β-甘露聚糖酶的酶学性质、工农业应用及基因工程研究

甘露聚糖类物质是自然界中半纤维素的第二大组分。β-甘露聚糖酶能水解底物生成甘露 寡糖,释放出与之结合的水分、微量元素等。应用于猪、鸡、鸭和水产动物日粮,可提高饲料的利 用效率,减少养殖业环境污染。甘露寡糖具有改善动物胃肠道微生态环境的功能。多种细菌、真 菌、软体动物等分泌β-甘露聚糖酶,其基因属于糖基水解酶家族5。β-甘露聚糖酶在工农业生产 和环境保护等方面有着广泛的用途。就β-甘露聚糖酶的酶学特性、研究历史、应用技术、效果和 作用机理,特别是其基因工程技术研究进展等作了概述。     

β-甘露聚糖酶分子生物学研究进展

本文概述了β-甘露聚糖酶的来源,以及近年来对微生物、植物、动物来源的β-甘露聚糖酶的分子生物学研究进展,包括基因结构分析、氨基酸序列分析、基因克隆、基因的异源表达及其应用领域等,以期为β-甘露聚糖酶的研究提供进一步的参考。     

一株产耐高温β-甘露聚糖酶菌株的筛选鉴定

目的:筛选鉴定一株产耐高温β-甘露聚糖酶的天然菌株。方法:通过形态、生理生化特征及16S rDNA比对,对从水温高于68℃的热泉中分离出的一株产β-甘露聚糖酶细菌进行鉴定。结果:该菌株的最适生长温度为50℃,可在35～80℃条件下生长,确定为一种极端嗜热枯草芽胞杆菌;该菌所产的β-甘露聚糖酶可耐受90℃高温处理。结论:产耐高温β-甘露聚糖酶极端嗜热枯草芽胞杆菌的筛选鉴定,为后续重组耐高温β-甘露聚糖酶的开发奠定了基础。     

极端嗜热微生物及其高温适应机制的研究进展

极端嗜热微生物在高温条件下生长繁殖,其必然具有适应高温环境的特殊细胞结构、基因类型以及生理生化机制。极端嗜热微生物的研究对探索生命的起源以及极端嗜热微生物的开发和应用具有重要意义。对极端嗜热微生物中细胞膜、核酸分子、蛋白质分子、代谢产物和辅酶的高温适应机制的研究进展进行了概述,旨为极端嗜热微生物以及来源于极端嗜热微生物的各种生物分子的开发和应用提供理论依据。     

草本纤维提取技术中的β-甘露聚糖酶研究

采用生物法提取草本纤维是纤维质产业的重要发展方向,而利用β-甘露聚糖酶降解非纤维素物质中的甘露聚糖是纤维生物提取技术中的关键环节.分析β-甘露聚糖酶降解和脱除非纤维素物质的机制,总结主要应用于生物脱胶和生物制浆领域的β-甘露聚糖酶及有关微生物的研究进展,提出草本纤维提取技术未来的重点研究方向,并对β-甘露聚糖酶的应用前景进行展望.     

极端微生物及其适应机理的研究进展

极端微生物是生物对极端环境适应的特殊种类 ,研究极端微生物的特性对探索生命的起源、微生物的育种及开发利用等具有重要意义。从嗜热微生物、嗜冷菌和耐冷菌、极端嗜酸微生物、嗜碱微生物、嗜盐微生物、嗜压微生物等方面总结了极端微生物及其适应机理的多样性以及其研究进展 ,旨在为极端微生物的开发利用提供一定的参考依据。     

嗜酸嗜热浸矿微生物

随着人们对浸矿菌的研究不断加深,嗜热嗜酸菌的浸矿潜力及在微生物冶金中的作用和地位得到认识,利用嗜热菌对矿石进行高效浸出已成为微生物冶金领域的研究重点。嗜热微生物包括中度嗜热微生物和极端嗜热微生物,主要栖息于热泉、工厂高温废水排放区以及火山口等高温环境中。本综述总结了嗜热浸矿微生物种类,分析了嗜中温菌和极端嗜热菌等嗜酸菌种的生长习性、利用的能源物质、浸矿能力等,并进一步介绍了嗜热嗜酸微生物在高温生物冶金中的发展及应用。     

极端嗜热古菌DNA修复核酸内切酶的研究进展

极端嗜热古菌由于生活在高温环境,其基因组DNA面临着严重的挑战,因此,它们如何维持其基因组稳定是本研究领域最为关注的科学问题之一。极端嗜热古菌具有与常温微生物相似的自发突变频率,暗示着它们比常温微生物具有更加有效的DNA修复体系进行修复高温所造成的基因组DNA损伤。目前,极端嗜热古菌DNA修复的分子机制尚不清楚。核酸内切酶在DNA修复途径中发挥着重要的作用。基因组序列显示极端嗜热古菌编码多种DNA修复核酸内切酶,但是其研究尚处于初期阶段。本文综述了极端嗜热古菌DNA修复核酸内切酶Nuc S、Endo V、Endo Q、XPF和Hjc的研究进展,并对今后的研究提出了展望。     

一株产甘露聚糖酶菌株的分离鉴定及酶的纯化与性质

【目的】筛选性能良好的产碱性甘露聚糖酶的菌株,对菌株进行多项分类鉴定,分离纯化所产甘露聚糖酶并进行性质研究。【方法】利用碱性魔芋粉培养基分离纯化产甘露聚糖酶的嗜碱菌,通过形态特征观察、生理生化测定、16S rRNA序列分析等实验确定菌株的分类地位。利用硫酸铵沉淀、阴离子交换层析和分子筛层析得到电泳纯的酶,分析了酶的最适温度、最适pH、温度和pH稳定性、NaCl以及金属离子等的耐受性。【结果】从我国内蒙古碱湖样品中分离得到一株产碱性甘露聚糖酶的菌株HMTS15,经过多项分类鉴定显示其是与Bacillus agaradhaerens DSM 8721不同的新菌株。菌株HMTS15所产的甘露聚糖酶反应的最适pH为10.0,最适温度75℃。【结论】多项分类结果鉴定菌株为Bacillus agaradhaerens HMTS15。该菌株产生的碱性甘露聚糖酶与同类其他来源的酶相比具有更好的热稳定性和pH适应性,有进一步的研究价值。     

嗜热微生物及其降解剩余污泥的机理

活性污泥法已经被广泛应用于污水处理中.剩余污泥是此过程的副产物,其处理费用约占污水处理系统总成本的25%～60%,处理不当则会带来严重的二次污染,成为目前污泥处理研究的难点之一.利用嗜热微生物降解污泥操作方便、经济性较好且易于管理,具有良好的应用前景.本文对污泥降解中的嗜热微生物、嗜热微生物污泥降解机理以及污泥降解过程中起重要作用的嗜热蛋白酶和脂肪酶的最新研究进展进行综述,归纳总结了影响嗜热微生物降解污泥的主要影响因素,并对嗜热微生物在污泥消化方面的应用研究进行展望.     

Structural prediction and comparative docking studies of psychrophilic ��- Galactosidase with lactose, ONPG and PNPG against its counter parts of mesophilic and thermophilic enzymes

Enzymes from psychrophiles catalyze the reactions at low temperatures with higher specific activity. Among all the psychrophilic enzymes produced, cold active β-galactosidase from marine psychrophiles revalorizes a new arena in numerous areas at industrial level. The hydrolysis of lactose in to glucose and galactose by cold active β-galactosidase offers a new promising approach in removal of lactose from milk to overcome the problem of lactose intolerance. Herein we propose, a 3D structure of cold active β-galactosidase enzyme sourced from Pseudoalteromonas haloplanktis by using Modeler 9v8 and best model was developed having 88% of favourable region in ramachandran plot. Modelling was followed by docking studies with the help of Auto dock 4.0 against the three substrates lactose, ONPG and PNPG. In addition, comparative docking studies were also performed for the 3D model of psychrophilic β-galactosidase with mesophilic and thermophilic enzymes. Docking studies revealed that binding affinity of enzyme towards the three different substrates is more for psychrophilic enzyme when compared with mesophilic and thermophilic enzymes. It indicates that the enzyme has high specific activity at low temperature when compared with mesophilic and thermophilic enzymes.     

Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

Understanding how proteins adapt to function at high temperatures is important for deciphering the energetics that dictate protein stability and folding. While multiple principles important for thermostability have been identified, we lack a unified understanding of how internal protein structural and chemical environment determine qualitative or quantitative impact of evolutionary mutations. In this work we compare equivalent clusters of spatially neighboring residues between paired thermophilic and mesophilic homologues to evaluate adaptations under the selective pressure of high temperature. We find the residue clusters in thermophilic enzymes generally display improved atomic packing compared to mesophilic enzymes, in agreement with previous research. Unlike residue clusters from mesophilic enzymes, however, thermophilic residue clusters do not have significant cavities. In addition, anchor residues found in many clusters are highly conserved with respect to atomic packing between both thermophilic and mesophilic enzymes. Thus the improvements in atomic packing observed in thermophilic homologues are not derived from these anchor residues but from neighboring positions, which may serve to expand optimized protein core regions.     

三个脐橙品种果实主要细胞壁酶动态变化研究

以罗伯逊脐橙、丰脐、纽荷尔脐橙果实为试材,对其果皮和果肉的果胶甲酯酶(PE)、多聚半乳糖醛酸酶(PG)、β-葡萄糖苷酶和纤维素酶(CX)的动态变化进行研究。结果表明,三个品种PE活性均为果肉明显高于果皮,其中纽荷尔和罗脐分别在果实膨大期、转色期和成熟期出现三个峰值;PE活性变幅纽荷尔大于罗脐,丰脐变化较平稳。PG活性果肉略高果皮,且皆在转色期开始快速升高。首次对脐橙果实β-葡萄糖苷酶研究表明,该酶活性微弱,成熟期活性最高,纽荷尔高于丰脐和罗脐;动态变化中果皮和果肉无明显差异。酶活性高峰出现的时间为PE早于PG和β-葡萄糖苷酶;PE和PG是影响脐橙果实发育的主要酶,β-葡萄糖苷酶可能是PE和PG的补充。     

Myceliophthora thermophila syn. Sporotrichum thermophile: a thermophilic mould of biotechnological potential

Myceliophthora thermophila syn. Sporotrichum thermophile is a ubiquitous thermophilic mould with a strong ability to degrade organic matter during optimal growth at 45?°C. Both genome analysis and experimental data have suggested that the mould is capable of hydrolyzing all major polysaccharides found in biomass. The mould is able to secrete a large number of hydrolytic enzymes (cellulases, laccases, xylanases, pectinases, lipases, phytases and some other miscellaneous enzymes) employed in various biotechnological applications. Characterization of the biomass-hydrolyzing activity of wild and recombinant enzymes suggests that this mould is highly efficient in biomass decomposition at both moderate and high temperatures. The native enzymes produced by the mould are more efficient in activity than their mesophilic counterparts beside their low enzyme titers. The mould is able to synthesize various biomolecules, which are used in multifarious applications. Genome sequence data of M. thermophila also supported the physiological data. This review describes the biotechnological potential of thermophilic mould, M. thermophila supported by genomic and experimental evidences.     

嗜热酶的耐热机理

酶蛋白在高温下的不稳定性是影响其广泛应用的主要瓶颈,嗜热酶因为独特的性质而被作为热稳定研究的极好材料。了解嗜热酶的热稳定性机制,对于采用酶工程定向设计、改造酶具有重要的意义。嗜热酶的热稳定性并不是由单一因素决定的,氨基酸组成、氢键、离子对、二硫键等都是影响嗜热酶热稳定性的重要因素。相对于嗜温酶,嗜热酶更多地采用寡聚体的形式。     

In vitro metabolic engineering for the salvage synthesis of NAD+

Excellent thermal and operational stabilities of thermophilic enzymes can greatly increase the applicability of biocatalysis in various industrial fields. However, thermophilic enzymes are generally incompatible with thermo-labile substrates, products, and cofactors, since they show the maximal activities at high temperatures. Despite their pivotal roles in a wide range of enzymatic redox reactions, NAD(P)⁺ and NAD(P)H exhibit relatively low stabilities at high temperatures, tending to be a major obstacle in the long-term operation of biocatalytic chemical manufacturing with thermophilic enzymes. In this study, we constructed an in vitro artificial metabolic pathway for the salvage synthesis of NAD⁺ from its degradation products by the combination of eight thermophilic enzymes. The enzymes were heterologously produced in recombinant Escherichia coli and the heat-treated crude extracts of the recombinant cells were directly used as enzyme solutions. When incubated with experimentally optimized concentrations of the enzymes at 60 °C, the NAD⁺ concentration could be kept almost constant for 15 h.     

糖原合酶激酶-3β在肿瘤细胞中的分子作用机制

糖原合酶激酶-3β(glycogen synthase kinase-3β,GSK-3β)是一种多功能丝氨酸/苏氨酸激酶,通过磷酸化酪氨酸、丝氨酸和苏氨酸位点介导Wnt、Hedgehog、NF-κB和PI3K/Akt等信号通路,参与各类细胞功能的调节。GSK-3β在不同信号通路和细胞类型中扮演不同的角色,导致其在不同的恶性肿瘤中发挥促癌或抑癌的双重作用,与癌细胞的迁移和侵袭有直接关系。在胰腺癌和结肠癌研究中,GSK-3β的高表达调控通过相关信号通路,增强细胞增殖调控因子表达,抑制负性调控因子的活性,促进癌细胞的增殖。GSK-3β能激活上皮细胞间质转型过程中相关因子的表达,增强癌细胞扩散能力;相反,在胃癌和肺癌中,GSK-3β具有积极的抑癌作用。GSK-3β通过阻滞细胞周期和诱导细胞凋亡发挥抑癌作用,通过调节Wnt和PI3K/Akt信号通路,负向调控癌细胞的生长与侵袭,并且GSK-3β磷酸化相关因子以减弱其对癌细胞转移能力的刺激。本文总结了GSK-3β在不同恶性肿瘤中的作用及机制,并针对研究中存在的问题进行分析与展望,为相关领域的研究提供一定的理论基础。     

沉默lycB基因对雨生红球藻类胡萝卜素合成代谢的影响

雨生红球藻是一种淡水浮游单细胞绿藻, 逆境条件下可积累大量的类胡萝卜素。番茄红素是类胡萝卜素中的一种, 是类胡萝卜素合成代谢中的一个重要中间产物。番茄红素β-环化酶(LycB)是催化番茄红素形成β-胡萝卜素的关键酶。文章以杜氏盐藻lycB基因为干扰序列, 构建了含卡那霉素与阿特拉津双抗性的RNAi载体p1301-BS-RNAi。将其电转化进雨生红球藻细胞, 经抗性筛选、基因组PCR及RT-PCR筛选, 获得了16个独立的干扰株系。选取生长良好的7个进行高光诱导, 发现其番茄红素含量增加了99.4%, β-胡萝卜素含量减少了48.4%, 即通过异源的lycB-RNAi基因沉默可抑制番茄红素向β-胡萝卜素的转化。对比分析发现, 番茄红素增加量仅是β-胡萝卜素减少量的5%, 表明因lycB-RNAi抑制而产生的番茄红素的95%又被其他通路转换成了其他代谢产物, 因此要实现雨生红球藻番茄红素含量的大幅增长, 需协同调控其他代谢通路。     

Production of β-Mannanase and β-Mannosidase from Aspergillus awamori K4 and Their Properties

β-Mannanase and β-mannosidase from Aspergillus awamori K4 was produced by solid culture with coffee waste and wheat bran. The optimum composition for enzyme production was 40% coffee waste–60% wheat bran. Two enzymes were partially purified. Optimum pH was about 5 for both enzymes, and optimum temperature was around 80°C for β-mannanase and 60–70°C for β-mannosidase. These enzymes produced some oligosaccharides from glucomannan and galactomannan by their hydrolyzing and transferring activities. β-Mannanase hydrolyzed konjak and locust bean gum 39.1% and 15.8%, respectively. Oligosaccharides of various molecular size were released from glucomannan of konjak, but on the addition of cellulase, mannobiose was released selectively. In locust bean gum, tetra-, tri-, and disaccharides (mannobiose) were mainly released by K4 β-mannanase. Tetra- and trisaccharides were heterooligosaccharides consisting of galactose and mannose residues. K4 β-mannosidase had a transglycosylation action, transferring mannose residue to alcohols and sugars like fructose. Received: 24 April 2000/Accepted: 20 October 2000     

Yap1 plays a protective role in suppressing free fatty acid-induced apoptosis and promoting beta-cell survival

Mammalian pancreatic β-cells play a pivotal role in development and glucose homeostasis through the production and secretion of insulin. Functional failure or decrease in β-cell number leads to type 2 diabetes (T2D). Despite the physiological importance of β-cells, the viability of β-cells is often challenged mainly due to its poor ability to adapt to their changing microenvironment. One of the factors that negatively affect β-cell viability is high concentration of free fatty acids (FFAs) such as palmitate. In this work, we demonstrated that Yes-associated protein (Yap1) is activated when β-cells are treated with palmitate. Our loss- and gain-of-function analyses using rodent insulinoma cell lines revealed that Yap1 suppresses palmitate-induced apoptosis in β-cells without regulating their proliferation. We also found that upon palmitate treatment, re-arrangement of F-actin mediates Yap1 activation. Palmitate treatment increases expression of one of the Yap1 target genes, connective tissue growth factor (CTGF). Our gain-offunction analysis with CTGF suggests CTGF may be the downstream factor of Yap1 in the protective mechanism against FFA-induced apoptosis.