Diversity of turtles across the cretaceous/tertiary boundary in Northeastern Montana

The abundant chelonian faunas of the Hell Creek and Tullock formations of McCone and Garfield counties, Montana, span the Cretaceous/Tertiary boundary and provide a basis for assessing extinction and changes in diversity. Over three thousand specimens were counted on a modified minimum number basis from 510 localities. The Lancian (Maastrichtian) part of the Hell Creek Formation contains at least 19 genera and subgenera of turtles and probably a greater but undetermined number of species and comprises the most diverse fossil turtle fauna known from a single rock unit. At least 15 generic level taxa survive into the Puercan (early Paleocene) part of the overlying Tullock Formation and only one new genus appears. The magnitude of the change in diversity across the Cretaceous/Tertiary boundary is less than or compaable to examples within the Tertiary and is readily explained by moderate ecological changes.     

Neogene Fallout Tuffs from the Yellowstone Hotspot in the Columbia Plateau Region,Oregon, Washington and Idaho,USA

Sedimentary sequences in the Columbia Plateau region of the Pacific Northwest ranging in age from 16–4 Ma contain fallout tuffs whose origins lie in volcanic centers of the Yellowstone hotspot in northwestern Nevada, eastern Oregon and the Snake River Plain in Idaho. Silicic volcanism began in the region contemporaneously with early eruptions of the Columbia River Basalt Group (CRBG), and the abundance of widespread fallout tuffs provides the opportunity to establish a tephrostratigrahic framework for the region. Sedimentary basins with volcaniclastic deposits also contain diverse assemblages of fauna and flora that were preserved during the Mid-Miocene Climatic Optimum, including Sucker Creek, Mascall, Latah, Virgin Valley and Trout Creek. Correlation of ashfall units establish that the lower Bully Creek Formation in eastern Oregon is contemporaneous with the Virgin Valley Formation, the Sucker Creek Formation, Oregon and Idaho, Trout Creek Formation, Oregon, and the Latah Formation in the Clearwater Embayment in Washington and Idaho. In addition, it can be established that the Trout Creek flora are younger than the Mascall and Latah flora. A tentative correlation of a fallout tuff from the Clarkia fossil beds, Idaho, with a pumice bed in the Bully Creek Formation places the remarkably well preserved Clarkia flora assemblage between the Mascall and Trout Creek flora. Large-volume supereruptions that originated between 11.8 and 10.1 Ma from the Bruneau-Jarbidge and Twin Falls volcanic centers of the Yellowstone hotspot in the central Snake River Plain deposited voluminous fallout tuffs in the Ellensberg Formation which forms sedimentary interbeds in the CRBG. These occurrences extend the known distribution of these fallout tuffs 500 km to the northwest of their source in the Snake River Plain. Heretofore, the distal products of these large eruptions had only been recognized to the east of their sources in the High Plains of Nebraska and Kansas.     

Limited sampling hampers “big data” estimation of species richness in a tropical biodiversity hotspot

Macro‐scale species richness studies often use museum specimens as their main source of information. However, such datasets are often strongly biased due to variation in sampling effort in space and time. These biases may strongly affect diversity estimates and may, thereby, obstruct solid inference on the underlying diversity drivers, as well as mislead conservation prioritization. In recent years, this has resulted in an increased focus on developing methods to correct for sampling bias. In this study, we use sample‐size‐correcting methods to examine patterns of tropical plant diversity in Ecuador, one of the most species‐rich and climatically heterogeneous biodiversity hotspots. Species richness estimates were calculated based on 205,735 georeferenced specimens of 15,788 species using the Margalef diversity index, the Chao estimator, the second‐order Jackknife and Bootstrapping resampling methods, and Hill numbers and rarefaction. Species richness was heavily correlated with sampling effort, and only rarefaction was able to remove this effect, and we recommend this method for estimation of species richness with “big data” collections.     

Expanded description of Leberis aenigmatosa Smirnov (Anomopoda: Chydoridae): a further indication of the biological isolation between western and eastern Australia

Continuing studies of 25 shallow lakes in the semi-desert of northwestern New South Wales during drier years revealed greater physicochemical extremes than previously recorded and wider fluctuations in salinity, even in less saline lakes. Earlier data on species composition and species richness were confirmed, with a few new species reported from either further field collections or the hatching of dried lake muds. A summer filling as against almost regular previous autumn-winter fillings made only a minor difference in faunas, though insects and phyllopods, for different reasons, were less prevalent in the drier years. The fauna of these inland saline lakes is not only biogeographically different from those in southern Australia, but is adapted to a more extreme and irregular environment. This revised version was published online in July 2006 with corrections to the Cover Date.     

Tenrec phylogeny and the noninvasive extraction of nuclear DNA

Due in part to scarcity of material, no published study has yet cladistically addressed the systematics of living and fossil Tenrecidae (Mammalia, Afrotheria). Using a noninvasive technique for sampling nuclear DNA from museum specimens, we investigate the evolution of the Tenrecidae and assess the extent to which tenrecids fit patterns of relationships proposed for other terrestrial mammals on Madagascar. Application of several tree-reconstruction techniques on sequences of the nuclear growth hormone receptor gene and morphological data for all recognized tenrecid genera supports monophyly of Malagasy tenrecids to the exclusion of the two living African genera. However, both parsimony and Bayesian methods favor a close relationship between fossil African tenrecs and the Malagasy Geogale, supporting the hypothesis of island paraphyly, but not polyphyly. More generally, the noninvasive extraction technique can be applied with minimal risk to rare/unique specimens and, by better utilizing museum collections for genetic work, can greatly mitigate field expenses and disturbance of natural populations.     

New Pennsylvanian (Moscovian) crinoids from the Qijiagou Formation,Taoshigo Valley,Xinjiang Uyghur Autonomous Region,Western China

New collections and revision of previously collected Moscovian crinoids from the Qijiagou Formation of the Taoshigo Valley near Turpan, Xinjiang Uyghur Autonomous Region, Western China, add to the generic diversity of the fauna. This camerate-rich echinoderm fauna is now recognized as containing at least one blastoid, five camerate, and ten cladid crinoid genera. The fauna shows greatest affinity at the family level with Moscovian crinoid faunas of Japan and North America.New taxa proposed are: Rhepocatillocrinus tianshanensis n. gen. n. sp.; Binariacrinus alveus n. gen. n. sp.; Bassocrinus abyssus n. gen. n. sp.; and Brabeocrinus asiaensis n. sp.     

Landscape heterogeneity and the confluence of regional faunas promote richness and structure community assemblage in a tropical biodiversity hotspot

Crane flies (Limoniidae; Limoniinae) were sampled at national parks and protected areas across central to northern Thailand to observe patterns of species richness and faunal turnover in the Indo-Burma biodiversity hotspot. Prior to sampling, the crane fly fauna of this region was poorly known and no taxonomic keys existed for specimen identification. Utilizing a multi-access taxonomic key to the Limoniinae genera of the Oriental Region designed for this project, identification of collected specimens revealed a crane fly fauna displaying higher richness than inventories from temperate regions. Sixty-six morphospecies from 29 genera/subgenera were collected using a combination of light trapping and Malaise trapping. Richness estimators projected that a total of 70–81 species are to be collected with future sampling, with mountainous northern Thailand projected to have the highest richness. The faunas of Central and Northern Thailand were different, with the north generally composed of more temperate genera and the south composed of more tropical genera. The increased diversity in northern Thailand was significantly influenced by landscape topology. Sampling that spread across two mountain ranges displayed faunas that were divided into both high elevation (>1,000 m) and lower elevation (<1,000 m) faunas. This change in community assemblage across elevation illustrates faunas that were more alike at similar elevations between mountain ranges than they were within national parks.     

Species diversity patterns in some present and prehistoric rodent communities

Summary Comparisons of prehistoric (A.D. 1100–1400) and extant cricetine-dominated rodent faunas from two locations in New Mexico and one in Arizona reveal temporal changes in both species diversity and taxonomic composition. The archaeological context of the prehistoric faunas permitted them to be dated rather accurately; paleoenvironmental inferences generated from other materials recovered in the excavations such as pollen samples, agricultural remains, and tree-ring specimens provided evidence about prehistoric environmental conditions in the study areas. Both richness and evenness components of diversity are lower in the present day faunas than in their prehistoric counterparts. At the beta (between-habitat or valley-wide) level of diversity the increased prehistoric species richness as well as the nature of the differences in present and prehistoric taxonomic composition can be accounted for by small climatic shifts which were occurring between A.D. 1100 and 1300 in the Southwest and the resultant biogeogrphic responses of certain rodent species. Alpha (or within-habitat) diversity is similar for all analyzed faunas. This suggests basic similarities in very local species packing despite observed spatial and temporal variation in valley-wide diversities. Environmental changes stemming from climatic shifts provide a reasonable explanation of the observed patterns of rodent species occurrence and diversity. Habitat destruction resulting from agricultural practies of prehistoric human populations appears to have had only a limited impact on these rodent communities.     

Effects of anthropogenic habitat disturbance on local pollinator diversity and species turnover across a precipitation gradient

Anthropogenic habitat disturbance can have profound effects on multiple components of forest biotas including pollinator assemblages. We assessed the effect of small-scale disturbance on local richness, abundance, diversity and evenness of insect pollinator fauna; and how habitat disturbance affected species turnover across the landscape and overall diversity along a precipitation gradient in NW Patagonia (Argentina). We evaluated the effect of disturbance on overall pollinator fauna and then separately for bees (i.e. Apoidea) and non-bee pollinators. Locally, disturbed habitats had significantly higher pollinator species richness and abundances than undisturbed habitats for the whole pollinator assemblage, but not for bees or non-bees separately. However, significant differences in species richness between habitats vanished after accounting for differences in abundance between habitat types. At a local scale Shannon–Weaver diversity and evenness did not vary with disturbance. A β diversity index indicated that, across forest types, species turnover was lower between disturbed habitats than between undisturbed habitats. In addition, rarefaction curves showed that disturbed habitats as a whole accumulated fewer species than undisturbed habitats at equivalent sample sizes. We concluded that small patches of disturbed habitat have a negligible effect on local pollinator diversity; however, habitat disturbance reduced β diversity through a homogenization of the pollinator fauna (in particular of bees) across the landscape.     

Negative relationships between species richness and evenness render common diversity indices inadequate for assessing long-term trends in butterfly diversity

Species richness and evenness, the two principle components of species diversity, are frequently used to describe variation in species assemblages in space and time. Compound indices, including variations of both the Shannon–Wiener index and Simpson’s index, are assumed to intelligibly integrate species richness and evenness into all-encompassing measures. However, the efficacy of compound indices is disputed by the possibility of inverse relationships between species richness and evenness. Past studies have assessed relationships between various diversity measures across survey locations for a variety of taxa, often finding species richness and evenness to be inversely related. Butterflies are one of the most intensively monitored taxa worldwide, but have been largely neglected in such studies. Long-term butterfly monitoring programs provide a unique opportunity for analyzing how trends in species diversity relate to habitat and environmental conditions. However, analyzing trends in butterfly diversity first requires an assessment of the applicability of common diversity measures to butterfly assemblages. To accomplish this, we quantified relationships between butterfly diversity measures estimated from 10 years of butterfly population data collected in the North Saskatchewan River Valley in Edmonton, Alberta, Canada. Species richness and evenness were inversely related within the butterfly assemblage. We conclude that species evenness may be used in conjunction with richness to deepen our understandings of assemblage organization, but combining these two components within compound indices does not produce measures that consistently align with our intuitive sense of species diversity.     

Patterns of functional diversity across an extensive environmental gradient: vertebrate consumers, hidden treatments and latitudinal trends

Over the last two decades, although much has been learned regarding the multifaceted nature of biodiversity, relatively little is known regarding spatial variation in constituents other than species richness. This is particularly true along extensive environmental gradients such as latitude. Herein, we describe latitudinal gradients in the functional diversity of New World bat communities. Bat species from each of 32 communities were assigned to one of seven functional groups. Latitudinal gradients existed for the richness, diversity and scaled‐dominance of functional groups. No significant patterns were observed for evenness of functional groups. Measures of functional diversity were different in magnitude and increased towards the equator at a faster rate than expected given the underlying spatial variation in species richness. Thus, latitudinal gradient in species richness alone do not cause the latitudinal gradient in functional diversity. When variation in species composition of the regional fauna of each community was incorporated into analyses, many differences between observed and simulated patterns of functional diversity were not significant. This suggests that those processes that determine the composition of regional faunas strongly influence the latitudinal gradient in functional diversity at the local level. Nonetheless, functional diversity was lower than expected across observed sites. Community‐wide responses to variation in the quantity and quality of resources at the local level probably contribute to differences in functional diversity at local and regional scales and enhance beta diversity.     

Effects of habitat fragmentation on the functional diversity of insects in Thousand Island Lake,China

Due to habitat fragmentation, the loss of species diversity has been extensively studied. On the contrary, the effects of habitat fragmentation on functional diversity is still poorly understood. In the Thousand Island Lake, we conducted studies of insect functional diversity on a set of 29 isolated islands. We used 10 functional diversity indices from three aspects (functional richness, functional evenness and functional divergence) to respectively describe functional diversity of insects on sample islands. We found the following results: (i) The functional indices selected could reflect the functional diversity of sample islands and it is further proved that in general, three components of functional diversity were independent of each other; (ii) Sample islands could be divided into two categories, island JSD and the remaining islands; (iii) Functional richness increased with island area and shape index, but had no significant correlation with isolation. Likewise, both functional evenness and functional divergence had no significant correlation with island attributes. The conclusion to emphasize from our research is that: (i) habitat fragmentation reduced the biological functional diversity to some extent, further demonstrating the importance of habitat continuity in biodiversity protection; and (ii) for functional diversity protection of insects in a fragmented landscape, an island which has high approximate shape index values of at least hundred hectare magnitude order has a critical promoting effect.     

Tracing the patterns of non-marine turtle richness from the Triassic to the Palaeogene: from origin to global spread

Turtles are key components of modern vertebrate faunas and their diversity and distributions are likely to be affected by anthropogenic climate change. However, there is limited baseline data on turtle taxonomic richness through time or assessment of their past responses to global environmental change. We used the extensive Triassic–Palaeogene (252–223 Ma) fossil record of terrestrial and freshwater turtles to investigate diversity patterns, finding substantial variation in richness through time and between continents. Globally, turtle richness was low from their Triassic origin until the Late Jurassic. There is strong evidence for high richness in the earliest Cretaceous of Europe, becoming especially high following the Cretaceous Thermal Maximum and declining in all continents by the end-Cretaceous. At the K–Pg boundary, South American richness levels changed little while North American richness increased, becoming very high during the earliest Palaeogene (Danian). Informative data are lacking elsewhere for this time period. However, the Selandian–Thanetian interval, approximately 5 myr after the K–Pg mass extinction, shows low turtle richness in Asia, Europe and South America, suggesting that the occurrence of exceptional turtle richness in the post-extinction Paleocene fauna of North America is not globally representative. Richness decreased over the Eocene–Oligocene boundary in North America but increased to its greatest known level for Europe, implying very different responses to dramatic climatic shifts. Time series regressions suggest number of formations sampled and palaeotemperature are the primary influencers of face-value richness counts, but additional factors not tested here may also be involved.     

Eocene plant diversity at Laguna del Hunco and Río Pichileufú, Patagonia, Argentina

The origins of South America's exceptional plant diversity are poorly known from the fossil record. We report on unbiased quantitative collections of fossil floras from Laguna del Hunco (LH) and Río Pichileufú (RP) in Patagonia, Argentina. These sites represent a frost-free humid biome in South American middle latitudes of the globally warm Eocene. At LH, from 4,303 identified specimens, we recognize 186 species of plant organs and 152 species of leaves. Adjusted for sample size, the LH flora is more diverse than comparable Eocene floras known from other continents. The RP flora shares several taxa with LH and appears to be as rich, although sampling is preliminary. The two floras were previously considered coeval. However, (40)Ar/(39)Ar dating of three ash-fall tuff beds in close stratigraphic association with the RP flora indicates an age of 47.46+/-0.05 Ma, 4.5 million years younger than LH, for which one tuff is reanalyzed here as 51.91+/-0.22 Ma. Thus, diverse floral associations in Patagonia evolved by the Eocene, possibly in response to global warming, and were persistent and areally extensive. This suggests extraordinary richness at low latitudes via the latitudinal diversity gradient, corroborated by published palynological data from the Eocene of Colombia.     

The shapes of phylogenetic trees of clades, faunas, and local assemblages: exploring spatial pattern in differential diversification

Life on Earth is characterized by strong diversity skewness: related lineages typically show pronounced variation in diversification success, and clades contain hyperdiverse and depauperate subclades. Previous studies have documented diversity skewness only for entire (global) clades. We demonstrate methods for measurement and significance testing of diversity skewness of local assemblages and regional biotas; we illustrate this with an analysis of geographic structure in diversity skewness of primate assemblages. For primates, continental faunas differ in diversity skewness from expectations based on the global phylogeny: South American faunas have significantly low skewness and African faunas have significantly high skewness. However, no local assemblage has diversity skewness different from that expected based on sampling the continental fauna. We also document a latitudinal gradient in diversity skewness for the African assemblages and test for (but do not find) associations of skewness with longitude, local species richness, and net primary productivity. Our data suggest that continental-scale biogeographic events rather than local-scale processes have shaped diversity skewness in modern primate faunas.     

A historic biogeography of the aquatic fauna of the Levant

The historic biogeography of the aquatic fauna of the Levant is reconstructed upon evidence of the gastropod groups with a well-established taxonomy and a rich fossil record. Faunal origins include ancient northern elements coming from an Anatolian–Iberian faunal province that, in the early Miocene, bypassed mainland Italy. This scenario is more plausible than the current 'Lago Mare' biogeographical theory. Palaeotropical elements represent either an Oriental or an African source; in either case these elements could have first reached Anatolia, from where they eventually spread southwards into the Levant, perhaps broadly coinciding in time with the invasion of the northern elements. Within the Levant, the faunas of the Euphrates, Orontes, and Jordan formed at first one common pool, but by 2 Mya the fauna of the Jordan had diverged from that of the Orontes; later, the Orontes fauna diverged from that of the Euphrates. By 1.4 Mya the fauna of the Levant consisted of both ancient survivors and new species. Some 780 000 years ago there was an exceptionally diversified fauna with many new, northern elements. Many of these elements did not survive to recent times. The fossil record suggests that the fauna of the Jordan Valley was separate from that of the Orontes throughout the Pliocene–Pleistocene. Taxa common today to the Jordan Valley and coastal sites may reflect an ancient system of rivers that drained westwards to the Mediterranean Sea, across the Jordan Valley of today.  © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 92 , 625–639.     

Ecological and biogeographical characteristics of butterflies (Lepidoptera,Rhopalocera) of Vietnam

The lowland butterfly fauna in Vietnam is more diversified whereas the mountain fauna is more specific and contains more endemic taxa. The lowland areas have significantly higher levels of species richness (51–86%) as compared to the mountainous areas (25–66%). The aspect of the fauna shows a well-developed seasonality, with higher species diversity during the dry period and in the transitional period between the dry and rainy seasons. The butterfly fauna of Vietnam should be regarded not as a transitional one between the faunas of the Holarctic and Indo-Malayan Regions, but as one of the principal faunas of the Indo-Malayan Region, constituting the core of the Indo-Burmese fauna and including representatives of the neighboring faunistic centers.     

The arboreal ants of a Neotropical rain forest show high species density and comprise one third of the ant fauna

In tropical rain forests, the ant community can be divided into ground and arboreal faunas. Here, we report a thorough sampling of the arboreal ant fauna of La Selva Biological Station, a Neotropical rain forest site. Forty-five canopy fogging samples were centered around large trees. Individual samples harbored an average of 35 ant species, with up to 55 species in a single sample. The fogging samples yielded 163 observed species total, out of a statistically estimated 199 species. We found no relationship between within-sample ant richness and focal tree species, nor were the ant faunas of nearby trees more similar to each other than the faunas of widely spaced trees. Species density was high, and beta diversity was low: A single column of vegetation typically harbors at least a fifth of the entire arboreal ant fauna. Considering the entire fauna, based on 23,326 species occurrence records using a wide variety of collecting methods, 182 of 539 observed species (196 of 605, estimated statistically) were entirely arboreal. The arboreal ant fauna is thus about a third of the total La Selva ant fauna, a robust result because inventory completeness was similar for ground and arboreal ants. The taxonomic history of discovery of the species that make up the La Selva fauna reveals no disproportionately large pool of undiscovered ant species in the canopy. The "last biotic frontier" for tropical ants has been the rotten wood, leaf litter, and soil of the forest floor.     

Regional and global elevational patterns of microbial species richness and evenness

Although elevational gradients in microbial biodiversity have attracted increasing attention recently, the generality in the patterns and underlying mechanisms are still poorly resolved. Further, previous studies focused mostly on species richness, while left understudied evenness, another important aspect of biodiversity. Here, we studied the elevational patterns in species richness and evenness of stream biofilm bacteria and diatoms in six mountains in Asia and Europe. We also reviewed published results for elevational richness patterns for soil and stream microbes in a literature analysis. Our results revealed that even within the same ecosystem type (that is, stream) or geographical region, bacteria and diatoms showed contrasting patterns in diversity. Stream microbes, including present stream data, tend to show significantly increasing or decreasing elevational patterns in richness, contrasting the findings for soil microbes that typically showed nonsignificant or significantly decreasing patterns. In all six mountains for bacteria and in four mountains for diatoms, species richness and evenness were positively correlated. The variation in bacteria and diatom richness and evenness were substantially explained by anthropogenic driven factors, such as total phosphorus (TP). However, diatom richness and evenness were also related to different main drivers as richness was mostly related to pH, while evenness was most explained by TP. Our results highlight the lack of consistent elevational biodiversity patterns of microbes and further indicate that the two facets of biodiversity may respond differently to environmental gradients.