Estimating wild boar (Sus scrofa) abundance and density using capture–resights in Canton of Geneva, Switzerland

We estimated wild boar abundance and density using capture–resight methods in the western part of the Canton of Geneva (Switzerland) in the early summer from 2004 to 2006. Ear-tag numbers and transmitter frequencies enabled us to identify individuals during each of the counting sessions. We used resights generated by self-triggered camera traps as recaptures. Program Noremark provided Minta–Mangel and Bowden’s estimators to assess the size of the marked population. The minimum numbers of wild boars belonging to the unmarked population (juveniles and/or piglets) were added to the respective estimates to assess total population size. Over the 3 years, both estimators showed a stable population with a slight diminishing tendency. We used mean home range size determined by telemetry to assess the sampled areas and densities. Mean wild boar population densities calculated were 10.6 individuals/km² ± 0.8 standard deviation (SD) and 10.0 ind/km² ± 0.6 SD with both estimators, respectively, and are among the highest reported from Western Europe. Because of the low proportion of marked animals and, to a lesser extent, of technical failures, our estimates showed poor precision, although they displayed similar population trends compared to the culling bag statistics. Reported densities were consistent with the ecological conditions of the study area.     

Paternity assessment in free-ranging wild boar (Sus scrofa) – Are littermates full-sibs?

Multiple paternity within litters occurs in various groups of mammals exhibiting different mating systems. Using seven genetic markers (i.e., microsatellites), we investigated the paternity of littermates in free-ranging wild boar (Sus scrofa) in a Mediterranean habitat. Using the software CERVUS 2.0 we estimated the probability of detecting multiple paternity across all loci (D), the probability of paternity (W) and a statistic Δ that allows the assignment of paternity to the most likely male with strict and relaxed levels of confidence. Multiple paternity was inferred for one of the nine analysed litters at the 80% confidence level. This suggests that a single male may control the access to receptive adult females and it shows that multiple paternity is not very common in the studied free-ranging wild boar population. Despite the possible occurrence of sperm competition and/or female cryptic choice, mate guarding seems to play a significant role in sexual selection. To better understand the wild boar's mating strategies further studies analysing the reproductive success of both sexes and under different environmental conditions should be conducted.     

Do intensive drive hunts affect wild boar (Sus scrofa) spatial behaviour in Italy? Some evidences and management implications

Wild boar have been increasing in numbers all over Western Europe in the last 30 years. The species is a major pest for agriculture, but it has a high value as a game species, and in Italy, as in several other countries, it is traditionally hunted in drive hunts by hunting teams with several dogs. This hunting method can have disruptive effects on the demography and spatial behaviour of wild boar, especially family groups. We conducted a 2-year study (2003 and 2004) to determine the effects of drive hunt disturbance on the spatial behaviour of wild boar family groups in the Northern Apennines (central Italy). Twenty wild boar belonging to ten family groups were ear tagged with a radio device. We located resting sites daily and used intensive tracking sessions during drive hunts. Three seasons were determined: pre-hunting, hunting and post-hunting. A general pattern of increased spatial instability during the hunting season was shown. Resting ranges were larger, and resting sites were more interspersed. Distances between consecutive resting sites were greater during the hunting season and, especially, on hunting days. The displacement of family groups caused by drive hunts was generally short lived except for those groups that were repeatedly hunted and so abandoned their pre-hunt (native) range. During drive hunts, wild boar showed a moderate tolerance to hunting disturbance, and only family groups which were directly chased by dogs escaped or altered their behaviour. The response of wild boar to hunting disturbance seemed to be highly related to the degree of hunting pressure combined with individual variability. The impact on wild boar behaviour should be reduced, above all by avoiding repeated hunts in the same areas within a short period and by employing well-trained hounds.     

Use of ¹⁸F-fluorodeoxyglucose positron emission tomography-computed tomography in a miniature pig (Sus scrofa domestica) with pneumonia

A 1-y-old male miniature pig housed in our laboratory facility was evaluated for weight loss and rough coat condition. CBC results revealed neutrophilia. Radiography of the thoracic area showed increased opacity throughout the thoracic cavity except for the right caudal lobe. 1?F-labeled fluorodeoxyglucose positron emission tomography-computed tomography (FDG-PET-CT) revealed elevated standard uptake values in the area corresponding to the radiologic findings. Follow-up thoracic radiography taken 2 wk after FDG-PET-CT showed several interval changes, including markedly decreased opacity throughout the entire thoracic cavity. Necropsy revealed adhesions between the upper portion of the caudal lobe of the left lung and thoracic wall. ELISA for several closely related infectious species confirmed the presence of antibody to Actinobacillus pleuropneumoniae serovar V.     

Gene expression changes in spleens of the wildlife reservoir species, Eurasian wild boar （Sus scrofa）, naturally infected with Brucella suis biovar 2

Brucella suis is responsible for swine brucellosis worldwide.Of the five different 8.suis biovars (bv.), bv.2 appears restricted to Europe where it is frequently isolated from wild boar and hares, can infect pigs and can cause human brucellosis.In this study, the differ-ential gene expression profile was characterized in spleens of Eurasian wild boar naturally infected with B.suis by.2.Of the 20,201 genes analyzed in the microarray, 633 and 1,373 were significantly (fold change＞1.8; P＜0.01) upregulated and downregulated, respectively,in infected wild boar.The analysis was focused on genes that were over represented after conditional test for biological process gene on-tology.Upregulated genes suggested that B.suis bv.2 infection induced cell maturation, migration and/or proliferation in infected animals.The genes downregulated in infected wild boar impaired the activity of several important cellular metabolic pathways such as metabolism,cytoskeleton organization and biogenesis, immune response and lysosomal function and vesicle-mediated transport.In addition, the re-sponse to stress, sperm fertility, muscle development and apoptosis seemed to be also impaired in infected animals.These results sug-gested that B.suis by.2 may use strategies similar to other smooth brucellae to facilitate intraeellular multiplication and the developmentof chronic infections.To our knowledge, this is the first report of the analysis of gene expression profile in hosts infected with B.suis by.2, which is important to understand the molecular mechanisms at the host-pathogen interface in the main reservoir species with possible implications in the zoonotic cycle of the pathogen.     

A comparison of four different fine root production estimates with ecosystem carbon balance data in a Fagus–Quercus mixed forest

The controversy on how to measure fine root production of forests (P) most accurately continues. We applied four different approaches to determine annual rates of P in an old-growth temperate Fagus sylvatica–Quercus petraea stand: sequential soil coring with minimum–maximum calculation, sequential coring with compartmental flow calculation, the ingrowth core method, and a recently developed root chamber method for measuring the growth of individual fine roots in situ. The results of the four destructive approaches differed by an order of magnitude and, thus, are likely to introduce large errors in estimating P. The highest annual rates of P were obtained from the sequential coring approach with compartmental flow calculation, intermediate rates by sequential coring with minimum–maximum calculation, and low ones by both the root growth chamber and ingrowth core approaches. A carbon budget for the stand was set up based on a model of annual net carbon gain by the canopy and measurements on carbon sink strength (annual leaf, branch and stem growth). The budget implied that a maximum of 27% of the net carbon gain was available for allocation to fine root growth. When compared to the carbon budget data, the sequential coring/compartmental flow approach overestimated annual fine root production substantially; whereas the ingrowth core and root growth chamber approaches grossly underestimated P rates. With an overestimation of about 25% the sequential coring/minimum–maximum approach demonstrated the best agreement with the carbon budget data. It is concluded that the most reliable estimate of P in this temperate forest will be obtained by applying the sequential coring/minimum–maximum approach, conducted with a large number of replicate samples taken on a few dates per season, in conjunction with direct root growth observation by minirhizotrons.     

Sources of variability in spotted owl population growth rate: testing predictions using long-term mark–recapture data

For long-lived iteroparous vertebrates that annually produce few young, life history theory predicts that reproductive output (R) and juvenile survival should influence temporal variation in population growth rate (λ) more than adult survival does. We examined this general prediction using 15 years of mark–recapture data from a population of California spotted owls (Strix occidentalis occidentalis). We found that survival of individuals ≥1 year old (ϕ) exhibited much less temporal variability , where CV is coefficient of variation, than R and that R was strongly influenced by environmental stochasticity. Although λ was most sensitive ( ; log-transformed sensitivity) to ϕ and much less sensitive to either R or juvenile survival (survival rate of owls from fledging to 1 year old; ), we estimated that R contributed as much as ϕ to the observed annual variability in λ. The contribution of juvenile survival to variability in λ was proportional to its These results are consistent with the hypothesis that natural selection may have favored the evolution of longevity in spotted owls as a strategy to increase the probability of experiencing favorable years for reproduction. Our finding that annual weather patterns that most affected R (temperature and precipitation during incubation) and ϕ (conditions during winter related to the Southern Oscillation Index) were equally good at explaining temporal variability in λ supports the conclusion that R and ϕ were equally responsible for variability in λ. Although currently accepted conservation measures for spotted owl populations attempt to enhance survival, our results indicated that conservation measures that target R may be as successful, as long as actions do not reduce ϕ.     

Multiple paternity in a wild population of Armadillidium vulgare: influence of infection with Wolbachia?

Female multiple mating has been extensively studied to understand how nonobvious benefits, generally thought to be of genetic nature, could overcome heavy costs such as an increased risk of infection during mating. However, the impact of infection itself on multiple mating has rarely been addressed. The interaction between the bacterium Wolbachia and its terrestrial crustacean host, Armadillidium vulgare, is a relevant model to investigate this question. In this association, Wolbachia is able to turn genetic males into functional females (i.e. feminization), thereby distorting the sex ratio and decreasing the number of available males at the population scale. Moreover, in A. vulgare, females have been shown to mate multiply under laboratory conditions and males prefer uninfected females over infected ones. Additionally, different Wolbachia strains are known to infect A. vulgare and these strains differ in their transmission rate and virulence. All these elements suggest a potential impact of different Wolbachia strains on multiple mating. To investigate this assumption, we collected gravid females in a wild A. vulgare population harbouring both uninfected females and females infected with one of two different Wolbachia strains (wVulM and wVulC) and performed paternity analyses on the obtained broods using microsatellite markers. We demonstrate that (i) multiple paternity is common in this wild population of A. vulgare, with a mean number of fathers of 4.48 ± 1.24 per brood and (ii) females infected with wVulC produced broods with a lower multiple paternity level compared with females infected with wVulM and uninfected ones. This work improves our knowledge of the impact of infections on reproductive strategies.     

Tree population changes in a tropical dry evergreen forest of south India over a decade (1992–2002)

Changes in species composition and density of trees >10 cm gbh in a tropical dry evergreen forest in Puthupet, south India are interpreted for the period between 1992 and 2002. A 1-ha plot was inventoried in 1992 and was recensused in 2002. During the 10-year interval tree taxa diversity as well as stand density increased, but the basal area value decreased. Tree species richness increased by 21% (from 24 to 29 species) by an addition of eight species and local extinction of three species. The tree density increased just by eight individuals (from 1330 stems ha⁻¹ in 1992 to 1338 ha⁻¹ in 2002), but the basal area decreased by 8% (from 37.5 to 34.5 m² ha⁻¹). Many species (11 numbers) have increased in abundance rather than decreased. Many surviving species seem to have considerable stability in abundance at the local scale. The density of smaller stems (10 29 cm gbh) increased by 15.3%, while that of the larger trees decreased drastically (81.6%). Ninety percent of the missing stems were from the middlestorey of the forest. Tree density changes among the three ecological guilds revealed a decrease in stem density and an increase in basal area in the lowerstorey; while the middlestorey exhibited a reverse trend. Family-wise, tree density changes revealed that the majority of families (67%) showed an increase in stem density. Long-term studies on tree population changes are essential to estimate tree mortality and recruitment rates, which will provide a greater insight in tropical forest dynamics.     

Density of tiger and leopard in a tropical deciduous forest of Mudumalai Tiger Reserve,southern India,as estimated using photographic capture–recapture sampling

Density of tiger Panthera tigris and leopard Panthera pardus was estimated using photographic capture–recapture sampling in a tropical deciduous forest of Mudumalai Tiger Reserve, southern India, from November 2008 to February 2009. A total of 2,000 camera trap nights for 100 days yielded 19 tigers and 29 leopards within an intensive sampling area of 107 km². Population size of tiger from closed population estimator model M_b Zippin was 19 tigers (SE = ±0.9) and for leopards M_h Jackknife estimated 53 (SE = ±11) individuals. Spatially explicit maximum likelihood and Bayesian model estimates were 8.31 (SE = ±2.73) and 8.9 (SE = ±2.56) per 100 km² for tigers and 13.17 (SE = ±3.15) and 13.01 (SE = ±2.31) per 100 km² for leopards, respectively. Tiger density for MMDM models ranged from 6.07 (SE = ±1.74) to 9.72 (SE = ±2.94) per 100 km² and leopard density ranged from 13.41 (SE = ±2.67) to 28.91 (SE = ±7.22) per 100 km². Spatially explicit models were more appropriate as they handle information at capture locations in a more specific manner than some generalizations assumed in the classical approach. Results revealed high density of tiger and leopard in Mudumalai which is unusual for other high density tiger areas. The tiger population in Mudumalai is a part of the largest population at present in India and a source for the surrounding Reserved Forest.     

Evolution of birth intervals in a french rural population (1840–1950)

This study presents the first results concerning the evolution of the birth intervals since 1840 among a rural population of the centre of France, where birth control appeared as far back as the end of the 18th Century. We observe the absence of variation of the average interval between successive briths in relation to the period of marriage, family size and socio-economic status of spouses. This confirms that child spacing does not play a part in the constitution of family. The average intervals between marriage and first birth are associated with most of the variables, essentially due to the marrying age and to a lesser extent to the family size. This rural population, in spite of a modern profile by the widespread practice of birth control, still presents traditional attitudes in the structure of its fertility as is indicated by the absence of birth spreading and the important part which seems to be played by the marriage age of women.     

Phylogeography of Liquidambar styraciflua (Altingiaceae) in Mesoamerica: survivors of a Neogene widespread temperate forest (or cloud forest) in North America?

We investigate the genetic variation between populations of the American sweetgum (Liquidambar styraciflua), a tree species with a disjunct distribution between northeastern Texas and Mexico, by analyzing sequences of two chloroplast DNA plastid regions in Mesoamerica. Our results revealed phylogeographical structure, with private haplotypes distributed in unique environmental space at either side of the Trans‐Mexican Volcanic Belt, and a split in the absence of gene flow dating back ca. 4.2–1.4 million years ago (MYA). Species distribution modeling results fit a model of refugia along the Gulf and Atlantic coasts but the present ranges of US and Mesoamerican populations persisted disjunct during glacial/interglacial cycles. Divergence between the US and Mesoamerican (ca. 8.4–2.8 MYA) populations of L. styraciflua and asymmetrical gene flow patterns support the hypothesis of a long‐distance dispersal during the Pliocene, with fragmentation since the most recent glacial advance (120,000 years BP) according to coalescent simulations and high effective migration rates from Mesoamerica to the USA and close to zero in the opposite direction. Our findings implicate the Trans‐Mexican Volcanic Belt as a porous barrier driving genetic divergence of L. styraciflua, corresponding with environmental niche differences, during the Pliocene to Quaternary volcanic arc episode 3.6 MYA, and a Mesoamerican origin of populations in the USA.     

Mixed infection, Trichinella spiralis and Trichinella britovi, in a wild boar hunted in the Province of Cáceres (Spain)

The etiological agents of human trichinellosis are distributed worldwide in domestic and wild animals. In Spain, two morphologically indistinguishable Trichinella species have been described—Trichinella spiralis and Trichinella britovi—that are perpetuated in both domestic and sylvatic cycles. The present work reports a double natural infection involving these species in a wild boar killed by hunters in the Province of Cáceres, Spain. After artificial digestion of the boar’s muscles, nine larvae/g were collected. These were characterized by multiplex-PCR and Western-blotting using the Trichinella-specific monoclonal antibodies US5 and US9, and both T. spiralis and T. britovi were detected. The mechanism by which this wild boar came to acquire a mixed infection remains unclear.     

Are degraded habitats from agricultural crops associated with elevated faecal glucocorticoids in a wild population of common vole (Microtus arvalis)?

The severe impact of agriculture on species’ abundance and diversity is widely recognized. However, its effects on the physiology of wild animal populations are poorly known. We analyzed faecal glucocorticoids levels in wild common voles (Microtus arvalis) living in a farmland landscape to test whether living in degraded habitats, such as crops, is correlated with increased glucocorticoids. Other factors such as sex, reproductive status, and population density were also considered. We captured voles with Sherman traps in crops and in their field margins which were comprised of semi-natural vegetation. We collected fresh faecal samples from captured individuals and quantified their levels of faecal corticosterone metabolites (FCM) in the laboratory. The quantification of FCM concentrations was performed by competitive enzyme immunoassay. Individuals captured within the crops had higher levels of FCM than those in field margins; females and breeding individuals exhibited higher FCM levels. In addition, FCM concentrations positively correlated with abundance of voles. Our results suggest that degraded habitats in agricultural landscapes are associated with increased glucocorticoid levels on common voles likely caused by a higher disturbance from agricultural practices and a lesser vegetation cover in crops compared with field margins.     

Mortality patterns over 3 years in a sparse population of wild rabbits (Oryctolagus cuniculus) in New Zealand, with an emphasis on rabbit haemorrhagic disease (RHD)

A sparse rabbit population in New Zealand was monitored over 3 years to assess the temporal dynamics of rabbit mortality, in particular to understand the mortality patterns due to rabbit haemorrhagic disease (RHD). A total of 107 deaths were recorded, of which 93 could be classified by cause. The predominant cause of mortality was predation (47% of deaths), followed by RHD (20%). Deaths due to RHD were clustered in time (within 3 weeks), predation occurred most actively from late autumn to spring, while other causes of death did not show pronounced seasonal peaks. No differences in cause-specific death risk were observed between sexes. Predation was the main cause of death in younger animals, while RHD mortality occurred mainly in older rabbits. This study has shown that the impact of RHD can vary considerably between years, indicating that a variety of risk factors are required to initiate a RHD epidemic with a high mortality rate among rabbits.     

Litter in a first–order stream of a temperate deciduous forest (Margaraça Forest, central Portugal)

To evaluate the importance and fate of organic matter inputs in forested streams, we determined the litterfall inputs and the benthic coarse particulate organic matter (CPOM) in one headwater stream flowing through a mixed deciduous forest, during one year. Both vertical traps and the stream bottom were sampled monthly. The material collected was sorted into four main categories: leaves, fruits and flowers, twigs and debris. Litter production was 715 g m−2 y−1 and seasonal, with 73% of the annual total during October–December (autumn). Leaves comprised the largest litter component. Benthic organic matter was 1880 g m−2 y−1, and was also seasonal. Highest accumulation was attained in spring, and twigs and branches comprised the major component. This revised version was published online in July 2006 with corrections to the Cover Date.     

Fishing through time: population dynamics of plaice (Pleuronectes platessa) in the Kattegat–Skagerrak over a century

Over the past century, advances in technology and historical events such as climate change have resulted in significant changes in the exploitation pattern, population sizes and the potential yield of fish stocks. These variations provide contrast in the data that improves our knowledge on population dynamics and our ability to develop management strategies for long-term sustainable exploitation. In this study, we use a standardized scientific trawl survey to obtain a historical time series (1901–2007) of relative abundance, recruitment and size structure for plaice in the Kattegat–Skagerrak. Our work extends the available time series by more than 80 years so that the evaluation of trends is more informative than is possible from the current assessment. We show that the current adult biomass is approximately 40% of the maximum observed at the beginning of the century and during the 1960s. The average maximum individual length has been reduced by 10 cm over the studied time period. An analysis of trends in mean length indicates that fishing mortality was variable during the first half of the century and has increased steadily over the past 20 years. Recruitment has been the highest on record during recent years, suggesting that the alleged link between coastal environmental degradation and juvenile survival is of low importance. The overall findings of our work will provide managers with a historical perspective on the population dynamics of the stock, which will support the long-term management of plaice in the Kattegat–Skagerrak.     

Phytosociological investigations of a Pinus pinea L. forest in the Eastern Mediterranean Region (K. Maraş – Turkey)

In this study the phytosociological structures of Pinuspinea L. forests occuring in K. Mara province in theeastern-mediterranean region have been investigated. The vegetation of theresearch area has been studied according to the Braun-Blanquet (1932) methodanda Gastridio ventricosi-Pinetum pineaeassociation has been recognised.     

True water constraint under a rainfall interception experiment in a Mediterranean shrubland (Northern Tunisia): confronting discrete measurements with a plant–soil water budget model

Increased drought length and intensity is expected in the Mediterranean basin under anthropogenic increase in atmospheric CO₂, leading to extreme events not yet encountered in the present climate variability. Understanding ecosystems responses and capturing peculiar ecophysiological processes related to these events have been investigated in the field by rainfall manipulation experiments. Quantifying the actual drought faced by the ecosystem under control and dry plots, or among experiments remain a key challenge for explaining functional impacts on plant growth. Full-profile soil water content can be tricky to assess in rocky soils, and time-consuming plant water potential measurements remain a discrete information unable to capture short rainfall pulses. We propose here to fully investigate the water budget of a total rainfall interception manipulation on a Mediterranean shrubland, coupled with a plant–soil water balance model. We could accurately simulate the seasonal course of plant water status, including small rainfall pulses. We then derived yearly estimates of water stress integral for each water treatment, leading to an estimate of 66–86 % increase of drought intensity for the dry treatment compared to the control. Comparing actual and expected plant water budget from simulations in the dry plots allowed to identify and quantify the impact of methodological issues related to rainfall interception experiments as side effects for intrusive rain drops and subsurface lateral water flow.