Relationships among Eucheuma denticulatum,Eucheuma isiforme and Kappaphycus alvarezii (Gigartinales,Rhodophyta) based on nuclear ssu-rRNA gene sequences

The nuclear genes encoding small-subunit ribosomal RNAs (ssu-rDNAs) of the carrageenophytes Eucheuma denticulatum, E. isiforme and Kappaphycus alvarezii were amplified by the polymerase chain reaction, cloned and sequenced. The sequences range from 1767 (K. alvarezii) to 1781 (E. isiforme) nucleotides in length, and have guanine+cytosine contents between 51.2% (E. isiforme) and 51.5% (E. denticulatum). Pairwise sequence identities among these sequences ranged from 97.6% to 98.5%, levels comparable to some intergeneric identities within Gracilariales. In phylogenetic analyses, the two Eucheuma ssu-rDNAs group stably together vis-a-vis the ssu-rDNA of K. alvarezii, and these three ssu-rDNAs form a monophyletic group within a larger grouping of other carrageenophytes. The results demonstrate quantitatively that analysis of nuclear-encoded ssu-rDNA sequences is likely to be useful in resolving taxonomic, phylogenetic and biogeographic questions among tribe Eucheumatoideae Doty.     

Effects of fosmidomycin on plant photosynthesis as measured by gas exchange and chlorophyll fluorescence

In higher plants, many isoprenoids are synthesised via the chloroplastic 1-deoxy-d-xylulose 5-phosphate/2-C-methyl-d-erythritol 4-phosphate (MEP) pathway. Attempts to elucidate the function of individual isoprenoids have used the antibiotic/herbicidal compound fosmidomycin (3-[N-formyl-N-hydroxy amino] propyl phosphonic acid) to inhibit this pathway. Examination of the effect of fosmidomycin on the major components of photosynthesis in leaves of white poplar (Populus alba) and tobacco (Nicotiana tabacum) was made. Fosmidomycin reduced net photosynthesis in both species within 1 h of application, but only when photosynthesis was light-saturated. In P. alba, these reductions were confounded by high light and fosmidomycin inducing stomatal patchiness. In tobacco, this was caused by significant reductions in PSII chlorophyll fluorescence and reductions in V _cmax and J _max. Our data indicate that the diminution of photosynthesis is likely a complex effect resulting from the inhibition of multiple MEP pathway products, resulting in photoinhibition and photo-damage. These effects should be accounted for in experimental design and analysis when using fosmidomycin to avoid misinterpretation of results as measured by gas exchange and chlorophyll fluorescence.     

Occasional pathogenic bacteria promoting ice-ice disease in the carrageenan-producing red algae Kappaphycus alvarezii and Eucheuma denticulatum (Solieriaceae,Gigartinales, Rhodophyta)

The bacterial isolates from normal and diseased branches of Kappaphycus alvarezii and Eucheuma denticulatum in the Philippines were examined for possible role in the development of the ice-ice disease. The numbers of bacteria on and in ice-iced branches were 10–100 times greater than those from normal, healthy ones. Gram-positive bacteria predominated in almost all branch sources, but with an increasing proportion of agar-lysing bacteria in branches suffering from the ice-ice disease. These agar-lysing bacteria were composed of yellow and non-pigmented, spreading colonies identified to the Cytophaga-Flavobacterium complex and the Vibrio group. Among isolates which mainly appeared on ice-iced branches, two strains, designated as P11 (Vibrio sp.) and P25 (Cytophage sp.), which showed pathogenic activity, were obtained. These strains caused early ice-ice whitening of K. alvarezii especially when subjecting branches to environmental stress, such as reduced salinity and light intensity, suggesting that these bacteria were occasionally pathogenic. This paper offers new evidence of bacterial role in the development of so-called ice-ice disease among farmed species of Kappaphycus.     

Laboratory-induced development of the ice-ice disease of the farmed red algae Kappaphycus alvarezii and Eucheuma denticulatum (Solieriaceae,Gigartinales, Rhodophyta)

The most common perception of unfavorable environmental factors causing the ice-ice disease in the farmed seaweeds, Kappaphycus and Eucheuma, was demonstrated in this study for the first time using stressful conditions of abiotic factors in a continuous culture system. Light intensity of less than 50 mol photon m^–2 s^–1 and salinity of 20% or less induced ice-ice whitening characterized by short segments at midbranches which were similar to those observed in the Philippine seaweed farms, while temperatures of up to 33–35 °C resulted in wide-scale whitening leading to complete damage of the branches. These effects were preceded by slow growth rates from an optimum of 3.7% d^–1 to almost –2.0% d^–1. Mechanical stress by wound injury did not result to ice-ice whitening similar to the above. Environmental factors observed to trigger ice-ice in the laboratory, although may not necessarily parallel those in the field, may act synergestically to produce similar effects.     

Growth rates of Eucheuma denticulatum (Burman) Collins et Harvey and Kappaphycus striatum (Schmitz) Doty under different conditions in warm waters of Southern Japan

Green and brown strains of Eucheuma denticulatum and new cultivated strain Kappaphycus striatum were collected from commercial cultivation ground in Philippines. Daily growth rates (DGR) of the materials were measured under different temperatures and photon fluence in laboratory controlled conditions and at different depths in the sea using the floating raft culture method in Uranochi Inlet, Tosa Bay, Southern Japan. The highest DGR of E. denticulatum (brown strain) (2.76% ±0.64) and K. striatum (green strain) (4.5% ±1.51) were recorded at 25°C. K. striatum (both strains) had the highest DGR and grew over a wide range of temperatures. Observation on the effect of photon fluence showed that K. striatum (brown strain) grew well (DGR = 5.16%±1.3) at 145 μmol photon m^-2 s^-1.In the floating raft cultivation, K. striatum (green strain) had a DGR of3.1% ± 0.93 higher than E. denticulatum (brown strain)(2.73% ± 0.43). This revised version was published online in August 2006 with corrections to the Cover Date.     

Effect of salt stress on photosynthesis and chlorophyll fluorescence in Medicago truncatula

In the present study, photosynthetic parameters including gas exchanges, pigment contents, and chlorophyll fluorescence, were compared in two contrasting local Medicago truncatula lines TN6.18 and TN8.20, in response to salt added to the nutrient solution. Plants were cultivated under symbiotic nitrogen fixation (SNF) after inoculation with a reference strain Sinorhizobium meliloti 2011, a very tolerant strain to salinity (700 mM NaCl), and grown in a controlled glasshouse. On one month old plants (with active SNF), salt treatment (75 mM NaCl) was gradually applied. Photosynthesis, assimilating pigments and chlorophyll fluorescence were monitored throughout the experiment during both short and long terms, compared to control (non-saline) conditions. A genotypic variation in salt tolerance was found; TN6.18 was the more sensitive to salinity. The relative tolerance of TN8.20 was concomitant with the highest photochemical quenching coefficient (q_P) affecting the maximum quantum yield of PSII (Y); the real quantum yield (?_exc) was the most affected in the sensitive line. Moreover, stomatal and PSII reaction centers activities differed clearly between the studied lines. We found that the effect of salinity on photosynthesis of M. truncatula was related to PSII activity reduction rather than to stomatal conductance limitation. Photosynthesis was reduced by the inhibition of CO₂ assimilation caused by PSII damage. This was clearly estimated by the Y, ?_exc and especially by the quantum yield of electron transport of PSII (Φ_PSII). Thus, on the basis of our results on the two local M. truncatula lines, we recommend the use of chlorophyll fluorescence as non-destructive screening method to discriminate susceptible and resistant legumes to salt stress.     

Effect of light and temperature on biomass, photosynthesis and capsular polysaccharides in cultured phototrophic biofilms

Phototrophic biofilms seem to be suitable candidates for tertiary wastewater treatment due to their high uptake capacity for nutrients and other pollutants, also taking into account the time and cost savings derived from easy procedures for biomass harvesting. Biomass accrual, structure, and physiology of biofilms affect the efficiency of nutrient removal by its microbial community. Here, we construct a biofilm consisting of a cyanobacterium Synechocystis sp. and the green alga Chlorococcum sp. and determine the effect of combined variations of irradiance and temperature on the biofilm structure and function. The two species were isolated from phototrophic biofilms naturally developing in an Italian wastewater treatment plant and grown in a microcosm designed for biofilm investigations. Phototrophic biomass accumulation, percent species composition, photosynthetic response and the amount and composition of capsular polysaccharides (CPS), including anionic residues, are reported. The results showed that biofilm development required relatively moderate irradiances (60 μmol photons m⁻² s⁻¹) below which development was arrested. Both light and temperature had a strong effect on the composition of each species to the biofilm. The CPS compositions also changed with temperature, light and species composition. The CPS of the green-algal-dominated biofilm had the higher uronic acid content indicating a potential to exploit green algae in the treatment of waste contaminated with heavy metals. Given the knowledge of the response of certain species to light and temperature combinations, it may be possible to construct biofilms of known species and CPS composition to use them for specific applications.     

Regulation of photosynthesis during heterocyst differentiation in Anabaena sp. strain PCC 7120 investigated in vivo at single-cell level by chlorophyll fluorescence kinetic microscopy

Changes of photosynthetic activity in vivo of individual heterocysts and vegetative cells in the diazotrophic cyanobacterium Anabaena sp. strain PCC 7120 during the course of diazotrophic acclimation were determined using fluorescence kinetic microscopy (FKM). Distinct phases of stress and acclimation following nitrogen step-down were observed. The first was a period of perception, in which the cells used their internally stored nitrogen without detectable loss of PS II activity or pigments. In the second, the stress phase of nitrogen limitation, the cell differentiation occurred and an abrupt decline of fluorescence yield was observed. This decline in fluorescence was not paralleled by a corresponding decline in photosynthetic pigment content and PS II activity. Both maximal quantum yield and sustained electron flow were not altered in vegetative cells, only in the forming heterocysts. The third, acclimation phase started first in the differentiating heterocysts with a recovery of PS II photochemical yields $F_{\text{v}} /F_{\text{m}} ,\;F^{\prime}_{\text{v}} /F^{\prime}_{\text{m}}.$ F v / F m , F v ′ / F m ′ . Afterwards, the onset of nitrogenase activity was observed, followed by the restoration of antenna pigments in the vegetative cells, but not in the heterocysts. Surprisingly, mature heterocysts were found to have an intact PS II as judged by photochemical yields, but a strongly reduced PS II-associated antenna as judged by decreased F ₀. The possible importance of the functional PS II in heterocysts is discussed. Also, the FKM approach allowed to follow in vivo and evaluate the heterogeneity in photosynthetic performance among individual vegetative cells as well as heterocysts in the course of diazotrophic acclimation. Some cells along the filament (so-called “superbright cells”) were observed to display transiently increased fluorescence yield, which apparently proceeded by apoptosis.     

高温胁迫对水稻剑叶光合和叶绿素荧光特征的影响

采用盆栽方法在人工气候箱内对超级杂交稻组合"天优998"4个生育期(抽穗期、乳熟期、蜡熟期和完熟期)分别进行5个高温处理(最高温度分别设定为32、35、38、40和42℃,日较差为6℃,每个处理为期5d,每天2h,以自然条件下生长的水稻为对照),研究了高温胁迫对水稻剑叶光合和荧光特征的影响。结果表明:高温对水稻剑叶光合和荧光特征具有显著影响,而且因高温处理、生育期、参数的不同而有差异,温度越高影响越大;高温处理后水稻剑叶叶绿素含量(SPAD)、净光合速率(Pn)、气孔导度(Gs)下降,胞间CO2浓度(Ci)上升;光化学效率(Fv/Fm)、实际量子产量(ΦPSII)、表观电子传递速率(ETR)、光化学猝灭系数(qP)、PSⅡ光化学反应(P)下降,初始荧光(Fo)、非光化学猝灭系数(qN)、其他热耗散(E)上升;当最高温度大于35℃时,4个生育期的光合和荧光指标大多发生了显著变化,当最高温度大于38℃时,则大幅下降;抽穗期和乳熟期Pn、Gs下降显著、Ci上升显著,蜡熟期和完熟期SPAD下降显著,但高温下抽穗期、乳熟期水稻剑叶Fv/Fm的下降幅度和Fo的上升幅度比蜡熟期、完熟期大;高温胁迫对水稻剑叶Pn的影响比SPAD大,抽穗和乳熟期水稻剑叶Pn下降主要是由气孔因素引起,而蜡熟期和完熟期剑叶Pn的下降则主要是由非气孔因素所致。     

Destructive hydrogen peroxide production in Eucheuma denticulatum (Rhodophyta) during stress caused by elevated pH,high light intensities and competition with other species

Growth of Eucheuma denticulatum was studied in the field and in laboratory experiments. Field co-cultivation of E. denticulatum with the green alga Ulva reticulata or the seagrass Thalassia sp. reduced daily growth rate (DGR) of a Tanzanian and a Philippine strain of E. denticulatum by 10–100% and 10–55%, respectively, depending upon the type of water current: a unidirectional water current produced the best growth. Laboratory co-cultivation of a Tanzanian strain of E. denticulatum with U. reticulata also reduced DGR (to 8% of the control) and nitrate-nitrogen uptake rate (to <30% of the control) of E. denticulatum and, moreover, it increased epiphytism of a red filamentous alga on E. denticulatum. E. denticulatum monoculture at pH 8·6 ± 0·5 or at photosynthetic photon flux densities (PPFDs) higher than its growth optimum (350 ± 50 μmol photons m^-2 s^-1) also increased epiphytism. The lack of a competitive mechanism for inorganic carbon uptake in Eucheuma may have contributed to its reduced growth during co-cultivation. During co-cultivation, elevated pH regimes (pH > 8·5) were created around the Eucheuma thalli as a result of photosynthesis, thus decreasing the concentration of CO₂ in the seawater to values around 1 μmM. As Eucheuma depends mainly on the CO₂ in the seawater for its growth, a higher pH can cause CO₂ limitation by decreasing CO₂ concentration. Hydrogen peroxide (H₂O₂) production from the Tanzanian strain was also determined by luminol-dependent chemiluminescence. H₂O₂ production was found to increase with increased pH and PPFD (probably as a result of oxidative stress). Preincubation of plants with catalase for 5 min before addition of luminol prevented chemiluminescence, confirming H₂O₂ as the substrate of the luminol reaction. We suggest that the inefficiency of E. denticulatum in HCO^- ₃ utilisation contributes to its poor growth during field coexistence with seagrasses or Ulva sp. and that carbon deficiency induces H₂O₂ production in E. denticulatum.     

Kappaphycus malesianus sp. nov.: a new species of Kappaphycus (Gigartinales,Rhodophyta) from Southeast Asia

A new species, Kappaphycus malesianus, is established as a new member of the genus Kappaphycus. Locally known as the “Aring-aring” variety by farmers in Malaysia and the Philippines, this variety has been commercially cultivated, often together with Kappaphycus alvarezii due to the similarities in morphology. Despite also producing kappa-carrageenan, the lower biomass of the K. malesianus when mixed with K. alvarezii ultimately affects the carrageenan yield. Morphological observations, on both wild and cultivated plants, coupled with molecular data have shown K. malesianus to be genetically distinct from its Kappaphycus congeners. The present study describes the morphology and anatomy of this new species as supported by DNA data, with additional morphological features for distinguishing between commercial Kappaphycus cultivars.     

Photoinhibition of photosynthesis in Lemna gibba as induced by the interaction between light and temperature. III. Chlorophyll fluorescence at 77 K

Photoinhibition in Lemna gibba L. was studied by interpreting chlorophyll fluorescence characteristics at 77 K on the basis of the bipartite model of Butler and co-workers (Butler 1978). Application of this analysis to chloroplasts (isolated from plants before and after exposure to a photosynthetic photon flux density of 1 750 μmol m⁻² s⁻¹ at 3°C for 2 h) revealed that photoinhibition had the following effect on primary events in photosynthesis. Firstly, the fluorescence of PS II increased (44%) in the state of open traps (F_o) and decreased (32%) in the state of closed traps (F_m). It is suggested, that the F_o-decrease reflects increased quenching by radiationless decay, both effects occurring at PS II reaction centers. Secondly, the rate constant for transfer of excitation energy from PS II to PS I (k_T(μ→J)) increased by 34%. However, in the state of closed traps, the flux of excitation energy via this transfer process decreased, most likely because of increased quenching by radiationless decay at PS II reaction centers. Thirdly, the probability for fluorescence from PS I decreased (19%). This indicates increased quenching by radiationless decay.     

Phylogenetic relationship of Kappaphycus Doty and Eucheuma J. Agardh (Solieriaceae, Rhodophyta) in Malaysia

The genera Kappaphycus Doty and Eucheuma J. Agardh are important sources of carrageenan in Malaysia, offering lucrative revenues to the carrageenan industry, economy, and the local community. The extensive range of morphotypes and the lack of distinct morphological characteristics led to the application of molecular systematics in elucidating this taxonomic confusion. Local varieties of Kappaphycus and Eucheuma, identified using putative external morphology, were analyzed using the mitochondrial cox2–3 spacer and plastid RuBisCO spacer molecular markers. Phylogenetic analysis of these and non-local specimens indicate that Kappaphycus and Eucheuma are genetically distinct. Three main genotypes of Kappaphycus alvarezii were identified, of which two are extant in Hawaii. Morphological and color variations are not supported by molecular data, indicating that most of the local names are not genetically based. Both the cox2–3 spacer and RuBisCO spacer generated phylogenetic trees with similar topology except in variation of nodal supports. The two markers showed clear separation between Kappaphycus and Eucheuma and the existence of three Malaysian Kappaphycus cultivars. Cox2–3 spacer data is more variable and provides better resolution than the RuBisCO spacer, showing that Kappaphycus is more diversified with a larger number of genotypes, strains, and species which are unique to Southeast Asia. Kappaphycus sp. “Aring-aring” appeared to be phenotypically and genotypically different from other Kappaphycus congeners, whereas Kappaphycus striatum exhibited two different genotypes. Our data indicate that Eucheuma denticulatum is the dominant species in Malaysian waters and also suggested paraphyly in Eucheuma which will require further studies. The application of molecular taxonomy on Malaysian Kappaphycus and Eucheuma proves useful, offering valuable insights into the taxonomy and distribution of these commercially important Rhodophytes.     

Effect of day/night temperature difference on chlorophyll content,photosynthesis and fluorescence parameters of tomato at fruit stage

In order to investigate the effect of day/night temperature difference (DIF) on photosynthetic characteristics of tomato plants (Solanum lycopersicum, cv. Jinguan 5) at fruit stage, an experiment was carried out in climate chambers. Five day/night temperature regimes (16/34, 19/31, 25/25, 31/19, and 34/16°C) with respective DIFs of -18, -12, 0, +12, and +18 were used and measured at mean daily temperature of 25°C. The results showed that chlorophyll (Chl) a, Chl b, net photosynthetic rate (P_N), stomatal conductance (g_s), maximum quantum yield of PSII photochemistry (F_v/F_m), effective quantum yield of PSII photochemistry (?_PSII), and photochemical quenching (qp) significantly increased under positive DIF, while they decreased with negative DIF. In contrast, the Chl a/b ratio and nonphotochemical quenching (NPQ) decreased under positive DIF, while increased with negative DIF. Chl a, Chl b, P_N, g_s, F_v/F_m, ?_PSII, and qp were larger under +12 DIF than those at +18 DIF, while Chl a/b and NPQ showed an opposite trend.     

Genetic diversity of Kappaphycus Doty and Eucheuma J. Agardh (Solieriaceae,Rhodophyta) in Southeast Asia

The commercial importance of carrageenophytes Kappaphycus and Eucheuma is well known, with much interest in terms of cultivation, marketing, and research. Considering the many lucrative prospects, these red seaweeds were introduced into various parts of the world for farming, where merely a few were comprehensively documented. Despite being extensively cultivated throughout Southeast Asia, the genetic diversity of Kappaphycus and Eucheuma is poorly studied, where heavy reliance is placed on the use of local or commercial names for identifications. This study used the mitochondrial-encoded cox1 and cox2–3 spacer genetic markers to investigate the Kappaphycus and Eucheuma haplotypes, cultivated and wild, available throughout Southeast Asia. Concatenated cox1–cox2–3 spacer datasets were also analyzed. The near full-length cox1 gene is preferred at revealing the genetic diversity of Kappaphycus and Eucheuma, provided a larger reference database is available. Both molecular markers were capable of delineating common members of the genus Kappaphycus (i.e., Kappaphycus alvarezii, Kappaphycus striatus, and Kappaphycus cottonii) and Eucheuma denticulatum, and revealed interesting genotypes and new species which may be potential alternatives to the common cultivars as well as materials for research. The relative scarcity of Eucheuma species is discussed and future sites for sampling are recommended.     

Studies on the adaptation of intact leaves to changing light intensities by a kinetic analysis of chlorophyll fluorescence and oxygen evolution as measured by the photoacoustic signal

A detailed quantitative study of the kinetics of photochemical and non-photochemical quenching was achieved by a linear analysis of the yields of chlorophyll fluorescence and of oxygen evolution (as measured by the photoacoustic effect) by their responses to sinusoidal changes of actinic light. The results of this analysis were given in terms of the parameters of the kinetic phases obtained as a response to a step function change in the light intensity from a previous steady-state. Thus, it was possible to split the responses to a change in light intensity into six components which could be assigned to 6 time-constants (60 ms, 1.8 s, 2.5 s, 8 s, 150 s and 400 s). The comparison of the kinetics of responses induced by blue-light (approx. 400–500 nm) and by far-red (720 nm) light led to the assignment of the 1.8-s time-constant to the loading and discharge of the plastoquinone pool and of the 400-s time-constant to the state-transition controller which could be shown to be involved also in the adaptation to changes in light intensity and not only to changes in light quality (wavelength). The time-constant of 8 s, also occurring in 532-nm light-scattering was assigned to the high-energy state quenching (q_E) of fluorescence. q_E was paralleled by a decrease of the photoacoustic signal, demonstrating an high-energy state quenching of oxygen evolution as well. The 60-ms time-constant is suggested to be related to the redox state of the primary quinone acceptor of PS II, whereas the other two time-constants could not be identified. The calculation of the relative contributions of the photo-chemical and of the non-photochemical quenching in the individual components revealed that both quenching-mechanisms occur in all components except in the assumed fastest one.Abbreviations pa-signal photoacoustic signal - PS photosystem     

The ratio of variable to maximum chlorophyll fluorescence from photosystem II,measured in leaves at ambient temperature and at 77K,as an indicator of the photon yield of photosynthesis

The response of a number of species to high light levels was examined to determine whether chlorophyll fluorescence from photosystem (PS) II measured at ambient temperature could be used quantitatively to estimate the photon yield of O₂ evolution. In many species, the ratio of the yield of the variable (F_V) and the maximum chlorophyll fluorescence (F_M) determined from leaves at ambient temperature matched that from leaves frozen to 77K when reductions in F_V/F_M and the photon yield resulted from exposure of leaves to high light levels under favorable temperatures and water status. Under conditions which were less favorable for photosynthesis, F_V/F_M at ambient temperature often matched the photon yield more closely than F_V/F_M measured at 77K. Exposure of leaves to high light levels in combination with water stress or chilling stress resulted in much greater reductions in the photon yield than in F_V/F_M (at both ambient temperature and 77K) measured in darkness, which would be expected if the site of inhibition was beyond PSII. Following chilling stress, F_V/F_M determined during measurement of the photon yield in the light was depressed to a degree more similar to that of the depression of photon yield, presumably as a result of regulation of PSII in response to greatly reduced electron flow.Abbreviations and Symbols F_o yield of instantaneous fluorescence - F_M yield of maximum fluorescence - F_V yield of variable fluorescence - PFD photon flux density (400–700 nm) - PSI (II) photosystem I (II) This work was supported by the Deutsche Forschungsgemeinchaft. W.W.A. gratefully acknowledges the support of Fellowships from the North Atlantic Treaty Organization and the Alexander von Humboldt-Stiftung. We also thank Maria Lesch for plant maintenance.