Dynamics of potentially harmful microalgae in a confined Mediterranean Gulf—Assessing the risk of bloom formation

The population dynamics of potentially harmful microalgae was investigated in the semi-enclosed shallow Gulf of Kalloni, Greece (Aegean Sea, Eastern Mediterranean), during a 2-year period from August 2004 to March 2006. A total of 21 potentially harmful microalgae (bloom-forming and/or toxic) were identified including 3 diatoms and 18 dinoflagellates. The densities of each species were analyzed in time and space and in relation to environmental parameters. Some species such as Alexandrium insuetum, Heterocapsa circularisquama, Karlodinium veneficum, Scrippsiella trochoidea, and Ceratium spp. developed high cell concentrations, particularly during a Pseudo-nitzschia calliantha winter bloom. Other species such as Dinophysis caudata, Ostreopsis ovata, Prorocentrum minimum, and Protoperidinium crassipes were rare or appeared in small numbers. Densities of the most abundant species were closely associated with freshwater nutrient-rich inputs during winter, being negatively correlated with temperature and salinity and positively correlated with nitrogen. The spatial distribution of the abundant species exhibited a marked increase towards the inner part of the gulf, close to the main freshwater inputs, whereas some species were mainly concentrated in the dilute surface layer (1 m depth). Examination of the abundance–occupancy relationship revealed that the species more prone to bloom are those with wide spatial distribution and frequent presence throughout the year such as the diatom P. calliantha. Although blooms of cyst-forming species are rarer, an increased risk can be foreseen under favorable resource supply and environmental conditions during winter.     

Proposal of Microsquama subgen. nov. for Nephroselmis pyriformis (Carter) Ettl (Nephroselmidophyceae,Chlorophyta)

A new subgenus, Microsquama, is proposed for Nephroselmis pyriformis based on its phylogenetic position and some ultrastructural characters, such as the absence of large stellate scales. Other species of the genus are classified in the subgenus Nephroselmis.     

Diatom life cycles and ecology in the Cretaceous

The earliest known diatom fossils with well‐preserved siliceous frustules are from Lower Cretaceous neritic marine deposits in Antarctica. In this study, we analyzed the cell wall structure to establish whether their cell and life cycles were similar to modern forms. At least two filamentous species (Basilicostephanus ornatus and Archepyrgus melosiroides) had girdle band structures that functioned during cell division in a similar way to present day Aulacoseira species. Also, size analyses of cell diameter indicated that the cyclic process of size decline and size restoration used to time modern diatom life cycles was present in five species from the Lower Cretaceous (B. ornatus, A. melosiroides, Gladius antiquus, Ancylopyrgus reticulatus, Kreagra forfex) as well as two species from Upper Cretaceous deposits (Trinacria anissimowii and Eunotogramma fueloepi) from the Southwest Pacific. The results indicate that the “Diatom Sex Clock” was present from an early evolutionary stage. Other ecological adaptations included changes in mantle height and coiling. Overall, the results suggest that at least some of the species in these early assemblages are on a direct ancestral line to modern forms.     

新疆饼干衣属地衣分类学研究

该研究以采自新疆的100余份饼干衣属(Rinodina)地衣标本为研究材料,通过形态解剖特征观察、地衣化学成分分析以及分子生物学鉴定方法鉴定出9个种,包括2个中国新记录种——阿富汗饼干衣(Rinodina afghanica)和古氏饼干衣(Rinodina guzzinii),7个常见种分别是：包氏饼干衣(R. bohlinii)、毕氏饼干衣(R. bischoffii)、代谢饼干衣(R. metaboliza)、密果饼干衣(R. pycnocarpa)、特雷氏饼干衣(R. trevisanii)、甘肃饼干衣(R. straussii)和地生饼干衣(R. terrestris)。并提供了新疆饼干衣属地衣的分种检索表、每个物种的详细描述、新记录种的特征图片以及系统发育分析。     

Seasonal variations in the diversity,abundance, and composition of species in an estuarine fish community in the Tropical Eastern Pacific,Mexico

The ichthyofauna of the Chacahua Lagoon in the western Oaxaca State of Mexico was sampled every 2 months, using a trawl net over seven sampling cycles. The estuary mouth closed in late January, generating hypersaline conditions in the system. A total of 33 species belonging to 20 families were recorded; most of them marine species, showing tropical and subtropical affinities. The most abundant species were Diapterus peruvianus, Centropomus robalito, Anchovia macrolepidota, Lile stolifera, and Lutjanus novemfasciatus. Total fish abundance and species richness were not significantly affected by the mouth closing, and this was related to the presence of a permanently open entrance channel with an adjacent lagoon, which allowed easy exchange of fish between these two systems. Canonical correspondence analysis (CCA) revealed that salinity and dissolved oxygen were the most important environmental variables in determining the observed variability in fish community composition. Two fish groups were evident: the fish assemblage of the low-salinity period (open-mouth phase), in which Eucinostomus currani, Sciades guatemalensis, Centropomus armatus, Citharichthys stigmaeus, and Caranx caninus constituted the majority of the catch; and the fish assemblage of the high-salinity period (closed-mouth phase), with A. macrolepidota, L. stolifera, and Harengula thrissina as the most abundant species. Multivariate analyses showed differences in the composition of the fish community between both periods. Other species, such as the permanent residents D. peruvianus and C. robalito, which showed the widest range in tolerance of ambient salinity, were caught during both periods. Seasonal succession of fish populations may be related to differences in life cycle and tolerance of the environment among those species adapting to ecological conditions.     

Survey of soil fungi from the Sudan Gezira

One hundred and twenty sites, from six localities from the Sudan Gezira were examined for soil mycoflora. The lower fungi were mostly represented by mucoraceous genera, such as Rhizopus, Mucor and Cunninghamella. Oomycetes were rare. Ascomycetes, other than the perfect states of Aspergillus, were not common. Only Chaetomium globosum was isolated from the six localities. Monascus, Thermoascus, Neocosmospora and Pyronema were recorded for the first time from Sudanese soils. The majority of the isolates were Hyphomycetes. The bulk of the fungal population were species of Aspergillus, of which A. niger was the most common, followed by A. terreus, A. flavus, A. nidulans and A. fumigatus. Other Aspergilli were sporadic. A. niveus and A. sejunctus were not previously reported from Sudanese soil.     

Zooplankton Distribution in Tropical Reservoirs,South China

The zooplankton of 18 reservoirs of South China was investigated in 2000. 61 Rotifera species, 23 Cladoceras and 14 Copepodas were identified. The most frequent Rotifera genera were Keratella, Brachionus, Trichocerca, Diurella, Ascomorpha, Polyarthra, Ploesoma, Asplanchna, Pompholyx and Conochilus. Bosmina longirostris, Bosminopsis deitersi, Diaphanosoma birgei, D. brachyurum and Moina micrura were typical of Cladocera in the reservoirs. Phyllodiaptomus tunguidus, Neodiaptomus schmackeri and Mesocyclops leuckarti were the most frequent Copepoda and M. leuckarti dominated Copepoda in most reservoirs. High zooplankton species richness with low abundance was characteristic of the throughflowing reservoir, whereas low species richness with low abundance was found in the reservoir with the longest retention time. Relative high abundance and medium species diversity were the distinction of intermediate retention time reservoirs.     

Biochemical differences between embryogenic and nonembryogenic calli of conifers

Summary Embryogenic and nonembryogenic calli of loblolly pine (Pinus taeda), Eastern white pine (P. strobus), pond pine (P. serotina), white spruce (Picea glauca), and European larch (Larix decidua) were analyzed for biochemical parameters previously shown to be indicative of an embryogenic state in Norway spruce (Picea abies). Concentrations of glutathione and total reductants as well as rates of ethylene evolution and incorporation of radioactive leucine into protein in the two callus types were consistent with the Norway spruce observations. Embryogenic potential of loblolly pine and pond pine callus was predicted by biochemical analysis in advance of the appearance of somatic embryos. Other parameters such as isozyme patterns and SDS-PAGE of soluble proteins could also be used to distinguish embryogenic from nonembryogenic conifer callus. Among the species investigated, white spruce was the most difficult to sort by these methods.     

Determination of Pseudomonas aeruginosa by Biochemical Test Methods

A rapid and simple test method for the detection of acylamidase activity of Pseudomonas aeruginosa was devised. One loopful of a nutrient agar overnight culture of a test organism was inoculated into 1 ml of a test medium consisting of 0.2% KH₂PO₄, 0.01% MgSO₄·7H₂O, 0.5% NaCl and 0.1% acetamide (final pH 6.8). After aerobic incubation at 37C for 6 hr, one drop of Nessler's reagent was dropped into the test medium. A reddish-brown sediment appeared immediately if results were positive. Of 40 test strains of P. aeruginosa 39 gave strongly positive results. A strain showed a weakly positive result after 6 hr incubation, but the reaction became stronger after 18 hr culture. Other species of Pseudomonas, and various species of bacteria such as genera Vibrio and Aeromonas, and family Enterobacteriaceae were negative in this test. From these experimental results, the acylamidase test was considered to be highly specific for strains of P. aeruginosa, and therefore useful as a reliable method for the identification of this species.     

广东中山地区气单胞菌环境株的分离、鉴定及系统发生关系

从广东省中山市的池塘水样、底泥、健康鱼、肠道及稻田土样中用Aeromonas的选择培养基分离到10株气单胞菌。通过生理生化测试、16S rDNA序列测定、与气单胞菌典型菌株的16S rDNA序列进行比对和聚类分析,对它们进行了鉴定,并研究了它们之间的系统发生关系。结果显示该地区环境中气单胞菌的优势种除A. hydrophila（HG1组）外, 还有A. caviae（HG4组）、A. jandaei(HG9组)和A. veronii(HG10组),其中后两种是国内新记录。这是国内首次对环境中气单胞菌多样性进行研究。     

流溪河水库敞水区轮虫多样性与群落的动态特征

流溪河水库是位于北回归线上的大型峡谷型供水水库,于2013—2014年对该水库敞水区轮虫群落及其环境因子进行观测,分析敞水区轮虫多样性与群落动态特征。流溪河水库介于贫营养到中营养水平之间,丰水期(5月—9月)的总磷、透明度均高于枯水期(10月—4月),两年的总磷的平均值为0.019mg/L,透明度为2.55m。两年共检出轮虫40种,单月检出物种数波动范围为8—19种,月均检出轮虫13种。螺形龟甲轮虫、真翅多肢轮虫、沟痕泡轮虫和胶鞘轮虫是主要优势轮虫。2013、2014年轮虫年均总丰度分别为68.9、66.9个/L,两年物种丰富度在丰水期大于枯水期,但枯水期轮虫群落Simpson多样性指数均大于丰水期。采用Bray-Curtis距离测度群落之间的相异性,计算表明两年的枯水期轮虫群落之间的平均距离均大于丰水期,即丰水期时轮虫群落相似性较高,枯水期时轮虫群落变异较大。丰水期的水温和水质参数的变化相对稳定,种类的优势度更为明显,导致丰水期群落之间更为相似。主成分分析表明,无柄轮属、胶鞘轮属、多肢轮属、异尾轮属、泡轮属、晶囊轮属和皱甲轮属的主要种类的全年分布有较大的差异,而其余多数轮虫种类全年分布差异较小,反映了我国南亚热带地区水温全年变幅小,可维持较多的全年性种类共存。群落的方差解析与RDA分析表明,相对于生物与化学变量,物理环境变量主导了流溪河水库敞水区轮虫群落的变异,就单个变量而言,水温和食物是影响流溪河水库敞水区轮虫群落结构的重要因素,降雨则是影响轮虫群落结构变异的宏观因素。绝大多数轮虫为滤食性的,处于食物链底端,个体小、生活史短,轮虫群落在对环境因子变化的响应上与浮游植物具有相似性。     

What can dry reservoir sediments in a semi-arid region in Brazil tell us about cladocera?

A study of dry sediments in a semi-arid reservoir in northeast Brazil was undertaken. Eleven quadrants were sampled along a transect in the reservoir. Sediments were collected and transferred to distilled water in the laboratory where they were subsequently filtered through a 50 m mesh filter. Ecloded cladocerans were identified. Several species hatched in the laboratory, and were compared with the cladoceran community collected before the reservoir had dried out. In previous years, only Moina minuta, Diaphanosoma spinulosumand Alonella hamulata were found in the lake, each on a different sampling date. In the laboratory, however, other species like Macrothrix sp., Leydigia ipojucae, Latonopsis australis and Ceriodaphnia cornuta f. rigaudi hatched. We observed that those quadrants, which were located in higher parts of the reservoir, and had been dry for 13 years, contained species that appeared only in these quadrants. Thus, the sediments show that independently of the species actively present in the water column, sediments store species in diapause stages: an observation that should not be overlooked, especially in biodiversity studies.     

Comparative morphology of the venom apparatus in the braconid wasp subfamily Rogadinae (Insecta, Hymenoptera, Braconidae) and related taxa

Zaldivar‐River ó n, A., Areekul, B., Shaw, M. R. & Quicke, D. L. J. (2004). Comparative morphology of the venom apparatus in the braconid wasp subfamily Rogadinae (Insecta, Hymenoptera, Braconidae) and related taxa. —Zoologica Scripta, 33, 223–237. The morphology of the venom apparatus intima in representatives of 38 genera of the problematic braconid wasp subfamily Rogadinae and other cyclostome braconids was investigated and a preliminary phylogenetic analysis for the group was performed with the information obtained. Despite the limited number of characters, the data suggest several relationships at various taxonomic levels. The venom apparatus in the Clinocentrini and the Stiropiini is relatively unmodified and similar to that found in other genera previously placed within a broader concept of the Rogadinae (e.g. genera of Lysitermini, Pentatermini, Tetratermini, Hormiini) and also to that of the Betylobraconinae. The presence of a cone of filaments located inside the secondary venom duct near to its insertion on the venom reservoir/primary venom duct is proposed as a synapomorphy for the tribe Rogadini to the exclusion of Stiropiini, Clinocentrini and Yeliconini. Other features of the secondary venom duct and its insertion on the venom reservoir/primary venom duct support a number of relationships between the genera of the Rogadini and also within the large genus Aleiodes. A clade containing 15 Rogadini genera (Bathoteca, Bathotecoides, Bulborogas, Canalirogas, Colastomion, Conspinaria, Cystomastacoides, Macrostomion, Megarhogas, Myocron, Pholichora, Rectivena, Rogas, Spinaria and Triraphis) is supported by the presence of a thickened and short secondary venom duct, whereas the different members of Aleiodes (excluding members of the subgenus Heterogamus) and Cordylorhogas are distinguished by having a recessed secondary venom duct with well‐defined and numerous internal filaments. New World Rogas species exhibit a unique venom apparatus and may not be closely related to the Old World ones. Features of the venom apparatus of the enigmatic genus Telengaia and the exothecine genera Shawiana and Colastes suggest that the Telengainae and Exothecinae are both closely related to the Braconinae, Gnamptodontinae, and possibly to the Opiinae and Alysiinae. An unsculptured venom reservoir was found in one specimen of the type species of Avga, A. choaspes, which is consistent with it occupying either a very basal position within the cyclostome braconids or belonging to a recently recognized ‘Gondwanan’ clade that also includes the Aphidiinae.     

Comparison of quantitative gonad maturation scales in a temperate oyster (Crassostrea gigas) and a sub-tropical oyster (Crassostrea corteziensis)

Quantitative scales to evaluate maturity of female gonads were compared for a temperate oyster, Crassostrea gigas and a tropical oyster, Crassostrea corteziensis grown in the same locality. C. gigas had well-defined maturation and spawning periods and a resting phase in winter; in C. corteziensis mature individuals occurred most of the year and there were several spawning peaks. Of the quantitative scales used here, average oocyte diameter and gonad coverage area, much used for C. gigas, and ovary maturity index, less used, were inadequate to distinguish the reproductive pattern of C. corteziensis, since they both skewed the degree of maturation in vitellogenic stages in favor of C. gigas. Maximum oocyte diameter and maximum cytoplasm area were different among species at vitellogenic stages and also in previtellogenic stages. Nucleus:cytoplasm ratio was significantly different in previtellogenic and spawned stages between C. gigas and C. corteziensis. The Index of gonadal development was skewed in favor of C. gigas in postvitellogenic stage. The only scale that was comparable between species was reproductive potential, but it also was one of the most laborious. Other ordinal scales commonly used, such as a visual external evaluation of the gonad, only classified correctly a quarter of the stages.     

Analysis of interactions between the invasive tree-of-heaven (<Emphasis Type="Italic">Ailanthus altissima</Emphasis>) and the native black locust (<Emphasis Type="Italic">Robinia pseudoacacia</Emphasis>)

Invasive exotic plants can persist and successfully spread within ecosystems and negatively affect the recruitment of native species. The exotic invasive Ailanthus altissima and the native Robinia pseudoacacia are frequently found in disturbed sites and exhibit similar growth and reproductive characteristics, yet each has distinct functional roles such as allelopathy and nitrogen fixation, respectively. A four-month full additive series in the greenhouse was used to analyze the intraspecific and interspecific interference between these two species. In the greenhouse experiment, the inverse of the mean total biomass (g) response per plant for each species was regressed on the density of each species and revealed that the performance of the plants was significantly reduced by interspecific interference and not by intraspecific interference (p < 0.05). Other biomass traits such as root dry weight, shoot dry weight, stem dry weight, and leaf dry weight were also negatively affected by interspecific interference. Competition indices such as Relative Yield Total and Relative Crowding Coefficient suggested that A. altissima was the better competitor in mixed plantings. Ailanthus altissima consistently produced a larger above ground and below ground relative yield while R. pseudoacacia generated a larger aboveground relative yield in high density mixed species pots.     

Occurrence of arbuscular mycorrhizal fungi in bromeliad species from the tropical Atlantic forest biome in Brazil

The mycorrhizal status of epiphytic, rupicolous, and terrestrial bromeliad species from the Brazilian Atlantic Rain Forest has been examined. Roots of 13 species of bromeliads were analyzed for the presence of mycorrhizal structures such as arbuscules, hyphae, and vesicles as well as other fungal structures. Rhizosphere soil was sampled to identify arbuscular mycorrhizal fungal (AMF) species associated only with terrestrial bromeliad species. Most specimens collected were epiphytic bromeliads in the genera Aechmea, Bilbergia, Nidularium, Tillandsia, and Vriesea. Differentiating structures of AMF were found in only three species of bromeliads. The pattern of mycorrhizal colonization was mainly internal, and external mycelium and arbuscules were observed only in the terrestrial Nidularium procerum. Root endophytes with dark brown septate mycelium, thin external hyphae, and Rhizoctonia-like sclerotia were also detected in some root segments. A total of ten spore morphotypes were recovered from the rhizosphere of N. procerum, with Acaulospora mellea, A. foveata, and Glomus sp. being the most common species recovered. Our study demonstrated that most of the epiphytic species are not associated with AMF. We attribute this mainly to the exposed bare root conditions found in epiphytic bromeliads.     

Occurrence and distribution of <Emphasis Type="Italic">Microdochium nivale</Emphasis> and <Emphasis Type="Italic">Fusarium</Emphasis> species isolated from barley,durum and soft wheat grains in France from 2000 to 2002

Fusarium Head Blight of small grain cereal is a disease of growing concern in Europe. Along with Microdochium nivale, several species of Fusarium may be associated with the disease, including species that are potentially toxigenic. This paper describes the results of a large scale survey of the variety and frequency of different Fusarium species and M. nivale in France. A total of 749 soft wheat, durum wheat and barley samples were collected and analyzed from 2000 to 2002. The most frequent species isolated were F.graminearum, F. avenaceum and F. poae. The frequency of F. poae seems to have increased while M.nivale and F. culmorum appear less frequent than previously described in France. Other Fusarium species detected in decreasing prevalence were F. tricinctum, F. equiseti, F. acuminatum, F. sambucinum, F.sporotrichioides, F. moniliforme, F. heterosporum, F. subglutinans and F. oxysporum. All the most frequent pathogenic species and also the less pathogenic ones were frequently associated with individual fields. The implications of these associations for the protection of cereals crops and for contamination by mycotoxins are discussed.     

Tree Species Distribution along Environmental Gradients in an Area Affected by a Hydroelectric Dam in Southern Amazonia

We describe the patterns of composition and abundance of tree species and their relationships to environmental factors in an area affected by the Jirau hydroelectric dam on the Madeira River in the Brazilian state of Rondônia. Trees were sampled in 20 1‐ha forest plots distributed among areas affected and unaffected by the hydroelectric reservoir. Predictors of species distribution included in the analyses were soil fertility (sum of bases) and texture, slope, and the vertical distance from the nearest drainage. We sampled 8504 individuals belonging to 909 species/morphospecies. Floristic differences occurred throughout the reservoir area and between the sides of the river, and were strongly associated with edaphic and geological factors. The predictor with the greatest effect on the floristic changes was the sum of bases, coupled with the vertical distance from the nearest drainage, the latter reflecting the influence of the riparian zone. The forests sampled were heterogeneous and included transitional formations between unflooded terra firme and seasonally inundated (varzea, campinarana) forests. Although a considerable number of species (253) were restricted to plots affected by the reservoir, most of these species have a widespread distribution in the Amazon region. However, conservation measures are required in order to preserve species associations and ecosystems processes similar to those most affected by the reservoir such as the river floodplains. Our study reinforces the need to consider the heterogeneity of habitats affected by reservoirs when making decisions concerning the building of hydroelectric dams in the Amazon.     

Benthic Macroinvertebrates in the Watershed of an Urban Reservoir in Southeastern Brazil

The Ibirité watershed is subject to several forms of environmental degradation such as the presence of a petroleum refinery industry, urbanization of its surrounding landscape, and non treated domestic sewage from over 135,000 inhabitants. Benthic macroinvertebrates represent a useful tool in the evaluation of environmental quality through studies of the structure of communities and their relationship to anthropic activities within the watersheds. The objective of this study was to evaluate the environmental impact to the Ibirité reservoir caused by the petroleum refinery industry, urbanization, and sulphatation. Degradation of the watershed was measured by using the richness, diversity, evenness, and density of benthic macroinvertebrates. Twelve sampling stations were established as follows: five stations on Pintados and Ibirité streams (upstream from the reservoir), six in the reservoir and one station downstream from the reservoir. From 2002 to 2003, during both the dry and rainy seasons (in the tributaries) and the stratified and non-stratified periods (in the reservoir) were evaluated. A total of 289,777 organisms were collected and the most abundant organisms found in the streams were Oligochaeta (60%), Chironomidae (Chironomus, Goeldichironomus, Dicrotendipes, Cryptochironomus, Polypedilum, Parachironomus, Tanytarsus, Tribelos, Tanypus, Ablabesmyia, Cricotopus, Oliveriella) (38%) and Gastropoda (Biomphalaria straminea, Physa sp., Melanoides tuberculatus, Pomacea haustrum) (2%). In the reservoir, the most abundant specimens were Chaoboridae (46%) and Chironomidae larvae (Chironomus, Goeldichironomus, Tanypus, Coleotanypus, Labrundinia) (17%), in addition to Oligochaeta (24%) and Gastropoda (Melanoides tuberculatus) (13%). Evaluation of the structure and distribution of benthic communities showed a rapid environmental degradation process within the studied aquatic systems, in which low values of richness and diversity and high densities of tolerant organisms were observed. This environmental degradation is a result of the intense discharge of domestic sewage into the streams, reducing water quality and contributing to rapid artificial eutrophication.