Response to commentary by Woinarski (Critical‐weight‐range marsupials in northern Australia are declining: a commentary on Fisher et al. (2014) ‘The current decline of tropical marsupials in Australia: is history repeating?’)

The recent commentary by Woinarski (2014, Global Ecology and Biogeography, doi: 10.1111/geb.12165) disagreed with our conclusions on the correlates of decline in the marsupials of tropical Australia (Fisher et al., 2014, Global Ecology and Biogeography, 23 , 181–190). We compared traits of species that were associated with range decline in southern and northern Australia. We found that habitat structure, climate and body size were correlated with range decline. In the north, declines of marsupials were most severe in savanna with moderate rainfall. In the south, the ranges of species in open habitat with very low rainfall have declined most. Also, the association between range decline and body mass differed between north and south: this is the main concern of Woinarski, who further disagreed with our choice of the Tropic of Capricorn as a boundary between north and south, our omission of rodents, how to treat timing of extinctions, and our inference that cats are major drivers of decline. We address these concerns in this response.     

Critical‐weight‐range marsupials in northern Australia are declining: a commentary on Fisher et al. (2014) ‘The current decline of tropical marsupials in Australia: is history repeating?’

Many mammal species are declining in parts of Australia's tropical savannas, for reasons that are not yet well defined. A recent paper (Fisher et al., 2014, Global Ecology and Biogeography, 23 , 181–190) suggested that the primary cause is predation by feral cats, with the main evidence presented being a purported over‐representation of small species amongst the marsupials that have contracted in range (‘small body size signifies high current extinction risk’). However, a review here of the information presented in that paper shows that no marsupial species smaller than 100 g has shown range contraction in northern Australia, and that most (15 of 17) declines are of species in the ‘critical weight range’ (35 g to 5.5 kg).     

Correlates of Recent Declines of Rodents in Northern and Southern Australia: Habitat Structure Is Critical

Australia has experienced dramatic declines and extinctions of its native rodent species over the last 200 years, particularly in southern Australia. In the tropical savanna of northern Australia significant declines have occurred only in recent decades. The later onset of these declines suggests that the causes may differ from earlier declines in the south. We examine potential regional effects (northern versus southern Australia) on biological and ecological correlates of range decline in Australian rodents. We demonstrate that rodent declines have been greater in the south than in the tropical north, are strongly influenced by phylogeny, and are consistently greater for species inhabiting relatively open or sparsely vegetated habitat. Unlike in marsupials, where some species have much larger body size than rodents, body mass was not an important predictor of decline in rodents. All Australian rodent species are within the prey-size range of cats (throughout the continent) and red foxes (in the south). Contrary to the hypothesis that mammal declines are related directly to ecosystem productivity (annual rainfall), our results are consistent with the hypothesis that disturbances such as fire and grazing, which occur in non-rainforest habitats and remove cover used by rodents for shelter, nesting and foraging, increase predation risk. We agree with calls to introduce conservation management that limits the size and intensity of fires, increases fire patchiness and reduces grazing impacts at ecological scales appropriate for rodents. Controlling feral predators, even creating predator-free reserves in relatively sparsely-vegetated habitats, is urgently required to ensure the survival of rodent species, particularly in northern Australia where declines are not yet as severe as those in the south.     

Declining populations in one of the last refuges for threatened mammal species in northern Australia

Australia has contributed a disproportionate number of the world's mammal extinctions over the past 200 years, with the greatest loss of species occurring through the continent's southern and central arid regions. Many taxonomically and ecologically similar species are now undergoing widespread decline across the northern Australian mainland, possibly driven by predation by feral cats and changed fire regimes. Here, we report marked recent declines of native mammal species in one of Australia's few remaining areas that support an intact mammal assemblage, Melville Island, the largest island off the northern Australian coast. We have previously reported a marked decline on Melville Island of the threatened brush‐tailed rabbit‐rat (Conilurus penicillatus) over the period 2000–2015, linked to predation by feral cats. We now report a 62% reduction in small mammal trap‐success and a 36% reduction in site‐level species richness over this period. There was a decrease in trap‐success of 90% for the northern brown bandicoot (Isoodon macrourus), 64% for the brush‐tailed rabbit‐rat and 63% for the black‐footed tree‐rat (Mesembriomys gouldii), but no decline for the common brushtail possum (Trichosurus vulpecula). These results suggest that populations of native mammals on Melville Island are exhibiting similar patterns of decline to those recorded in Kakadu National Park two decades earlier, and across the northern Australian mainland more generally. Without the implementation of effective management actions, these species are likely to be lost from one of their last remaining strongholds, threatening to increase Australia's already disproportionate contribution to global mammal extinctions.     

Changes in mammal populations in relatively intact landscapes of Kakadu National Park,Northern Territory,Australia

A previous study ( Braithwaite & Muller 1997 ) reported substantial declines in mammal abundance over the period 1986–1993 for a large study area (300 km²) within Kakadu National Park in the tropical savannas of northern Australia. This decline was reported as being a ‘natural’ response to fluctuating groundwater levels, driven by runs of poor wet seasons. We resampled mammals in this area in 1999, following a series of unusually good wet seasons, and examined the prediction that mammal numbers should have recovered. Increases in abundance were evident for four species: the smallest dasyurid (red‐cheeked dunnart Sminthopsis virginiae) and the three smallest rodents (delicate mouse Pseudomys delicatulus, western chestnut mouse Pseudomys nanus and grassland melomys Melomys burtoni). In contrast, the abundance of all mammals combined and that for seven individual mammal species (northern quoll Dasyurus hallucatus, fawn antechinus Antechinus bellus, common brushtail possum Trichosurus vulpecula, northern brown bandicoot Isoodon macrourus, dusky rat Rattus colletti, black‐footed tree‐rat Mesembriomys gouldii and pale field rat Rattus tunneyi) continued to decline. The decline in abundance of these mammal species is consistent with limited observations elsewhere in northern Australia. Although far from conclusive, these observations suggest that the biota of the vast relatively undisturbed tropical savannas can no longer be assumed to be intact nor safe. Further research is needed to test this possible pattern of decline and, if confirmed, to identify and ameliorate the processes contributing to it.     

Northern glacial refugia for the pygmy shrew Sorex minutus in Europe revealed by phylogeographic analyses and species distribution modelling

The southern European peninsulas (Iberian, Italian and Balkan) are traditionally recognized as glacial refugia from where many species colonized central and northern Europe after the Last Glacial Maximum (LGM). However, evidence that some species had more northerly refugia is accumulating from phylogeographic, palaeontological and palynological studies, and more recently from species distribution modelling (SDM), but further studies are needed to test the idea of northern refugia in Europe. Here, we take a rarely implemented multidisciplinary approach to assess if the pygmy shrew Sorex minutus, a widespread Eurasian mammal species, had northern refugia during the LGM, and if these influenced its postglacial geographic distribution. First, we evaluated the phylogeographic and population expansion patterns using mtDNA sequence data from 123 pygmy shrews. Then, we used SDM to predict present and past (LGM) potential distributions using two different training data sets, two different algorithms (Maxent and GARP) and climate reconstructions for the LGM with two different general circulation models. An LGM distribution in the southern peninsulas was predicted by the SDM approaches, in line with the occurrence of lineages of S. minutus in these areas. The phylogeographic analyses also indicated a widespread and strictly northern‐central European lineage, not derived from southern peninsulas, and with a postglacial population expansion signature. This was consistent with the SDM predictions of suitable LGM conditions for S. minutus occurring across central and eastern Europe, from unglaciated parts of the British Isles to much of the eastern European Plain. Hence, S. minutus likely persisted in parts of central and eastern Europe during the LGM, from where it colonized other northern areas during the late‐glacial and postglacial periods. Our results provide new insights into the glacial and postglacial colonization history of the European mammal fauna, notably supporting glacial refugia further north than traditionally recognized.     

Threatened mammals become more predatory after small‐scale prescribed fires in a high‐rainfall rocky savanna

Understanding mechanisms underlying fire regime effects on savanna fauna is difficult because of a wide range of possible trophic interactions and feedbacks. Yet, understanding mechanisms underlying fauna dynamics is crucial for conservation management of threatened species. Small savanna mammals in northern Australia are currently undergoing widespread declines and regional extinctions partly attributable to fire regimes. This study investigates mammal trophic and ecosystem responses to fire in order to identify possible mechanisms underlying these declines. Mammal trophic responses to fire were investigated by surveying mammal abundance, mammal diet, vegetation structure and non‐mammal fauna dynamics in savannas six times at eight sites over a period of 3 years. Known site‐specific fire history was used to test for trophic responses to post‐fire interval and fire frequency. Mammal and non‐mammal fauna showed only minor responses of post‐fire interval and no effect of fire frequency. Lack of fauna responses differed from large post‐fire vegetation responses. Dietary analysis showed that two mammal species, Dasyurus hallucatus and Isoodon auratus, increased their intake of large prey groups in recently burnt, compared to longer unburnt vegetation. This suggests a fire‐related change in trophic interactions among predators and their prey, after removal of ground‐layer vegetation. No evidence was found for other changes in food resource uptake by mammals after fire. These data provide support for a fire‐related top‐down ecosystem response among savanna mammals, rather than a bottom‐up resource limitation response. Future studies need to investigate fire responses among other predators, including introduced cats and dingoes, to determine their roles in fire‐related mammal declines in savannas of northern Australia.     

The Indochinese–Sundaic zoogeographic transition: a description and analysis of terrestrial mammal species distributions

Aim We describe the distributions of mammal species between the Indochinese and Sundaic subregions and examine the traditional view that the two faunas show a transition near the Isthmus of Kra on the Thai–Malay peninsula. Location Species distributions are described along a 2000‐km transect from 20° N (northernmost Thailand) to 1° N (Singapore). Methods For the 325 species of native non‐marine mammals occurring along the transect we used published records to provide a database of their distributional records by degree of latitude. Results Along the transect we found 128 Indochinese species with southern range limits, 121 Sundaic species with northern range limits, four un‐assignable endemics and 72 widespread species. In total, 152 southern and 147 northern range limits were identified, and their distribution provides no evidence for a narrow faunal transition near the Isthmus of Kra (10°30′ N) or elsewhere. Range limits of both bats and non‐volant mammals cluster in northernmost peninsular Malaysia (5° N) and 800 km further north, where the peninsula joins the continent proper (14° N). The clusters of northern and southern range limits are not concordant but overlap by 100–200 km. Similarly, the range limits of bats and non‐volant mammals cluster at slightly different latitudes. There are 30% fewer species and range limits in the central and northern peninsula (between 6 and 13° N), and 35 more widely distributed species have range gaps in this region. In addition, we found 70 fewer species at the southern tip of the peninsula (1° N) than at 3–4° N. Main conclusions The deficiencies of both species and species range limits in the central and northern peninsula are attributed to an area effect caused by repeated sea‐level changes. Using a new global glacioeustatic curve developed by Miller and associates we show that there were > 58 rapid sea‐level rises of > 40 m in the last 5 Myr that would have resulted in significant faunal compression and local population extirpation in the narrow central and northern parts of the peninsula. This new global sea‐level curve appears to account for the observed patterns of the latitudinal diversity of mammal species, the concentration of species range limits north and south of this area, the nature and position of the transition between biogeographical subregions, and possibly the divergence of the faunas themselves during the Neogene. The decline of species diversity at the southern end of the transect is attributed to a peninsula effect similar to that described elsewhere.     

Global warming and amphibian extinctions in eastern Australia

Abstract Pounds et al. recently argued that the dramatic, fungal pathogen‐linked extinctions of numerous harlequin frogs (Atelopus spp.) in upland rainforests of South America mostly occurred immediately following exceptionally warm years, implicating global warming as a likely trigger for these extinctions. I tested this hypothesis using temperature data for eastern Australia, where at least 14 upland‐rainforest frog species have also experienced extinctions or striking population declines attributed to the same fungal pathogen, and where temperatures have also risen significantly in recent decades. My analyses provide little direct support for the warm‐year hypothesis of Pounds et al., although my statistical power to detect effects of small (0.5°C) temperature increases was limited. However, I found stronger support for a modified version of the warm‐year hypothesis, whereby frog declines were likely to occur following three consecutive years of unusually warm weather. This trend was apparent only at tropical latitudes, where rising minimum temperatures were greatest. Although much remains uncertain, my findings appear consistent with the notion that global warming could predispose some upland amphibian populations to virulent pathogens.     

The synonymy and distribution of the crenaticeps-group of Atractomorpha Saussure, 1862 (Orthoptera, Acridoidea, Pyrgomorphidae)

The general distribution of Atractomorpha australis Rehn, A. similis Bolívar and A. crenaticeps (Blanchard) in Australia and the South Pacific is discussed. Detailed synonymies and lists of known localities are given for each species, together with a distribution map. A. australis is confined to cooler, moister regions of Australia from eastern Victoria to south-western Queensland; A. similis is more tropical, occurring in the southern Moluccas, Timor, southern New Guinea and associated islands to northern and eastern Australia, but it extends, in suitable localities, as far south as central New South Wales, and, in inland areas, even to north-western Victoria and south-eastern South Australia; A. crenaticeps , formerly thought to embrace both the above species, is restricted to the northern Moluccas, western and other parts of New Guinea north of and including the central mountain chains and associated islands to the north and west, and to the Bismarck Archipelago and the Solomon Islands.     

Pathogen pollution and the emergence of a deadly amphibian pathogen

Imagine a single pathogen that is responsible for mass mortality of over a third of an entire vertebrate class. For example, if a single pathogen were causing the death, decline and extinction of 30% of mammal species (including humans), the entire world would be paying attention. This is what has been happening to the world's amphibians – the frogs, toads and salamanders that are affected by the chytrid fungal pathogen, Batrachochytrium dendrobatidis (referred to as Bd), which are consequently declining at an alarming rate. It has aptly been described as the worst pathogen in history in terms of its effects on biodiversity (Kilpatrick et al. 2010). The pathogen was only formally described about 13 years ago (Longcore et al. 1999), and scientists are still in the process of determining where it came from and investigating the question: why now? Healthy debate has ensued as to whether Bd is a globally endemic organism that only recently started causing high mortality due to shifting host responses and/or environmental change (e.g. Pounds et al. 2006) or whether a virulent strain of the pathogen has rapidly disseminated around the world in recent decades, affecting new regions with a vengeance (e.g. Morehouse et al. 2003; Weldon et al. 2004; Lips et al. 2008). We are finally beginning to shed more light on this question, due to significant discoveries that have emerged as a result of intensive DNA‐sequencing methods comparing Bd isolates from different amphibian species across the globe. Evidence is mounting that there is indeed a global panzootic lineage of Bd (BdGPL) in addition to what appear to be more localized endemic strains (Fisher et al. 2009; James et al. 2009; Farrer et al. 2011). Additionally, BdGPL appears to be a hypervirulent strain that has resulted from the hybridization of different Bd strains that came into contact in recent decades, and is now potentially replacing the less‐virulent endemic strains of the pathogen (Farrer et al. 2011). In a new study published in this issue of Molecular Ecology, Schloegel et al. (2012) identify an additional unique Bd lineage that is endemic to the Atlantic Brazilian rainforests (Bd‐Brazil) and provide striking evidence that the Bd‐Brazil lineage has sexually recombined with the BdGPL lineage in an area where the two lineages likely came into contact as a result of classic anthropogenically mediated ‘pathogen pollution’(see below). Fungal pathogens, including Bd, have the propensity to form recombinant lineages when allopatric populations that have not yet formed genetic reproductive barriers are provided with opportunities to intermingle, and virulent strains may be selected for because they tend to be highly transmissible (Fisher et al. 2012). As Schloegel et al. (2012) point out, the demonstrated ability for Bd to undergo meiosis may also mean that it has the capacity to form a resistant spore stage (as yet undiscovered), based on extrapolation from other sexually reproducing chytrids that all have spore stages.     

Arid Recovery – A comparison of reptile and small mammal populations inside and outside a large rabbit,cat and fox‐proof exclosure in arid South Australia

Australian arid zone mammal species within the Critical Weight Range (CWR) of 35 g–5.5 kg have suffered disproportionately in the global epidemic of contemporary faunal extinctions. CWR extinctions have been attributed largely to the effects of introduced or invasive mammals; however, the impact of these threatening processes on smaller mammals and reptiles is less clear. The change in small mammal and reptile assemblages after the removal of rabbits, cats and foxes was studied over a 6‐year period in a landscape‐scale exclosure in the Australian arid zone. Rodents, particularly Notomys alexis and Pseudomys bolami, increased to 15 times higher inside the feral‐proof Arid Recovery Reserve compared with outside sites, where rabbits, cats and foxes were still present. Predation by cats was thought to exert the greatest influence on rodent numbers owing to the maintenance of the disparity in rodent responses through dry years and the differences in dietary preferences between rabbits and P. bolami. The presence of introduced Mus domesticus or medium‐sized re‐introduced mammal species did not significantly affect resident small mammal or reptile abundance. Abundance of most dasyurids and small lizards did not change significantly after the removal of feral animals although reductions in gecko populations inside the reserve may be attributable to second order trophic interactions or subtle changes in vegetation structure and cover. This study suggests that populations of rodent species in northern South Australia below the CWR may also be significantly affected by introduced cats, foxes and/or rabbits and that a taxa specific model of Australian mammal decline may be more accurate than one based on body weight.     

Characterisation of microsatellite loci in the subtidal habitat-forming alga, Phyllospora comosa (Phaeophyceae, Fucales)

Habitat-forming macroalgae play a central role in the ecology of temperate reefs worldwide but there exists a critical lack of knowledge about important processes such as dispersal and gene flow. Understanding dispersal and gene flow of habitat-forming seaweeds is particularly pertinent given that loss of habitat-forming algae is an increasingly prevalent problem worldwide. Here, we develop 10 microsatellite markers for the monotypic Phyllospora comosa, an important habitat-forming macroalga that has undergone massive declines on urbanised coastlines of Sydney, Australia. We characterise population genetic diversity and structure and estimate levels of dispersal and gene flow between the geographically isolated northern and southern populations in this subtidal macroalga.     

The zoogeography of algae-associated peracarids along the Pacific coast of Chile

Abstract Aim To describe the zoogeography of the algae‐associated peracarid crustaceans from exposed rocky shores along the SE‐Pacific. Location Chile, 18° S to 42° S. Methods A standardized sampling programme was used at all sites. Samples of macroalgae were taken at twenty sites distributed along the entire study area. Quantitative samples (n = 6 replicates of 8 cm^?2 surface area each) of calcareous and non‐calcareous red algae were taken in the low intertidal, preserved immediately in 4%‐formalin and washed over a 0.2‐mm mesh before sorting. All peracarid individuals were sorted, identified to the species level and then categorized in separate functional groups according to their feeding habits. Graphical representations of species replacement within each functional group along the latitudinal gradient are provided. A classification analysis employing the unweighted paired group method using arithmetic average (UPGMA) was conducted in order to reveal the main zoogeographical zones. Results A total of forty epifaunal peracarid species was found. A gradual replacement of species within different functional groups (grazing and suspension‐feeding species) was observed in the central region (c. 26° S?37° S). In this central region, species with northern and those with southern distribution overlapped, while other species were only found here, resulting in high species richness. The number of species/site/algal species in the northern (north of c. 25.5° S) and southern region (south of c. 38.5° S) was considerably lower than in the central region. The distribution of most grazing peracarids showed a more continuous pattern than that of suspension‐feeding amphipods. The distribution of the remaining species (predators, scavengers, deposit‐feeders, unknowns) was scattered along the examined sites. The cluster analysis for the epifaunal peracarid assemblage confirmed the separation of a northern and southern zone connected by a central (transitional) zone between c. 26° S and c. 37° S. Similar zonation patterns have been found by most other studies on the zoogeography of the Chilean coast, although little agreement exists about the exact limits of this transitional zone. It is discussed that the distribution limits of algae‐associated peracarids (and other macroinvertebrates) – particularly in the transitional zone – may show interannual variations as a result of varying oceanographic conditions. The large affinity of the algae‐associated peracarid fauna from the central and southern Chilean coast to those of other regions indicates that dispersal may be facilitated by rafting with floating algae transported in the Antarctic Circumpolar Current. Main conclusions The zoogeographical analysis of algae‐associated peracarids confirms the existence of a northern and a southern zone connected by an extensive transitional zone. General biology, habitat use and the abundant presence of dispersal vectors such as floating macroalgae may affect the zoogeography of species living in transitional zones with strong interannual variations in current regimes. In these areas, species associated with substrata of high dispersal potential may show different distribution patterns than species inhabiting other substrata.     

Rapid recovery of mammal fauna in the central Kimberley,northern Australia,following the removal of introduced herbivores

Australia has lost more native mammal species than any other country in the past two centuries, and this record of loss looks likely to worsen over the next few decades. Small‐ to medium‐sized mammals are declining in both distribution and density across large tracts of northern Australia's tropical savannas, including within protected areas. The most likely causes are a combination of changed fire patterns, the impacts of introduced herbivores and predation by feral cats. Here, in contrast to the prevailing trend across northern Australia, we report the recovery of native mammals in response to a large‐scale (>40 000 ha) destocking experiment carried out at Mornington Wildlife Sanctuary in the central Kimberley, north‐west Australia. Following the removal of introduced herbivores from 2004, the species richness and abundance of small native rodents and dasyurids increased significantly across all sampled habitats over the next 3 years. We discuss the implications of these results for guiding land management and applied research to help to reduce the impending risk of mammalian extinctions in northern Australia.     

Status of mammals on Groote Eylandt: Safe haven or slow burn?

Native mammals across northern Australia have suffered severe decline, with feral cats (Felis catus), introduced herbivores and changed fire regimes being implicated as drivers. However, uncertainty surrounding the relative contribution of each of these threats, and the interactions between them, is limiting the development of effective management strategies. The absence of introduced herbivores and cane toads (Rhinella marina) on Groote Eylandt, Northern Territory, provides an opportunity to evaluate some hypothesised threats in isolation of others. We used camera traps to investigate the correlates of native mammal distribution and abundance at 112 lowland savanna sites across Groote Eylandt. Two large grids of camera traps were also deployed to obtain estimates of feral cat density. We hypothesised that native mammal populations would be negatively associated with feral cat occupancy as well as frequent, large fires. Native mammal site‐occupancy on Groote Eylandt was generally higher compared to mainland Northern Territory. Feral cats were infrequently detected, precluding both an estimate of feral cat density and an evaluation of the relationship between feral cats and native mammals. We found no evidence that native mammal site‐occupancy or relative abundance is negatively associated with frequent, large fires. The relatively healthy state of native mammal populations on Groote Eylandt is likely due to the low density of feral cats, the benign fire regime and the absence of large introduced herbivores and cane toads. However, due to a lack of historical data, the current state of mammals should not be taken as evidence that these populations are safe from decline. This study highlights that the apparent resilience of mammal populations is a result of complex interactions between factors that vary substantially across the landscape. Caution is therefore required when making broad inferences about the drivers of mammal decline from studies that are spatially and temporally limited.     

Genetic and historical evidence of common sawsharks Pristiophorus cirratus in the waters of southern Queensland

In 2011, a male pristiophorid was caught by a prawn trawler north east of Cape Moreton, Queensland, Australia. Molecular analyses confirmed the specimen to be the common sawshark Pristiophorus cirratus. Historical catch data indicate the occurrence of the species in the region but this is the first verified record of P. cirratus occurring in the waters of southern Queensland. Together, these records extend the recognised northern limit of P. cirratus by c. 500 km, which suggests that further investigation of its distribution is warranted.     

Revision of the bathyal fish genusHomostolus (Ophidiiformes,Ophidiidae)

The ophidiid fish genusHomostolus is revised on the basis of 44 specimens. Meristic and morphometric characters strongly indicate that the genus as presently known contains a single species,Homostolus acer Smith et Radcliffe, 1913, withHomostolus japonicus Matsubara, 1943, reduced to synonymy. Geographical variations found in certain meristic characters indicate thatH. acer expanded its range from Philippine waters into both northern and southern waters. The species is distributed on deep-sea floors from the Pacific Ocean off central Japan, to the Indian Ocean off northern Western Australia, and to the Tasman Sea off New South Wales, at bathyal depths from about 400 to 700 m.     

Morphological and Body Color Variation in Thai <Emphasis Type="Italic">Macaca fascicularis fascicularis</Emphasis> North and South of the Isthmus of Kra

Long-tailed macaques (Macaca fascicularis fascicularis) are widely distributed in Southeast Asia and are morphologically and genetically (Tosi et al. in International Journal of Primatology 23:161–178, 2002) distinguishable on either side of the Isthmus of Kra (ca. 10.5°N). We compared the somatometry and body color of 15 local populations of long-tailed macaques in Thailand distributed over areas from 6.5°N to 16.3°N and also a Thai rhesus macaque population at 17.2°N. Limb proportions and body color variation follow the geographical trend. However, contrary to a previous report, body size does not decrease with latitude in the northern group and also in the southern (southerly distributed) rhesus macaque. Relative tail length (RTL) and color contrast in yellow between the back and thigh are the sole traits that distinctively separate the 2 groups: the southern group has a long relative tail length (RTL >125%) and small color contrast, whereas the northern group has a short RTL (<120%) and large color contrast. The southern rhesus macaques appear to have somatometric and body color traits that follow the geographical trend in long-tailed macaques, though they maintain their distinctive species-specific traits of shorter RTL (ca. 55%), shorter relative facial length, and a bipartite body color pattern. Researchers assume that the northern group of long-tailed macaques and the southern rhesus macaques had undergone partial introgression with each other. Montane refugia present during the glacial period are localities in which introgression occurred in long-tailed macaques.     

Presence of the amphibian chytrid fungus Batrachochytrium dendrobatidis in threatened corroboree frog populations in the Australian Alps

Since the early 1980s, the southern corroboree frog Pseudophryne corroboree and northern corroboree frog P. pengilleyi have been in a state of decline from their sub-alpine and high montane bog environments on the southern tablelands of New South Wales, Australia. To date, there has been no adequate explanation as to what is causing the decline of these species. We investigated the possibility that a pathogen associated with other recent frog declines in Australia, the amphibian chytrid fungus Batrachochytrium dendrobatidis, may have been implicated in the decline of the corroboree frogs. We used histology of toe material and real-time PCR of skin swabs to investigate the presence and infection rates with B. dendrobatidis in historic and extant populations of both corroboree frog species. Using histology, we did not detect any B. dendrobatidis infections in corroboree frog populations prior to their decline. However, using the same technique, high rates of infection were observed in populations of both species after the onset of substantial population declines. The real-time PCR screening of skin swabs identified high overall infection rates in extant populations of P. corroboree (between 44 and 59%), while significantly lower rates of infection were observed in low-altitude P. pengilleyi populations (14%). These results suggest that the initial and continued decline of the corroboree frogs may well be attributed to the emergence of B. dendrobatidis in populations of these species.