Time Dynamics of Ethnic Assortativeness in Tsivil'sk Raion of Chuvashia

Based on marriage records for 1950–1959, 1970–1979, and 1990–1999, ethnic assortativeness of Chuvash and Russian inhabitants of Tsivil'sk raion of the Chuvash Republic was calculated. It was shown that in half a century ethnic assortativeness of Chuvashes did not change (1.18, 1.15, and 1.15), while in Russians a clear downward trend was observed (4.20, 2.18, and 1.28). The data on ethnic assortativeness obtained were compared with those for the same populations from other regions of the Chuvashia examined earlier.     

Ethnic marriage assortativeness and intensity of metisation of Karachays

On the basis of 11280 marriage records of four regions of Karachay-Cherkessia (Karachaevsky, Malokarachaevsky, Ust-Dzhegutinsky, Prikubansky, 193.2 thousand people in total) for 1990–2000, the intensity of Karachay cross-breeding was determined, amounting to 11.7%. Comparison of the intensity of Karachay cross-breeding with that for some other ethnoses is carried out. The ethnic assortativness H is approximately one. The population is characterized a preference for monoethnic marriages. The endogamy index in the studied regions varies from 0.29 to 0.53; after the exclusion from the analysis of repatriates, it increases to 0.34–0.63. The values of local inbreeding in an interval are 0.0001–0.0004, and no differences in terms of isolation by distance are revealed among the regions (0.001). The average square migration is 40–60 km.

     

Temporal bird community dynamics are strongly affected by landscape fragmentation in a Central American tropical forest region

Habitat loss and fragmentation are considered the main causes of species extinctions, particularly in tropical ecosystems. The objective of this work was to evaluate the temporal dynamics of tropical bird communities in landscapes with different levels of fragmentation in eastern Guatemala. We evaluated five bird community dynamic parameters for forest specialists and generalists: (1) species extinction, (2) species turnover, (3) number of colonizing species, (4) relative species richness, and (5) a homogeneity index. For each of 24 landscapes, community dynamic parameters were estimated from bird point count data, for the 1998–1999 and 2008–2009 periods, accounting for species’ detection probability. Forest specialists had higher extinction rates and a smaller number of colonizing species in landscapes with higher fragmentation, thus having lower species richness in both time periods. Alternatively, forest generalists elicited a completely different pattern, showing a curvilinear association to forest fragmentation for most parameters. Thus, greater community dynamism for forest generalists was shown in landscapes with intermediate levels of fragmentation. Our study supports general theory regarding the expected negative effects of habitat loss and fragmentation on the temporal dynamics of biotic communities, particularly for forest specialists, providing strong evidence from understudied tropical bird communities.     

Genetic Epidemiological Study of Three District Populations in Chuvashia

Comprehensive population genetic and medical genetic studies were performed in three raions (districts) of Chuvashia. The population of these districts is more than 90% Chuvash. About 70% of the families that completed reproduction had two or three children. The proportion of families with four or more children was 18%. The duration of generation was 27.6 years. The differential fertility and differential mortality indices in the Chuvash population were estimated at 0.33 and 0.076, respectively. The total index of differential selection was 0.403, which is typical of modern urbanized populations. Mean values of local inbreeding calculated from Malecot's model of isolation by distance were 0.00124 and 0.00377 for the urban and rural populations, respectively, of the districts studied. The prevalence rates of autosomal dominant (AD), autosomal recessive (AR), and X-linked diseases were found to be 0.47, 0.52, and 0.35 per 1000, respectively, in the urban population and 1.62, 1.14, and 0.31 per 1000, respectively, in the rural population. Significant correlation between the local inbreeding and prevalence rates of AD and AR diseases was found. A total of 43 AD and 43 AR diseases were identified. Some of them were not found in previous studies on other populations.     

Polymorphism of the Y-chromosome diallelic loci in the ethnic populations of the Altai-Sayan region

Using the data on five biallellic Y-chromosome loci (DYS199, 92R7, SRY1532, RBF5 and DYS287) polymorphism, genetic structures of the five Turkic-speaking ethnic groups of the Altai-Sayan highland (Tuvinians, Sojots, Shorians, Khakassians, and Southern Altaians (Altai-Kizhi), were described. The gene pools of the populations examined were characterized by the presence of pronounced paleo-Caucasoid component (92R7-T-lineages). The frequency of this component increased westward, reaching more than 70% in Shorians and Southern Altaians. Haplotype TAT-C (RBF5 locus) was observed in all populations, except Shorians, with the frequencies varying from 5.4% in Altai-Kizhi to 18.8% in Khakassians. The Alu-insertion in the DYS287 locus was revealed only in the Altaian sample with the frequency of 3.3%. It was established that the Altai-Sayan populations studied split into two statistically significantly different groups. One of the groups was represented by Tuvinians, Sojots, and Khakassians, while another one was comprised of Shorians and Altaians.     

Temporal fatty acid dynamics of the octocoral Veretillum cynomorium

The objectives of the present work were to investigate the temporal variation in the fatty acid (FA) composition of the octocoral Veretillum cynomorium, examine the effects of reproduction and environmental factors on FA variation, and establish a chemotaxonomic identification for this species. Mean oocyte size-frequency distributions showed that the majority of the oocytes had an intermediate size (Group II) before spawning (April and June). The late-vitellogenic oocytes (Group III) became absent in August and October and, during this post-spawning period, oocytes were primarily of small size (Group I). Most of the major FA, 16:0, 18:0, 20:4n-6, 20:5n-3, and the tetracosapolyenoic fatty acid (TPA), 24:6n-3, varied significantly throughout the year (p < 0.01), with two peaks in August/October and February. The boost in early oogenesis, also associated with warmer temperatures, seemed to be responsible for the observed increase in FA content between June and August. The highest values of FA content were observed in February when intermediate oogenesis (Group II) was at its peak and there were considerable levels of available food in the environment. Also, the increase in food availability seemed to trigger the final stages of gametogenesis. The high quantity of 18:1n-7, odd-numbered and branched FAs, suggested the presence of a dynamic bacterial community in V. cynomorium, probably as an adaptive response to the lack of symbiotic microalgae. Although the presence of TPAs is the main feature distinguishing octocorals from other coral species, here we showed that there was no single FA clearly dominating the FA composition of V. cynomorium throughout the year. Instead, four main FAs share similar concentrations: 16:0, 20:4n-6, 20:5n-3 and 24:6n-3. The predominance of these four FAs combined with the higher amount of 24:6n-3 when compared to 24:5n-6 may serve as a chemotaxonomic feature to distinguish this octocoral species (or genus).     

Temporal dynamics of bacterial aging and rejuvenation

Single-celled organisms dividing by binary fission were thought not to age [1-4]. A 2005 study by Stewart et al. [5] reversed the dogma by demonstrating that Escherichia coli were susceptible to aging. A follow-up study by Wang et al. [6] countered those results by demonstrating that E. coli cells trapped in microfluidic devices are able to sustain robust growth without aging. The present study reanalyzed these conflicting data by applying a population genetic model for aging in bacteria [7]. Our reanalysis showed that in E. coli, as predicted by the model, (1) aging and rejuvenation occurred simultaneously in a population; (2) lineages receiving sequentially the maternal old pole converged to a stable attractor state; (3) lineages receiving sequentially the maternal new pole converged to an equivalent but separate attractor state; (4) cells at the old pole attractor had a longer doubling time than ones at the new pole attractor; and (5) the robust growth state identified by Wang et al. corresponds to our predicted attractor for lineages harboring the maternal old pole. Thus, the previous data, rather than opposing each other, together provide strong evidence for bacterial aging.     

Temporal dynamics of carbon partitioning and rhizodeposition in wheat

The temporal dynamics of partitioning and rhizodeposition of recent photosynthate in wheat (Triticum aestivum) roots were quantified in situ in solution culture. After a 30-min pulse of (14)CO(2) to a single intact leaf, (14)C activities of individual carbon fluxes in the root, including exudation, respiration, and root content, were measured continuously over the next 20 h concurrently with (14)C efflux from the leaf. Immediately after the end of the (14)CO(2) pulse, (14)C activity was detected in the root, the hydroponic solution, and in root respiration. The rate of (14)C exudation from the root was maximal after 2 to 3 h, and declined to one-third of maximum after a further 5 h. Completion of the rapid phase of (14)C efflux from the leaf coincided with peak (14)C exudation rate. Thus, exudation flux is much more rapidly and dynamically coupled to current photosynthesis than has been appreciated. Careful cross-calibration of (14)C counting methods allowed a dynamic (14)C budget to be constructed for the root. Cumulative (14)C exudation after 20 h was around 3% of (14)C fixed in photosynthesis. Partitioning of photosynthate between shoot and root was manipulated by partial defoliation before applying the (14)CO(2) pulse to the remaining intact leaf. Although the rate of photosynthesis was largely unaffected by partial defoliation, the proportion of new photosynthate subsequently partitioned to and exuded from the root was substantially reduced. This clearly indicates that exudation depends more on the rate of carbon import into the root than on the rate of photosynthesis.     

Temporal dynamics of mating and predation in mosquito swarms

We determined the numbers of copulations and predatory attacks in swarms ofAnopheles freeborni (Diptera: Culicidae), and the distribution of these events throughout the duration of the swarming period each day. On 19 evenings of observation, we recorded 2724 copulating pairs leaving swarms and 1351 dragonfly (Pantala hymenaea andErythemis collocata) attacks. Mating activity partially coincided with predator activity. Most copulations occurred between 10 and 20 min after the swarms formed, while predation events were most frequent during the initial 15 min of the swarm. We calculated the ratio of copulations to predatory attacks during the swarming period. This ratio was significantly higher in an area sheltered by trees than it was in the open. We suggest that physiological and ecological constraints other than predation operate on the mating system of this anopheline to affect the timing of swarm initiation and swarm site selection.     

Temporal changes in greenspace in a highly urbanized region

The majority of the world's population now lives in towns and cities, and urban areas are expanding faster than any other land-use type. In response to this phenomenon, two opposing arguments have emerged: whether cities should 'sprawl' into the wider countryside, or 'densify' through the development of existing urban greenspace. However, these greenspaces are increasingly recognized as being central to the amelioration of urban living conditions, supporting biodiversity conservation and ecosystem service provision. Taking the highly urbanized region of England as a case study, we use data from a variety of sources to investigate the impact of national-level planning policy on temporal patterns in the extent of greenspace in cities. Between 1991 and 2006, greenspace showed a net increase in all but one of 13 cities. However, the majority of this gain occurred prior to 2001, and greenspace has subsequently declined in nine cities. Such a dramatic shift in land use coincides with policy reforms in 2000, which favoured densification. Here, we illustrate the dynamic and policy-responsive nature of urban land use, thereby highlighting the need for a detailed investigation of the trade-offs associated with different mechanisms of urban densification to optimize and secure the diverse benefits associated with greenspaces.     

Genetic epidemiological study of populations in three regions of Chuvashia Republic

Comprehensive population genetic and medical genetic studies were performed in three raions (districts) of Chuvashia. The population of these districts is more than 90% Chuvash. About 70% of the families that completed reproduction had two or three children. The proportion of families with four or more children was 18%. The duration of generation was 27.6 years. The differential fertility and differential mortality indices in the Chuvash population were estimated at 0.33 and 0.076, respectively. The total index of differential selection was 0.403, which is typical of modern urbanized populations. Mean values of local inbreeding calculated from Malecot's model of isolation by distance were 0.00124 and 0.00377 for the urban and rural populations, respectively, of the districts studied. The prevalence rates of autosomal dominant (AD), autosomal recessive (AR), and X-linked diseases were found to be 0.47, 0.52, and 0.35 per 1000, respectively, in the urban population and 1.62, 1.14, and 0.31 per 1000, respectively, in the rural population. Significant correlation between the local inbreeding and prevalence rates of AD and AR diseases was found. A total of 43 AD and 43 AR diseases were identified. Some of them were not found in previous studies on other populations.     

Diversity of mitochondrial DNA haplotypes in ethnic populations of the Volga-Ural region of Russia

The mtDNA polymorphism was analyzed in eight ethnic groups (N = 979) of the Volga-Ural region. Most mtDNA variants belonged to haplogroups H, U, T, J, W, I, R, and N1 characteristic of West Eurasian populations. The most frequent were haplogroups H (12-42%) and U (18-44%). East Eurasian mtDNA types (A, B, Y, F, M, N9) were also observed. Genetic diversity was higher in Turkic than in Finno-Ugric populations. The frequency of mtDNA types characteristic of Siberian and Central Asian populations substantially increased in the ethnic groups living closer to the Urals, a boundary between Europe and Asia. Geographic distances, rather than linguistic barriers, were assumed to play the major role in distribution of mtDNA types in the Volga-Ural region. Thus, as concerns the maternal lineage, the Finno-Ugric populations of the region proved to be more similar to their Turkic neighbors rather than to linguistically related Balto-Finnish ethnic groups.     

Temporal dynamics of host-marking in the tropical tephritid fly, Anastrepha ludens

Abstract. The temporal dynamics of host-marking behaviour in the tropical tephritid fly, Anastrepha ludens (Loew), is described and used to formulate a model of control of marking behaviour. The following temporal patterns in host-marking behaviour were observed. Time spent marking increased as Aludens females deposited clutches in a given fruit previously marked zero, one, two or three times. This trend was paralleled by an increase in the number of pauses in marking behaviour within the host-marking bout (and hence an increase in the number of sub-bouts separated by such pauses). Finally, within any given marking bout, the length of a sub-bout diminished progressively. The length of a pause, by contrast, showed no significant trend. Based on these results, we propose that host-marking pheromone, or HMP, while deterrent to females prior to egg-laying, actually stimulates continued host-marking behaviour after egg-laying. We argue that host-marking is regulated by sensory adaptation or habituation to HMP in conjunction with a dosage-dependent restoration of inhibition of the motor pattern. Functional aspects of this pattern of motor control are discussed.     

Population Genetic Study of the Alatyr' Raion of the Republic of Chuvashia

Population genetic characteristics were estimated in the Alatyr' raion (administrative district) of the Republic of Chuvashia, which has long been populated by three ethnic groups. The ethnic assortativeness values in the town of Alatyr' and the rural area of the district were 1.17 and 1.21, respectively, for Russians; 1.14 and 4.82, respectively, for Chuvashes; and 1.33 and 2.45, respectively, for Mordovians. Wright's statistics were as follows: F_st = 0.00358, F_it = 0.00178, and F_is = 0.00134. The migration indices were 0.0264 for Alatyr' and 0.0178 for the district. The endogamy indices for the total and the Russian populations of Alatyr' were 0.47 and 0.53, respectively. The parameters of isolation by distance were a = 0.000189 and b = 0.009591 for the urban and a = 0.000318 and b = 0.00919 for the rural area. Schemes of the genetic landscape were constructed. The influence of the polyethnic composition on the genetic structure of the population is discussed.     

Temporal plankton dynamics in an oligotrophic maritime Antarctic lake

• 1 The population density, diversity and productivity of the microbial plankton in an oligotrophic maritime Antarctic lake were studied for a 15‐month period between December 1994 and February 1996.
• 2 In the lake, concentrations of nutrients and dissolved organic carbon were uniformly low, temperature varied over a small annual range of 0.1–3 °C, and the surface was ice‐covered except during a period of approximately 6 weeks in summer.
• 3 The total of 57 morphotypes of protozoa observed during the study is a higher taxonomic diversity than previously reported from continental Antarctic lakes, but lower than that found in more eutrophic maritime Antarctic lakes. Likewise, planktonic abundance and productivity were lower than has been reported in other lakes on Signy Island, but generally higher than those of lakes on the Antarctic continent.
• 4 There were marked seasonal and interannual variations in planktonic population density.
• 5 Chlorophyll a concentrations ranged from undetectable to 4.2 µg L^‐1 and the greatest rate of primary productivity measured was 4.5 mg C m^‐3 h^‐1. The phytoplankton was dominated by small chlorophytes and chrysophytes, with phototrophic nanoflagellate abundance ranging from 1.1 × 10³ to 1.2 × 10⁷ L^‐1.
• 6 Bacterial densities of 3.6 × 10⁸ to 1.9 × 10¹⁰ L^‐1 were recorded and bacterial productivity reached a peak of 0.36 µg C L^‐1 h^‐1. Numbers of heterotrophic nanoflagellates between 5.0 × 10⁴ and 1.8 × 10⁷ L^‐1, and of ciliates from undetectable to 1.1 × 10⁴ L^‐1 were observed. Naked amoebae were usually rare, but occasionally reached peaks of up to 1.5 × 10³ L^‐1.

     

Temporal variation in habitat structure and shrubsteppe bird dynamics

Summary We investigate the role of temporal variation in habitat physiognomy in influencing the dynamics of shrubsteppe bird populations and communities. During a 3-y (1977–1979) study of 14 sites in the northern Great Basin of North America, annual precipitation varied substantially, with one of the driest years on record followed by one of the wettest. This resulted in significant physiognomic variation (increasing height and coverage of vegetation, decreasing horizontal patchiness), mediated largely by changes in the annual elements of the flora, particularly forbs and grasses. Shrub species coverage values, on the other hand, demonstrated no statistically detectable year-to-year changes, nor were they correlated with any physiognomic variation. Despite large scale physiognomic changes, no bird species' abundance varied in a statistically significant fashion; neither could variation in bird abundances be correlated with variation in either physiognomy or shrub species coverages.Multivariate analyses revealed essentially the same patterns as the univariate analyses: substantial changes in physiognomy, few changes in shrub species coverages or bird species abundances, and little correlation of temporal variation among the three data sets. Calculation of the Euclidean distances that sites moved in multivariate physiognomic, bird species, or shrub species hyperspaces yields synthetic gradients of annual turnover of sites with respect to those data sets. Sites identified as demonstrating high physiognomic turnover were characterized by high coverage of grass and forbs, while low turnover sites had greater coverage of shrubs and higher shrub species diversity. Relatively high bird turnover sites had greater numbers of Western Meadowlarks and Black-throated Sparrows, while more stable sites had high numbers of Brewer's Sparrows. Physiognomically, high bird turnover sites were grassier and had greater total vegetation coverage, while low bird turnover sites had more bare ground and higher horizontal patchiness. A site's position on the avifauna turnover axis, however, was uncorrelated with its position on the physiognomic turnover axis. Shrub species showed virtually no annual turnover.Reanalysis of a previous Principal Components Analysis (PCA) of these same data sets that was applied without regard to year of sampling revealed that the first physiognomic component (41% of the total physiognomic variability) did in fact have a strong temporal element, and that this element was consistent with the changes in univariate characters noted above. No other physiognomic component could be associated with annual variation, nor could any components of parallel bird abundance or shrub species coverage PCA's.Regional patterns indicate that sites tended to be very consistent from year to year in their relationships to one another as defined by their relative locations in either physiognomic or shrub species hyperspaces, but varied independently of one another with respect to their bird species abundances and composition. Examination of the temporal consistency of site relationships between bird space and vegetation space reveals that bird communities are to a large degree independent of a site's physiognomic position, but instead are strongly associated with its position in shrub species hyperspace.The overall patterns that emerge from these analyses are consistent with the so-called checkerboard effect that results from the apparently random annual redistribution of individual birds, and leads to the conclusion that populations of shrubsteppe birds are not existing at maximum density or carrying capacity. Such observations are consistent with contentions that these populations lack close biological coupling with coexisting species and that interactions among these species (e.g. competition) are likely to play little if any role in the organization of their communities.     

Temporal and spatial dynamics in a northern tallgrass prairie

It is well established that plants and soil properties are interdependent. What is less known is the degree to which the distribution of plant and soil properties, in both space and time, match one another. We assessed plant community and soil conditions in permanent sample plots in a tallgrass prairie community from 2002 to 2008. Redundancy analysis showed that the dominant grass species were associated with changes in elevation, soil pH, and gravimetric water content, but not nitrogen or phosphate. Indicator species analysis suggested the community is best described by four cluster types, with half of the plots changing community type over the 6-year sampling period. These cluster types were generally spatially aggregated, with semivariograms showing a range from 80 to 346 m. This degree of spatial structuring was observed in the elevation and soil water content data, but not in measures of soil inorganic N or P. This suggests that natural plant communities do not necessarily show a strong correspondence to all soil variables, especially those that vary rapidly in time and space. The dynamic nature of vegetation patch distribution, combined with their size, may contribute to the loss of species from small tallgrass prairie reserves.     

安徽汉族群体mtDNA高变区I序列多态性分析

以Anderson标准序列作为对照,用GeneDOC软件确定42个安徽汉族无关个体的mtDNA高变区I序列在线粒体基因组中的位置,通过序列比对软件clustalX分析安徽汉族群体mt DNA高变区I序列多态性,共检测到38种单倍型和57个变异位点.在mtDNA高变区I序列中14个bp的高变结构域中,安徽汉人16183位点变异率高达38%,在16187位点的变异率为4.8%.同时发现,安徽汉人与成都汉人在mtDNA高变区I 16183和16189位点的变异率接近,明显高于广东汉人.     

Different matrilineal contributions to genetic structure of ethnic groups in the silk road region in china

Previous studies have shown that there were extensive genetic admixtures in the Silk Road region. In the present study, we analyzed 252 mtDNAs of five ethnic groups (Uygur, Uzbek, Kazak, Mongolian, and Hui) from Xinjiang Province, China (through which the Silk Road once ran) together with some reported data from the adjacent regions in Central Asia. In a simple way, we classified the mtDNAs into different haplogroups (monophyletic clades in the rooted mtDNA tree) according to the available phylogenetic information and compared their frequencies to show the differences among the matrilineal genetic structures of these populations with different demographic histories. With the exception of eight unassigned M*, N*, and R* mtDNAs, all the mtDNA types identified here belonged to defined subhaplogroups of haplogroups M and N (including R) and consisted of subsets of both the eastern and western Eurasian pools, thus providing direct evidence supporting the suggestion that Central Asia is the location of genetic admixture of the East and the West. Although our samples were from the same geographic location, a decreasing tendency of the western Eurasian-specific haplogroup frequency was observed, with the highest frequency present in Uygur (42.6%) and Uzbek (41.4%) samples, followed by Kazak (30.2%), Mongolian (14.3%), and Hui (6.7%). No western Eurasian type was found in Han Chinese samples from the same place. The frequencies of the eastern Eurasian-specific haplogroups also varied in these samples. Combined with the historical records, ethno-origin, migratory history, and marriage customs might play different roles in shaping the matrilineal genetic structure of different ethnic populations residing in this region.