Isolation of a novel pentachlorophenol-degrading bacterium, Pseudomonas sp. Bu34

A pentachlorophenol (PCP)-degrading bacterium was isolated from possible PCP-contaminated soil from Pusan, Korea and identified as a member of the genus Pseudomonas. It used PCP as its sole source of carbon and energy. This micro-organism was capable of degrading PCP more effectively, certified by the increase in cell density and the decrease in PCP substrate. Pseudomonas sp. Bu34 was able to degrade a much higher concentration of PCP (4000 mg l⁻¹) than any previously reported PCP-degrading bacteria and fungi and to grow in mineral salts solution containing one of a variety of chlorophenols. In non-acclimated strain Bu34, the cell number decreased from 87 to 99·9% in 75–4000 mg l⁻¹ PCP at 24 h. In the acclimated strain the PCP toxic effect did not appear with 75 mg l⁻¹ PCP treatment, but 1000–4000 mg l⁻¹ PCP decreased the cell number of strain Bu34 by 25% to 24 h and then the cell number slightly increased at 48 h. Therefore, it suggested that the maximum resistance of acclimated strain Bu34 to PCP was 4000 mg l⁻¹ PCP. We suggest that strain Bu34 could be used as a micro-organism for the bioremediation of highly PCP-contaminated soils, water or wood products.     

Effect of acute and chronic ammonia and nitrite exposure on oxygen consumption and growth of juvenile big bellied seahorse

Juvenile big bellied seahorse Hippocampus abdominalis were exposed acutely and chronically to elevated ammonia and nitrite {24 h exposure: 0·01, 5·0, 10·1, 14·8 and 19·9 mg l⁻¹ total ammonia-nitrogen [TA-N] and <0·001, 74·4, 99·2 and 123·6 mg l⁻¹ [NO₂-N] nitrite-nitrogen and 35 days exposure: 0·11, 0·55, 1·67 and 3·07 mg l⁻¹ TAN and <0·001, 0·92, 4·67 and 9·10 mg NO₂-N l⁻¹}. Significant ( P <0·001) increases in oxygen consumption rate and ventilation frequency occurred at 14·8, 19·9 mg l⁻¹ TA-N and 99·2, 123·6 mg l⁻¹ NO₂-N for acutely exposed fish. Oxygen consumption rate was significantly ( P <0·05) elevated at 1·67 and 3·07 mg l⁻¹ TA-N in chronically treated fish and ventilation frequency increased significantly ( P <0·05) at 0·55, 1·67, 3·07 mg l⁻¹ TA-N and 4·59, 9·10 mg l⁻¹ NO₂-N. There were no significant differences in growth between controls and ammonia exposed fish. Mortalities occurred at 14·8, 19·9 mg l⁻¹ TA-N.     

Chronic toxicity of ammonia to juvenile gilthead seabream Sparus aurata and related histopathological effects

Effect of 20 days exposure of juvenile gilthead seabream ( Sparus aurata ) to elevated levels of ammonia on growth and survival was examined in a continuous flow system. Suppressed growth and reduced survival were observed at concentrations of 8.2 and 13 mg l⁻¹ total ammonia-N (0.5 and 0.7 mg l⁻¹ un-ionized ammonia-N, respectively) and higher. The maximum acceptable toxic concentration (MATC) for growth was between 4.8 to 8.2 mg l⁻¹ total ammonia-N (0.3 and 0.5 mg l⁻¹ un-ionized ammonia-N, respectively). Fish exposed to high ammonia levels (13 mg l⁻¹ total ammonia-N, 0.7 mg l⁻¹ un-ionized ammonia-N) displayed clear signs of liver pathology. Existing evidence suggests that S. aurata is less sensitive to ammonia than other reported marine and freshwater fish.
Under certain conditions ammonia concentration in the intensive fish ponds in Eilat may exceed the no observed effect concentration for S. aurata .     

Effect of chlorination on β-D-galactosidase activity of sewage bacteria and Escherichia coli

The effect of chlorine on β- D- galactosidase activity of sewage bacteria and Escherichia coli was studied. β- D- galactosidase activity of sewage was more resistant to chlorine than faecal coliform cultivability. At low initial dosage (0·05 mg Cl₂ l⁻¹) neither cultivability (colony-forming units (cfu)), nor enzyme activity of E. coli suspensions were severely impaired. When initial chlorine concentration was increased to 0·1 mg Cl₂ l⁻¹, the cfu number decreased whereas enzyme activity remained high, i.e. the enzyme activity calculated cfu⁻¹ increased. At higher chlorine doses both cfu and enzyme activity were reduced, but non-cultivable cells retained assayable activity after chlorination. Mean values of the enzyme activity calculated cfu⁻¹ decreased when the chlorine dosage was increased from 0·1 to 0·5 mg Cl₂ l⁻¹, but were not significantly different ( P > 0·05) for dosages of 0·2–0·7 mg Cl₂ l⁻¹. After chlorination, β- D- galactosidase activity of E. coli was less reduced than cfu and direct viable count numbers, but more reduced than 5-cyano-2-3, ditolyl tetrazolium chloride and total cell counts, and the enzyme activity represented an alternative activity parameter of chlorinated samples.     

Galacto-oligosaccharide production using a recycling cell culture of Sterigmatomyces elviae CBS8119

Addition of small amounts of Fe²⁺, Zn²⁺, Cu²⁺ and thiamine-HCl to the culture medium was required for promoting the galacto-oligosaccharide (Gal-OS)-producing activity of Sterigmatomyces elviae CBS8119, when the concentration of yeast extract in the medium was lowered to 0·1 g l⁻¹. Galacto-oligosaccharide production using a recycling cell culture was performed in a medium containing 360 mg ml⁻¹ of lactose supplemented with optimal concentrations of Fe²⁺ (1·5 mg l⁻¹ of FeSO₄.7H₂O), Zn²⁺ (15 mg l⁻¹ of ZnSO₄.7H₂O), Cu²⁺ (0·5 mg l⁻¹ of CuSO₄.5H₂O) and thiamine-HCl (1 mg l⁻¹ ) . Galacto-oligosaccharide production was maintained at high levels during six cycles of production, with the amount of Gal-OS produced in each cycle being more than 216 mg ml⁻¹ (weight yield of more than 60%).     

Blood osmolality shift in juvenile red drum, Sciaenops ocellatus L. exposed to fresh water

Juvenile red drum, Sciaenops ocellatus , measuring 40–49 mm s.l. tolerated abrupt transfer from 28%osalinity sea water to fresh water (< l%o). A significant shift in blood osmolality from a level of about 350 mosmol l⁻¹ in sea water to a new level of about 311 mosmol l⁻¹ was experienced by fish after 48 h in fresh water. The shift was followed by a slight reduction in blood osmolality to a sustained level of 300 mosmol l⁻¹ after 96 h exposure to fresh water. The overall effect of increased environmental calcium on blood osmotic pressure of young red drum was not significant at the level tested.     

The dissolved oxygen and temperature requirements of Atlantic salmon, Salmo salar L., in the Thames Estuary

An improvement in water quality in the estuary of the River Thames in recent years, coupled with the return of adult Atlantic salmon following artificial stocking of the headwaters with parr and of the lower river with smolts, has provided an opportunity to define the dissolved oxygen requirements of adult fish ascending the estuary to reach fresh water. Between July and September 1984 the fish traversed a length of 30 km where the concentration of dissolved oxygen was at its lowest, the 5-percentile and median values being 1.6–2.6 and 3.5–5.9 mg l⁻¹, respectively, depending upon exact location. Within this zone there was a length of about 20 km in which the minimum at any one time during the period was always less than 5mg l⁻¹ and a shorter length of 15 km in which it was always less than 4.7 mg l⁻¹, and it is likely that some fish experienced even lower values during their upstream passage. Over lengths of 1, 10 and 30 km, for example, the 10-percentiles were 2, 2.2 and 2.8 mg l⁻¹, respectively, the medians were 3.6, 3.8 and 4.3 mg l⁻¹, respectively and the 90-percentiles were 4.8, 4.9 and 5.3 mg l⁻, respectively. The water temperature during August, when most of the fish were caught, was never lower than 19°C and there was a length of estuary of at least 20 km where it exceeded 22°C.     

Morphological changes in the gills of Lophiosilurus alexandri exposed to un-ionized ammonia

The average lethal concentration of un-ionized ammonia (48-h LC₅₀NH₃) has been determined by the static assay for larvae (0.48 mg l⁻¹) and alevins (0.92 mg l⁻¹) of 'pacamã' Lophiosilurus alexandri. Studies by light and scanning electron microscopes at the greatest concentration of NH₃ (0.99 mg l⁻¹ for larvae and 1.5 mg l⁻¹ for alevins) have shown that the changes in the cells and branchial tissue were more intense in the alevins.     

In vitro regeneration and genetic transformation of the berberine-producing plant,Thalictrum flavum ssp. glaucum

Protocols have been developed for the in vitro regeneration and Agrobacterium -mediated genetic transformation of meadow rue, Thalictrum flavum ssp. glaucum . Ten-day-old seedlings were bisected along the embryonic axis and the cotyledons were co-cultured with various Agrobacterium tumefaciens strains for 3 days. The cotyledons were cultured on a shoot induction medium (B5 salts and vitamins, 30 g l⁻¹ sucrose, 2 mg l⁻¹ kinetin, and 3 g l⁻¹ Gelrite) containing 25 mg l⁻¹ hygromycin B as the selection agent and 250 mg l⁻¹ timentin to facilitate the elimination of Agrobacterium . Only the oncogenic A. tumefaciens strains A281 and C58 produced transgenic T. flavum callus tissues. A281 was the most effective strain producing hygromycin-resistant callus on 85% of the explants. Transgenic callus was subcultured on the shoot induction medium every 2 weeks. After 12 weeks, hygromycin-resistant shoots that formed on explants exposed to strain A281 were transferred to a root induction medium (B5 salts and vitamins, 25 mg l⁻¹ hygromycin B, 250 mg l⁻¹ timentin, and 3 g l⁻¹ Gelrite). Detection of the β -glucuronidase ( GUS ) gene using a polymerase chain reaction assay, the high levels of GUS mRNA and enzyme activity, and the cytohistochemical localization of GUS activity confirmed the genetic transformation of callus cultures and regenerated plants. The transformation process did not alter the normal content of berberine in transgenic roots or cell cultures; thus, the reported protocol is valuable to study the molecular and metabolic regulation of protoberberine alkaloid biosynthesis.     

Assessment of microbial involvement in the elevation of copper levels in drinking water

A study of bacterial populations in metropolitan Adelaide domestic reticulation pipes was conducted to investigate a possible link between copper in drinking water and biofilms. Biofilm densities from cold water copper pipes at 10 sample sites were measured by viable cell counts. The range detected was from <2 × 10¹ to 3·25 × 10⁷ cfu cm⁻². Five isolates were selected for further experiments as they represented a range of responses to solvated copper and relative tendency for adhesion on glass slides. Drinking water supplied to the Adelaide Hills is high in total organic carbon (TOC; 22·57 mg C l⁻¹) and has a negative Langelier Index (LI; −1·16), whereas Adelaide metropolitan water undergoes filtration and has both a lower TOC and LI (10·72 mg C l⁻¹, LI, −0·49). Copper coupons were exposed to biofilm isolates (24 h), washed and resuspended in Adelaide metropolitan and Adelaide Hills water. Copper coupons not exposed to biofilm isolates were suspended in respective waters as a control. After 5 d of incubation, the copper content of Adelaide Hills water (4·71 ± 0·87 mg Cu l⁻¹), in which the copper coupons were suspended, consistently exceeded values obtained in the metropolitan Adelaide water (1·17 ± 0·249 mg Cu l⁻¹). The concentration of copper in the Adelaide Hills water was influenced by the bacterial species forming the biofilm on the coupon, with Agrobacterium sp. producing significantly higher levels of soluble copper than the control. The experiments reported here indicate that the suspended organic carbon, the aggressivity of the water and the biofilm may independently or synergistically increase the dissolution of copper from pipes into drinking water.     

Stamen abscission and water balance in Metrosideros flowers

Cymules (3-flowered units borne on single pedicels) were cut from inflorescences of Metrosideros collina J.R. & G. Forst. cv. Tahiti and used to test the effects of ethephon and ethylene on stamen abscission in the presence of silver thiosulphate (STS) and 1-methylcyclopropene (1-MCP), and to test the effects of holding solutions on cymule water balance and the progression of floral development. Flower bud and stamen abscission occurred in response to 0.5–5.0 and 0.1 μl l⁻¹ ethylene, respectively. Ethylene effects were partially negated by scrubbing exogenous ethylene, and more completely negated by STS (2.0 m M ). 1-MCP caused greater ethylene production and inhibited stamen abscission for only 1–2 days after treatment. Ethephon (10-10 000 mg l⁻¹) induced stamen wilting rather than abscission, an effect that was not negated by STS. Stamen wilting was negatively correlated with stamen relative water content, and the increase in stamen wilting was generally reduced by treatments that enhanced cymule mass. Stamen wilting was least using a 100 g l⁻¹ sucrose pulse or holding solutions containing 30–40 g l⁻¹ sucrose, with hydroxyquinoline citrate (200 mg l⁻¹) maintained at pH 5. Our results indicate that 1-MCP may be relatively ineffective in blocking the effects of ethylene on the abscission of organs, such as the stamens of M . collina , which are highly sensitive to this hormone.     

The survival of smolts of salmon Salmo salar L. at low concentrations of dissolved oxygen

The survival of Atlantic salmon smolts on sudden exposure to low constant concentrations of dissolved oxygen (DO) has been measured under laboratory conditions; the 3-d LC50 is about 3 mg l⁻¹ in freshwater and about 2.5 mg l⁻¹ in 30% and 80%'sea water', even for fish acclimated for several days to low concentrations of DO and high salinity; median threshold concentrations of DO are probably close to 3.3 and 2.6 mg l⁻¹ respectively.     

The effects of variable nitrogen and phosphorous concentrations on Eriophorum vaginatum tillers grown in nutrient solutions

Eriophorum vaginatum tillers were collected at Eagle Creek, Alaska and cultivated in aerated solutions under controlled environmental conditions. The nutrient solutions contained traces, 1.05 and 21 mg l⁻¹ N (nitrate) and traces, 0.15 and 3.10 mg l⁻¹ P (phosphate), pH was maintained at 5.5. The high N, 21 mg l⁻¹, and P, 3.18 mg l⁻¹, nutrient solution produced significant biomass increases. Functional leaf areas were significantly enhanced by high N and P doses in the solutions. Root surface areas varied considerably between treatments; however, significant differences were not found. The mean root surface area of a tiller reached 126 cm² (range 35–290 cm²), whereas the functional leaf area was 6.8 cm² (range 3.3–20.3 cm²). Tillers growing in the highest N + P solutions produced twice the number of daughter tillers as tillers growing in solutions with trace amounts of N and P.     

The spermatozoon of the African catfish: fine structure, motility, viability and its behaviour in seminal vesicle secretion

The spermatozoon of the African catfish Clarias gariepinus is a simple organized aquasperm although it reveals very unique characteristics: the cytoplasmic channel is lacking, the mitochondria form a complex structure and the arrangement of the centriolar complex is species specific. Semen has high initial motility rates ( c. 70–90%) and swimming velocities ( c. 120–140 μm s⁻¹), the main swimming type is linear. Motility duration in water is 30 s and is prolonged only to 40 s in NaCl solutions or more complex bu ered motility activating saline solutions. A pH between 7.0 and 9.0 has no e ect on the sperm motility parameters. Motility is completely and reversibly suppressed in electrolyte and non-electrolyte solutions with an osmolality of 200 mosmol kg⁻¹. During immotile storage the sperm viability is influenced by the osmolality and the potassium levels of the storage medium, by the temperature and by the dilution. At optimal conditions (bu ered sperm motility inhibiting saline solution: 150 mmol l⁻¹ NaCl, 2.5 mmol l⁻¹ KCl, 1 mmol l⁻¹ CaCl₂, 1 mmol l⁻¹ MgSO₄, 20 mmol l⁻¹ Tris solution, pH 8.5; dilution rate 1: 5; storage temperature, 4°C) sperm viability persists for >7 days. High viscosity of the pure seminal vesicle secretion completely inhibits the sperm motility. When the seminal vesicle secretion is diluted in water the viscosity decreases and the motility suppressing e ect is neutralized. When semen is mixed with seminal vesicle secretion the sperm viability decreases to zero within 10 min.     

Co-metabolism and microbial growth in the biodegradation of alkylbenzenesulphonates

Two organisms, CCMI507 and CCMI852, degrading undecylbenzenesulphonate (LAS) by the ortho- and meta- cleavage pathways were studied in cultures where glucose was used as carbon and energy source. CCMI507 ( ortho -pathway) started the degradation of LAS at the beginning of the culture development in parallel with glucose utilization. The degradation followed a steady profile of degradation until 77% of LAS was degraded in the culture containing initially 5 mg l⁻¹ of the compound and 81% in the cultures containing initially 10 and 20 mg l⁻¹ of LAS, after 72 h fermentation. The organism CCMI852 ( meta -pathway) started degrading the compound only after 20 h, when 75% of glucose was spent and well within the stationary phase. After 72 h fermentation the level of degradation by CCMI852 varied from 70% (5 mg l⁻¹ of LAS) to around 75% (10 and 20 mg l⁻¹ of LAS).     

Production of poly-3-hydroxybutyrate from lactose and whey by Methylobacterium sp. ZP24

Methylobacterium sp. ZP24, isolated from a local pond, is able to grow in a medium containing 12 g l⁻¹ lactose as a sole source of carbon, giving 5·25 g l⁻¹ biomass yield and poly-3-hydroxybutyrate (PHB) up to 59% of its dry weight in 40 h. The isolate was also able to utilize cheese whey and produce 1·1 g l⁻¹ PHB. Addition of ammonium sulphate increased the production of PHB from whey 2·5-fold. The potential of Methylobacterium sp. ZP24 in PHB production from cheese whey is discussed.     

Growth, mineral uptake and skeletal calcium deposition in brown trout, Salmo trutta L., yolk-sac fry exposed to aluminium and manganese in soft acid water

In 30-day exposures in artificial soft water medium, survival of brown trout alevins was not affected by low pH (4.5,4.8, 5.4), by low calcium concentration (10.25 μmol l⁻¹) or by manganese (≤20 μmol l⁻¹), but was impaired by aluminium (6–8 μmol l⁻¹) at low calcium concentration (10 μmol l⁻¹) irrespective of pH (4.5 or 5.4). Manganese (6.6, 20 μmol l⁻¹) impaired net calcium uptake and calcium deposition in the skeleton at low calcium concentration (25 μmol l⁻¹) irrespective of pH. Aluminium (2–8 μmol l⁻¹) impaired gross development, net uptake of calcium, potassium and sodium, and calcium deposition in the skeleton, and slightly increased the net loss of magnesium, some of these effects being more severe at calcium concentration 10 μmol l⁻¹ than 50 μmol l⁻¹, and some more severe at pH 5.4 than pH 4.5. Net uptake of calcium and sodium were impaired at low pH (4.5, 4.8), and skeletal calcium deposition was impaired at low calcium concentration (10 μmol l⁻¹), but these effects of low pH and low calcium concentration were slight compared with those of the trace metals. The possible role of trace metals in reports of the deleterious effects on fish of low pH levels is discussed.     

The toxicity of iron to brown trout and effects on the gills: a comparison of two grades of iron sulphate

The 96-h LC₅₀ on brown trout Salmo trutta of a commercial iron (III) sulphate liquor, used for treating reservoirs to reduce algal growth, was 28 mg total Fe l⁻¹ (0·05 mg soluble Fe l⁻¹). The 96-h LC₅₀ for analar grade iron (III) sulphate was 47 mg total Fe l⁻¹ (0·24 mg soluble Fe l⁻¹). Lethal and sublethal exposure to both grades of iron resulted in accumulation on the gill, which appears to be the main target for iron toxicity. Greater iron accumulation occurred during exposure to commercial iron sulphate liquor. Physical clogging of gills and gill damage was seen during lethal and sublethal exposure to iron. Gill tissue analysis showed no evidence of iron uptake into gill tissues during lethal or sublethal exposure to iron. Iron did not accumulate in plasma of fish exposed to iron compared to controls. Respiratory disruption due to physical clogging of the gills is suggested as a possible mechanism for iron toxicity.     

Optimization of D-ribose production with a transketolase-affected Bacillussubtilis mutant strain in glucose and gluconic acid-based media

When the transketolase-deficient and D -ribose-producing Bacillus subtilis strain ATCC 21951 was grown in a glucose (200 g l⁻¹)-based medium (Kintaka et al. 1986), only 11 g l⁻¹ D -ribose was synthesized, in addition to acetic acid (12 g l⁻¹) and acetoin plus 2,3-butanediol (24 g l⁻¹), within 1 week of fermentation. After optimizing the process conditions at 2 l fermentor scale (simplified medium composition, pH 5·0 or 6·0, highly oxidative (1000 rev min⁻¹, 3 vvm)), 40 g l⁻¹ D -ribose was obtained from 200 g l⁻¹ D -glucose, in addition to 14·5 g l⁻¹ acetoin, during 1 week of fermentation. By partially substituting D -glucose with D -gluconic acid (100 g l⁻¹ D -glucose plus 50 g l⁻¹ D -gluconic acid) under highly oxidative (1000 rev min⁻¹, 3 vvm) and pH-controlled (pH 6·5) conditions, D -ribose productivity increased (45 g l⁻¹) and acetoin formation (7·5 g l⁻¹) dropped, as did the fermentation time (3·5 d). The mixed carbon substrate procedure here developed provides an excellent alternative to the less efficient glucose-based processes described so far.     

Lipid formation and γ-linolenic acid production by Mucorales fungi grown on sunflower oil

Lipid formation and γ-linolenic acid (GLA) production by 48 species of Mucorales fungi grown on sunflower oil (which consists of 70% linoleic acid ; LA) were studied. The strains accumulated 42·7–65·8% lipid in biomass (7·66–13·39 g l⁻¹). Eight cultures produced more than 200 mg GLA l⁻¹. Highest GLA yields exhibited Mucor mucedo CCF-1384 and Cunninghamella echinulata CCF-103 (379 and 373 mg l⁻¹, respectively). Mortierella alpina CCF-185 synthesized 465 mg l⁻¹ arachidonic acid. While the decrease of LA utilization index (ratio of LA content of cell lipid/LA content of oil source) was accompanied with growth of delipidized biomass and with reduction of lipid accumulation within the cells, high lipid yield was as a consequence of the direct oil source incorporation into intracellular lipid.