A comparison of minirhizotron,core and monolith methods for quantifying barley (Hordeum vulgare L.) and fababean (Vicia faba L.) root distribution

Root research has been hampered by a lack of good methods and by the amount of time involved in making measurements. The use of the minirhizotron as a quantitative tool requires comparison with conventional destructive methods. This study was conducted in the greenhouse to compare the minirhizotron technique with core and monolith methods in quantifying barley (Hordeum vulgare L.) and fababean (Vicia faba L.) root distribution. Plants were grown in boxes (80 cm long × 80 cm wide × 75 cm deep) in a hexagonal arrangement to minimize the effects of rooting anistrophy. Minirhizotron observations and destructive sampling to a depth of 70 cm using core and monolith methods were performed at the ripening growth stage. Total root length for the entire depth interval was generally higher in barley (159–309 m) than fababean (110–226 m). Significant correlation coefficients between monolith and core methods for root length density (RLD, cm cm^–3) was observed in both crops (p 0.01). A method and depth interaction showed no significant differences in fababean RLD distribution measured by core and monolith methods. However, the RLD was different for the uppermost 40 cm depth in barley. The relationship for RLD between minirhizotron and core methods was significant only in barley (r=0.77^*). For both crops, estimates of RLD in the top 10-cm layer by the minirhizotron technique were lower than those by core and monolith techniques. In contrast, estimates of RLD were higher in fababean at a depth >30 cm. Destructive sampling still remains the method to quantify root growth in the 0–10 cm soil layer. ei]B E Clothier     

Micropropagation through excised root culture of Clitoria ternatea and comparison between in vitro–regenerated plants and seedlings

An efficient protocol has been developed for high‐frequency shoot regeneration and plant establishment of Clitoria ternatea – a potential medicinal legume. Adventitious shoots were regenerated from young excised root segments of aseptic seedlings on Murashige and Skoog (MS) medium supplemented with various concentrations of 6‐benzyladenine (BA), kinetin, α‐naphthalene acetic acid (NAA) or 2,4‐dichlorophenoxy acetic acid (2,4‐D) either singly or in various combinations. The highest frequency (100%) of shoot regeneration and maximum number (16.4 ± 0.24) of shoots per explant was obtained on MS medium supplemented with 20 μm BA and 2.0 μm NAA. Organogenic calli were produced on a medium containing 2,4‐D (10 or 20 μm ) and BA (5.0 μm ). The calli were differentiated into multiple shoots on MS medium supplemented with 2.5–10 μm BA and 2.0 μm NAA. The microshoots were rooted on half‐strength MS medium supplemented with 5.0 μm indole‐3‐butyric acid and transplanted successfully in field conditions. After 12 months of transfer to ex vitro conditions, the performance of micropropagated plants were evaluated on the basis of some physiological and biochemical parameters and compared with the in vivo–grown plants of the same age. The sodium dodecyl sulphate polyacrylamide gel electrophoresis protein profile was same between regenerated and naturally growing shoots. Total soluble protein in aerial part as well as in seeds of in vitro–regenerated and in vivo–grown plants was almost the same. The mitotic study showed normal chromosomal movement and numbers (2x = 16).     

Potassium uptake by plants,as characterized by root density,species and K/Rb ratio

Summary A small fraction of the plant K requirement is attained by root interception. The bulk of K has to be transported to the growing roots by mass-flow and diffusion in which diffusion mechanism plays the major role. Studies were undertaken to evaluate soil and plant parameters that might have influence on K supply mechanisms in soil and on plant uptake of K. Increasing wheat plant density led to competition for K absorption and resulted in lower K uptake by plant. In high plant density treatment, about 60% of the K requirement was met by diffusion process whereas in low plant density treatment mass-flow contributed most of the K demand. Solution diffusion and mass-flow were the major mechanisms of K supply to wheat roots. The mechanism of K supply to wheat root was compared with corn and onion. The major mechanism of K supply to corn and onion roots was exchange and solution diffusion. The mechanism of K supply to different crop species is attributable to differences in the K requirements, water flux rates and to the differences in root parameters.     

A global analysis of root distributions for terrestrial biomes

Understanding and predicting ecosystem functioning (e.g., carbon and water fluxes) and the role of soils in carbon storage requires an accurate assessment of plant rooting distributions. Here, in a comprehensive literature synthesis, we analyze rooting patterns for terrestrial biomes and compare distributions for various plant functional groups. We compiled a database of 250 root studies, subdividing suitable results into 11 biomes, and fitted the depth coefficient to the data for each biome (Gale and Grigal 1987). is a simple numerical index of rooting distribution based on the asymptotic equation Y=1-^d, where d = depth and Y = the proportion of roots from the surface to depth d. High values of correspond to a greater proportion of roots with depth. Tundra, boreal forest, and temperate grasslands showed the shallowest rooting profiles (=0.913, 0.943, and 0.943, respectively), with 80–90% of roots in the top 30 cm of soil; deserts and temperate coniferous forests showed the deepest profiles (=0.975 and 0.976, respectively) and had only 50% of their roots in the upper 30 cm. Standing root biomass varied by over an order of magnitude across biomes, from approximately 0.2 to 5 kg m^-2. Tropical evergreen forests had the highest root biomass (5 kg m^-2), but other forest biomes and sclerophyllous shrublands were of similar magnitude. Root biomass for croplands, deserts, tundra and grasslands was below 1.5 kg m^-2. Root/shoot (R/S) ratios were highest for tundra, grasslands, and cold deserts (ranging from 4 to 7); forest ecosystems and croplands had the lowest R/S ratios (approximately 0.1 to 0.5). Comparing data across biomes for plant functional groups, grasses had 44% of their roots in the top 10 cm of soil. (=0.952), while shrubs had only 21% in the same depth increment (=0.978). The rooting distribution of all temperate and tropical trees was =0.970 with 26% of roots in the top 10 cm and 60% in the top 30 cm. Overall, the globally averaged root distribution for all ecosystems was =0.966 (r ²=0.89) with approximately 30%, 50%, and 75% of roots in the top 10 cm, 20 cm, and 40 cm, respectively. We discuss the merits and possible shortcomings of our analysis in the context of root biomass and root functioning.     

Plant root distributions and nitrogen uptake predicted by a hypothesis of optimal root foraging

CO(2)-enrichment experiments consistently show that rooting depth increases when trees are grown at elevated CO(2) (eCO(2)), leading in some experiments to increased capture of available soil nitrogen (N) from deeper soil. However, the link between N uptake and root distributions remains poorly represented in forest ecosystem and global land-surface models. Here, this link is modeled and analyzed using a new optimization hypothesis (MaxNup) for root foraging in relation to the spatial variability of soil N, according to which a given total root mass is distributed vertically in order to maximize annual N uptake. MaxNup leads to analytical predictions for the optimal vertical profile of root biomass, maximum rooting depth, and N-uptake fraction (i.e., the proportion of plant-available soil N taken up annually by roots). We use these predictions to gain new insight into the behavior of the N-uptake fraction in trees growing at the Oak Ridge National Laboratory free-air CO(2)-enrichment experiment. We also compare MaxNup with empirical equations previously fitted to root-distribution data from all the world's plant biomes, and find that the empirical equations underestimate the capacity of root systems to take up N.     

A comparison between hairy root cultures and wild plants of Saussurea involucrata in phenylpropanoids production

Saussurea involucrata is an important medicinal plant that produces a few bioactive secondary metabolites, such as hispidulin, rutin, and syringin. Previously, we established a hairy root culture system for this species through Agrobacterium-mediated transformation. The present study addressed the issue as how hairy root cultures perform in phenylpronoid accumulation. From the ethanolic extract of a hairy root culture established for Saussurea involucrata, syringin, rutin and hispidulin, were isolated and their chemical structures were confirmed by HPLC-ESI-MS. A quantitative study of the compounds showed great levels of syringin and hispidulin (being 43.5±1.13 and 0.34±0.023 mg g⁻¹ dry weight, respectively), about 40 and 3 times, respectively, higher than those from wild plants. But, the levels of rutin from hairy roots were much lower (0.71±0.043 vs. 6.59±0.56 mg g⁻¹ dry weight). Compared with untransformed root cultures, syringin and hispidulin levels were also higher. An experiment on culture media showed that MS was superior to others for phenylpropanoids accumulation in hairy roots, a 28-day culture produced 405 mg l⁻¹ syringin.     

高寒草甸优势植物叶内、根内与土壤原核微生物群落的分异

植物内生菌具有帮助植物吸收营养元素,增强植物免疫力,抵御外界生物和非生物胁迫等功能。植物的根内和叶内存在大量的内生菌,影响着植物的健康生长。但不同植物地下(根内)和地上(叶内)内生原核微生物,以及与土壤微生物在组成和群落结构上的差异和联系还有待探索。以青藏高原高寒草甸三种优势植物青藏苔草(Carex moorcroftii)、火绒草(Leontopodium jacotianum)和高山嵩草(Carex parvula)为对象,研究了高寒草甸优势植物叶内、根内、土壤原核微生物组的组成及其与样品类型和植物类型之间的关系。结果表明:1)在门分类水平上,有13个门在土壤、叶内和根内之间有显著差异,只有5个门在不同植物之间有显著性差异,分别是变形菌门、厚壁菌门、酸杆菌门、疣微菌门以及FBP;2)在α多样性上,同种植物土壤、叶内、根内之间差异显著,而不同植物在土壤和根内差异显著,但在叶内无显著性差异;3)样品类型(叶内、根内以及土壤)是决定植物微生物组差异的最主要因子,对微生物群落变异的贡献度为20.13%;不同植物类型之间微生物群落也有显著性差异,植物类型对总变异的贡献率为14.41%,并且植...     

Impact of phosphorus supply on root exudation, aerenchyma formation and methane emission of rice plants

This study evaluated the impact of P supply on rice plant development and the methane budget of rice fields by 2 different approaches: (1) root growth, exudation and aerenchyma formation were recorded in an experiment with hydroponic solution; (2) dissolved CH₄ concentration and CH₄ emission were investigated in a pot experiment. In both approaches, we used three different cultivars and three levels of P supply. In the experiment with solution culture (0.5 ppm, 5 ppm, and 10 ppm P), root exudation ranged between 0.5 to 36.7 mol C plant^–1 h^–1 and increased steadily with plant growth at given P level. Low P supply resulted in

Evolving technologies for growing,imaging and analyzing 3D root system architecture of crop plants

A plant's ability to maintain or improve its yield under limiting conditions,such as nutrient de ficiency or drought,can be strongly in fluenced by root system architecture(RSA),the three-dimensional distribution of the different root types in the soil. The ability to image,track and quantify these root system attributes in a dynamic fashion is a useful tool in assessing desirable genetic and physiological root traits. Recent advances in imaging technology and phenotyping software have resulted in substantive progress in describing and quantifying RSA. We have designed a hydroponic growth system which retains the three-dimensional RSA of the plant root system,while allowing for aeration,solution replenishment and the imposition of nutrient treatments,as well as high-quality imaging of the root system. The simplicity and flexibility of the system allows for modi fications tailored to the RSA of different crop species and improved throughput. This paper details the recent improvements and innovations in our root growth and imaging system which allows for greater image sensitivity(detection of fine roots and other root details),higher ef ficiency,and a broad array of growing conditions for plants that more closely mimic those found under field conditions.     

Differences between calcifuge and acidifuge plants in root exudation of low-molecular organic acids

The nature and quantity of low-molecular organic acids (LOAs) exuded by the roots of nine species of calcifuge and nine species of acidifuge wild plants from northern Europe were determined by ion chromatography. Particular attention was paid to differences between the calcifuge and the acidifuge species in the proportions of different LOAs in their root exudates. Great differences in mol% root exudation between the calcifuge and the acidifuge species were found in some acids. The calcifuge species exuded more acetic acid, the acidifuge species more oxalic acid and much more citric acid. In three calcifuge species, however, root exudation of oxalic acid was appreciable, whereas acetic acid exudation was low in these species. The phosphate- and Fe-solubilizing ability of eight LOAs in a rhizosphere limestone soil was also tested. Oxalic acid was the most efficient phosphate solubilizer and citric acid, by far, the most efficient Fe-solubilizer at the concentration (10 mM) tested. It might be hypothesized that acidifuge species use oxalate to solubilize phosphate and citrate to solubilize Fe, in limestone soil. The inability of calcifuge species to grow in limestone soil might, therefore, be due to low root exudation of these acids and, as a result, inability to solubilize phosphate and Fe in limestone soil.     

Growth promotion and root colonisation in pepper plants by phosphate‐solubilising Chryseobacterium sp. strain ISE14 that suppresses Phytophthora blight

Previously, we selected bacterial strain ISE14 through a sequential selection procedure that included radicle, seedling, and in planta assays and field tests. This strain not only suppressed a destructive soilborne disease, Phytophthora blight, caused by Phytophthora capsici but also increased fruit yields of pepper plants in the fields. This study was conducted to identify strain ISE14 by 16S rRNA gene sequence analysis and to characterise biocontrol and plant growth promotion activities of the strain in pepper plants. Strain ISE14, identified as Chryseobacterium sp., significantly reduced disease severity in plants inoculated with Ph. capsici and promoted plant growth (lengths and dry weights of shoots and roots) compared with those in plants treated with Escherichia coli DH5α (negative control) or MgSO₄ solution (untreated control). This strain effectively colonised pepper plant roots as assessed by bacterial population analysis and confocal laser scanning microscopy; it enhanced soil microbial activity and biofilm formation, but not the production of indole acetic acid. Strain ISE14 also solubilised organic or inorganic phosphate by production of acid and alkaline phosphatases or reduction in pH, resulting in enhanced pepper plant growth. This strain exhibited similar or greater activity in disease control and plant growth promotion tests compared with positive control strains Paenibacillus polymyxa AC‐1 (biocontrol) and Bacillus vallismortis EXTN‐1 (plant growth). Therefore, Chryseobacterium sp. ISE14 may be a phosphate‐solubilising and plant growth‐promoting rhizobacterium (PGPR) strain that suppresses Phytophthora blight of pepper. To our knowledge, this is the first report of a phosphate‐solubilising PGPR strain of Chryseobacterium sp. that suppresses the pepper disease.     

北京维管植物编目和分布数据集

区域性维管植物编目对于该区域内植物多样性保护及植物资源可持续利用具有重要意义。北京作为中国首都, 尽管编目工作早在20世纪60年代就得以开展, 但近30年来没有进行系统更新。现有数据零散、不系统, 相关编目进展甚至已经落后于周边地区。本文在《北京植物志(1992年修订版)》的基础上, 结合多年实际野外调查, 通过系统检索文献资料对现有编目数据进行查漏补缺(补充新分类群、新记录)、修订名称(基于新分类修订成果)、更新分类系统(采用基于分子数据的新分类系统), 并添加物种等级、分布状态、生长状态、室内/室外、分布区、了解程度及保护状况等相关信息, 最终完成北京维管植物编目和分布数据集(分为本土植物和外来植物两个表单, 其中外来植物主要基于志书和文献记载)。截至2021年12月31日, 该数据集共有数据2,883条(本土1,680条, 外来1,203条), 其中包含北京本土野生维管植物134科611属1,597个类群(1,440种3天然杂交种46亚种97变种11变型), 与《北京植物志(1992年修订版)》相比增加3科26属173种4亚种28变种11变型, 其中列入《国家重点保护野生植物名录(2021)》的有16种(一级仅1种), 列入《北京市重点保护野生植物名录(2008)》的有90种3亚种4变种; 收录外来维管植物137科581属1,184个类群(含992种及其他种下等级), 其中栽培植物854种19杂交种15亚种29变种2变型87栽培品种38栽培群, 逸生植物132种1亚种, 归化植物77种2变种, 入侵植物27种。编目数据显示, 北京本土野生维管植物多样性整体上并不高, 主要以广泛分布的常见种为主, 特有种、狭域种以及珍稀濒危种数量不多; 同时, 北京存在大量的外来植物(许多种类在《北京植物志》各版中已经收录), 这些植物也是北京维管植物多样性的重要组成部分, 但现有数据尚不完整。     

无瓣海桑和白骨壤植株根系时空分布特征

无瓣海桑和白骨壤是我国红树林造林中较具代表性的两种植物,通过对10龄无瓣海桑纯林、10龄白骨壤纯林、6龄无瓣海桑纯林和6龄白骨壤纯林的调查分析发现:1)无瓣海桑和白骨壤植株根系水平分布的半径和地下根系垂直深度均随树龄的增加而增加,其中10龄无瓣海桑和白骨壤植株的水平分布半径分别为30.6 m和3.85 m,6龄无瓣海桑和白骨壤植株的水平分布半径为9.47 m和2.23 m; 10龄和6龄无瓣海桑和白骨壤植株的地下根系分布深度分别为60 cm和40 cm; 2)无瓣海桑和白骨壤植株地表呼吸根系密度、高度、基径的分布范围会随其树龄的增加而增加,但其根系密度、高度和基径总体表现为由树冠向外逐渐减小; 3)无瓣海桑和白骨壤植株地下根系主要分别于0—20 cm表层,地下根系密度随树龄的增加而增多,具体如10龄无瓣海桑和白骨壤根系分布深度为60 cm,其中76.3%和77.6%根系分布于0—20 cm深度; 6龄无瓣海桑和白骨壤根系分布深度为40 cm,其中91.9%和91.6%根系集中于0—20 cm土层。这些结果能为进一步理解红树林的促淤保滩功能提供新启示。     

Growth and root responses of woody species to rocky substrate: implications for gully rehabilitation

Gullies formed in the Velhas River basin in Brazil have been filled with urban construction waste for physical stabilisation purposes. Aimed at rehabilitating gullies, we selected woody species from the Brazilian Cerrado that can grow on rocky substrates under greenhouse conditions. An assessment was made regarding plant growth in both rocky and natural soil substrates by analysing the height, diameter, fresh and dry weights of shoots and roots, plant water content, root occupation and architecture. Principal component analysis and Chi-squared tests segregated rock-tolerant species based on the specific influence on root dry and fresh weights. Fast-growing species reduced the emergence of their lateral roots under rocks, compromising their growth in height and biomass production. In contrast, slow-growing woody species were particularly suitable for gully rehabilitation because these species exhibited a genetic pattern of low lateral root emergence that prevented damage to their roots. Most slow-growing species demonstrated a similar growth pattern in both substrates, and some of them, such as Copaifera langsdorffii, achieved better growth in height and biomass production on rocks than on soil, a finding attributed to the root plastic response involving primary root elongation and lateral root emergence. Therefore, slow-growing species are recommended for gully rehabilitation procedures.     

Tissue- and development-specific distributions of cytoskeletal elements in growing cells of the maize root apex

ABSTRACT

Indirect immunofluorescence performed using sections of actively growing maize root apices fixed and then embedded in low-melting-point Steedman's wax has proved efficient in revealing the arrangements and reorganizations of motility-related cytoskeletal elements which are associated with root cell development and tissue differentiation. This powerful, yet relatively simple, technique shows that specific rearrangements of both microtubular (MT) and actin microfilament (MF) arrays occur in cells as they leave the meristem and traverse the transitional region interpolated between meristem and elongation region. Cytoskeletal and growth analyses have identified the transition zone as critical for both cell and root development; it is in this zone that cell growth is channelled, by the cytoskeleton, into a strictly polarized mode which enables root tips to extend rapidly through the soil in search of water and nutrients. An integrated cytoskeletal network is crucial for both the cytomorphogenesis of individual cells and the overall morphogenesis of the plant body. The latter process can be viewed as a reflection of the tight control which cytoskeletal networks exert not only over cell division planes in the cells within meristematic apices but also over the orientation of cell growth in the meristem and elsewhere. Endoplasmic MTs interconnecting the plasma membrane with the nucleus are suggested to be involved in cell division control; they may also act as a two-way cytoskeletal communication channel for signals passing to and fro between the extracellular environment and the genome. Moreover, the dynamism of endoplasmic MTs exerts direct effects on chromatin structure and the accompanying nuclear architecture and hence can help exert a cellular level of control over cell growth and cell cycle progression. Because the inherent dynamic instability of MTs depends on the concentration of tubulin dimers within the cytoplasm, we propose that when asymmetric cell division occurs, it will result in two daughter cells which differ in the turnover rates of their MTs. This phenomenon could be responsible for different cell fates of daughter plant cells produced by such cell divisions.     

A comparison of minirhizotron techniques for estimating root length density in soils of different bulk densities

Flexible- and rigid-walled minirhizotron techniques were compared for estimating root length density of 14- to 28-day-old Pinto bean (Phaseolus vulgaris L.) and spring whet (Triticum aestivum L.) plants in soil boxes under controlled environment conditions at three soil bulk densities (1.3, 1.5 and 1.7 g cm^–3). The flexible-tube system consisted of bicycle inner tubes inflated inside augered access holes and removed only when measurements were taken. Rigid tubes were constructed of extruded polybutyrate plastic. In both cases tubes were oriented horizontally. Despite similar root densities for wheat and beans based on measurements obtained from soil cores, root densities estimated from both types of minirhizotron were higher in bean than in wheat in uncompacted soil. Estimates of root density by the flexible tube minirhizotron were more closely correlated with soil core image analysis estimates than were those by the rigid minirhizotron system. At high soil bulk density, rigid tube measurements consistently overestimated actual rooting density of both wheat and bean. The relationship between estimated and actual rooting densities in the case of flexible tube measurements was not significantly influenced by soil bulk density. These findings were consistent with the theory that preferential root growth is induced by gaps at the soil-observation tube interface, inherent in the rigid tube technique, and was accentuated under conditions of high soil strength.