Vertebrate taphonomy in loess-palaeosol deposits: A case study from the late Miocene of central Argentina

This paper deals with the taphonomic analysis of the late Miocene bone assemblage from the Cerro Azul Formation at Telén (La Pampa Province, Argentina). The faunal assemblage was assigned to the Huayquerian mammal age (late Miocene). The fossiliferous section shows a homogeneous lithology, and is interpreted as a loess deposit with two similar and slightly developed palaeosols, classified as calcic vertisols. The studied sample comprises 5598 remains anatomically and taxonomically determined. They were collected from an area of about 48,000 m², appearing randomly distributed through the section and with low density. Most remains are small- to very small-sized, disarticulated, and very fragmented. Different taphonomical histories are inferred for microvertebrates and macromammals. The microvertebrate assemblage is interpreted as the result of predator activities. After a brief period of pre-burial exposure, remains were dispersed from the original depositional area. On the other hand, a natural and gradual death process is envisaged for macromammals, followed by a long period of exposure to weathering and dispersal by physical agents. Remains of both groups, once buried, suffered the diagenetic processes of the host rock. Consequently, the fossil assemblage from Telén would represent a condensed assemblage corresponding to two distinct time spans, i.e., the accumulation of microvertebrates took place in a short time interval whereas that of macromammals occurred over a longer period, coincident with the development of both soils.     

Miocene snakes from northeastern Kazakhstan: new data on the evolution of snake assemblages in Siberia

Abstract

The Neogene snake fauna from the central and eastern regions of Eurasia is still largely unknown. This paper reports on a unique snake fauna from the late middle Miocene of the Baikadam and Malyi Kalkaman 1 and 2 localities, northeastern Kazakhstan, which represents the best-documented Miocene snake assemblage in Central Asia. Previous studies admitted that snake fauna could be homogeneous over a large part of Eurasia during the Miocene, with the late middle to early late Miocene assemblages similar to snake assemblages that inhabited Europe in the late early and early middle Miocene. This assumption is partially supported by the presence of Texasophis bohemiacus and Coluber cf. hungaricus, as well as vipers of the ‘V. aspis’ complex. However, the presence of taxa which are (1) probably not related to European representatives (‘Colubrinae’ A and B), (2) probably never occurred in Central and Western Europe and (3) are closely related to species recently inhabiting southern Siberia (Elaphe aff. dione, Gloydius sp.) indicates that faunal dissimilarity was relatively high within Eurasia during the late middle Miocene. This assumption is in accordance with studies of small mammal assemblages which show a decreasing homogenity in the Eurasia in the course of the middle Miocene.     

The westernmost tarsier: A new genus and species from the Miocene of Pakistan

As the closest living sister group of anthropoids, tarsiers (Family Tarsiidae) are an important group in primate evolution. However, their fossil record is poor: only four species have been described, two from the Eocene of China and two from the Miocene of Thailand. All are from outside the range of the living species, which occur only on islands off Southeast Asia. Here, we describe a new fossil tarsier from Pakistan, a significant range extension. This record consists of two lower molars, an upper molar, and a lower premolar found in the Miocene Manchar Formation (∼18–16 Ma [millions of years ago]) of Sindh Province, southern Pakistan. The Pakistani tarsier is morphologically distinct from all living and fossil tarsiers, but most similar to the middle Miocene Thai species Tarsius thailandicus. Though living tarsiers have traditionally been classified in a single genus, a recent revision proposed a division into three genera, which is strongly supported by molecular data. The Pakistani species is not referable to any of these genera, and we create for it and T. thailandicus a new tarsiid genus. This discovery broadens our understanding of the geographic range and morphological diversity of Miocene tarsiers and helps to put the living tarsiers into their evolutionary context.     

Bioerosion versus colonisation on Bivalvia: A case study from the Upper Miocene of Cacela (southeast Portugal)

A study of the bioerosion structures and the skeletobionts associated with the most common bivalves (infauna and epifauna) from the classic Upper Tortonian site of Cacela, Algarve region, SE Portugal, revealed 24 different ichnotaxa and five systematic groups of encrusters (Foraminifera, Annelida, Bryozoa, Balanomorpha and Bivalvia).Despite a relatively high ichnodiversity, the percentage of bioerosion in the specimens analysed is quite low (10-12%). This is explained by rapid sedimentation with only short periods of exposure on the sea-floor.The dominant bioerosion structures were linked to the boring activity of nonpredatory organisms. Algal microborings are the most common, followed by annelid borings (Caulostrepsis-Maeandropolydora), sponge borings (Entobia) and ctenostome bryozoans (Pinaceocladichnus).Spatial distribution of bioerosion structures and encrusters allow the reconstruction of three successive stages. The first was restricted to the biosubstrate lifetime, with structures showing a preferred orientation and situated exclusively on the outside of the shells. The second comprises the period immediately after death, with structures that extend outwards and start with the colonization of the interior of the valves, losing their initial orientation. The third stage relates to later postmortem colonisation, with structures on both sides of the valves and without a preferential orientation.     

功能、谱系多样性在机场鸟类群落研究中的应用——以扬州泰州国际机场为例

随着航空业的发展,野生动物与飞机之间的冲突愈发密集,机场鸟类群落多样性研究引起了大量关注。研究鸟类群落对生境类型的使用状况,可以掌握生境类型与鸟击风险的潜在关系,为机场环境改造提供理论依据。本研究于2019年7月至2021年11月,采用样点法对扬州泰州机场及周边8 km范围内的农田、湿地、林地和城镇4种生境中30个样点的鸟类群落进行调查。利用鸟类群落多样性指数,包括丰富度、多度、香农威纳多样性指数、辛普森多样性指数以及均匀度指数来表征群落的物种多样性,以及功能和谱系多样性,阐明机场周边4种生境的鸟类群落多样性差异。同时,基于多度加权的平均成对功能距离（MFD）和平均成对谱系距离（MPD）来表征群落的功能和谱系结构,探究群落构建机制,量化各多样性指标间的相关性。研究共记录扬州泰州国际机场鸟类88种,分别隶属于14目36科,目、科中数量最多的为雀形目（Passeriformes）和鹬科（Scolopacidae）。谱系和功能多样性在生境间差异显著,功能分散度在农田最高,城镇最低;谱系多样性指数在城镇最高,湿地最低。标准化效应值分析表明,随机生态过程影响了湿地鸟类群落功能和谱系的构建过程,农...     

The relevance,biases, and importance of digitising opportunistic non-standardised collections: A case study in Iberian harvestmen fauna with BOS Arthropod Collection datasets (Arachnida,Opiliones)

In this study, we analyse the relevance of harvestmen distribution data derived from opportunistic, unplanned, and non-standardised collection events in an area in the north of the Iberian Peninsula. Using specimens deposited in the BOS Arthropod Collection at the University of Oviedo, we compared these data with data from planned, standardised, and periodic collections with pitfall traps in several locations in the same area. The Arthropod Collection, begun in 1977, includes specimens derived from both sampling types, and its recent digitisation allows for this type of comparative analysis. Therefore, this is the first data-paper employing a hybrid approach, wherein subset metadata are described alongside a comparative analysis. The full dataset can be accessed through Spanish GBIF IPT at http://www.gbif.es:8080/ipt/archive.do?r=Bos-Opi, and the metadata of the unplanned collection events at http://www.gbif.es:8080/ipt/resource.do?r=bos-opi_unplanned_collection_events. We have mapped the data on the 18 harvestmen species included in the unplanned collections and provided records for some species in six provinces for the first time. We have also provided the locations of Phalangium opilio in eight provinces without published records. These results highlight the importance of digitising data from unplanned biodiversity collections, as well as those derived from planned collections, especially in scarcely studied groups and areas.     

Aspects of the functional morphology in the cranial and cervical skeleton of the sabre-toothed cat Paramachairodus ogygia (Kaup, 1832) (Felidae, Machairodontinae) from the Late Miocene of Spain: implications for the origins of the machairodont killing bite

The skull and cervical anatomy of the sabre-toothed felid Paramachairodus ogygia (Kaup, 1832) is described in this paper, with special attention paid to its functional morphology. Because of the scarcity of fossil remains, the anatomy of this felid has been very poorly known. However, the recently discovered Miocene carnivore trap of Batallones-1, near Madrid, Spain, has yielded almost complete skeletons of this animal, which is now one of the best known machairodontines. Consequently, the machairodont adaptations of this primitive sabre-toothed felid can be assessed for the first time. Some characters, such as the morphology of the mastoid area, reveal an intermediate state between that of felines and machairodontines, while others, such as the flattened upper canines and verticalized mandibular symphysis, show clear machairodont affinities.  © 2005 The Linnean Society of London, Zoological Journal of the Linnean Society , 2005, 144 , 363−377.     

Hipparion material from Gaojiashan locality in the Late Miocene of Linxia Basin,Gansu, China and associated mammalian fossil assemblage

Two Hipparion species, H. forstenae and H. hippidiodus from Gaojiashan locality in the Linxia Basin, Gansu, China are described in this paper, with the first presence of the former in the Linxia Basin. The lower cheek teeth of Hipparion from Gaojiashan bear deep ectoflexids, and after comparisons to other Chinese Hipparion fossils with deep ectoflexids, the mandibles with deep ectoflexids on the lower premolars suggest their attributions to H. forstenae. The presence of a deep ectoflexid on p2 may be interpretable as an intraspecifically variable feature in H. forstenae, and can also be found in H. dermatorhinum. Besides the Hipparion material, at least 8 species of large mammals occur at the Gaojiashan locality, including Adcrocuta eximia, Chilotherium wimani, Shansirhinus ringstroemi, Eucladoceros cf. proboulei, Palaeotragus cf. coelophrys, Giraffidae gen. et sp. indet., and the previously studied Promephitis hootoni and Eostyloceros hezhengensis. Although the sample from Gaojiashan shares five species with the Yangjiashan fauna, the Gaojiashan fossil assemblage may date to the Baodean because of the presence of H. forstenae. The overall taxonomic composition of the Gaojiashan assemblage at least suggests an approximate Baodean age, which would imply survival of C. wimani into the Baodean of the Linxia Basin.     

No correlation between the diversity and productivity of assemblages: evidence from the phytophage and predator assemblages in various cotton agroecosystems

Biodiversity research has shown that primary productivity increases with plant species number, especially in many experimental grassland systems. Here, we assessed the correlation between productivity and diversity of phytophages and natural enemy assemblages associated with planting date and intercropping in four cotton agroecosystems. Twenty-one pairs of data were used to determine Pearson correlations between species richness, total number of individuals, diversity indices and productivity for each assemblage every five days from 5 June to 15 September 2012. At the same trophic level, the productivity exhibited a significant positive correlation with species richness of the phytophage or predator assemblage. A significant correlation was found between productivity and total number of individuals in most cotton fields. However, no significant correlations were observed between productivity and diversity indices (including indices of energy flow diversity and numerical diversity) in most cotton fields for either the phytophage or the predator assemblages. Species richness of phytophage assemblage and total individual numbers were significantly correlated with primary productivity. Also, species richness of natural enemy assemblage and total number of individuals correlated with phytophage assemblage productivity. A negative but not significant correlation occurred between the indices of numerical diversity and energy flow diversity and lower trophic-level productivity in the cotton-phytophage and phytophage-predator assemblages for most intercropped cotton agroecosystems. Our results clearly showed that there were no correlations between diversity indices and productivity within the same or lower trophic levels within the phytophage and predator assemblages in cotton agroecosystems, and inter-cropped cotton fields had a stronger ability to support the natural enemy assemblage and potentially to reduce phytophages.     

Dung beetle assemblages organization in two contrasted areas of the Mediterranean region: affinities and divergences

Quantification of the species richness and diversity is important when comparing sites; these variables are influenced by local and regional factors. The structure of assemblages of dung beetles as well as their species composition and diversity were compared between two sites on both sides of the Mediterranean Sea (France FR and Tunisia TN). From a total of 132 traps, 15,778 specimens were collected belonging to 86 species (46 in FR vs. 40 in TN). Species composition varied highly between FR and TN (only 10 species in common). The temporal occurrence of Aphodiidae and Scarabaeidae showed different patterns due to several factors: phenology of species, geographical distribution and local ecological requirements. When quantifying the beta diversity, the turnover of species was for almost cases higher within the same season than between seasons. Moreover, seasonal turnover was different at both sites. Evenness and rank-abundance analyses demonstrated that autumn-winter was the most constraining season in FR, with one dominant species (Agrilinus constans) in winter assemblages (96.8% of individuals). Conversely summer was the most constraining season in TN, with Onthophagus taurus as dominant species in assemblages (87.7%). The influence of local and historical factors is discussed.     

A new leptarctine (Carnivora: Mustelidae) from the early Miocene of the northern Tibetan Plateau: implications for the phylogeny and zoogeography of basal mustelids

A recently discovered basal mustelid carnivoran, Kinometaxia guangpui gen. et sp. nov. , is described from the lower Miocene Tiejianggou Formation in the Danghe (Tabenbuluk) area of the northern Tibetan Plateau, north-western Gansu Province, China. The new Chinese form has a double temporal crest and roughened surface on the temporal area, a small orbit, a deep zygomatic arch, an anterolaterally expanded ectotympanic that fuses with the postglenoid process, and a lateral opening of the postglenoid foramen. These cranial morphologies suggest membership in the leptarctines, a group of markedly hypocarnivorous taxa mostly confined to the Miocene of North America. The rather hypercarnivorous dentition of the new Chinese form, however, is in sharp contrast to that of the traditionally defined leptarctines that have complex and quadrate M1s and P4s. Phylogenetic analysis suggests a sister relationship of the new Chinese mustelid and Schultzogale , and together they form a basal sister clade to the advanced leptarctines such as Craterogale , Leptarctus , and Hypsoparia . The Chinese form further expands the concept of the leptarctine clade and adds additional complexity to the early evolution of the Mustelidae. It bridges a morphological gap between European and North American taxa, and supplies an important piece to the puzzle of the zoogeography of basal mustelids. Furthermore, the new leptarctine helps to constrain the age of the Danghe strata, which has important implications for the timing of tectonic activity in the northern Tibetan Plateau.  © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society , 2004, 142 , 405−421.     

Diversity, abundance or rare species as a target for the conservation of mammalian carnivores: a case study in Southern Spain

Management goals in protected areas and/or communities usually include diversity as one of the most valuable and confident criteria. Nevertheless, the use of diversity and related indices as a means of evaluating successful management practices could produce conflicting results. Here we report a case study in one of the most important European protected areas. After 6 years of intensive conservation management of the Don~ana National Park, the general abundance and numbers of the target single-species conservation plan (the Iberian lynx) increased, although carnivore community diversity and evenness decreased. This was a result of a disproportionate increase of an oportunistic native species, the red fox. We propose the combined use of diversity, richness and evenness indices when monitoring management practices such as those reported here.     

缙云山森林林隙与非林隙物种多样性比较研究

运用Gleason物种丰富度指数、Shannon-Wiener指数、Pielou均匀度指数、Simpson指数、生态优势度指数、均优多指数和群落优势度指数对缙云山森林群落林隙与非缃隙物种多样性进行了研究,对群落稳定性进行了探讨。结果表明,林隙以个体数为基础的物种丰富度为12.14,Shannon-Wiener指数为4.62,均匀度为0.70,Simpson指数为13.32,灌木层所起作用较大;非林隙林分各项物种多样性指数明显低于林隙,依次为6.32、3.74、0.66、8.16。林隙植物群落物种多样性指数显著高于非林隙,而生态优势度和群落优势度又明显低于非林隙,表明作为自然干扰和人为干扰的产物,林隙的存在增加了群落物种多样性,但同时也降低了群落的稳定性。     

系统发育多样性与系统发育结构在岛屿植物群落保护中的意义——以蜈支洲岛为例

为探讨系统发育多样性和系统发育结构在岛屿植物群落保护决策制定中的作用,以海南三亚蜈支洲岛被子植物群系为例,分析物种丰富度和系统发育多样性的相关性。结果表明,蜈支洲岛植被可分为10种群系类型,22个样方的物种丰富度与系统发育多样性呈显著正相关,但系统发育多样性与物种丰富度对植物多样性保护优先顺序的指示有差异。森林群系的物种丰富度和系统发育多样性普遍高于灌木和草本群系,4个森林群系样方表现为系统发育结构发散,3个森林群系样方表现为系统发育结构聚集。灌木群系中露兜树(Pandanus tectorius)灌丛和草海桐(Scaevola sericea)灌丛系统发育多样性较高,草本群系中厚藤(Vitex trifolia)灌草丛系统发育多样性较高,灌木和草本群系大多倾向于系统发育结构聚集。距海或人类活动区较近的群系可能受环境过滤的作用,而远离海和人类活动区的群系主要受竞争排斥作用影响。因此,在岛屿植物多样性保护策略制定中应当综合考虑物种和系统发育维度,以及环境、演替阶段及用岛方式等因素的影响。     

Speciation and radiations track climate transitions since the Miocene Climatic Optimum: a case study of southern African chameleons

Aim The high amount of species diversity concentrated in southern Africa has been attributed to palaeoclimatic factors, and the timing of radiations in some taxa corresponds to global palaeoclimatic trends. Using dwarf chameleons (Bradypodion: Chamaeleonidae) as a model system, we explored the relationship between palaeoclimatic fluctuations and cladogenesis with respect to both temporal and spatial patterns in an effort to understand the process of speciation in southern Africa. Location South Africa, with particular emphasis on the Cape Floristic Region and the Maputaland–Pondoland–Albany hotspot. Methods Mitochondrial sequence data (ND2 and 16S) were used to estimate the timing of major radiations and to examine the number of lineages through time. A dated phylogeny was constructed using Bayesian phylogenetic reconstruction, and a Bayesian relaxed molecular clock was used to estimate divergence times. Spatial data and lineage‐through‐time plots were used to identify geographic regions that underwent diversification in connection with major climatic events. Both parsimony and likelihood optimizations of habitat type on the phylogeny were used to determine whether major habitat shifts have occurred. On a coarse scale (half‐degree grid cells), phylogenetic diversity (sum of the branch lengths linking terminals) was compared with species richness (absolute number of species) to identify areas of conservation importance. Results The complete species phylogeny of dwarf chameleons shows that the timing and mode of diversification exhibit spatio‐temporal patterns that link to phases in the evolution of southern Africa’s climate over the last 14 Myr. Optimizations of habitat on the phylogenetic tree show a progression from closed to open habitats since the Mid‐Miocene, corresponding to the shift from C₃ to C₄ environments, and later with the development of south‐western Africa’s winter‐rainfall regime. These shifts are not simultaneous across the region, with different geographic centres of diversity generated during different time periods. Main conclusions Regions that are prominent centres of chameleon diversification are encompassed by the current biodiversity hotspots as shown by chameleon species richness and phylogenetic diversity. Diversity within the Cape Floristic Region appears to be the result of a Late Pliocene radiation, whereas the diversity encompassed within the Maputaland–Pondoland–Albany hotspot is an aggregate of asynchronous radiation events, probably influenced by lineage losses. Overall, dwarf chameleons have experienced a shift in habitat types, with recent radiations occupying open habitats, and older lineages persisting in relictual forested habitats, corresponding to the continental shift of vegetation types since the Miocene Climatic Optimum.     

A comparative study of the glomerular peripolar cell and the renin-secreting cell in twelve mammalian species

The peripolar cell is a glomerular epithelial cell situated within Bowman's capsule at its vascular pole. It is believed to be a secretory cell which forms part of the juxtaglomerular apparatus. Scanning electron microscopy was used to perform a comparative study of the morphology and number of peripolar cells in twelve mammalian species. The number of renin-secreting cells in kidney sections stained by renin antibodies and immunocytochemistry was counted. There was a marked inter-species variation in the number, size and appearance of peripolar cells. They were largest and most abundant in sheep and goat and fewest in dog, cow and human. There was no correlation between the numbers of peripolar cells and renin-secreting cells. This does not support the view that the peripolar cell is part of the juxtaglomerular apparatus.     

Knee function through finite element analysis and the role of Miocene hominoids in our understanding of the origin of antipronograde behaviours: the Pierolapithecus catalaunicus patella as a case study

Although extensive research has been carried out in recent years on the origin and evolution of human bipedalism, a full understanding of this question is far from settled. Miocene hominoids are key to a better understanding of the locomotor types observed in living apes and humans. Pierolapithecus catalaunicus, an extinct stem great ape from the middle Miocene (c. 12.0 Ma) of the Vallès-Penedès Basin (north-eastern Iberian Peninsula), is the first undoubted hominoid with an orthograde (erect) body plan. Its locomotor repertoire included above-branch quadrupedalism and other antipronograde behaviours. Elucidating the adaptive features present in the Pierolapithecus skeleton and its associated biomechanics helps us to better understand the origin of hominoid orthogrady. This work represents a new biomechanical perspective on Pierolapithecus locomotion, by studying its patella and comparing it with those drawn from a large sample of extant anthropoids. This is the first time that the biomechanical patellar performance in living non-human anthropoids and a stem hominid has been studied using finite element analysis (FEA). Differences in stress distribution are found depending on body plan and the presence/absence of a distal apex, probably due to dissimilar biomechanical performances. Pierolapithecus’ biomechanical response mainly resembles that of great apes, suggesting a similar knee joint use in mechanical terms. These results underpin previous studies on Pierolapithecus, favouring the idea that a relevant degree of some antipronograde behaviour may have made up part of its locomotor repertoire. Moreover, our results corroborate the presence of modern great ape-like knee biomechanical performances back in the Miocene.     

Three New Ichnogenera of Biting and Gnawing Traces on Reptilian and Mammalian Bones: A Case Study from the Miocene of the Czech Republic

The Ahníkov (Miocene, Czech Republic) site represents a concentration of vertebrate skeletal remains in a swamp setting. Autochthonous bone deposits were strongly altered by sedimentary processes and early diagenesis. Biting and gnawing traces recognized on hard animal tissues (bones, teeth, antlers, turtle thoraces) represent seven recurring morphotypes. The following ichnotaxa are erected: Nihilichnus nihilicus n. igen. et n. isp., Nihilichnus mortalis n. isp., Machichnus regularis n. igen. et n. isp., Machichnus multilineatus n. isp., Machichnus bohemicus n. isp., and Brutalichnus brutalis n. igen. et n. isp. Each kind of bones or similar substrates bears a specific proportion of various bite traces but no observed morphotype is specific for a single substrate. Ethologically, traces of sharpening of teeth are principally different from predation traces. The beavers Steneofiber eseri and Steneofiber depereti, the carnivore Amphicyon sp. and the crocodiles are presumed as the tracemakers.     

ECo: A new measure evaluating the degree of consistency between environmental factors and spatial arrangement of species assemblages

We introduce a measure of Environmental Consistency (ECo), which assesses the probability of reducing homogeneity in the environmental factors within a species’ distribution by randomly displacing its occurrences. ECo is computed by applying null model analysis to a species incidence matrix where each locality is associated with a set of environmental values. Environmental homogeneity is measured, for each species, as the average multiparametric distance between any pair of localities where the species occurs. ECo can account for the effect of species interactions and resource availability by using different null models that permit or forbid occurrence displacements altering species local abundance or species prevalence. ECo provides researchers with a flexible statistical framework to address a wide range of ecological and biogeographical issues. We investigated in depth the properties and the potentialities of ECo, showing how it integrates the concepts of Eltonian and Grinnelian niches. We demonstrate that a close relationship exists between niche breadth at species level and environmental consistency of species assemblages. In addition, we provide evidence that ecological consistency is closely related to species range. A software to compute ECo is freely available at http://forest.jrc.ec.europa.eu/download/software/eco.