New species and reports of <Emphasis Type="Italic">Hypoxylon</Emphasis> from Argentina recognized by a polyphasic approach

A preliminary account of Hypoxylon species (Xylariaceae) from the hitherto widely unexplored “Yungas” mountain forests of Northwest Argentina is presented. Two new species are described based on extensive morphological, molecular (ITS region of rDNA, partial β-tubulin gene) and chemotaxonomic data. Hypoxylon spegazzinianum is close to H. erythrostroma, but differs by larger ascospores and a virgariella-like asexual morph. Hypoxylon calileguense resembles H. subgilvum when growing on wood, but can be distinguished by larger ascospores and a fawn to brick stromatal surface colour. Stromata found on bark have affinities to H. pelliculosum, but differ in their stromatal surface colour and conspicuous amyloid apical apparatus. In addition, nine taxa of Hypoxylon are reported for Argentina for the first time, and some details on their asexual state and stromatal secondary metabolites are reported. An updated dichotomous key for Hypoxylon species from Argentina is provided.     

Recognition of hypoxyloid and xylarioid <Emphasis Type="Italic">Entonaema</Emphasis> species and allied <Emphasis Type="Italic">Xylaria</Emphasis> species from a comparison of holomorphic morphology,HPLC profiles,and ribosomal DNA sequences

The genus Entonaema comprises Xylariaceae with hollow, gelatinous stromata that accumulate liquid. Some of its species, including the type species, appear related to Daldinia from a polyphasic approach, comprising morphological studies, comparisons of ribosomal DNA sequences, and high performance liquid chromatography (HPLC) profiles with diode array and mass spectrometric detection (HPLC-DAD-MS). This methodology was used to study Entonaema pallidum. Its major stromatal constituent was identified as xylaral, a secondary metabolite known from Xylaria polymorpha. This compound was detected in several Xylaria spp., including the tropical X. telfairii and morphologically similar taxa, whose stromata may also become hollow and filled with liquid. Cultures of E. pallidum resembled those of Xylaria, substantially differing from other Entonaema spp., in their morphology, 5.8S/ITS nrDNA sequences, and HPLC profiles. The type specimen of E. mesentericum was located in the spirit collection of the herbarium B and found to agree morphologically with the nomenclatorily younger E. pallidum. Traces of xylaral were even detected by HPLC-DAD-MS in the spirit in which the fungus had been preserved. Entonaema pallidum is thus regarded as a later synonym of E. mesentericum. Therefore, the latter name is transferred to Xylaria. A key to entonaemoid Xylariaceae is provided. Colour reactions (NH₃, KOH) of the ectostroma were applied to a limited number of Xylaria spp., but metabolite profiles of cultures appear more promising as chemotaxonomic traits to segregate this genus. As xylaral was also found in Nemania and Stilbohypoxylon spp., while being apparently absent in Hypoxylon and allied genera, it may be a chemotaxonomic marker for Xylariaceae with Geniculosporium-like anamorphs.     

<Emphasis Type="BoldItalic">Barrmaelia</Emphasis> and <Emphasis Type="BoldItalic">Entosordaria</Emphasis> in Barrmaeliaceae (fam. nov., Xylariales) and critical notes on <Emphasis Type="BoldItalic">Anthostomella</Emphasis>-like genera based on multigene phylogenies

Phylogenetic analyses of a combined DNA data matrix containing ITS, LSU, rpb2 and tub2 sequences of representative Xylariales revealed that the genus Barrmaelia is a well-defined monophylum, as based on four of its described species (B. macrospora, B. moravica, B. oxyacanthae, B. rhamnicola) and the new species B. rappazii. The generic type of Entosordaria, E. perfidiosa, is revealed as the closest relative of Barrmaelia, being phylogenetically distant from the generic type of Clypeosphaeria, C. mamillana, which belongs to Xylariaceae sensu stricto. Entosordaria and Barrmaelia are highly supported and form a distinct lineage, which is recognised as the new family Barrmaeliaceae. The new species E. quercina is described. Barrmaelia macrospora, B. moravica and B. rhamnicola are epitypified and E. perfidiosa is lecto- and epitypified. Published sequences of Anthostomella and several Anthostomella-like species from the genera Alloanthostomella, Anthostomelloides, Neoanthostomella, Pseudoanthostomella and Pyriformiascoma are evaluated, demonstrating the necessity of critical inspection of published sequence data before inclusion in phylogenies. Verified isolates of several species from these genera should be re-sequenced to affirm their phylogenetic affinities. In addition, the generic type of Anthostomella should be sequenced before additional generic re-arrangements are proposed.     

Assessing <Emphasis Type="Italic">Azorella</Emphasis> (Apiaceae) and its allies: Phylogenetics and a new classification

Phylogenetic analyses of nuclear rDNA spacers (ITS and ETS) from Azorella and five closely related genera confirm earlier plastid results indicating that Azorella, Huanaca, Mulinum, and Schizeilema are all polyphyletic, and that the monotypic genus Laretia is nested within one of the six subclades of Azorella. Only Stilbocarpa is monophyletic, but that genus is embedded within a larger clade that includes representatives of three other genera (Azorella, Huanaca, and Schizeilema). Both nuclear and plastid datasets identify the same 10 clades, but the placement of these clades remains unstable. A new classification is presented in which these six genera are reduced to a single genus (Azorella) comprising 58 species arranged in 10 sections, one of which is newly described here (Azorella sect. Ranunculus), and one lectotypified (Azorella sect. Glabratae). A total of 13 new combinations are made (A. albovaginata, A. allanii, A. boelckei, A. burkartii, A. colensoi, A. echegarayi, A. echinus, A. hallei, A. lyallii, A. polaris, A. prolifera, A. robusta, A. ulicina), along with three replacement names (A. atacamensis, A. ruizii, A. schizeilema). For each of the 58 accepted species, a full synonymy is provided along with geographic ranges (and nomenclatural notes, where useful).     

Revision of the systematics of algae in the order Laminariales (Phaeophyta) from the Far-Eastern Seas of Russia on the basis of molecular-phylogenetic data

An overview of the literature changes in the systematics of algae in the order Laminariales (Phaeophyta) based on molecular phylogentic data is given. In a recent taxonomic revision by Lane et al., [45], the number and status of the families traditionally included in the order have been revised. One family was transferred to the order Tilopteridales; a new family, the Costariaceae, was described; and the genus Laminaria was split into 2 genera, Laminaria and a newly resurrected genus Saccharina. These innovations have necessitated a systematic revision of the Far Eastern species of the Laminariales. Our genetic studies indicate that 2 species of Laminaria and 12 intraspecific taxa (1 subspecies and 11 forms) from the Russian Pacific coasts should be transferred to the genus Saccharina. The following new nomenclatural combinations are proposed: Saccharina bongardiana, comb. nov. (including 4 forms: f. bifurcata, f. subsessilis, f. subsimplex, f. taeniata) and Saccharina gurjanovae, comb. nov. (including f. lanciformis). In addition, new nomenclature combinations are proposed for intraspecific taxa of the Laminaria species (L. angustata, L. cichorioides, L. japonica) that have already been transferred to the genus Saccharina [45]. These include S. angustata subsp. sibirica, comb. nov., 4 new combinations for the forms of S. cichorioides (f. coriacea, f. sacchalinensis, f. sikotanensis, and f. sinuicola), and 2 new combinations for the forms of S. japonica (f. diabolica, and f. longipes). The taxonomic status of the rest of the members of the Laminariales known from the seas of the Russian Far East is discussed. Laminariaceous algae in this area represent 6 of the 8 known families currently included in the Laminariales (Chordaceae, Pseudochordaceae, Alariaceae, Arthrothamnaceae, Laminariaceae, and Costariaceae).     

First phylogenetic analysis of the tribe Oligaphorurini (Collembola: Onychiuridae) inferred from morphological data,with implications for generic classification

Oligaphorurini represent tribe of the subfamily Onychiurinae, which currently comprises 5 genera and 53 species. The present study evaluated the monophyly of Oligaphorurini genera. We investigated phylogenetic relationships among 39 species, representing all extant genera of Oligaphorurini. Both equal- and implied-weighting parsimony analyses were used in phylogenetic reconstruction. The cladistic analyses were based on comprehensive survey of adults’ morphological characters because specimens suitable for molecular studies were not available for the majority taxa. The phylogenetic analysis resulted in the recognition of a monophyletic Chribellphorura, and strongly supported non-monophyly of the previously recognized genera Archaphorura, Dimorphaphorura, Micraphorura, and Oligaphorura. The following new synonymy is recognized: Oligaphorura = Dimorphaphorura syn. nov., = Micraphorura syn. nov., = Archaphorura syn. nov. The general classification of Oligaphorurini is followed by the diagnoses of genera and key to the all known species.     

<Emphasis Type="Italic">Pattersoniomyces tillandsiae</Emphasis> gen. et comb. nov.: linking sexual and asexual morphs of the only known smut fungus associated with Bromeliaceae

The enigmatic species Ustilago tillandsiae is the only known smut fungus associated with Bromeliaceae. Its generic position is evaluated by morphological, physiological, and molecular phylogenetic analyses using large subunit rDNA sequences. Phylogenetic analyses resolved U. tillandsiae as a member of the Ustilaginales in a sister relationship to the lineage containing Tranzscheliella species. However, U. tillandsiae differs from Tranzscheliella species by the development of sori in flowers, a different structure of sori and a different type of spore ornamentation. Consequently, a new genus Pattersoniomyces is described to accommodate U. tillandsiae. The new combination Pattersoniomyces tillandsiae is substantiated. In the sexual stage (teleomorph), this species infects bromeliads: Tillandsia flabellata, Tillandsia leiboldiana, and Tillandsia sp. in Central America between southern Mexico and Costa Rica. The yeast stage (anamorph) of P. tillandsiae was found associated with the phylloplane of Canistrum improcerum and in water tanks (phytotelmata) of Vriesea minarum, two bromeliads occurring in northeast and southeast Brazil, respectively. The link between the teleomorph and anamorphic strains is supported by identical sequences of the D1/D2 domains of the large subunit rDNA. Pattersoniomyces represents the tenth endemic smut genus to the Americas, but the only one that occurs in both North and South America, being a truly neotropical genus. The host plant families of Ustilaginales are extended to the Bromeliaceae. As far as we know, Pattersoniomyces represents the single event of a host jump from Cyperaceae or Poaceae to Bromeliaceae, apparently without further species radiation on multiple bromeliad species and genera growing in South America.     

Materials on the flora of Bacillariophyta in aquatic ecosystems of the Yarayakha River basin (Yamal Peninsula)

The study of phytoplankton in lakes, sors, streams, and rivers of the Yarayakha River basin with the help of scanning electron microscopy has made it possible to broaden the taxonomic spectrum of Bacillariophyta; 236 specific and intraspecific taxa from 63 genera are detected. A total of 16 species and varieties that are new for the flora of Russia were documented; 30 forms from 18 genera are identified only to the species. The maximum species diversity is recorded in a stream in the Yarayakha River mouth (82 species) and in the channel of the Khureikhotarka River (105 species). Species such as Cyclotella meneghiniana, Fragilaria exiguiformis, Navicula hanseatica, Neidium bisulcatum, Stauroneis anceps, Thalassiosira inserta, and Tabellaria flocculosa are the most widespread in the waterbodies.     

Notes on the phylogenetic relationships of planthoppers of the family issidae (Hemiptera,Fulgoroidea) of the Western Palaearctic fauna,with descriptions of two new genera

Seven groups of genera are distinguished in the subtribe Issina Spinola. The new genera Apedalmus gen. n. (the type species Falcidius abruzicus Dlabola, 1983) and Thalassana gen. n. (the type species: Hysteropterum ephialtes Linnavuori, 1971) are erected. The subgenera Acrestia Dlabola, 1980, Montissus Gnezdilov, 2003, and Atticus Gnezdilov, 2003 are upgraded to genera. The subgenus Capititudes Gnezdilov, Drosopoulos et Wilson, 2004 is transferred to the genus Acrestia, and the subgenus Stygiata Emeljanov, 1972 to Celyphoma Emeljanov, 1971. The subtribe Agalmatiina Gnezdilov, 2002 and the subfamily Hysteropterinae Melichar, 1906 are placed in synonymy under Issina Spinola, 1839. Issus reticulatus Herrich-Schäffer, 1835 is designated as the type species of the genus Hysteropterum Amyot et Serville, 1843.     

Reconstruction of molecular phylogeny of closely related <Emphasis Type="Italic">Amorphophallus</Emphasis> species of India using plastid DNA marker and fingerprinting approaches

Plastid DNA markers sequencing and DNA fingerprinting approaches were used and compared for resolving molecular phylogeny of closely related, previously unexplored Amorphophallus species of India. The utility of individual plastid markers namely rbcL, matK, trnH–psbA, trnLC–trnLD, their combined dataset and two fingerprinting techniques viz. RAPD and ISSR were tested for their efficacy to resolves Amorphophallus species into three sections specific clades namely Rhaphiophallus, Conophallus and Amorphophallus. In the present study, sequences of these four plastid DNA regions as well as RAPD and ISSR profiles of 16 Amorphophallus species together with six varieties of two species were generated and analyzed. Maximum likelihood and Bayesian Inference based construction of phylogenetic trees indicated that among the four plastid DNA regions tested individually and their combined dataset, rbcL was found best suited for resolving closely related Amorphophallus species into section specific clades. When analyzed individually, rbcL exhibited better discrimination ability than matK, trnH–psbA, trnLC–trnLD and combination of all four tested plastid markers. Among two fingerprinting techniques used, the resolution of Amorphophallus species using RAPD was better than ISSR and combination of RAPD +ISSR and in congruence with resolution based on rbcL.     

DNA analysis reveals rich diversity of <Emphasis Type="Italic">Hydnotrya</Emphasis> with emphasis on the species found in China

Molecular analysis of the truffle genus Hydnotrya was conducted with nrDNA-ITS sequences available including newly generated sequences from Chinese specimens. Twenty-one phylotypes were recognized with the threshold of 97% ITS identity. Seven phylotypes corresponded to the described species, H. bailii, H. cerebriformis, H. cubispora, H. laojunshanensis, H. michaelis, H. cf. variiformis, and H. tulasnei, and four phylotypes represented by Chinese specimens were described and illustrated as new species, i.e., H. badia, H. brunneospora, H. nigricans, and H. puberula. The remaining ten phylotypes may represent undescribed species. Moreover, the 21 phylotypes grouped into four distinct clades each having as core species H. cerebriformis, H. cubispora, H. michaelis, and H. tulasnei, respectively, which were strongly supported by phylogenetic analysis and morphological characterization.     

Resurrection of <Emphasis Type="Italic">Alebion difficile</Emphasis> (van Beneden, 1892) (Copepoda: Siphonostomatoida: Caligidae) with notes on other species of <Emphasis Type="Italic">Alebion</Emphasis> Krøyer, 1863 collected from elasmobranchs off South Africa and an updated key of the adult females

Alebion Krøyer, 1863 is one of the genera of the Caligidae Burmeister, 1835 and can easily be distinguished from other genera by the presence of modified exopodal spines on legs 1–3. Currently there are eight recognised species infecting a variety of elasmobranch hosts. Alebion difficile (van Beneden, 1892) is resurrected based on the difference in the structure of the spermatophores on the genital complex of the female but also the difference in the relative lengths of the posterior processes of the genital complex, the lateral processes on the first abdominal somite and the caudal rami. Additionally, the adult male of A. difficile is described and illustrated and notes provided about the morphology of the sub-adult females and males. Other Alebion species and their hosts collected off South Africa are reported and an updated key to the adult females of the species of Alebion is provided.     

Identification and Pathogenicity of Fungal Pathogens Causing Black Point in Wheat on the North China Plain

Fungi associated with black point were isolated from three highly susceptible wheat genotypes in the North China Plain. The 21 isolates represented 11 fungal genera. The most prevalent genera were Alternaria (isolation frequency of 56.7%), Bipolaris (16.1%), and Fusarium (6.0%). The other eight genera were Curvularia, Aspergillus, Cladosporium, Exserohilum, Epicoccum, Nigrospora, Penicillium, and Ulocladium; their isolation frequencies ranged from 0.8 to 4.8%. The pathogenicity of the isolates was individually assessed in the greenhouse by inoculating wheat plants with spore suspensions. Ten of the 21 isolates caused significantly higher incidences of black point than that the controls. These isolates belonged to eight fungal species (A. alternata, B. sorokiniana, B. crotonis, B. cynodontis, C. spicifera, F. equiseti, E. rostratum, and E. sorghinum) based on morphological traits and phylogenetic analysis. The average incidences of black point in the eight fungal species were 32.4, 54.3, 43.0, 41.9, 37.2, 38.8, 50.1, and 34.1%, respectively. B. sorokiniana and A. alternata were determined to be the most important pathogens in the North China Plain based on fungal prevalence and symptom severity. This study is the first to identify E. rostratum as a major pathogen causing black point in wheat.     

Comparative wood anatomy of the Cupressaceae and correspondence with phylogeny,with special reference to the monotypic taxa

Wood anatomy is one of the tools used for taxonomic classification of species. By combining this tool with molecular phylogeny, the current groupings made in morphological studies can be discussed. This study describes the wood anatomy of the monotypic genera of Cupressaceae and analyses the features that could represent synapomorphies of the principal clades recovered by molecular phylogeny. The wood anatomical study shows the high homogeneity of this family, revealing the presence of common ancestral features that support the union between Taxodiaceae and Cupressaceae s.s. and the separation of Sciadopitys. It also supports the group formed by Taxodiaceae in Cupressaceae s.l. No clear division was observed between the callitroid and cupressoid clades. Some wood anatomical differences were observed in the Fitzroya–Diselma–Pilgerodendron and Microbiota–Platycladus–Tetraclinis associations. The wood anatomical features common to the family, such as axial tracheids without helical thickenings, homogeneous rays, cupressoid cross-field pits and the presence of a warty layer, are put forward as possible synapomorphies for Cupressaceae s.l. The clade-specific synapomorphies are taxodioid cross-field pits for taxodioid and sequoioid clades, absence of a well-defined torus in Thuja–Thujopsis and torus extensions in Diselma–Fitzroya–Widdringtonia.     

A revision of <Emphasis Type="Italic">Sphaeria pilosa</Emphasis> Pers. and re-evaluation of the Trichosphaeriales

Sphaeria pilosa, the basionym of the type of Trichosphaeria, T. pilosa, was insufficiently described by Persoon. The current interpretation of T. pilosa comes from Fuckel and is based on his own material published in the exsiccatal series Fungi Rhen. Exs. no. 946. The examination of the type and other authentic material of S. pilosa and T. pilosa revealed several different fungi. Fresh material of T. pilosa is not available and Fuckel’s historical specimens have never been sampled for DNA. In order to reconcile Persoon’s concept of S. pilosa with Fuckel’s concept of T. pilosa, we designate a neotype in our study. The species is a unitunicate ascomycete characterized by perithecial ascomata, persistent paraphyses, and cylindrical short-stipitate asci without visible apical annulus containing eight hyaline, ellipsoidal ascospores. The genus Trichosphaeria includes 87 described species and the Trichosphaeriales with the single family Trichosphaeriaceae recently accommodate 17 genera of apparently diverse phylogenetic affinity. Although the relationship of Trichosphaeria with other members of the Sordariomycetes is unknown, the family and order based on it are widely used to label incertae sedis clades inferred in phylogenetic analyses. Based on these findings, the Trichosphaeriales are re-evaluated and their use in phylogenetic studies is recommended to be abandoned until recognition of T. pilosa by molecular data.     

Orbilia tianmushanensis sp. nov., a new member of the O. luteorubella group with an unusual asexual morph

A new species of Orbilia related to O. luteorubella is described mainly based on morphological characters of its asexual morph and molecular data. The sexual morph does not significantly differ from O. luteorubella, whereas the asexual morph obtained from its ascospore isolate resembles members of the non-predacious genus Dactylella, because it has fusiform phragmoconidia borne singly at the apex of conidiophores. Phylogenetic analysis showed that this strain clustered with a clade that included available strains of the O. luteorubella aggregate and was distant from all analysed Dactylella species. Within this clade, the new strain fell between species with filiform conidia and those of a Pseudotripoconidium anamorph. By combining morphological and phylogenetic analyses, we conclude that our isolate belongs to a new taxon. Pleomorphism of the new taxon is described and discussed.