Clonal integration in Fragaria chiloensis differs between populations: ramets from grassland are selfish

In plants, only species with clonal growth are able to directly transfer resources between otherwise independent units of the same genetic individual. A simple conceptual model of plant performance as a function of internal resource supply and environmental resource availability suggests that resource sharing between ramets within clones is likely to be disadvantageous in uniform habitats and advantageous in patchy ones. It was therefore hypothesized that clones in populations from relatively uniform habitats will have been selected for low rates of resource sharing between ramets compared to clones in populations from patchier habitats. In coastal northern California, the clonal herb Fragaria chiloensis is common both in grasslands, where resources are relatively uniform, and on sand dunes, where resources are more patchy. It was predicted that clones from a grassland population of Fragaria would have “selfish” ramets with low rates of resource sharing compared to clones from an adjacent dune population. Ramets were subjected to contrasting light levels with and without connection between ramets. Patterns of biomass accumulation were consistent with the prediction. This appears to be the first report of genetically based variation in patterns of resource sharing in clonal plants. It supports the idea that these patterns are locally selected to increase plant performance in habitats with different patterns of resource availability. Received: 19 August 1998 / Accepted: 4 March 1999     

Clonal integration beyond resource sharing: implications for defence signalling and disease transmission in clonal plant networks

Resource sharing between ramets of clonal plants is a well-known phenomenon, which allows stoloniferous and rhizomatous species to internally translocate water, mineral nutrients and carbohydrates from sites of high supply to sites of high demand. The mechanisms and implications of resource integration in clonal plants have extensively been studied in the past. Vascular ramet connections are likely to provide an excellent means to share substances other than resources, such as systemic defence signals and pathogens. The aim of this paper is to propose the idea that physical ramet connections of clonal plants can be used (1) to transmit signals, which enable members of clonal plant networks to share information about their biotic and abiotic environments, and (2) to facilitate the internal distribution of systemic pathogens in clonal plant networks and populations. We will focus on possible mechanisms as well as on potential ecological and evolutionary implications of clonal integration beyond resource sharing. More specifically, we will explore the role of physiological integration in clonal plant networks for the systemic transmission of direct and indirect defence signals after localized herbivore attack. We propose that sharing defence induction signals among ramets may be the basis for an efficient early warning system, and it may allow for effective indirect defence signalling to herbivore enemies through a systemic release of volatiles from entire clonal fragments. In addition, we will examine the role of clonal integration for the internal spread of systemic pathogens and pathogen defence signals within clonal plants. Clonal plants may use developmental mechanisms such as increased flowering and clone fragmentation, but also specific biochemical defence strategies to fight pathogens. We propose that clonal plant networks can act as stores and vectors of diseases in plant populations and communities and that clonal life histories favour the evolution of pathogens with a low virulence.     

Phosphorus transformations from rock phosphates in acid soils and measures for increasing their efficiency for growing rice (Oryza sativa L.)

Summary Laboratory incubation experiments showed that addition of rock phosphate to P-deficient acid red and laterite soils resulted in an increase in Al–P or/and Fe–P, with a consequent decrease in Ca–P during 15 days, of moist aerobic incubation. The transformations of P from Gafsa, Jordan, North Carolina and Florida rock phosphates were more than those from Tennessee, Missouri and Udaipur. Studies with North Carolina, Gafsa, and Udaipur rock phosphates showed that application of the former two to moist aerobic P-deficient acid soils 2 weeks prior to flooding and transplanting rice gave higher content of Al–P, Fe–P and Bray-P, compared to when these were applied at flooding. The grain yields obtained with the former two treatments were also at par with that obtained with the addition of superphosphate at comparable rate (100 ppm) of P application, compared to when the, rock phosphates were applied at flooding, where the grain yields were lower than the superphosphate treatment, indicating that some of these rock phosphates could be made as efficient as superphosphate for growing rice on acid soils by their application to moist aerobic soil, 2–3 weeks prior to flooding and transplanting rice and thus conserve some amount of sulphur required for the manufacture of water soluble phosphates.     

Recovery of mitosporic fungi actively growing in soils after bacterial bioremediation of oily sludge and their potential for removing recalcitrant hydrocarbons

Bacterial bioremediation is a widely used technique to remove or neutralize contaminants. However, the enzymatic capabilities of bacteria are limited and, consequently, recalcitrant compounds remain in the soil. Fungi can help to overcome this drawback, since their enzymatic repertoire is extensive. In this study, the diversity of viable, actively growing, filamentous fungi was explored in soils previously subjected to bioremediation with bacterial consortia from three petroleum exploitation fields. Diversity was estimated using both morphological traits and ITS rDNA sequencing. We recovered a highly diverse group of morphotypes from each field, most of them previously reported genera of fungi associated with bioremediation (Aspergillus, Paecilomyces, and Penicillium), but a high proportion (40%) of the fungal species detected have never previously been reported as being involved in degradation of hydrocarbons. To build evidence of the isolates as potential bioremediation agents, their laccase and peroxidase activities were measured in vitro; peroxidase activity was a common trend in these fungi. The detection of peroxidase activity suggests adaptation of these fungi to the residual contaminants after bacterial action. Bioaugmentation of the fungal isolates in microcosms contaminated with oily sludge resulted in higher removal of the asphaltenic fraction compared to no bioaugmented microcosms. Our method allowed us to screen for and isolate viable mycelia within a contaminated environment, a strategy efficient for our environmental protection goals.     

Thermophilic methanogenic Archaea in compost material: occurrence, persistence and possible mechanisms for their distribution to other environments

Since compost is widely used as soil amendment and the fact that during the processing of compost material high amounts of microorganisms are released into the air, we investigated whether compost may act as a carrier for thermophilic methanogens to temperate soils.

All eight investigated compost materials showed a clear methane production potential between 0.01 and 0.98 μmol CH₄ g dw⁻¹ h⁻¹ at 50 °C. Single strand conformation polymorphism (SSCP) and cloning analysis indicated the presence of Methanosarcina thermophila, Methanoculleus thermophilus, and Methanobacterium formicicum.

Bioaerosols collected during the turning of a compost pile showed both a highly similar SSCP profile compared to the corresponding compost material and clear methane production during anoxic incubation in selective medium at 50 °C. Both observations indicated a considerable release of thermophilic methanogens into the air.

To analyse the persistence of compost-borne thermophilic methanogens in temperate oxic soils, we therefore studied their potential activity in compost and compost/soil mixtures, which was brought to a meadow soil, as well as in an agricultural soil fertilised with compost. After 24 h anoxic incubation at 50 °C, all samples containing compost showed a clear methanogenic activity, even 1 year after application.

In combination with the in vitro observed resilience of the compost-borne methanogens against desiccation and UV radiation we assume that compost material acts as an effective carrier for the distribution of thermophilic methanogens by fertilisation and wind.     

Professional chronic radiation exposure: prospects for studying mutagenic effects in generations using the Southern Ural DNA bank of irradiated people and their offspring

Data on the established DNA Bank were summarized. The DNA Bank included workers of the Mayak nuclear facility in the Southern Ural, who were exposed to chronic radiation predominantly from external gamma-rays in different doses, and their families for the future study on radiation mutations in somatic cells of parents and possible transmission of genome instability through the germline. At present the DNA Bank contains genetic material from 1500 individuals, among whom there are 223 families.     

pH, abscisic acid and the integration of metabolism in plants under stressed and non-stressed conditions: cellular responses to stress and their implication for plant water relations

A paradigm for the response of plants to stress is presented which suggests that plants move towards a state of minimal metabolic activity as a stress intensifies and remain in that state until that stress is relieved. The paradigm is based on the proposition that cells that interface with the transpiration stream employ variations on the following theme to move towards that state. Tension on the apoplastic water opens a mechanosensitive Ca2+ channel, a response that is augmented by apoplastic ABA. The resulting elevated cytoplasmic Ca2+ deactivates a plasmalemma H+/ATPase and also activates a K(+)-H+ symport. The inflow of K+ and H+ depolarizes the membrane and renders the apoplast less acidic, the protons being removed to the vacuole and the K+ ions being re-exported via the K+ outward rectifying channel. The onset of darkness in guard and mesophyll cells deactivates the plasmalemma H+/ATPase and then the events outlined above ensue except that these cells do not appear to utilize either Ca2+ or ABA during these changes. In stressed cells it is proposed that elevated cytoplasmic Ca2+ activates the release of an ABA precursor from a stored form. ABA is then released in the apoplast after export of the precursor if the activity of the K(+)-H+ symport has brought the apoplastic pH close to 7.0. It is proposed that aquaporins in the xylem parenchyma and mesophyll cells are opened by elevated cytoplasmic Ca2+ when the water potential of the transpiration stream is high so that water can be stored in the 'xylem parenchyma reservoir'. The water in this reservoir is then used to increase the water potential in the transpiration stream when the water column is under tension and to help repair embolisms by a mechanism that resembles stomatal closure.