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1.
Michael P. Hammer Laura Taillebois Alison J. King David A. Crook Dion Wedd Mark Adams Peter J. Unmack Doug F. Hoese Terry Bertozzi 《Journal of fish biology》2021,99(1):87-100
Flathead gobies (genus Glossogobius) include c. 40 small- to medium-sized benthic fishes found primarily in freshwater habitats across the Indo-Pacific, having biodiversity value as well as cultural and economic value as food fishes, especially in developing countries. To help resolve considerable confusion regarding the identification of some of the larger-growing Glossogobius species, a systematic framework was established using nuclear genetic markers, mitochondrial DNA barcoding and phenotypic evidence for a geographically widespread collection of individuals from the waterways of tropical northern Australia. Species boundaries and distribution patterns were discordant with those previously reported, most notably for the tank goby Glossogobius giuris, which included a cryptic species. Genetic divergence was matched with accompanying unique visual characters that aid field identification. Additional taxonomic complexity was also evident, by comparison with DNA barcodes from international locations, suggesting that the specific names applicable for two of the candidate species in Australia remain unresolved due to confusion surrounding type specimens. Although flathead gobies are assumed to be widespread and common, this study demonstrates that unrealised taxonomic and ecological complexity is evident, and this will influence assessments of tropical biodiversity and species conservation. This study supports the need for taxonomic studies of freshwater fishes to underpin management in areas subject to significant environmental change. 相似文献
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Aim To analyse the geographical patterns in the composition and diversity of otter's (Lutra lutra L.) diet and their relationship with climatic characteristics. Location European freshwater habitats under Mediterranean and temperate climatic regimes. Methods Thirty‐seven otter diet studies were reviewed, twenty‐one from temperate and sixteen from Mediterranean areas. All studies were based on spraint analysis and their results expressed as relative frequency of occurrence of seven main prey categories. Principal Component Analysis was performed to extract the main gradients of diet composition. Pearson's correlation and t‐tests were used to assess the relationship between diet characteristics (composition, diversity and taxonomic richness) and geographical and climatic variables. Results A clear latitudinal gradient in diet composition was observed. Otter diet was more diverse and featured more prey classes in southern localities, while the species was more piscivorous towards the north, where it predated upon a higher number of fish families. This pattern was similar when temperate and Mediterranean localities of Europe were compared. Mediterranean otters behaved as more generalist predators than temperate ones, relying less on fish, and more on aquatic invertebrates and reptiles. Main conclusions Geographical differences in otter feeding ecology in Europe seem to be related with the two contrasted climatic conditions affecting prey populations. The otter can act as a highly specialized piscivorous predator in temperate freshwater ecosystems, which do not suffer a dry season and have a comparatively stable water regime compared to Mediterranean ones. However, the unpredictable prey availability in Mediterranean areas, affected by strong spatial and temporal water shortages, favours a diversification of the otter's diet. 相似文献
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The Mediterranean freshwater fish fauna has evolved under constraints imposed by the seasonal weather/hydrological patterns that define the Mediterranean climate. These conditions have influenced the genetic and demographic structure of aquatic communities since their origins in the Mid‐Pliocene. Freshwater species in Mediterranean‐type climates will likely constitute genetically well‐differentiated populations, to varying extents depending on basin size, as a consequence of fragmentation resulting from drought/flood cycles. We developed an integrative framework to study the spatial patterns in genetic diversity, demographic trends, habitat suitability modelling and landscape genetics, to evaluate the evolutionary response of Mediterranean‐type freshwater fish to seasonal fluctuations in weather. To test this evolutionary response, the model species used was Squalius valentinus, an endemic cyprinid of the Spanish Levantine area, where seasonal weather fluctuations are extreme, although our findings may be extrapolated to other Mediterranean‐type species. Our results underscore the significant role of the Mediterranean climate, along with Pleistocene glaciations, in diversification of S. valentinus. We found higher nuclear diversity in larger drainage basins, but higher mitochondrial diversity correlated to habitat suitability rather than basin size. We also found strong correlation between genetic structure and climatic factors associated with Mediterranean seasonality. Demographic and migration analyses suggested population expansion during glacial periods that also contributed to the current genetic structure of S. valentinus populations. The inferred models support the significant contribution of precipitation and temperature to S. valentinus habitat suitability and allow recognizing areas of habitat stability. We highlight the importance of stable habitat conditions, fostered by typical karstic springs found on the Mediterranean littoral coasts, for the preservation of freshwater species inhabiting seasonally fluctuating river systems. 相似文献
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A compilation of historical and recent collections and observations of shore fishes yielded 154 recorded species for Trindade and 67 for Martin Vaz. Twelve taxa, mostly small cryptobenthic species with limited dispersal capabilities and low ecological amplitude, are endemic to this insular complex. In several cases, the seamounts of the Vitória‐Trindade Chain appear to have acted as stepping stones between the mainland and islands in periods of low sea level. 相似文献
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Nicholas P. Murphy Martin F. Breed Michelle T. Guzik Steven J. B. Cooper Andrew D. Austin 《Journal of Biogeography》2012,39(9):1573-1582
Aim We investigate the phylogeographical history and determine the time‐scale of population divergence of hydrobiid freshwater snails (genus Trochidrobia) inhabiting groundwater springs in the Australian desert. We test the hypothesis that divergence between geographically distinct snail populations occurred simultaneously due to their isolation in hydrologically discrete spring systems, i.e. ‘trapped in desert springs’. Location Groundwater springs of the Great Artesian Basin (GAB) in central Australia. Methods DNA sequence data from the mitochondrial cytochrome c oxidase subunit I gene and the nuclear 28S and internal transcribed spacer rRNA genes were used to reconstruct phylogenetic relationships within and among three species of Trochidrobia (Hydrobiidae): T. punicea (13 spring groups, n = 90), T. smithi (12 spring groups, n = 62) and T. minuta (2 spring groups, n = 4). Bayesian relaxed molecular clock analyses and approximate Bayesian computation were used to date lineage divergence and distinguish between alternative biogeographical scenarios. Results The diversification of the three Trochidrobia species probably occurred between 2.54 and 9.3 Ma, prior to the formation of the springs c. 1 Ma. Intraspecific divergences within the two widespread species occurred after the formation and colonization of the springs. Coalescent modelling and molecular clock analyses supported a simultaneous radiation of five allopatric intraspecific snail lineages within T. punicea (two lineages) and T. smithi (three lineages) across the GAB springs examined. Main conclusions The analyses support the ‘trapped in desert springs’ hypothesis for the diversification of intraspecific lineages within the species T. punicea and T. smithi. This hypothesis suggests that the formation of deserts around Lake Eyre in the early Pleistocene led to the hydrological isolation of spring complexes in the GAB, resulting in significant molecular divergence, but no morphological divergence, of Trochidrobia snail populations. 相似文献
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Claire N. Greenwell Peter G. Coulson James R. Tweedley Neil R. Loneragan 《Journal of fish biology》2018,93(1):95-109
This study provides a comprehensive assessment of the dietary composition of the ambush predator Neosebastes pandus and compares the diets of 49 species from 39 studies of three benthic predatory families in the Scorpaeniformes: Scorpaenidae (20 species), Triglidae (19 species) and Platycephalidae (10 species). A total of 275 N. pandus were collected from the west (Rottnest Island) and south (Esperance) coasts of south‐western Australia and the percentage frequency and volumetric contribution of the stomach contents identified. Fish from the west coast consumed a greater mean number of broad taxonomic groups and were more diverse in their diet than fish from the south coast. Cephalopods, brachyurans and teleosts were the largest overall contributors to diet, with teleosts being more important to diets of west‐coast fish and polychaetes for south‐coast fish. This reflects differences in habitat between the two locations. Dietary composition also changed with increasing body size, reflecting morphological changes that allow bigger fish to capture and ingest larger, more mobile prey. Meta‐analysis of the diets of 49 species of scorpaenid, triglid and platycephalid revealed that they feed predominantly on teleosts and large crustaceans. Significant differences in diet were detected among families, with platycephalids being the most distinct and feeding more on teleosts than scorpaenids and triglids. 相似文献
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The damselfish Chromis limbata is native to the Macaronesian Archipelagos (Azores, Madeira and Canaries) and the western coast of Africa between Senegal and Angola. During the austral summers of 2008 and 2009 the species was recorded for the first time in the south‐western Atlantic Ocean around Campeche and Xavier Islands, in Florianópolis, Santa Catarina State, Brazil. Here, the progression of C. limbata in southern Brazilian waters is described using visual counts and genetic surveys and changes in the density of the native congener Chromis multilineata were also investigated. Underwater visual censuses of both Chromis species were carried out from 2009 to 2014. Chromis limbata tissue samples were collected and the mtDNA control region was sequenced and compared with mtDNA haplotypes from the natural range to confirm species identity, compare genetic diversity and to infer connectivity between newly established Brazilian populations. The Brazilian population of C. limbata increased significantly over the past 5 years and the effect on C. multilineata is still an open question, longer time‐series data will be necessary to clarify possible interactions. The molecular analyses confirmed species identity, revealed strong haplotype connectivity among Brazilian study sites and showed a low genetic diversity in Brazil when compared with the native populations, suggesting few individuals started the invasion. Four hypotheses could explain this colonizing event: C. limbata was released by aquarium fish keepers; larvae or juveniles were transported via ship ballast water; the species has rafted alongside oil rigs; they crossed the Atlantic Ocean through normal larval dispersal or naturally rafting alongside drifting objects. The rafting hypotheses are favoured, but all four possibilities are plausible and could have happened in combination. 相似文献
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Aim To assess phylogeographic pattern throughout the range of Metacrinia nichollsi in order to develop specific biogeographical hypotheses for the wet forests of south‐western Australia. This was carried out by contrasting a direct‐developing frog species, M. nichollsi, that breeds independently of free surface water with conventional, aquatic breeders and highly specialized direct developers. Location Wet forests of the south‐western Australian biodiversity hotspot – an area of high species richness and endemism for myobatrachid frogs and many other faunal groups. Methods We compiled an extensive phylogeographic data set from field‐collected samples based on mitochondrial ND2 sequences. Phylogenetic analyses combined with estimates of divergence times were used to build a model of major biogeographical events affecting the species. Phylogeographic analyses were used to provide insights into smaller‐scale processes acting within each major lineage. Results Phylogenetic analysis recovered three major lineages, with divergence dates coincident with late Miocene–early Pliocene arid cycles. One lineage was confined to geographically isolated populations in the Stirling Ranges (Stirling Ranges Lineage, SRL). The continuous range of M. nichollsi was split into two: the Main Range Lineage (MRL) and the Southern Coastal Lineage (SCL). The SCL displays a strong drainage‐based population structure, whereas the MRL displays a strong signature of recent expansion, suggesting that these two lineages have had very different biogeographical histories. Main conclusions Late Miocene–Pliocene aridity appears to have isolated populations in the Stirling Ranges and resulted in the formation of two additional lineages on a north–south gradient that are independent of southward‐flowing drainage systems. Our results demonstrate that climatic fluctuations are likely to have generated fine‐scale phylogeographic structure within M. nichollsi and that catchment regions are important refugia during arid cycles. 相似文献
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Peter R. Last William T. White Daniel C. Gledhill Alistair J. Hobday Rebecca Brown Graham J. Edgar Gretta Pecl 《Global Ecology and Biogeography》2011,20(1):58-72
Aim South‐eastern Australia is a climate change hotspot with well‐documented recent changes in its physical marine environment. The impact on and temporal responses of the biota to change are less well understood, but appear to be due to influences of climate, as well as the non‐climate related past and continuing human impacts. We attempt to resolve the agents of change by examining major temporal and distributional shifts in the fish fauna and making a tentative attribution of causal factors. Location Temperate seas of south‐eastern Australia. Methods Mixed data sources synthesized from published accounts, scientific surveys, spearfishing and angling competitions, commercial catches and underwater photographic records, from the ‘late 1800s’ to the ‘present’, were examined to determine shifts in coastal fish distributions. Results Forty‐five species, representing 27 families (about 30% of the inshore fish families occurring in the region), exhibited major distributional shifts thought to be climate related. These are distributed across the following categories: species previously rare or unlisted (12), with expanded ranges (23) and/or abundance increases (30), expanded populations in south‐eastern Tasmania (16) and extra‐limital vagrants (4). Another 9 species, representing 7 families, experienced longer‐term changes (since the 1800s) probably due to anthropogenic factors, such as habitat alteration and fishing pressure: species now extinct locally (3), recovering (3), threatened (2) or with remnant populations (1). One species is a temporary resident periodically recruited from New Zealand. Of fishes exhibiting an obvious poleward movement, most are reef dwellers from three Australian biogeographic categories: widespread southern, western warm temperate (Flindersian) or eastern warm temperate (Peronian) species. Main conclusions Some of the region's largest predatory reef fishes have become extinct in Tasmanian seas since the ‘late 1800s’, most likely as a result of poor fishing practices. In more recent times, there have been major changes in the distribution patterns of Tasmanian fishes that correspond to dramatic warming observed in the local marine environment. 相似文献
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In obligate seeding species, the germination niche is crucial for colonization and population survival. It is a high‐risk phase in a plant's life cycle, and is directly regulated by temperature. Seeds germinate over a range of temperatures within which there is an optimum temperature, with thresholds above and below which no germination occurs. We suggest that abrupt changes in temperature associated with a warming climate may cause a disconnect between temperatures seeds experience and temperatures over which germination is able to occur, rendering obligate seeding species vulnerable to decline and extinction. Using a bidirectional temperature gradient system, we examined the thermal constraints in the germination niche of some geographically restricted species from the low altitude mountains of the Stirling Range, southern Western Australia, including seedlots from lowland populations of four of these species. We demonstrated that high temperatures are not a limiting factor for germination in some restricted species, signifying a lack of relationship between geographic range size and breadth of the germination niche. In contrast, we identified other restricted species, in particular Sphenotoma drummondii, as being at risk of recruitment failure as a consequence of warming: seeds of this species showed a strong negative relationship between percentage germination and increasing temperature above a relatively low optimum constant temperature (13°C). We found some ecotypic differences in the temperature profiles between seeds collected from montane or lowland populations of Andersonia echinocephala, and while specific populations may become more restricted, they are perhaps at less risk of extinction from climate warming. This seed‐based approach for identifying extinction risk will contribute tangibly to efforts to predict plant responses to environmental change and will assist in prioritizing species for management actions, directing limited resources towards further investigations and can supplement bioclimatic modelling. 相似文献
11.
David B. Lindenmayer Peter Lane Mason Crane Daniel Florance Claire N. Foster Karen Ikin Damian Michael Chloe F. Sato Ben C. Scheele Martin J. Westgate 《Global Change Biology》2019,25(2):675-685
Species occurrence is influenced by a range of factors including habitat attributes, climate, weather, and human landscape modification. These drivers are likely to interact, but their effects are frequently quantified independently. Here, we report the results of a 13‐year study of temperate woodland birds in south‐eastern Australia to quantify how different‐sized birds respond to the interacting effects of: (a) short‐term weather (rainfall and temperature in the 12 months preceding our surveys), (b) long‐term climate (average rainfall and maximum and minimum temperatures over the period 1970–2014), and (c) broad structural forms of vegetation (old‐growth woodland, regrowth woodland, and restoration plantings). We uncovered significant interactions between bird body size, vegetation type, climate, and weather. High short‐term rainfall was associated with decreased occurrence of large birds in old‐growth and regrowth woodland, but not in restoration plantings. Conversely, small bird occurrence peaked in wet years, but this effect was most pronounced in locations with a history of high rainfall, and was actually reversed (peak occurrence in dry years) in restoration plantings in dry climates. The occurrence of small birds was depressed—and large birds elevated—in hot years, except in restoration plantings which supported few large birds under these circumstances. Our investigation suggests that different mechanisms may underpin contrasting responses of small and large birds to the interacting effects of climate, weather, and vegetation type. A diversity of vegetation cover is needed across a landscape to promote the occurrence of different‐sized bird species in agriculture‐dominated landscapes, particularly under variable weather conditions. Climate change is predicted to lead to widespread drying of our study region, and restoration plantings—especially currently climatically wet areas—may become critically important for conserving bird species, particularly small‐bodied taxa. 相似文献
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Gianluigi Ottaviani Gunnar Keppel Matteo Marcantonio Ladislav Mucina Grant Wardell‐Johnson 《Austral ecology》2019,44(4):575-580
Refugia are key environments in biogeography and conservation. Because of their unique eco‐evolutionary formation and functioning, they should display distinct functional trait signatures. However, comparative trait‐based studies of plants in refugia and non‐refugia are lacking. Here, we provide a comparison between resource‐rich (putative microrefugia for species preferring mesic habitats under increasing aridity) and resource‐impoverished woodlands (non‐refugia) around two granite outcrops in south‐western Australia. We measured and compared six functional traits (bark thickness, foliar δ13C, foliar C:N, leaf dry matter content, plant height, specific leaf area) in four woody species. We performed multiple‐trait, multiple‐species and single‐trait, within‐species analyses to test whether plants in resource‐rich habitats were functionally distinct and more diverse than those in the surrounding resource‐impoverished woodlands. We found that species in resource‐rich woodlands occupied larger and distinct multiple‐trait functional spaces and showed distinct single‐trait values (for specific leaf area and bark thickness). This suggests that plants in resource‐rich woodlands can deploy unique and more diverse ecological strategies, potentially making these putative microrefugia more resilient to environmental changes. These findings suggest that species in microrefugia may be characterised by unique functional signatures, illustrating the utility of comparative trait‐based approaches to improve understanding of the functioning of refugia. 相似文献
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Alison J. O’Donnell Matthias M. Boer W. Lachlan McCaw Pauline F. Grierson 《Journal of Biogeography》2011,38(1):112-124
Aim The aim of this study was to determine how spatial variation in vegetation type and landscape connectivity influence fire intervals in a semi‐arid landscape with low relief and complex mosaics of woodland and shrubland vegetation. Location Our study focused on a 15,500‐km2 area of relatively undisturbed and unmanaged land in south‐western Australia, referred to as the Lake Johnston region. Methods We modelled fire‐interval data from a 67‐year (1940–2006) digital fire history database using a two‐parameter Weibull function, and tested for the effects of vegetation type and landscape connectivity on estimates of the length of fire intervals (Weibull parameter b) and the dependence of fire intervals on fuel age (Weibull parameter c). Results Vegetation type and landscape connectivity significantly influenced fire interval probability distributions. Fire intervals in shrublands (dense low shrub assemblage) were typically shorter (b = 46 years) and more dependent on fuel age (c = 2.33) than most other vegetation types, while fire intervals in open eucalypt woodlands were much longer (b = 405 years) and were less dependent on fuel age (c = 1.36) than in shrub‐dominated vegetation types. Areas adjacent to or surrounded by salt lakes burnt less frequently (b = 319 years) and fire intervals were less dependent on fuel age (c = 1.48) compared with more exposed areas (e.g. b < 101 years, c > 1.68). Fire intervals in thickets (dense tall shrub assemblage) were longer (b = 101 years) than would be expected from fuel loads, most likely because they were protected from fire by surrounding fuel‐limited woodlands. Main conclusions Fire intervals in south‐western Australia are strongly influenced by spatial variation in vegetation (fuel structure) and landscape connectivity. The importance of fuel structure as a control of fire intervals in south‐western Australia contrasts with other landscapes, where topographical gradients or climatic influences may override the effects of underlying vegetation. We found that, regardless of low relief, topographical features such as large salt lake systems limited the connectivity and spread of fire among landscape units in an analogous manner to lakes or mountainous features elsewhere. 相似文献
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Owen F. Price Trent D. Penman Ross A. Bradstock Matthias M. Boer Hamish Clarke 《Journal of Biogeography》2015,42(11):2234-2245
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Sébastien Descamps Tycho Anker‐Nilssen Robert T. Barrett David B. Irons Flemming Merkel Gregory J. Robertson Nigel G. Yoccoz Mark L. Mallory William A. Montevecchi David Boertmann Yuri Artukhin Signe Christensen‐Dalsgaard Kjell‐Einar Erikstad H. Grant Gilchrist Aili L. Labansen Svein‐Håkon Lorentsen Anders Mosbech Bergur Olsen Aevar Petersen Jean‐Francois Rail Heather M. Renner Hallvard Strøm Geir H. Systad Sabina I. Wilhelm Larisa Zelenskaya 《Global Change Biology》2017,23(9):3770-3780
Global warming is a nonlinear process, and temperature may increase in a stepwise manner. Periods of abrupt warming can trigger persistent changes in the state of ecosystems, also called regime shifts. The responses of organisms to abrupt warming and associated regime shifts can be unlike responses to periods of slow or moderate change. Understanding of nonlinearity in the biological responses to climate warming is needed to assess the consequences of ongoing climate change. Here, we demonstrate that the population dynamics of a long‐lived, wide‐ranging marine predator are associated with changes in the rate of ocean warming. Data from 556 colonies of black‐legged kittiwakes Rissa tridactyla distributed throughout its breeding range revealed that an abrupt warming of sea‐surface temperature in the 1990s coincided with steep kittiwake population decline. Periods of moderate warming in sea temperatures did not seem to affect kittiwake dynamics. The rapid warming observed in the 1990s may have driven large‐scale, circumpolar marine ecosystem shifts that strongly affected kittiwakes through bottom‐up effects. Our study sheds light on the nonlinear response of a circumpolar seabird to large‐scale changes in oceanographic conditions and indicates that marine top predators may be more sensitive to the rate of ocean warming rather than to warming itself. 相似文献
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Tanya M. Llorens Bronwyn Macdonald Shelley McArthur David J. Coates Margaret Byrne 《Botanical journal of the Linnean Society. Linnean Society of London》2015,177(1):96-111
Effective conservation management should target appropriate conservation units, but evolutionarily and genetically divergent lineages within nominal taxa are often unrecognized. The south‐western Australian biodiversity hotspot may harbour many cryptic taxa, as it contains many plant species with naturally fragmented population distributions. Using microsatellite markers, we tested the hypothesis that disjunct population groups in the rare species Eremophila microtheca and E. rostrata (Scrophulariaceae: Myoporeae) are highly genetically divergent and represent separate evolutionarily significant units (ESUs). Chromosome counts indicated that all individuals assessed were diploid (2n = 36). Genetic differentiation among disjunct population groups was highly significant (P < 0.001) for both E. microtheca (FST = 0.301–0.383; Dest = 0.756–0.774) and E. rostrata (FST = 0.325–0.346; Dest = 0.628–0.660), and was similar to their differentiation from allied species. These results, including high incidences of private alleles, suggest historical divergence among cryptic taxa within E. microtheca and E. rostrata. Population groups in E. rostrata have recently been taxonomically recognized as two subspecies. Our study suggests that E. microtheca should also be reassessed as two taxa or considered as two ESUs, and the southern occurrence should be listed as Critically Endangered. We suggest a precautionary approach for flora in this and similar landscapes, whereby historically wide geographical disjunctions are assumed to indicate separate units for conservation. © 2014 State of Western Australia. Botanical Journal of the Linnean Society © 2014 The Linnean Society of London, 2015, 177 , 96–111. 相似文献
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Benedikt Fest Tim Wardlaw Stephen J. Livesley Thomas J. Duff Stefan K. Arndt 《Global Change Biology》2015,21(11):4250-4264
Disturbance associated with severe wildfires (WF) and WF simulating harvest operations can potentially alter soil methane (CH4) oxidation in well‐aerated forest soils due to the effect on soil properties linked to diffusivity, methanotrophic activity or changes in methanotrophic bacterial community structure. However, changes in soil CH4 flux related to such disturbances are still rarely studied even though WF frequency is predicted to increase as a consequence of global climate change. We measured in‐situ soil–atmosphere CH4 exchange along a wet sclerophyll eucalypt forest regeneration chronosequence in Tasmania, Australia, where the time since the last severe fire or harvesting disturbance ranged from 9 to >200 years. On all sampling occasions, mean CH4 uptake increased from most recently disturbed sites (9 year) to sites at stand ‘maturity’ (44 and 76 years). In stands >76 years since disturbance, we observed a decrease in soil CH4 uptake. A similar age dependency of potential CH4 oxidation for three soil layers (0.0–0.05, 0.05–0.10, 0.10–0.15 m) could be observed on incubated soils under controlled laboratory conditions. The differences in soil CH4 uptake between forest stands of different age were predominantly driven by differences in soil moisture status, which affected the diffusion of atmospheric CH4 into the soil. The observed soil moisture pattern was likely driven by changes in interception or evapotranspiration with forest age, which have been well described for similar eucalypt forest systems in south‐eastern Australia. Our results imply that there is a large amount of variability in CH4 uptake at a landscape scale that can be attributed to stand age and soil moisture differences. An increase in severe WF frequency in response to climate change could potentially increase overall forest soil CH4 sinks. 相似文献
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