Interactions of dichloro-bis(η5-cyclopentadienyl)titanium(IV) with nucleosides

The interactions of dichloro-bis(η⁵-cyclopentadienyl)titanium(IV) (titanocene dichloride, Cp₂TiCl₂) with nucleosides have been studied in methanolic solutions. Complexes of the general formula [Cp₂Ti(Nucl)MeOH]Cl₂ were isolated. The nucleoside complexes with one N(1)H ionizable imino proton (i.e. inosine and guanosine) undergo ionization in alkaline solution and complexes of the formula [Cp₂Ti(NuclH⁺)] Cl were isolated. All complexes have been characterized by elemental analyses and various spectroscopic techniques. In the first series of complexes, [Cp₂Ti(Nucl)MeOH]Cl₂, the nucleosides act as monodentate ligands with an intramolecular hydrogen bond between the coordinated methanol and the C6O group, while in the second, [Cp₂Ti(NuclH⁺)] Cl, they coordinate through both their N7 and O6 atoms.     

Complex-Formation of Ethidium Bromide with Poly[d(A-T)]·Poly[d(A-T)]

Abstract

The interaction of Ethidium Bromide (EtBr) with double-stranded (ds-) and single-stranded (ss-) poly[d(A-T)] was studied in different ionic strengths solutions. Optical spectroscopy and Scatchard analysis results indicate that the ligand interacts to both helix and coiled structures of the polynucleotide by “strong” and “weak” binding modes. The association parameters (binding constant—K—and the number of nucleotides corresponding to a binding site—n) of the strong type of interaction were found to be independent of Na+ concentration. Weak interaction occurs at low ionic strength and/or high EtBr concentration. Estimated binding parameters of EtBr with ss- and ds-polynucleotide are in good agreement with those for EtBr-B-DNA complexes. Data obtained provided an evidence for a stacking interaction of EtBr with single stranded poly[d(A-T)].     

Biological assays and noncovalent interactions of pyridine-2-carbaldehyde thiosemicarbazonecopper(II) drugs with [poly(dA–dT)]2, [poly(dG–dC)]2, and calf thymus DNA

The interaction of the Cu(II) drugs CuL(NO₃) and CuL′(NO₃) (HL is pyridine-2-carbaldehyde thiosemicarbazone and HL′ is pyridine-2-carbaldehyde 4N-methylthiosemicarbazone, in water named [CuL]⁺ and [CuL′]⁺) with [poly(dA–dT)]₂, [poly(dG–dC)]₂, and calf thymus (CT) DNA has been probed in aqueous solution at pH 6.0, I = 0.1 M, and T = 25 °C by absorbance, fluorescence, circular dichroism, and viscosity measurements. The results reveal that these drugs act as groove binders with [poly(dA–dT)]₂, with a site size n = 6–7, whereas they act as external binders with [poly(dG–dC)]₂ and/or CT-DNA, thus establishing overall electrostatic interaction with n = 1. The binding constants with [CuL′]⁺ were slightly larger than with [CuL]⁺. The title compounds display some cleavage activity in the presence of thiols, bringing about the rupture of the DNA strands by the reactive oxygen species formed by reoxidation of Cu(I) to Cu(II); this feature was not observed in the absence of thiols. Mutagenic assays performed both in the presence and in the absence of S9 mix, probed by the Ames test on TA 98, TA 100, and TA 102, were negative. Weak genotoxic activity was detected for [CuL]⁺ and [CuL′]⁺, with a significative dose–response effect for [CuL′]⁺, which was shown to be more cytotoxic in the Ames test and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide cell proliferation assays. Methylation of the terminal NH₂ group enhances the antiproliferative activity of the pyridine-2-carbaldehyde thiosemicarbazones.     

Carbohydrate adducts with zinc-group-metal ions. Interactions of β-d-fructose with Zn(II), Cd(II), and Hg(II) cations,and the effects of metal-ion coordination on the sugar isomer binding

Interaction of β-d-fructose with hydrated salts of zinc-group-metal has been studied in aqueous solution and solid adducts of the type M(d-fructose)X₂·nH₂O, where M = Zn(II), Cd(II), and Hg(II) ions, X = Cl⁻ or Br⁻, and n = 0–2, have been isolated, and characterized by means of F.t.-i.r. spectroscopy, X-ray powder diffraction, and molar conductivity measurements. The marked spectral similarities observed with the Mg(d-fructose)X₂·4 H₂O (X = Cl⁻ or Br⁻) compounds indicated that the Zn(II) and Cd(II) ions are six-coordinated, binding to two d-fructose molecules through O-2, O-3 of the first d-fructose, and O-4, O-5 of the second, as well as to two H₂O. The Hg(II) ion binds to two sugar moieties in the same fashion as do the Zn(II) and Cd(II) ions, resulting in four-coordination geometry around the mercury ion. The crystalline sugar is in the β-d-fructopyranose form, and the coordination of the of the Ca(II) ion takes place through the β-d-fructopyranose isomer, whereas the binding of the Mg(II), Zn(II), Cd(II), Hg(II), and UO²⁺₂ cations could be via the β-d-fructopyranose and the β-d-fructofuranose structures.     

Four- versus five-coordination in platinum(II) complexes of α-diimines and the crystal structure of [PtClMe(i-PrNCHCHNi-Pr)]

The complex [PtCIMe(i-PrNCHCHNi-Pr)] and its unstable five-coordinate ethylene adduct have been prepared and characterized by ¹H NMR. The crystal and molecular structure of the former has been determined. The complex crystallizes in the orthorhombic space group Pca2 ₁, with a = 12.138(6), b = 9.601(6), c = 10.586(6)Å, Z = 4. Refinement converged to a final R index of 0.059. The geometrical parameters of the structure are compared with those of a related complex and discussed in relation to the stability of the five-coordinate olefin adducts.     

Synthesis and structure of the complex tetra-μ-prolinatodirhodium(II)

The dinuclear Rh^IIRh^II complex with proline [Rh₂(pro₄][NEt₄]₂ was synthesized and its structure studied by means of spectroscopic (IR, EPR and ESCA) and magnetochemical methods. It was shown that two proline molecules serve as bridging ligands, while the other two are only axially coordinated through their N atoms.     

Structural diversity of neutral bis-(β-iminoaldehyde) complexes of nickel(II)

Series of Ni^II and Cu^II complexes with dianionic [N₂O₂] ligands were synthesized and characterised applying spectroscopic and X-ray diffraction techniques. The ligands were obtained by 1:2 condensation of ethylene- and propylenediamine with malonic aldehyde derivatives (R² = H, R¹ = H or OCH₃). Although the molecular formulae of the complexes are quite similar, the X-ray investigations have proved a significant structural diversity in the solid state. Among others, we found some simple nearly planar molecules stacked in the crystal lattice with electron density of six-membered rings delocalised over the chelate rings as well as some very complex polymeric or nickel acetate bridged trinuclear complexes. The coordination of the nickel ion by surrounding oxygen and nitrogen atoms is square-planar in the simplest case and octahedral in the most complex one. Small topological differences in similar molecules generate completely different crystal structures.From magnetic studies, a small, negative value of J obtained confirms the occurrence of weak antiferromagnetic interactions between the Ni^II ions in polymeric chain of the propylenediamine dialdehyde substituted derivative.     

A kinetic model for the B–Z transition of poly[d(G-C)]·poly[d(G-C)] and poly[d(G-m5C)]·poly[d(G-m5C)]

The analysis of the kinetic data of the B-Z conformational changes induced by salt in sized double-stranded poly[d(G-C)].poly[d(G-C)] and poly[d(G-m5C)].poly[d(G-m5C)] polymers indicated that there exists a salt threshold which reveals some largely, as yet, unrecognised characteristics of the transition. It was observed that there is a direct correlation between the length of the polymer and the rate of the B-Z transition when the salt concentration in the polymer solution is lower than the salt threshold. The correlation is inverse when the salt concentration is higher than the salt threshold. Thus, the molecular mechanism of the B- to Z-DNA transition varies depending on whether the salt concentration is higher or lower than the threshold. In this context, we have found that the contrasting results reported in the literature describing the rate of the B-Z transition are not contradictory but complementary. The finding of a salt threshold leads to the establishment of a relationship between the cooperativity index of the B-Z transition and the polymer chain length. That relationship is dependent on the chemical structure of the polymer but is temperature independent.     

Structural properties and inversion mechanisms of [Rh(dippe)(μ-SR)]2 complexes

Several new bis-thiolate complexes of the type [Rh(dippe)(μ-SR)]₂ where R=H, methyl, cyclohexyl, o-biphenyl, and phenyl, or (SR)₂SCH₂CH₂CH₂S have been synthesized and characterized by NMR spectroscopy and single crystal X-ray diffraction. All [Rh(dippe)(μ-SR)]₂ complexes except [Rh(dippe)(μ-SPh)]₂ exhibit bent geometries, while the orientation of the thiolato substituents changes with increasing steric bulk. ¹H and ³¹P NMR spectroscopies indicate that both ring inversion and sulfur inversion occur among the members of the series, which allows them to access several isomeric forms when they are in solution. ³¹P NMR spectroscopy indicates that sulfur inversion in [Rh(dippe)(μ-SH)]₂, [Rh(dippe)(μ-Sbiphenyl)]₂, and [Rh(dippe)(μ-SPh)]₂ is a non-dissociative process.     

The effect of protonation on [Mn(IV)(μ2-O)]2 complexes

The series of complexes [Mn(IV)(X-SALPN)(₂-O)]₂, 1: X=5-OCH₃; 2: X=H; 3: X=5-Cl; 4: X=3,5-diCl; 5: X=5-NO₂, contain [Mn₂O₂]⁴⁺ cores with Mn-Mn separations of 2.7 . These molecules can be protonated to form [Mn(IV)(X-SALPN)(₂-O,OH)]₂ ⁺ in which a bridging oxide is protonated. The pK_a values for the series of [Mn(IV)(X-SALPN)(₂-O,OH)]₂ ⁺ track linearly versus the shift in redox potential with a slope of 84 mV/pKa. This observation suggests that the [Mn₂O₂]⁴⁺ core can be considered as a unit in which the free energy of protonation is directly related to the ability to reduce the Mn(IV) ion. The marked sensitivity of the reduction potential to the presence of protons presents a mechanism in which an enzyme can control the oxidizing capacity of an oxo manganese cluster by the degree and timing of oxo bridge protonation.Abbreviations AnH⁺CF₃SO₃ ^- anilinium triflate - DMA N,N-dimethyl acetamide - H₂SALPN 1,3-bis(salicylideneiminato)propane - H₂(5-Cl-SALPN) 1,3-bis(5-chlorosalicylideneiminato)propane; - H₂(3,5-diCl-SALPN) 1,3-bis(3,5-dichlorosalicylideneiminato)propane - H₂(5-NO₂-SALPN) 1,3-bis(5-nitorosalicylideneiminato)propane - H₂(5-OMe-SALPN) 1,3-bis(5-methoxysalicylideneiminato)propane - LuH⁺CF₃SO₃ ^- 2,4-lutidinium triflate - ME₃NH⁺Ph₄B^- trimethylammonium tetraphenylborate - OEC oxygen evolving complex - PyH⁺ClO₄ ^- pyridinium perchlorate - SCE saturated calomel electrode     

Interactions of β-lactoglobulin with serotonin and arachidonyl serotonin

β‐Lactoglobulin (β‐LG) is a lipocalin, which is the major whey protein of cow's milk and the milk of other mammals. However, it is absent from human milk. The biological function of β‐LG is not clear, but its potential role in carrying fatty acids through the digestive tract has been suggested. β‐LG has been found in complexes with lipids such as butyric and oleic acids and has a high affinity for a wide variety of compounds. Serotonin (5‐hydroxytryptamine, 5‐HT), an important compound found in animals and plants, has various functions, including the regulation of mood, appetite, sleep, muscle contraction, and some cognitive functions such as memory and learning. In this study, the interaction of serotonin and one of its derivatives, arachidonyl serotonin (AA‐5HT), with β‐LG was investigated using circular dichroism (CD) and fluorescence intensity measurements. These two ligands interact with β‐LG forming equimolar complexes. The binding constant for the serotonin/β‐LG interaction is between 10⁵ and 10⁶ M⁻¹, whereas for the AA‐5HT/β‐LG complex it is between 10⁴ and 10⁵ M⁻¹ as determined by measurements of either protein or ligand fluorescence. The observed binding affinities were higher in hydroethanolic media (25% EtOH). The interactions between serotonin/β‐LG and AA‐5HT/β‐LG may compete with self‐association (micellization) of both the ligand and the protein. According to far‐ and near‐UV CD results, these ligands have no apparent influence on β‐LG secondary structure, however they partially destabilize its tertiary structure. Their binding by β‐LG may be one of the peripheral mechanisms of the regulation of the content of serotonin and its derivatives in the bowel of milk‐fed animals. © 2011 Wiley Periodicals, Inc. Biopolymers 95: 871–880, 2011.     

Kinetics and mechanism of the reaction between the di-μ-cyanobis[tetracyanoferrate(III)] complex ion and sulfite in aqueous solution

The kinetics of the stepwise reduction of the title complex [Fe₂(CN)₁₀]⁴⁻ by sulfite have been studied in the presence of air as a function of pH, sulfite concentration, temperature and ionic strength using stopped-flow and conventional spectrophotometric techniques. The k_obs versus pH profile shows a marked increase in rate with increase of pH over the range 3.7 ? pH ? 6.1 due to the increase in concentration of the more reactive sulfite species . The reaction proceeds in several stages, the first of which involves a one electron transfer process with the formation of the radical anion This then adds on in a rapid stage to form a species . The second and third stages also involve one electron transfer. In the third, or possibly a fourth stage cleavage occurs, the final product being [Fe^II(CN)₅(SO₃)]⁵⁻. The reaction rate is sensitive to the nature of the cation present with a reactivity sequence .     

Complexes of Co(II), Ni(II), Cu(II) and Zn(II) with 3′AMP and 2′AMP

Derivatives of Co(II), Ni(II), Cu(II) and Zn(II) with 3′AMP and 2′AMP were synthesized and characterized by IR UV-Vis and fluorescence spectroscopy. There seems to be bonding of the metal ion to the base in all cases. The activation test, using the complexes as allosteric labels, was carried out with rabbit muscle glycogen phosphorylase b, but the enzyme was not activated, confirming that the phosphate group must necessarily be bonded to position 5′ of the ribose in order to activate this enzyme.     

Antioxidant and Cytoprotective Activity of Oxydiacetate Complexes of Cobalt(II) and Nickel(II) with 1,10-Phenantroline and 2,2′-Bipyridine

Biological Trace Element Research - The antioxidant properties of oxydiacetate complexes of cobalt(II) and nickel(II) with 1,10-phenantroline and 2,2′-bipyridine have been investigated...     

The mechanism of antimalarial action of the ruthenium(II)–chloroquine complex [RuCl2(CQ)]2

The mechanism of antimalarial action of the ruthenium-chloroquine complex [RuCl(2)(CQ)](2) (1), previously shown by us to be active in vitro against CQ-resistant strains of Plasmodium falciparum and in vivo against P. berghei, has been investigated. The complex is rapidly hydrolyzed in aqueous solution to [RuCl(OH(2))(3)(CQ)](2)[Cl](2), which is probably the active species. This compound binds to hematin in solution and inhibits aggregation to beta-hematin at pH approximately 5 to a slightly lower extent than chloroquine diphosphate; more importantly, the heme aggregation inhibition activity of complex 1 is significantly higher than that of CQ when measured at the interface of n-octanol-aqueous acetate buffer mixtures under acidic conditions modeling the food vacuole of the parasite. Partition coefficient measurements confirmed that complex 1 is considerably more lipophilic than CQ in n-octanol-water mixtures at pH approximately 5. This suggests that the principal target of complex 1 is the heme aggregation process, which has recently been reported to be fast and spontaneous at or near water-lipid interfaces. The enhanced antimalarial activity of complex 1 is thus probably due to a higher effective concentration of the drug at or near the interface compared with that of CQ, which accumulates strongly in the aqueous regions of the vacuole under those conditions. Furthermore, the activity of complex 1 against CQ-resistant strains of P. falciparum is probably related to its greater lipophilicity, in line with previous reports indicating a lowered ability of the mutated transmembrane transporter PfCRT to promote the efflux of highly lipophilic drugs. The metal complex also interacts with DNA by intercalation, to a comparable extent and in a similar manner to uncomplexed CQ and therefore DNA binding does not appear to be an important part of the mechanism of antimalarial action in this case.     

Synthesis and structure of μ-3,3′-[ 1,2-ethanediyl-bis(nitrilomethylidyne)-bis(2-hydroxybenzoato)] aquadicopper(II) hydrate

The complex μ-3,3′-[1,2-ethanediyl-bis(nitrilome- thylidyne)-bis(2-hydroxybenzoato)] aquadicopper(II) hydrate, C₁₈H₁₆N₂O₈Cu₂, was isolated from an attempted preparation of a copper lanthanum binuclear complex. The dark purple crystals are monoclinic, space group P2₁/n, with 4 molecules per unit cell; dimensions a = 13.961(5), b = tl.787(3), c = 11.622(3) Å and β = 113.09(2)°. The final R was 0.046 for the 2062 reflections used in the analysis. The Cu atom in the N₂O₂ cavity is five coordinate with CuN distances of 1.879 and 1.880 Å and CuO distances of 1.898 and 1.900 Å. A water molecule at 2.557 Å completes the square pyramidal arrangement. The second Cu in the O₄ cavity is square planar, with CuO distances to the bridging oxygens of 1.914 and 1.909 Å and to the carboxy oxygens of 1.871 and 1.882 Å. A survey of copper complexes in a square planar N₂O₂ arrangement has led to the equation δCu from the N₂O₂ plane = 0.822 – 0.275 (CuO axial distance) with a correlation coefficient of 0.98 for the 12 structures in which the Cu atom is bonded to a fifth oxygen atom. A model for the transition from square planar to square pyramidal geometry is proposed.     

Binding of α-synuclein with Fe(III) and with Fe(II) and biological implications of the resultant complexes

Parkinson’s disease (PD) is hallmarked by the abnormal intracellular inclusions (Lewy bodies or LBs) in dopaminergic cells. Amyloidogenic protein α-synuclein (α-syn) and iron (including both Fe(III) and Fe(II)) are both found to be present in LBs. The interaction between iron and α-syn might have important biological relevance to PD etiology. Previously, a moderate binding affinity between α-syn and Fe(II) (5.8 × 10³ M⁻¹) has been measured, but studies on the binding between α-syn and Fe(III) have not been reported. In this work, electrospray mass spectrometry (ES-MS), cyclic voltammetry (CV), and fluorescence spectroscopy were used to study the binding between α-syn and Fe(II) and the redox property of the resultant α-syn-Fe(II) complex. The complex is of a 1:1 stoichiometry and can be readily oxidized electrochemically and chemically (by O₂) to the putative α-syn-Fe(III) complex, with H₂O₂ as a co-product. The reduction potential was estimated to be 0.025 V vs. Ag/AgCl, which represents a shift by −0.550 V vs. the standard reduction potential of the free Fe(III)/Fe(II) couple. Such a shift allows a binding constant between α-syn and Fe(III), 1.2 × 10¹³ M⁻¹, to be deduced. Despite the relatively high binding affinity, α-syn-Fe(III) generated from the oxidation of α-syn-Fe(II) still dissociates due to the stronger tendency of Fe(III) to hydrolyze to Fe(OH)₃ and/or ferrihydrite gel. The roles of α-syn and its interaction with Fe(III) and/or Fe(II) are discussed in the context of oxidative stress, metal-catalyzed α-syn aggregation, and iron transfer processes.