements for in vivo virus susceptibility. Crossing hAPN transgenic mice with interferon unresponsive Stat1^−/− mice resulted in markedly enhanced virus replication in vitro but did not result in detectable virus replication in vivo. Adaptation of the human virus to murine cells led to successful infection of the humanized transgenic mice. Future genetic engineering approaches are suggested to provide animal models for the better understanding of human infectious diseases.     

Occurrence of Male-Specific Bacteriophage in Feral and Domestic Animal Wastes, Human Feces, and Human-Associated Wastewaters

Male-specific bacteriophage (MSB) densities were determined in animal and human fecal wastes to assess their potential impact on aquatic environments. Fecal samples (1,031) from cattle, chickens, dairy cows, dogs, ducks, geese, goats, hogs, horses, seagulls, sheep, and humans as well as 64 sewerage samples were examined for MSB. All animal species were found to harbor MSB, although the great majority excreted these viruses at very low levels. The results from this study demonstrate that in areas affected by both human and animal wastes, wastewater treatment plants are the principal contributors of MSB to fresh, estuarine, and marine waters.     

家畜试验中的一种相关扰动回归模型

本文根据数量遗传学原理,从家畜群体中同一家系内的个体之间存在的遗传相关性出发,建立了扰动项相关的回归模型,运用回归理论讨论一类相关样本的统计推断及其应用。     

Survival of Human Pathogens in Composted Sewage

Studies were conducted to assess the effectiveness of an aerobic composter in destroying pathogens that may possibly be present in raw sewage sludge. Experiments conducted in this study were designed to determine whether or not selected indicator organisms (i.e., Salmonella newport, poliovirus type 1, Ascaris lumbricoides ova, and Candida albicans) could survive the composting process. The results of the assay showed that after 43 hr of composting, no viable indicator organisms could be detected. The poliovirus type I was the most sensitive, being inactivated within the first hour, whereas C. albicans was the most resistant, requiring more than 28 hr of composting for its inactivation. The data from this study indicated that aerobic composting of sewage sludge would destroy the indicator pathogens when a temperature of 60 to 70 C is maintained for a period of 3 days.     

环介导等温扩增技术检测动物病原研究进展

综述了环介导等温扩增技术检测病毒、细菌和寄生虫等动物病原方面的研究和应用最新进展.     

Concentrations of Pathogens and Indicators in Animal Feces in the Sydney Watershed

A fecal analysis survey was undertaken to quantify animal inputs of pathogenic and indicator microorganisms in the temperate watersheds of Sydney, Australia. The feces from a range of domestic animals and wildlife were analyzed for the indicator bacteria fecal coliforms and Clostridium perfringens spores, the pathogenic protozoa Cryptosporidium and Giardia, and the enteric viruses adenovirus, enterovirus, and reovirus. Pathogen and fecal indicator concentrations were generally higher in domestic animal feces than in wildlife feces. Future studies to quantify potential pathogen risks in drinking-water watersheds should thus focus on quantifying pathogen loads from domestic animals and livestock rather than wildlife.     

巫山蓝家寨遗址家畜的动物骨骼

2012年巫山蓝家寨遗址考古发掘中,出土了春秋时期的马(Equus caballus)、黄牛(Bos taurus)、山羊(Capra hircus)、鸡(Gallus gallus domesticus)、狗(Canis familiaris)、猪(Sus domestica)6种家畜的骨骼。这是三峡地区唯一一个在先秦时期六畜兼备的古文化遗址。遗址中的马、牛,是三峡地区同类家畜中时代最早的发现资料。三峡地区早期历史时期,人类肉食资源以野生动物为主,家畜动物骨骼发现材料较少。蓝家寨遗址出现种类较多的家畜动物种类,为全面分析和认识三峡地区经济形态发展过程、古居民行为模式和区域文化等,提供了重要资料。遗址中在春秋时期出现的家畜马和黄牛,与该时期各种区域文化在三峡地区的碰撞、交流、融合有关。     

动物寿命与人类影响

地球上各种生物有机体的寿命是有本质差异的,即使一些大小、形态和生理上大体相似的生物之间也存在着这种差异。早期的研究多集中在探讨基因、热量限制、药物与动物特别是人类寿命的相关性上,而环境因素以及日益加剧的人类活动对动物寿命的影响则很少被涉及。目前,越来越多的证据显示,人类以倍人类活动对动物的寿命有着直接或间接的影响。正面的影响可以从近年来诸如自然保护区的建立等保护措施的实施活动中得到体现。然而,由于日益加剧的人类活动造成的自然生境的日益萎缩和片段化所带来的负面影响也是非常明显的,人们不应只关注人类活动如何导致物种的绝灭,也应研究人类如何改变动物的生存环境、寿命以及动物固有的生命轨迹。介绍了有关动物寿命研究的最新进展,呼吁更多的学者投身到环境因素对动物寿命的影响这一迅速升温的诱人的研究领域中来。植物方面的类似研究也应该尽早启动。     

Dominance in Domestic Dogs: A Quantitative Analysis of Its Behavioural Measures

A dominance hierarchy is an important feature of the social organisation of group living animals. Although formal and/or agonistic dominance has been found in captive wolves and free-ranging dogs, applicability of the dominance concept in domestic dogs is highly debated, and quantitative data are scarce. Therefore, we investigated 7 body postures and 24 behaviours in a group of domestic dogs for their suitability as formal status indicators. The results showed that high posture, displayed in most dyadic relationships, and muzzle bite, displayed exclusively by the highest ranking dogs, qualified best as formal dominance indicators. The best formal submission indicator was body tail wag, covering most relationships, and two low postures, covering two-thirds of the relationships. In addition, both mouth lick, as included in Schenkel’s active submission, and pass under head qualified as formal submission indicators but were shown almost exclusively towards the highest ranking dogs. Furthermore, a status assessment based on changes in posture displays, i.e., lowering of posture (LoP) into half-low, low, low-on-back or on-back, was the best status indicator for most relationships as it showed good coverage (91% of the dyads), a nearly linear hierarchy (h’ = 0.94, p<0.003) and strong unidirectionality (DCI = 0.97). The associated steepness of 0.79 (p<0.0001) indicated a tolerant dominance style for this dog group. No significant correlations of rank with age or weight were found. Strong co-variation between LoP, high posture, and body tail wag justified the use of dominance as an intervening variable. Our results are in line with previous findings for captive wolves and free-ranging dogs, for formal dominance with strong linearity based on submission but not aggression. They indicate that the ethogram for dogs is best redefined by distinguishing body postures from behavioural activities. A good insight into dominance hierarchies and its indicators will be helpful in properly interpreting dog-dog relationships and diagnosing problem behaviour in dogs.     

Next Generation Sequencing Uncovers Unexpected Bacterial Pathogens in Ticks in Western Europe

Background and Aims

Ticks are highly susceptible to global environmental and socio-economical changes. Several tick-borne pathogens have been reported in new geographical regions while new species, strains or genetic variants of tick-borne microorganisms are continually being detected. However, tick-borne pathogens are still poorly understood, and it is estimated that half of all human tick-borne disease has an unknown origin. Therefore in order to prevent these diseases, more effort is required to identify unknown or unexpected tick-borne pathogens. Ixodes ricinus is the vector for a broad range of bacterial pathogens and the most prevalent tick in Europe. The aim of the present study was to evaluate the capability of Next Generation Sequencing (NGS) to extend the inventory of pathogenic bacteria carried by this species of tick in France.

Methods

RNA and DNA were extracted from 1450 I. ricinus questing nymphs collected by flagging in Alsace, France. RNA was pooled and used for NGS. Following de novo assembly, bacterial contigs were assigned to the closest known taxonomy. DNA was used for real time PCR to confirm taxonomic species assignment of NGS-derived contigs for the doubtful cases, and for determination of prevalence.

Results

We have generated a global in-depth picture of tick-borne bacteria. We identified RNA from the main pathogenic bacterial species known to be transmitted by I. ricinus. In addition we also identified unanticipated bacterial species for which we have estimated the prevalence within those ticks inhabiting the studied areas.

Conclusions

The data obtained from this study has proven that NGS has an enormous potential to detect the unexpected and provides the means to monitor pathogen occurrence.     

Concentration and Composition of Serum and Plasma Glycosaminoglycans in Domestic Animal Species

Acid glycosaminoglycans (GAGs) were isolated from serum and/or plasma of some domestic animals and the composition of the isolated GAG mixtures were studied. Mean values of total GAG concentration, in terms of hexuronic acid, ranged from a maximum of about 12 mg/l in serum of calves, trained horses and sheep to about 9 mg/l in serum of cows and donkeys and in plasma of trained horses to about 6.5 mg/l in sedentary horse serum and rabbit plasma to a minimum of 4 mg/l in dog serum and sedentary horse plasma. Statistically significant differences in total GAG concentrations (P < 0.0005) were found in horses between plasma and serum and also between sedentary and trained subjects. Chondroitin sulphate was the main component in serum and plasma GAG mixtures, accounting for 81–84% of total GAGs in the examined animals, except in cow serum (72%), trained horse plasma (75.5%) and sheep serum (87%). Keratan sulphate-like structures, measured as galactose, ranged from 12% in sheep serum to 17% in cattle serum. Fucose was associated with galactose in GAG fractions, which supports the hypothesis that articular cartilage is among the sites of origin of circulating GAGs.