Microbial control of soil organic matter mineralization responses to labile carbon in subarctic climate change treatments

Half the global soil carbon (C) is held in high‐latitude systems. Climate change will expose these to warming and a shift towards plant communities with more labile C input. Labile C can also increase the rate of loss of native soil organic matter (SOM); a phenomenon termed ‘priming’. We investigated how warming (+1.1 °C over ambient using open top chambers) and litter addition (90 g m^?2 yr^?1) treatments in the subarctic influenced the susceptibility of SOM mineralization to priming, and its microbial underpinnings. Labile C appeared to inhibit the mineralization of C from SOM by up to 60% within hours. In contrast, the mineralization of N from SOM was stimulated by up to 300%. These responses occurred rapidly and were unrelated to microbial successional dynamics, suggesting catabolic responses. Considered separately, the labile C inhibited C mineralization is compatible with previously reported findings termed ‘preferential substrate utilization’ or ‘negative apparent priming’, while the stimulated N mineralization responses echo recent reports of ‘real priming’ of SOM mineralization. However, C and N mineralization responses derived from the same SOM source must be interpreted together: This suggested that the microbial SOM‐use decreased in magnitude and shifted to components richer in N. This finding highlights that only considering SOM in terms of C may be simplistic, and will not capture all changes in SOM decomposition. The selective mining for N increased in climate change treatments with higher fungal dominance. In conclusion, labile C appeared to trigger catabolic responses of the resident microbial community that shifted the SOM mining to N‐rich components; an effect that increased with higher fungal dominance. Extrapolating from these findings, the predicted shrub expansion in the subarctic could result in an altered microbial use of SOM, selectively mining it for N‐rich components, and leading to a reduced total SOM‐use.     

Priming effect and microbial diversity in ecosystem functioning and response to global change: a modeling approach using the SYMPHONY model

Integration of the priming effect (PE) in ecosystem models is crucial to better predict the consequences of global change on ecosystem carbon (C) dynamics and its feedbacks on climate. Over the last decade, many attempts have been made to model PE in soil. However, PE has not yet been incorporated into any ecosystem models. Here, we build plant/soil models to explore how PE and microbial diversity influence soil/plant interactions and ecosystem C and nitrogen (N) dynamics in response to global change (elevated CO₂ and atmospheric N depositions). Our results show that plant persistence, soil organic matter (SOM) accumulation, and low N leaching in undisturbed ecosystems relies on a fine adjustment of microbial N mineralization to plant N uptake. This adjustment can be modeled in the SYMPHONY model by considering the destruction of SOM through PE, and the interactions between two microbial functional groups: SOM decomposers and SOM builders. After estimation of parameters, SYMPHONY provided realistic predictions on forage production, soil C storage and N leaching for a permanent grassland. Consistent with recent observations, SYMPHONY predicted a CO₂‐induced modification of soil microbial communities leading to an intensification of SOM mineralization and a decrease in the soil C stock. SYMPHONY also indicated that atmospheric N deposition may promote SOM accumulation via changes in the structure and metabolic activities of microbial communities. Collectively, these results suggest that the PE and functional role of microbial diversity may be incorporated in ecosystem models with a few additional parameters, improving accuracy of predictions.     

Soil‐specific response functions of organic matter mineralization to the availability of labile carbon

Soil organic matter (SOM) mineralization processes are central to the functioning of soils in relation to feedbacks with atmospheric CO₂ concentration, to sustainable nutrient supply, to structural stability and in supporting biodiversity. Recognition that labile C‐inputs to soil (e.g. plant‐derived) can significantly affect mineralization of SOM (‘priming effects’) complicates prediction of environmental and land‐use change effects on SOM dynamics and soil C‐balance. The aim of this study is to construct response functions for SOM priming to labile C (glucose) addition rates, for four contrasting soils. Six rates of glucose (3 atm% ¹³C) addition (in the range 0–1 mg glucose g^?1 soil day^?1) were applied for 8 days. Soil CO₂ efflux was partitioned into SOM‐ and glucose‐derived components by isotopic mass balance, allowing quantification of SOM priming over time for each soil type. Priming effects resulting from pool substitution effects in the microbial biomass (‘apparent priming’) were accounted for by determining treatment effects on microbial biomass size and isotopic composition. In general, SOM priming increased with glucose addition rate, approaching maximum rates specific for each soil (up to 200%). Where glucose additions saturated microbial utilization capacity (>0.5 mg glucose g^?1 soil), priming was a soil‐specific function of glucose mineralization rate. At low to intermediate glucose addition rates, the magnitude (and direction) of priming effects was more variable. These results are consistent with the view that SOM priming is supported by the availability of labile C, that priming is not a ubiquitous function of all components of microbial communities and that soils differ in the extent to which labile C stimulates priming. That priming effects can be represented as response functions to labile C addition rates may be a means of their explicit representation in soil C‐models. However, these response functions are soil‐specific and may be affected by several interacting factors at lower addition rates.     

Roots and fungi accelerate carbon and nitrogen cycling in forests exposed to elevated CO2

A common finding in multiple CO(2) enrichment experiments in forests is the lack of soil carbon (C) accumulation owing to microbial priming of 'old' soil organic matter (SOM). However, soil C losses may also result from the accelerated turnover of 'young' microbial tissues that are rich in nitrogen (N) relative to bulk SOM. We measured root-induced changes in soil C dynamics in a pine forest exposed to elevated CO(2) and N enrichment by combining stable isotope analyses, molecular characterisations of SOM and microbial assays. We find strong evidence that the accelerated turnover of root-derived C under elevated CO(2) is sufficient in magnitude to offset increased belowground inputs. In addition, the C losses were associated with accelerated N cycling, suggesting that trees exposed to elevated CO(2) not only enhance N availability by stimulating microbial decomposition of SOM via priming but also increase the rate at which N cycles through microbial pools.     

Altered patterns of soil carbon substrate usage and heterotrophic respiration in a pine forest with elevated CO2 and N fertilization

To assess how heterotrophic microorganisms may alter their activities and thus their CO₂‐C return to the atmosphere with elevated CO₂ and changing N availability, we examined soil organic matter (SOM) dynamics at the Duke Free Air Carbon Enrichment (FACE) site, after N fertilizer was applied. We measured heterotrophic respiration during early and late stages of SOM mineralization in soil incubations to capture activity on relatively labile and refractory SOM pools. We also measured δ¹³C of respired CO₂‐C and phospholipid fatty acids (PLFAs) during early mineralization stages to track the microbial groups involved in substrate use. We calculated , a measure of δ¹³C_PLFA normalized by respired δ¹³CO₂, to assess microbial function with C substrates formed with elevated CO₂ and altered N availability, via the distinct δ¹³C of the supplemental CO₂. We also quantified extracellular enzyme activity (EEA) during labile and recalcitrant SOM mineralization. Early in the incubations, increased N availability reduced heterotrophic CO₂‐C release. By the later stages of SOM mineralization, elevated CO₂ soils with fertilization had respired 72% of the CO₂‐C respired by all other soils. values suggest that fungi in elevated CO₂ plots took up C substrates possessing the δ¹³C signature of recently formed SOM, and added N promoted the activity of Gram‐negative bacteria and reduced that of Gram‐positive bacteria, particularly actinomycetes. Consistent with this, the enzyme responsible for the degradation of peptidoglycan and chitin, compounds produced by Gram‐positive bacteria and fungi, respectively, experienced a decline in activity with N fertilization. If patterns observed in this study with N additions are reversed with progressive N limitation at this site, actinomycetes and other Gram‐positive bacteria responsible for mineralizing relatively recalcitrant substrates may experience increases in their activity. Such shifts in microbial functioning may result in increased turnover of, and C release from, relatively decay‐resistant material.     

Rhizosphere processes are quantitatively important components of terrestrial carbon and nutrient cycles

While there is an emerging view that roots and their associated microbes actively alter resource availability and soil organic matter (SOM) decomposition, the ecosystem consequences of such rhizosphere effects have rarely been quantified. Using a meta‐analysis, we show that multiple indices of microbially mediated C and nitrogen (N) cycling, including SOM decomposition, are significantly enhanced in the rhizospheres of diverse vegetation types. Then, using a numerical model that combines rhizosphere effect sizes with fine root morphology and depth distributions, we show that root‐accelerated mineralization and priming can account for up to one‐third of the total C and N mineralized in temperate forest soils. Finally, using a stoichiometrically constrained microbial decomposition model, we show that these effects can be induced by relatively modest fluxes of root‐derived C, on the order of 4% and 6% of gross and net primary production, respectively. Collectively, our results indicate that rhizosphere processes are a widespread, quantitatively important driver of SOM decomposition and nutrient release at the ecosystem scale, with potential consequences for global C stocks and vegetation feedbacks to climate.     

Annual burning of a tallgrass prairie inhibits C and N cycling in soil,increasing recalcitrant pyrogenic organic matter storage while reducing N availability

Grassland ecosystems store an estimated 30% of the world's total soil C and are frequently disturbed by wildfires or fire management. Aboveground litter decomposition is one of the main processes that form soil organic matter (SOM). However, during a fire biomass is removed or partially combusted and litter inputs to the soil are substituted with inputs of pyrogenic organic matter (py‐OM). Py‐OM accounts for a more recalcitrant plant input to SOM than fresh litter, and the historical frequency of burning may alter C and N retention of both fresh litter and py‐OM inputs to the soil. We compared the fate of these two forms of plant material by incubating ¹³C‐ and ¹⁵N‐labeled Andropogon gerardii litter and py‐OM at both an annually burned and an infrequently burned tallgrass prairie site for 11 months. We traced litter and py‐OM C and N into uncomplexed and organo‐mineral SOM fractions and CO₂ fluxes and determined how fire history affects the fate of these two forms of aboveground biomass. Evidence from CO₂ fluxes and SOM C:N ratios indicates that the litter was microbially transformed during decomposition while, besides an initial labile fraction, py‐OM added to SOM largely untransformed by soil microbes. Additionally, at the N‐limited annually burned site, litter N was tightly conserved. Together, these results demonstrate how, although py‐OM may contribute to C and N sequestration in the soil due to its resistance to microbial degradation, a long history of annual removal of fresh litter and input of py‐OM infers N limitation due to the inhibition of microbial decomposition of aboveground plant inputs to the soil. These results provide new insight into how fire may impact plant inputs to the soil, and the effects of py‐OM on SOM formation and ecosystem C and N cycling.     

Design and test of a generic cohort model of soil organic matter decomposition: the SOMKO model

• 1 SOMKO is a new simulation model of soil organic matter (SOM) dynamics aimed at predicting long‐term and short‐term SOM dynamics based on a mechanistic approach focusing on microbes as the key agents of decomposition.
• 2 SOM is partitioned into cohorts and chemical quality pools (classified by age and chemical composition), the microbial community processes are explicitly represented, and the C : N stoichiometric constraints are accounted for through a new mechanism of offer and demand.
• 3 The analysis of model equations shows that: (1) SOM C : N cannot decrease below microbial C : N; and (2) the nitrogen limitation of decomposition depends on SOM C : N, microbial biomass and soil mineral nitrogen. First tests of the model show good qualitative behaviour for simulating the dynamics of short‐term litter‐bag type decomposition, long‐term SOM increase, pulsed mineral nitrogen production, the priming effect due to easily decomposable carbon addition, and the effects of vegetation clearance and climate change on SOM. Simulations are in good agreement with long‐term experimental data.
• 4 SOMKO is an integrated component of the coupled soil–vegetation models within the ETEMA (European Terrestrial Ecosystem Modelling Activity) framework. Future extensions of this work include: (1) estimating microbial parameters from specific experiments; (2) spatial distribution of SOMKO in multistrata models; and (3) implementing nitrification/denitrification processes, phosphorus limitation and microfaunal activity.

     

5300-Year-old soil carbon is less primed than young soil organic matter

Soils harbor more than three times as much carbon (C) as the atmosphere, a large fraction of which (stable organic matter) serves as the most important global C reservoir due to its long residence time. Litter and root inputs bring fresh organic matter (FOM) into the soil and accelerate the turnover of stable C pools, and this phenomenon is termed the “priming effect” (PE). Compared with knowledge about labile soil C pools, very little is known about the vulnerability of stable C to priming. Using two soils that substantially differed in age (500 and 5300 years before present) and in the degree of chemical recalcitrance and physical protection of soil organic matter (SOM), we showed that leaf litter amendment primed 264% more organic C from the young SOM than from the old soil with very stable C. Hierarchical partitioning analysis confirmed that SOM stability, reflected mainly by available C and aggregate protection of SOM, is the most important predictor of leaf litter-induced PE. The addition of complex FOM (i.e., leaf litter) caused a higher bacterial oligotroph/copiotroph (K-/r-strategists) ratio, leading to a PE that was 583% and 126% greater than when simple FOM (i.e., glucose) was added to the young and old soils, respectively. This implies that the PE intensity depends on the chemical similarity between the primer (here FOM) and SOM. Nitrogen (N) mining existed when N and simple FOM were added (i.e., Glucose+N), and N addition raised the leaf litter-induced PE in the old soil that had low N availability, which was well explained by the microbial stoichiometry. In conclusion, the PE induced by FOM inputs strongly decreases with increasing SOM stability. However, the contribution of stable SOM to CO₂ efflux cannot be disregarded due to its huge pool size.     

Feedbacks between plant N demand and rhizosphere priming depend on type of mycorrhizal association

Ecosystem carbon (C) balance is hypothesised to be sensitive to the mycorrhizal strategies that plants use to acquire nutrients. To test this idea, we coupled an optimality‐based plant nitrogen (N) acquisition model with a microbe‐focused soil organic matter (SOM) model. The model accurately predicted rhizosphere processes and C–N dynamics across a gradient of stands varying in their relative abundance of arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) trees. When mycorrhizal dominance was switched – ECM trees dominating plots previously occupied by AM trees, and vice versa – legacy effects were apparent, with consequences for both C and N stocks in soil. Under elevated productivity, ECM trees enhanced decomposition more than AM trees via microbial priming of unprotected SOM. Collectively, our results show that ecosystem responses to global change may hinge on the balance between rhizosphere priming and SOM protection, and highlight the importance of dynamically linking plants and microbes in terrestrial biosphere models.     

Short-term carbon input increases microbial nitrogen demand,but not microbial nitrogen mining,in a set of boreal forest soils

Rising carbon dioxide (CO₂) concentrations and temperatures are expected to stimulate plant productivity and ecosystem C sequestration, but these effects require a concurrent increase in N availability for plants. Plants might indirectly promote N availability as they release organic C into the soil (e.g., by root exudation) that can increase microbial soil organic matter (SOM) decomposition (“priming effect”), and possibly the enzymatic breakdown of N-rich polymers, such as proteins, into bio-available units (“N mining”). We tested the adjustment of protein depolymerization to changing soil C and N availability in a laboratory experiment. We added easily available C or N sources to six boreal forest soils, and determined soil organic C mineralization, gross protein depolymerization and gross ammonification rates (using ¹⁵N pool dilution assays), and potential extracellular enzyme activities after 1 week of incubation. Added C sources were ¹³C-labelled to distinguish substrate from soil derived C mineralization. Observed effects reflect short-term adaptations of non-symbiotic soil microorganisms to increased C or N availability. Although C input promoted microbial growth and N demand, we did not find indicators of increased N mobilization from SOM polymers, given that none of the soils showed a significant increase in protein depolymerization, and only one soil showed a significant increase in N-targeting enzymes. Instead, our findings suggest that microorganisms immobilized the already available N more efficiently, as indicated by decreased ammonification and inorganic N concentrations. Likewise, although N input stimulated ammonification, we found no significant effect on protein depolymerization. Although our findings do not rule out in general that higher plant-soil C allocation can promote microbial N mining, they suggest that such an effect can be counteracted, at least in the short term, by increased microbial N immobilization, further aggravating plant N limitation.     

Evidence of a strong coupling between root exudation, C and N availability, and stimulated SOM decomposition caused by rhizosphere priming effects

Increased temperatures and concomitant changes in vegetation patterns are expected to dramatically alter the functioning of northern ecosystems over the next few decades. Predicting the ecosystem response to such a shift in climate and vegetation is complicated by the lack of knowledge about the links between aboveground biota and belowground process rates. Current models suggest that increasing temperatures and rising concentrations of atmospheric CO(2) will be partly mitigated by elevated C sequestration in plant biomass and soil. However, empirical evidence does not always support this assumption, as elevated temperature and CO(2) concentrations also accelerate the belowground C flux, in many cases extending to increased decomposition of soil organic matter (SOM) and ultimately resulting in decreased soil C stocks. The mechanism behind the increase has remained largely unknown, but it has been suggested that priming might be the causative agent. Here, we provide quantitative evidence of a strong coupling between root exudation, SOM decomposition, and release of plant available N caused by rhizosphere priming effects. As plants tend to increase belowground C allocation with increased temperatures and CO(2) concentrations, priming effects need to be considered in our long-term analysis of soil C budgets in a changing environment. The extent of priming seems to be intimately linked to resource availability, as shifts in the stoichiometric nutrient demands of plants and microorganisms will lead to either cooperation (resulting in priming) or competition (no priming will occur). The findings lead us on the way to resolve the varying response of primary production, SOM decomposition, and release of plant available N to elevated temperatures, CO(2) concentrations, and N availability.     

The influence of plants grown under elevated CO2 and N fertilization on soil nitrogen dynamics

We investigated the effects of spring barley growth on nitrogen (N) transformations and rhizosphere microbial processes in a controlled system under elevated carbon dioxide (CO₂) at two levels of N fertilization (applied with ¹⁵N labelling). After 25 d, elevated CO₂ (twice ambient) increased plant growth (dry weight, DW) by 141% at low‐N fertilization and by 60% at high‐N fertilization, but its positive effect on the root‐to‐shoot ratio was only significant at low‐N input. As a result of this plant response, elevated CO₂ caused a greater soil CO₂ efflux, rhizosphere soil DW, and soil microbial biomass under N‐limiting conditions than under high N availability. Elevated CO₂ also caused a significant (P < 0.001) increase in the N recovered by the plant from both the labelled (N_f) and unlabelled (N_s + N_uf) N pools. The dynamics of N in the system as affected by elevated CO₂ were driven principally by mineralization–immobilization turnover, with little loss by denitrification. Under N‐limiting conditions, there is evidence to suggest enhanced nutrient release from soil organic matter (SOM) pools—a process which could be defined as priming. The results of our experiment did not indicate a direct plant‐mediated effect of elevated CO₂ on nitrous oxide (N₂O) fluxes or denitrification activity.     

Soil carbon storage under simulated climate change is mediated by plant functional type

The stability of soil organic matter (SOM) pools exposed to elevated CO₂ and warming has not been evaluated adequately in long‐term experiments and represents a substantial source of uncertainty in predicting ecosystem feedbacks to climate change. We conducted a 6‐year experiment combining free‐air CO₂ enrichment (FACE, 550 ppm) and warming (+2 °C) to evaluate changes in SOM accumulation in native Australian grassland. In this system, competitive interactions appear to favor C₄ over C₃ species under FACE and warming. We therefore investigated the role of plant functional type (FT) on biomass and SOM responses to the long‐term treatments by carefully sampling soil under patches of C₃‐ and C₄‐dominated vegetation. We used physical fractionation to quantify particulate organic matter (POM) and long‐term incubation to assess potential decomposition rates. Aboveground production of C₄ grasses increased in response to FACE, but total root biomass declined. Across treatments, C : N ratios were higher in leaves, roots and POM of C₄ vegetation. CO₂ and temperature treatments interacted with FT to influence SOM, and especially POM, such that soil carbon was increased by warming under C₄ vegetation, but not in combination with elevated CO₂. Potential decomposition rates increased in response to FACE and decreased with warming, possibly owing to treatment effects on soil moisture and microbial community composition. Decomposition was also inversely correlated with root N concentration, suggesting increased microbial demand for older, N‐rich SOM in treatments with low root N inputs. This research suggests that C₃–C₄ vegetation responses to future climate conditions will strongly influence SOM storage in temperate grasslands.     

Effects of simulated exudate C:N stoichiometry on dynamics of carbon and microbial community composition in a subalpine coniferous forest of western Sichuan,China

 目前有关森林根系分泌物及其诱导的土壤生态学效应研究主要关注根系碳(C)源输入, 而极少关注根系分泌物氮(N)源输入及其伴随的C:N化学计量特征对土壤过程和功能的影响, 极大地限制了我们对森林根系-土壤-微生物互作机制的深入认识。该研究以川西亚高山天然林和云杉(Picea asperata)人工林土壤为对象, 模拟配制不同C:N化学计量特征(只有N、C:N = 10、C:N = 50、C:N = 100和只有C处理)的根系分泌物溶液进行人工添加试验, 以探究根系分泌物化学计量特征对两种林分土壤碳动态及其微生物群落结构的影响差异。结果表明: 模拟根系分泌物C添加总体促进了两种林分土壤有机质分解激发效应而降低了土壤总碳(TC)含量, 而N添加在一定程度上缓和了两种林分土壤TC含量的降低幅度, 且C添加导致天然林土壤TC含量的降低幅度明显低于土壤N有效性更低的人工林。几种根系分泌物添加处理对两种林分土壤活性和惰性碳库的影响无明显规律。另外, 根系分泌物C添加总体降低了天然林土壤微生物总磷脂脂肪酸(PLFA)含量和细菌、放线菌、真菌PLFA含量, 而总体增加人工林土壤微生物PLFA总量和细菌、放线菌、真菌PLFA含量, 并诱导两种林分土壤微生物群落结构(细菌:真菌相对丰度)也发生了各自不同的变化。上述结果表明森林根系分泌物N源输入和土壤N有效性共同调控根系C源输入对土壤有机质分解激发效应的方向和幅度。研究结果为深入揭示典型森林根系分泌物化学计量特征对土壤生物化学循环过程的调控机制提供了一定的理论依据。     

Biochar amendment to soils with contrasting organic matter level: effects on N mineralization and biological soil properties

Four biochar types, produced by slow pyrolysis of poultry litter (PL) and pine chips (P) at 400 or 500 °C, were added to two adjacent soils with contrasting soil organic matter (SOM) content (8.9 vs. 16.1 g C kg^?1). The N mineralization rate was determined during 14‐week incubations and assessments were made of the microbial biomass C, dehydrogenase activity, and the microbial community structure (PLFA‐extraction). The addition of PL biochars increased the net N mineralization (i.e., compared to the control treatment) in both soils, while for treatments with P biochars net N immobilization was observed in both soils. Increasing the pyrolysis temperature of both feedstock types led to a decrease in net N mineralization. The ratio of Bacterial to Fungal PLFA biomarkers also increased with addition of biochars, and particularly in the case of the 500 °C biochars. Next to feedstock type and pyrolysis temperature, SOM content clearly affected the assessed soil biological parameters, viz. net N mineralization or immobilization, MBC and dehydrogenase activity were all greater in the H soil. This might be explained by an increased chance of physical contact between the microbial community activated by SOM mineralization upon incubation and discrete biochar particles. However, when considering the H soil's double C and N content, these responses were disproportionally small, which may be partly due to the L soil's, somewhat more labile SOM. Nonetheless, increasing SOM content and microbial biomass and activity generally appears to result in greater mineralization of biochar. Additionally, higher N mineralization after PL addition to the H soil with lower pH than the L soil can be due to the liming effect of the PL biochars.     

Effects of forest degradation on microbial communities and soil carbon cycling: A global meta‐analysis

Aim

The aim was to explore how conversions of primary or secondary forests to plantations or agricultural systems influence soil microbial communities and soil carbon (C) cycling.

Location

Global.

Time period

1993–2017.

Major taxa studied

Soil microbes.

Methods

A meta‐analysis was conducted to examine effects of forest degradation on soil properties and microbial attributes related to microbial biomass, activity, community composition and diversity based on 408 cases from 119 studies in the world.

Results

Forest degradation decreased the ratios of K‐strategists to r‐strategists (i.e., ratios of fungi to bacteria, Acidobacteria to Proteobacteria, Actinobacteria to Bacteroidetes and Acidobacteria + Actinobacteria to Proteobacteria + Bacteroidetes). The response ratios (RRs) of the K‐strategist to r‐strategist ratios to forest degradation decreased and increased with increased RRs of soil pH and soil C to nitrogen ratio (C:N), respectively. Forest degradation increased the bacterial alpha‐diversity indexes, of which the RRs increased and decreased as the RRs of soil pH and soil C:N increased, respectively. The overall RRs across all the forest degradation types ranked as microbial C (?40.4%) > soil C (?33.3%) > microbial respiration (?18.9%) > microbial C to soil C ratio (qMBC; ?15.9%), leading to the RRs of microbial respiration rate per unit microbial C (qCO₂) and soil C decomposition rate (respiration rate per unit soil C), on average, increasing by +43.2 and +25.0%, respectively. Variances of the RRs of qMBC and qCO₂ were significantly explained by the soil C, soil C:N and mean annual precipitation.

Main conclusions

Forest degradation consistently shifted soil microbial community compositions from K‐strategist dominated to r‐strategist dominated, altered soil properties and stimulated microbial activity and soil C decomposition. These results are important for modelling the soil C cycling under projected global land‐use changes and provide supportive evidence for applying the macroecology theory on ecosystem succession and disturbance in soil microbial ecology.     

Biochar stability in soil: meta‐analysis of decomposition and priming effects

The stability and decomposition of biochar are fundamental to understand its persistence in soil, its contribution to carbon (C) sequestration, and thus its role in the global C cycle. Our current knowledge about the degradability of biochar, however, is limited. Using 128 observations of biochar‐derived CO₂ from 24 studies with stable (¹³C) and radioactive (¹⁴C) carbon isotopes, we meta‐analyzed the biochar decomposition in soil and estimated its mean residence time (MRT). The decomposed amount of biochar increased logarithmically with experimental duration, and the decomposition rate decreased with time. The biochar decomposition rate varied significantly with experimental duration, feedstock, pyrolysis temperature, and soil clay content. The MRTs of labile and recalcitrant biochar C pools were estimated to be about 108 days and 556 years with pool sizes of 3% and 97%, respectively. These results show that only a small part of biochar is bioavailable and that the remaining 97% contribute directly to long‐term C sequestration in soil. The second database (116 observations from 21 studies) was used to evaluate the priming effects after biochar addition. Biochar slightly retarded the mineralization of soil organic matter (SOM; overall mean: ?3.8%, 95% CI = ?8.1–0.8%) compared to the soil without biochar addition. Significant negative priming was common for studies with a duration shorter than half a year (?8.6%), crop‐derived biochar (?20.3%), fast pyrolysis (?18.9%), the lowest pyrolysis temperature (?18.5%), and small application amounts (?11.9%). In contrast, biochar addition to sandy soils strongly stimulated SOM mineralization by 20.8%. This indicates that biochar stimulates microbial activities especially in soils with low fertility. Furthermore, abiotic and biotic processes, as well as the characteristics of biochar and soils, affecting biochar decomposition are discussed. We conclude that biochar can persist in soils on a centennial scale and that it has a positive effect on SOM dynamics and thus on C sequestration.     

The Microbial Efficiency‐Matrix Stabilization (MEMS) framework integrates plant litter decomposition with soil organic matter stabilization: do labile plant inputs form stable soil organic matter?

The decomposition and transformation of above‐ and below‐ground plant detritus (litter) is the main process by which soil organic matter (SOM) is formed. Yet, research on litter decay and SOM formation has been largely uncoupled, failing to provide an effective nexus between these two fundamental processes for carbon (C) and nitrogen (N) cycling and storage. We present the current understanding of the importance of microbial substrate use efficiency and C and N allocation in controlling the proportion of plant‐derived C and N that is incorporated into SOM, and of soil matrix interactions in controlling SOM stabilization. We synthesize this understanding into the Microbial Efficiency‐Matrix Stabilization (MEMS) framework. This framework leads to the hypothesis that labile plant constituents are the dominant source of microbial products, relative to input rates, because they are utilized more efficiently by microbes. These microbial products of decomposition would thus become the main precursors of stable SOM by promoting aggregation and through strong chemical bonding to the mineral soil matrix.     

Microbial mechanisms of carbon priming effects revealed during the interaction of crop residue and nutrient inputs in contrasting soils

Agronomic practices such as crop residue return and additional nutrient supply are recommended to increase soil organic carbon (SOC) in arable farmlands. However, changes in the priming effect (PE) on native SOC mineralization in response to integrated inputs of residue and nutrients are not fully known. This knowledge gap along with a lack of understanding of microbial mechanisms hinders the ability to constrain models and to reduce the uncertainty to predict carbon (C) sequestration potential. Using a ¹³C‐labeled wheat residue, this 126‐day incubation study examined the dominant microbial mechanisms that underpin the PE response to inputs of wheat residue and nutrients (nitrogen, phosphorus and sulfur) in two contrasting soils. The residue input caused positive PE through “co‐metabolism,” supported by increased microbial biomass, C and nitrogen (N) extracellular enzyme activities (EEAs), and gene abundance of certain microbial taxa (Eubacteria, β‐Proteobacteria, Acidobacteria, and Fungi). The residue input could have induced nutrient limitation, causing an increase in the PE via “microbial nutrient mining” of native soil organic matter, as suggested by the low C‐to‐nutrient stoichiometry of EEAs. At the high residue, exogenous nutrient supply (cf. no‐nutrient) initially decreased positive PE by alleviating nutrient mining, which was supported by the low gene abundance of Eubacteria and Fungi. However, after an initial decrease in PE at the high residue with nutrients, the PE increased to the same magnitude as without nutrients over time. This suggests the dominance of “microbial stoichiometry decomposition,” supported by higher microbial biomass and EEAs, while Eubacteria and Fungi increased over time, at the high residue with nutrients cf. no‐nutrient in both soils. Our study provides novel evidence that different microbial mechanisms operate simultaneously depending on organic C and nutrient availability in a residue‐amended soil. Our results have consequences for SOC modeling and integrated nutrient management employed to increase SOC in arable farmlands.