Reproductive synchrony in a recovering bottlenecked sea turtle population

1. The assessment of species extinction risk has been well established for some time now. Assessing the potential for recovery in endangered species is however much more challenging, because complementary approaches are required to detect reliable signals of positive trends. 2. This study combines genetics, demography and behavioural data at three different time-scales to assess historical and recent population changes and evidence of reproductive synchrony in a small population of olive ridley sea turtle Lepidochelys olivacea. Lepidochelys is considered as the most extraordinary example of reproductive synchrony in reptiles, yet to date, it has only been reported in large populations. 3. Using Bayesian coalescent-based models on microsatellite nuclear DNA variability, we demonstrate that effective population size in olive ridleys nesting in French Guiana has dramatically declined by 99% over the last 20 centuries. This low current population size is further illustrated by the absence of genetic mitochondrial DNA diversity in the present nesting population. Yet, monitoring of nesting sites in French Guiana suggests a possible recovery of the population over the last decade. 4. Satellite telemetry shows that over the first 14 days of their 28-days inter-nesting interval, i.e. when eggs maturation is likely to occur, gravid females disperse over the continental shelf. They then gather together with a striking spatiotemporal consistency close to the nesting site, where they later emerge for their second nesting event. 5. Our results therefore suggest that reproductive synchrony also occurs in small populations. Olive ridleys may ensure this synchrony by adjusting the duration of the second half of their inter-nesting interval prior to landing, possibly through social mediation. 6. Such reproductive synchrony may be related to the maintenance of some species-specific strategy despite former collapse and may contribute to the present population recovery. The gregarious behaviour of reproductive individuals close to shore where human-induced perturbations occur is however a cause for conservation concern for this still poorly known species.     

Earlier nesting by loggerhead sea turtles following sea surface warming

The onset of spring, noted by the timing of wildlife migratory and breeding behaviors, has been occurring earlier over the past few decades. Here, we examine 15 years of loggerhead sea turtle, Caretta caretta, nesting patterns along a 40.5 km beach on Florida's Atlantic coast. This small section of beach is considered to be the most important nesting area for this threatened species in the western hemisphere. From 1989 to 2003, the annual number of nests fluctuated between 13 000 and 25 000 without a conspicuous trend; however, based on a regression analysis, the median nesting date became earlier by roughly 10 days. The Julian day of median nesting was significantly correlated with near‐shore, May sea surface temperatures that warmed an average of 0.8°C over this period. This marine example from warm temperate/subtropical waters represents another response of nature to recent climate trends.     

Climate change‐related regime shifts have altered spatial synchrony of plankton dynamics in the North Sea

During the 1980s, the North Sea plankton community underwent a well‐documented ecosystem regime shift, including both spatial changes (northward species range shifts) and temporal changes (increases in the total abundances of warmer water species). This regime shift has been attributed to climate change. Plankton provide a link between climate and higher trophic‐level organisms, which can forage on large spatial and temporal scales. It is therefore important to understand not only whether climate change affects purely spatial or temporal aspects of plankton dynamics, but also whether it affects spatiotemporal aspects such as metapopulation synchrony. If plankton synchrony is altered, higher trophic‐level feeding patterns may be modified. A second motivation for investigating changes in synchrony is that the possibility of such alterations has been examined for few organisms, in spite of the fact that synchrony is ubiquitous and of major importance in ecology. This study uses correlation coefficients and spectral analysis to investigate whether synchrony changed between the periods 1959–1980 and 1989–2010. Twenty‐three plankton taxa, sea surface temperature (SST), and wind speed were examined. Results revealed that synchrony in SST and plankton was altered. Changes were idiosyncratic, and were not explained by changes in abundance. Changes in the synchrony of Calanus helgolandicus and Para‐pseudocalanus spp appeared to be driven by changes in SST synchrony. This study is one of few to document alterations of synchrony and climate‐change impacts on synchrony. We discuss why climate‐change impacts on synchrony may well be more common and consequential than previously recognized.     

Temporal patterns in adult salmon migration timing across southeast Alaska

Pacific salmon migration timing can drive population productivity, ecosystem dynamics, and human harvest. Nevertheless, little is known about long‐term variation in salmon migration timing for multiple species across broad regions. We used long‐term data for five Pacific salmon species throughout rapidly warming southeast Alaska to describe long‐term changes in salmon migration timing, interannual phenological synchrony, relationships between climatic variation and migratory timing, and to test whether long‐term changes in migration timing are related to glaciation in headwater streams. Temporal changes in the median date of salmon migration timing varied widely across species. Most sockeye populations are migrating later over time (11 of 14), but pink, chum, and especially coho populations are migrating earlier than they did historically (16 of 19 combined). Temporal trends in duration and interannual variation in migration timing were highly variable across species and populations. The greatest temporal shifts in the median date of migration timing were correlated with decreases in the duration of migration timing, suggestive of a loss of phenotypic variation due to natural selection. Pairwise interannual correlations in migration timing varied widely but were generally positive, providing evidence for weak region‐wide phenological synchrony. This synchrony is likely a function of climatic variation, as interannual variation in migration timing was related to climatic phenomenon operating at large‐ (Pacific decadal oscillation), moderate‐ (sea surface temperature), and local‐scales (precipitation). Surprisingly, the presence or the absence of glaciers within a watershed was unrelated to long‐term shifts in phenology. Overall, there was extensive heterogeneity in long‐term patterns of migration timing throughout this climatically and geographically complex region, highlighting that future climatic change will likely have widely divergent impacts on salmon migration timing. Although salmon phenological diversity will complicate future predictions of migration timing, this variation likely acts as a major contributor to population and ecosystem resiliency in southeast Alaska.     

Dispersal-induced desynchronization: from metapopulations to metacommunities

The conceptualization of fragmented populations in terms of metapopulation theory has become standard over the last three decades. It is well known that increases in between‐patch migration rates cause more synchronous population fluctuations and that this coherence increases the risk of global metapopulation extinction. Because species’ migration rates and the probability of individuals surviving migration events depend on the effective distance between patches, the benefit of improving conservation corridors or the matrix between habitat patches has been questioned. As populations occur in the context of larger communities, moving from a metapopulation to a metacommunity model framework is a natural extension to address the generality of these conclusions. We show how considering a metacommunity can modify the conclusion that decreasing the effective distance between habitat patches (via improving matrix quality or other measures) necessarily increases the degree of metapopulation synchrony. We show that decreases in effective between‐patch distance may deter population synchrony because of the simultaneous effect this change has on the migration patterns of other species. These results indicate that species interactions need to be considered when the effect of conservation measures on population synchrony, and ultimately persistence, is addressed.     

Dispersal and spatial scale affect synchrony in spatial population dynamics

A large body of theoretical studies has shown that synchrony among populations is critical for the long-term persistence of species in fragmented habitats. Although the effects of dispersal and environmental factors on synchrony have been investigated theoretically, empirical studies of these relationships have been lacking. We explored the interplay between environmental and demographic factors (fecundity, survival, dispersal) on population synchrony for 53 species of birds. We show that the interspecific differences in mean synchrony were determined by global environmental factors whose action was probably mediated by the abundance of each species. After removing the effect of these global factors on synchrony, the residual synchrony was strongly correlated with dispersal distance. The relationship between dispersal and synchrony was stronger for the species nesting in wet habitats than for those nesting in dry habitats. Our results indicate that different factors synchronize bird populations at different spatial scales, thus highlighting the role of scale in understanding spatial population dynamics and extinction risks.     

Experimental manipulation of timing of breeding suggests laying order instead of breeding synchrony affects extra-pair paternity in house sparrows

The timing of breeding may not only affect breeding patterns such as the overlap of chick rearing period with the peak in food availability but also the opportunity for extra-pair mating. A negative relationship has been predicted between extra-pair paternity and breeding synchrony, assuming that male extra-pair activity is traded against mate guarding and parenting duties. In contrast, if female ability to assess male quality is temporally constrained, sperm competition might be a positive function of breeding synchrony. Here we manipulated the progress of nesting by nest material exchange within nesting aggregations to see whether the timing of breeding affects extra-pair paternity in house sparrows. We found that late broods within nesting clusters contained extra-pair young more often than early broods, but breeding synchrony did not turn out to be a significant predictor of extra-pair paternity. Our study indicates that temporal constraints of male extra-pair activity may account for extra-pair paternity levels, but it is also possible that late-breeding females may accept extra-pair copulations to ensure egg fertilization.     

Modeling the emergence of migratory corridors and foraging hot spots of the green sea turtle

Environmental factors shape the spatial distribution and dynamics of populations. Understanding how these factors interact with movement behavior is critical for efficient conservation, in particular for migratory species. Adult female green sea turtles, Chelonia mydas, migrate between foraging and nesting sites that are generally separated by thousands of kilometers. As an emblematic endangered species, green turtles have been intensively studied, with a focus on nesting, migration, and foraging. Nevertheless, few attempts integrated these behaviors and their trade‐offs by considering the spatial configurations of foraging and nesting grounds as well as environmental heterogeneity like oceanic currents and food distribution. We developed an individual‐based model to investigate the impact of local environmental conditions on emerging migratory corridors and reproductive output and to thereby identify conservation priority sites. The model integrates movement, nesting, and foraging behavior. Despite being largely conceptual, the model captured realistic movement patterns which confirm field studies. The spatial distribution of migratory corridors and foraging hot spots was mostly constrained by features of the regional landscape, such as nesting site locations, distribution of feeding patches, and oceanic currents. These constraints also explained the mixing patterns in regional forager communities. By implementing alternative decision strategies of the turtles, we found that foraging site fidelity and nesting investment, two characteristics of green turtles' biology, are favorable strategies under unpredictable environmental conditions affecting their habitats. Based on our results, we propose specific guidelines for the regional conservation of green turtles as well as future research suggestions advancing spatial ecology of sea turtles. Being implemented in an easy to learn open‐source software, our model can coevolve with the collection and analysis of new data on energy budget and movement into a generic tool for sea turtle research and conservation. Our modeling approach could also be useful for supporting the conservation of other migratory marine animals.     

Relationship between tropical cyclones and the distribution of sea turtle nesting grounds

Aim This study examines the relationship between the distribution of existing sea turtle nesting sites and historical patterns of tropical cyclone events to investigate whether cyclones influence the current distribution of sea turtle nesting sites. The results, together with information on predicted cyclone activity and other key environmental variables, will help in the identification and prediction of future nesting sites for sea turtles as changes to the coastal environment continue. Location Queensland, Australia. Methods We used data on the nesting distribution of seven populations of four species of sea turtles [green (Chelonia mydas), flatback (Natator depressus), hawksbill (Eretmochelys imbricata) and loggerhead (Caretta caretta)] from the eastern Queensland coast, and tropical cyclone track data from 1969 to 2007 to explore the relationship between (1) sea turtle nesting phenology and cyclone season, and (2) sea turtle nesting sites and cyclone distribution. Furthermore, using two green turtle populations as a case study, we investigated the relationship between cyclone disturbance and sea turtle reproductive output, nesting site and season. Bootstrapping was used to explore if current sea turtle nesting sites are located in areas with lower or higher cyclone frequency than areas where turtles are currently not nesting. Results All populations of sea turtles studied here were disturbed by cyclone activity during the study period. The exposure (frequency) of tropical cyclones that crossed each nesting site varied greatly among and within the various sea turtle populations. This was mainly a result of the spatial distribution of each population’s nesting sites. Bootstrapping indicated that nesting sites generally have experienced lower cyclone activity than other areas that are available for nesting. Main conclusions Tropical cyclones might have been sufficiently detrimental to sea turtle hatching success on the eastern Queensland coast that through a natural selection process turtles in this region are now nesting in areas with lower cyclone activity. Therefore, it is important that future studies that predict climate or range shifts for sea turtle nesting distributions consider future cyclone activity as one of the variables in their model.     

Using historical data to assess the biogeography of population recovery

Historical ecology research is valuable for assessing long‐term baselines, and is increasingly applicable to conservation and management. In this study, we describe how historical range data can inform key aspects of protected species management, including evaluating conservation status and recovery, and determining practical management units. We examine contemporary (1973–2012) and historical (1250–1950) data on nesting beach distributions for green sea turtles Chelonia mydas in the Hawaiian Islands. Green turtle populations in Hawai‘i declined until federal and international protections began in the 1970s, but over the past four decades one index population has shown encouraging increases and broader recovery has been inferred. We find that 80% of historically major nesting populations are extirpated, or have heavily reduced nesting abundances in comparison with current estimates. Furthermore, historical nesting areas were not geographically isolated, but distributed across the archipelago. In comparison, today more than 90% of green turtle nesting in Hawai‘i occurs at a single site that is vulnerable to sea level rise. This research suggests that assessing recovery without historical data on spatial patterns may overlook important ecological dynamics at the popu lation or ecosystem level, which can result in improper or inadequate conservation assessments and recovery targets.     

Are goose nesting success and lemming cycles linked? Interplay between nest density and predators

The suggested link between lemming cycles and reproductive success of arctic birds is caused by potential effects of varying predation pressure (the Alternative Prey Hypothesis, APH) and protective association with birds of prey (the Nesting Association Hypothesis, NAH). We used data collected over two complete lemming cycles to investigate how fluctuations in lemming density were associated with nesting success of greater snow geese ( Anser caerulescens atlanticus ) in the Canadian High Arctic. We tested predictions of the APH and NAH for geese breeding at low and high densities. Goose nesting success varied from 22% to 91% between years and the main egg predator was the arctic fox ( Alopex lagopus ). Nesting associations with snowy owls ( Nyctea scandiaca ) were observed but only during peak lemming years for geese nesting at low density. Goose nesting success declined as distance from owls increased and reached a plateau at 550 m. Artificial nest experiments indicated that owls can exclude predators from the vicinity of their nests and thus reduce goose egg predation rate. Annual nest failure rate was negatively associated with rodent abundance and was generally highest in low lemming years. This relationship was present even after excluding goose nests under the protective influence of owls. However, nest failure was inversely density-dependent at high breeding density. Thus, annual variations in nest density influenced the synchrony between lemming cycles and oscillations in nesting success. Our results suggest that APH is the main mechanism linking lemming cycles and goose nesting success and that nesting associations during peak lemming years (NAH) can enhance this positive link at the local level. The study also shows that breeding strategies used by birds (the alternative prey) could affect the synchrony between oscillations in avian reproductive success and rodent cycles.     

Nesting Phenology of Marine Turtles: Insights from a Regional Comparative Analysis on Green Turtle (Chelonia mydas)

Changes in phenology, the timing of seasonal activities, are among the most frequently observed responses to environmental disturbances and in marine species are known to occur in response to climate changes that directly affects ocean temperature, biogeochemical composition and sea level. We examined nesting seasonality data from long-term studies at 8 green turtle (Chelonia mydas) rookeries that include 21 specific nesting sites in the South-West Indian Ocean (SWIO). We demonstrated that temperature drives patterns of nesting seasonality at the regional scale. We found a significant correlation between mean annual Sea Surface Temperature (SST) and dates of peak nesting with rookeries exposed to higher SST having a delayed nesting peak. This supports the hypothesis that temperature is the main factor determining peak nesting dates. We also demonstrated a spatial synchrony in nesting activity amongst multiple rookeries in the northern part of the SWIO (Aldabra, Glorieuses, Mohéli, Mayotte) but not with the eastern and southern rookeries (Europa, Tromelin), differences which could be attributed to females with sharply different adult foraging conditions. However, we did not detect a temporal trend in the nesting peak date over the study period or an inter-annual relation between nesting peak date and SST. The findings of our study provide a better understanding of the processes that drive marine species phenology. The findings will also help to predict their ability to cope with climate change and other environmental perturbations. Despite demonstrating this spatial shift in nesting phenology, no trend in the alteration of nesting dates over more than 20 years was found.     

Conspecific attraction and nest site selection in a nomadic species,the zebra finch

Conspecific nesting density affects many aspects of breeding biology, as well as habitat selection decisions. However, the large variations in breeding density observed in many species are yet to be fully explained. Here, we investigated the settlement patterns in a colonial species with variable breeding density and where resource distribution could be manipulated. The zebra finch, Taeniopygia guttata, is a classic avian model in evolutionary biology but we know surprisingly very little about nest site selection strategies and nesting densities in this species, and in fact, in nomadic species in general. Yet, important determinants of habitat selection strategies, including temporal predictability and breeding synchrony, are likely to be different in nomadic species than in the non‐nomadic species studied to date. Here, we manipulated the distribution of nesting sites (by providing nest boxes) and food patches (feeders) to test four non‐exclusive habitat selection hypotheses that could lead to nest aggregation: 1) attraction to resources, 2) attraction to breeding conspecifics, and 3) attraction to successful conspecifics and 4) use of private information (i.e. own reproductive success on a site). We found that wild zebra finches used conspecific presence and possibly reproductive success, to make decisions over where to locate their nests, but did not aggregate around water or food within the study areas. Moreover, there was a high degree of inter‐individual variation in nesting density preference. We discuss the significance of our results for habitat selection strategy in nomadic species and with respect to the differential selection pressures that individuals breeding at different densities may experience.     

Effect of breeding performance on the distribution and activity budgets of a predominantly resident population of black‐browed albatrosses

Pelagic seabirds breeding at high latitudes generally split their annual cycle between reproduction, migration, and wintering. During the breeding season, they are constrained in their foraging range due to reproduction while during winter months, and they often undertake long‐distance migrations. Black‐browed albatrosses (Thalassarche melanophris) nesting in the Falkland archipelago remain within 700 km from their breeding colonies all year‐round and can therefore be considered as resident. Accordingly, at‐sea activity patterns are expected to be adjusted to the absence of migration. Likewise, breeding performance is expected to affect foraging, flying, and floating activities, as failed individuals are relieved from reproduction earlier than successful ones. Using geolocators coupled with a saltwater immersion sensor, we detailed the spatial distribution and temporal dynamics of at‐sea activity budgets of successful and failed breeding black‐browed albatrosses nesting in New Island, Falklands archipelago, over the breeding and subsequent nonbreeding season. The 90% monthly kernel distribution of failed and successful breeders suggested no spatial segregation. Both groups followed the same dynamics of foraging effort both during daylight and darkness all year, except during chick‐rearing, when successful breeders foraged more intensively. Failed and successful breeders started decreasing flying activities during daylight at the same time, 2–3 weeks after hatching period, but failed breeders reached their maximum floating activity during late chick‐rearing, 2 months before successful breeders. Moon cycle had a significant effect on activity budgets during darkness, with individuals generally more active during full moon. Our results highlight that successful breeders buffer potential reproductive costs during the nonbreeding season, and this provides a better understanding of how individuals adjust their spatial distribution and activity budgets according to their breeding performance in absence of migration.     

Spatial synchrony in stream fish populations: influence of species traits

Spatial synchrony in population dynamics has been identified in most taxonomic groups. Numerous studies have reported varying levels of spatial synchrony among closely‐related species, suggesting that species' characteristics may play a role in determining the level of synchrony. However, few studies have attempted to relate this synchrony to the ecological characteristics and/or life‐history traits of species. Yet, as to some extent the extinction risk may be related to synchrony patterns, identifying a link between species' characteristics and spatial synchrony is crucial, and would help us to define effective conservation planning. Here, we investigated whether species attributes and temperature synchrony (i.e. a proxy of the Moran effect) account for the differences in spatial population synchrony observed in 27 stream fish species in France. After measuring and testing the level of synchrony for each species, we performed a comparative analysis to detect the phylogenetic signal of these levels, and to construct various multi‐predictor models with species traits and temperature synchrony as covariates, while taking phylogenetic relatedness into account. We then performed model averaging on selected models to take model uncertainty into account in our parameter estimates. Fifteen of the 27 species displayed a significant level of synchrony. Synchrony was weak, but highly variable between species, and was not conserved across the phylogeny. We found that some species' characteristics significantly influenced synchrony levels. Indeed, the average model indicated that species associated with greater dispersal abilities, lower thermal tolerance, and opportunistic strategy displayed a higher degree of synchrony. These findings indicate that phylogeny and spatial temperature synchrony do not provide information pertinent for explaining the variations in species' synchrony levels, whereas the dispersal abilities, the life‐history strategies and the upper thermal tolerance limits of species do appear to be quite reliable predictors of synchrony levels.     

Reproductive Coordination in a Nonseasonally Breeding Primate Species,Macaca silenus

Varying types of reproductive coordination among females have been described for several mammals. Among nonhuman primates, female reproductive coordination has usually been described as breeding seasonality, or in few cases, closer synchrony within the breeding or birth season. We examined birth records from a large captive colony of lion-tailed macaques, Macaca silenus, a nonseasonally breeding species, in order to determine the degree of female reproductive synchrony in this population. Births were nonrandomly distributed over the 10-year study period. Of the total of 28 births, the majority (21 or 75 %) of births occurred in cohorts, in spite of wide variations in interbirth intervals among cohort birth mothers. Cohorts consisted of two to five infants born within a 90-d period or less. Of the remaining 7 “isolated” births, four were in the three years in which only one or two births occurred. The pattern of cohort births was nonrandomly distributed according to mother's parity: three of the isolated births were to primiparous mothers, whereas only one of the 21 cohort births was to a primiparous mother. Estrous synchrony results showed that females in the longer-established of two groups exhibited greater synchrony, suggesting social facilitation of reproductive coordination. It is thus suggested that synchrony in this sample was the result of social rather than ecological mechanisms, as has been hypothesized for some other mammalian species.     

Breeding synchrony and spawning intervals in the temperate damselfishChromis notata

Synopsis The reproductive behavior of damselfish,Chromis notata, was studied at Mukaishima Island, Seto Inland Sea of Japan. Spawning occur synchronously among the fish in the study area except during a part of the breeding season. Neither spawnings nor hatchings, however, coincide with any particular phase of the lunar or tidal cycle. The intervals between the spawning peaks vary considerably during the breeding season. These results support the hypothesis that synchrony of breeding is facilitated by social interactions among the fish of a local area. The male inter-spawning intervals, and even the intervals between last spawning and next nesting, are longer than the female inter-spawning intervals in the beginning of breeding season. This delay of male spawning is attributed to the long incubation period and may have an influence on the male reproductive success.     

Dispersal and Diving Adjustments of the Green Turtle Chelonia mydas in Response to Dynamic Environmental Conditions during Post-Nesting Migration

In response to seasonality and spatial segregation of resources, sea turtles undertake long journeys between their nesting sites and foraging grounds. While satellite tracking has made it possible to outline their migration routes, we still have little knowledge of how they select their foraging grounds and adapt their migration to dynamic environmental conditions. Here, we analyzed the trajectories and diving behavior of 19 adult green turtles (Chelonia mydas) during their post-nesting migration from French Guiana and Suriname to their foraging grounds off the coast of Brazil. First Passage Time analysis was used to identify foraging areas located off Ceará state of Brazil, where the associated habitat corresponds to favorable conditions for seagrass growth, i.e. clear and shallow waters. The dispersal and diving patterns of the turtles revealed several behavioral adaptations to the strong hydrodynamic processes induced by both the North Brazil current and the Amazon River plume. All green turtles migrated south-eastward after the nesting season, confirming that they coped with the strong counter North Brazil current by using a tight corridor close to the shore. The time spent within the Amazon plume also altered the location of their feeding habitats as the longer individuals stayed within the plume, the sooner they initiated foraging. The green turtles performed deeper and shorter dives while crossing the mouth of the Amazon, a strategy which would help turtles avoid the most turbulent upper surface layers of the plume. These adjustments reveal the remarkable plasticity of this green turtle population when reducing energy costs induced by migration.