Purification and properties of phosphorylase from white yam tuber (Dioscorea rotundata)

α-Glucan phosphorylase was extracted fromDioscorea rotundata tubers and purified 55 fold with specific activity of 360 nmol min^-1 mg^-1 protein and a yield of 41.5 %. By electrophoresis of purified enzyme on polyacrylamide gel a single band of phosphorylase activity appeared. The enzyme showed normal Michaelis-Menten kinetics and was activated by AMP. ATP, ADP, ADP-glucose, calcium and magnesium inhibited the enzyme. It is active in the presence and absence of primer. No effects were observed on the addition of glycolytic intermediates or amino acids. Using gel filtration molecular mass of the enzyme determined is 188 000 and the extract seems to contain one form. Properties of the enzyme indicate that phosphorylase from white yam tuber functions primarily as a starch degrading enzyme. The possible role of the enzyme during yam tuber storage is dicussed.     

New starches from traditional Chinese medicine (TCM)--Chinese yam (Dioscorea opposita Thunb.) cultivars

The starches separated from two different Dioscorea opposita Thunb. cultivars were investigated for morphological, thermal and crystal properties. The shape of starch granules separated from different D. opposita Thunb. cultivars varied from round to oval or irregular. The surface of the starch granules appeared to be smooth without any fissures. The average particle diameter of starches from different D. opposita Thunb. cultivars was 40.3 and 38.7mum for D. 47 and D. SXY starch, respectively. The transition temperatures (T(o), T(p) and T(c)) and enthalpy of gelatinization (DeltaH(gel)) were determined using differential scanning calorimetry (DSC). The D. SXY starch showed the lower T(o) (74.2 degrees C) and the broader R (12.4). T(p) and T(c) of starch from D. 47 were higher than that of D. SXY starch. DeltaH(gel) values (11.37J/g) of D. 47 was higher than that of D. SXY starch (10.78J/g). The crystal type of starches separated from two different D. opposita cultivars was a typical C-type pattern. The degree of crystallinity of two D. opposita cultivars starches was about 45.9% and 31.5%, respectively.     

Field Studies on Cross-protection against Japanese yam mosaic virus in Chinese yam (Dioscorea opposita) with an Attenuated Strain of the Virus

An attenuated strain of Japanese yam mosaic virus (JYMV), designated T‐3, was evaluated for its cross‐protection efficacy against virulent (native) strains of JYMV in Chinese yam (Dioscorea opposita) grown in farmers’ fields in Japan. Native strains of JYMV were detected by a polymerase chain reaction‐based assay in all the Chinese yam plants grown from virus‐free tubers in the first growing season in the fields. In contrast, the virus was detected in only one of fifty plants grown from tubers preinoculated with T‐3 during the experiments for 6 years, suggesting that T‐3 consistently cross‐protected against native JYMV in Chinese yam in the field. Chinese yam plants preinoculated with T‐3 produced significantly greater yield of tubers per plant compared with non‐inoculated plants.     

An elicitor-induced cDNA from aerial yam (Dioscorea bulbifera L.) encodes a pathogenesis-related type 4 protein

We established Dioscorea bulbifera (aerial yam) cell suspension cultures to study the expression of defense-related genes upon elicitation with the yam pathogenic ascomycete Colletotrichum gloeosporioides. The induction of phenylalanine-ammonia lyase (PAL) mRNA, coding for a key enzyme involved in phytoalexin biosynthesis, was observed upon elicitation. Using RT-PCR, we isolated an elicited cDNA clone with an open reading frame of 453 nucleotides which showed high homology to cDNA sequences of pathogenesis-related proteins belonging to the PRP-4 group. Yam PRP-4 expression is increased in elicited cell cultures as well as in elicited leaves, and is encoded by a small multigene family. This is the first example for the cloning of a cDNA that might be involved in defense reactions of yam plants. Received: December 1997 / Revision received: June 1998 / Accepted: November 1998     

Quantification of endogenous gibberellins in leaves and tubers of Chinese yam, Dioscorea opposita Thunb. cv. Tsukune during tuber enlargement

Elevengibberellins (GAs) were identified and quantified in extracts of leaves andtubers of the Chinese yam, Dioscorea opposita Thunb. cv.Tsukune by GC-MS-SIM and Kovats retention indices. Five of these gibberellinsare members of the early-13-hydroxylation pathway (GA₅₃,GA₄₄, GA₁₉, GA₂₀ and GA₁), and sixare members of the non-13-hydroxylation pathway (GA₁₂,GA₁₅, GA₂₄, GA₉, GA₃₆ andGA₄). Of these eleven, GA₄₄, GA₁₅ andGA₁ were detected for the first time in Dioscoreaopposita leaf tissues. The major biosynthetic GA pathway in leavesofChinese yam was non C-13 hydroxylation (NCH). In addition, the activeGA₄ content for all harvest dates was greater than that ofGA₁ in the leaves and tubers during tuber development. It issuggested that the higher level of GA₄ in the leaves and tubers maybe closely related to tuber enlargement.     

用ISSR标记技术分析山药品种遗传多样性

利用ISSR标记技术对28个山药品种的遗传多样性进行分析。结果表明,从44条ISSR引物中可筛选出7条能够扩增出清晰、稳定条带的引物;这7条ISSR引物对28个山药品种扩增条带间存在较大差异,多态性条带比率为83．01％,Shannon多样性指数为0．3191;构建的分子树状图将28个山药品种划分为4组：第一组含有日本白、花山药和日本园3个品种;第二组为小叶山药;第三组为嵩野1号;其余23个品种归入第四组。而且主成分分析结果支持上述的聚类分析结果。这为利用ISSR标记技术鉴定山药品种,为有效地利用山药种质资源提供了依据。     

Plant regeneration from embryogenic suspension cultures of Chinese yam (Dioscorea opposita thunb.)

A competent, embryogenic suspension culture of Chinese yam (Dioscorea opposita Thunb. cv. ‘Nagaimo’) has been obtained. Embryogenic callus was induced from stem segments cultured on an agar-solidified MS medium containing 2,4-dichlorophenoxyacetic acid (2,4-D). One month following placement of the embryogenic callus in a liquid medium containing 2,4-D, the embryogenic tissue began to proliferate rapidly. Established suspension cultures consisted almost entirely of early-stage pro-embryos with very little contamination from non-embryogenic tissues. Under optimum conditions, suspension culture packed cell volume increased 2.5-fold per week. Following transfer of the tissue to a hormone-free medium, the embryogenic tissue developed. Globular embryos were formed within 4 weeks and addition of benzyl adenine further enhanced development and germination. Plantlets were regenerated by culturing embryos on a hormone-free agar-solidified medium.     

Studies on tuber starches III. Impact of annealing on the molecular structure,composition and physicochemical properties of yam (Dioscorea sp.) starches grown in Sri Lanka

This study reports the impact of one step annealing on the composition, molecular structure, granule morphology and physicochemical properties of starches isolated from cultivars of Dioscorea esculenta (kukulala, java-ala-nattala) and Dioscorea alata (hingurala, raja-ala), yam tubers grown in Sri Lanka. In all starches, granule morphology (shape, size, surface appearance), birefringence patterns, acid hydrolysis profile and X-ray patterns remained unchanged on annealing. Crystallinity remained unchanged on annealing in hingurala, kukulala and java-ala. However, crystallinity of raja-ala and nattala increased and decreased, respectively, on annealing. In all starches, annealing decreased the gelatinization temperature range (kukulala ～ hingurala > nattala ～ raja-ala > java-ala), amylose leaching (raja-ala > nattala > hingurala > kukulala > java-ala), granular swelling (raja-ala ～ hingurala > kukulala > java-ala > nattala), peak viscosity (raja-ala > hingurala > kukulala > java-ala > nattala), enthalpy of retrogradation (kukulala ～ java-ala ～ nattala ～ hingurala ～ raja-ala) and susceptibility towards acid hydrolysis (java-ala > raja-ala > hingurala ～ nattala > kukulala). However, annealing increased gelatinization temperatures (kukulala ～ java-ala ～ nattala ～ raja-ala ～ hingurala) and the enthalpy of gelatinization (kukulala > hingurala > java-ala > nattala > raja-ala). Set-back viscosity increased in nattala, but decreased in the other starches (raja-ala > hingurala > kukulala > java-ala) on annealing. The study showed that the different responses shown by the cultivars of the Dioscorea starches towards annealing were to a large extent influenced by their composition and molecular structure.     

Life history and population dynamics of the Japanese Yam,Dioscorea japonica thunb.

Shoot morphology at the emergence ofDioscorea japonica Thumb. could be classed into the following three types: (1) a seedling emergence with only one leaf (Se type), (2) a plant consisting of one stem and one leaf, which has emerged from a small tuber (rhizophore) or bulbil less than 50 mg in dry weight (S type) and (3) a twiner with many leaves, which has emerged from a tuber or a bulbil of more than 50 mg in dry weight (L type). The Se type failed to develop beyond the second leaf stage in 1.5% sunlight exposure. The effects of initial plant (seeds, bulbils and tubers) size and light intensity on plant growth were analyzed. The larger the initial plant size was, the greater the growth in height and leaf area was. The distribution ratio of assimilated substances in leaves was high in smaller plants at the early growth stage. The distribution ratio in the tubers of larger plants became high at the early stage of growth. In all three types at over 3% sunlight exposure, the switch-over from the vegetative to reproductive growth phase occurred simultaneously at a later growth stage, but the Se type at 1.5% sunlight exposure showed a very early switch-over in its development; this switch-over may be related to shade tolerance capacity. The L type showed shade avoidance by forming a large productive structure as a twiner     

Patatin,a major soluble protein of the potato (Solanum tuberosum L.) tuber is synthesized as a larger precursor

Antibodies were raised against the highly purified glycoprotein patatin. They were used to characterize the product synthesized in a wheatgerm cell-free translation system, programmed with polyadenylated RNA from potato tubers. Sodium dodecylsulfate-polyacrylamide gel electrophoresis revealed that the immunoprecipitated protein had a molecular mass of 43 kDa compared to 40 for the authentic patatin. It is assumed that patatin is synthesized in vivo as a larger precursor which is processed to the mature protein by cleavage of a signal peptide. Our results are in agreement with sequence-analysis data of patatin complementary DNA which indicate a signal peptide of about 23 amino acids (Mignery et al., 1984; Nucleic Acids Res. 12, 7987–8000).Abbreviation Poly(A)⁺ RNA polyadenylated RNA - SDS-PAGE sodium dodecyl sulfate-polyacrylamide gel electrophoresis Preliminary results were published in Mitteilungsband, Botaniker Tagung in Wien, p. 180, Wien, September 1984     

Severity of spoilage storage rots of white yam (Dioscorea rotundata Poir.)

Severity of storage rots in different sections of white yam tubers (Dioscorea rotundata Poir.) was investigated. Yam samples with rots were collected from a yam barn and from selected markets in Accra, Ghana, to identify the most predominant pathogens associated with the rots. Nine fungal spoilage microorganisms, including Aspergillus flavus, Aspergillus niger, Botryodiplodia theobromae, Fusarium culmorum, Fusarium oxysporium, Fusarium sp., Penicillium brevi‐compactum, Penicillium sp. and Rhizopus stolonifer and a bacterium species Erwinia carotovora were identified. The mean incidence of occurrence of the organisms on rotten tissues ranged from 1.2% to 28.5%. Of the 10 microorganisms isolated, B. theobromae, F. oxysporium and R. stolonifer were the most frequently encountered spoilage microorganisms in the markets. E. carotovora, Fusarium solani and Penicillium sp. were relatively sparse (incidence not exceeding 3%) compared to the other yam spoilage microorganisms. The surface area and weight of necrotic tissue induced by the spoilage fungi in the various zones of the tubers over a 28‐day storage period were assessed. All the spoilage microorganisms produced rots in the yams, although to different degrees. The severity of the rots increased in weight and area over the period when the tubers were in store but were normally not significantly different in the zones of tubers. There was, however, a linear progression of rots in the various zones of the yam tubers. Although there was generally no significant (P ≥ 0.05) difference in the severity of rots induced by the different microorganisms in the tubers, R. stolonifer commonly induced more rot in the zones of the tubers compared to B. theobromae and F. oxysporium.     

Direct plantlet regeneration from male inflorescences of medicinal yam (Dioscorea floribunda Mart. & Gal.)

Summary Segments of male inflorescences of medicinal yam (Dioscorea floribunda) cultured on Murashige and Skoog (MS) medium supplemented with 13.94 μM kinetin (Kn) resulted in the conversion of floral buds into vegetative buds and these later developed into plantlets. Growth and multiplication of shoots could be obtained by culturing individual shoots in MS modified basal medium, replacing the MS standard three vitamins with 10.0 mgl⁻¹ thiamine in addition to 13.94 μM Kn. Root induction was also obtained simultaneously from the base of the shoots in the same medium. Such plantlets have been successfully transferred to potted soil, where they grew normally. Plantlets were also made to develop tubers on MS medium with 18.91 μM abscisic acid (ABA) and also with 2.68 μM α-naphthaleneacetic acid (NAA) and 40–50 gl⁻¹ sucrose.     

Evaluation of neem (Azadirachta indica) seed and ginger (Zingiber officinale) as potential control agents of yam (Dioscorea rotundata Poir.) tuber rot fungi

Yam is an important crop which serves as a source of income to small-holder farmers as well as a foreign exchange earner. Among the constraints faced by yam farmers are pests and diseases, especially deterioration caused by microbes during storage. Since over dependence on pesticides is being discouraged, neem seed and ginger extracts were evaluated as potential control agents against rot-causing fungi. The study was conducted in the Spanish laboratory, at the Faculty of Agriculture, University for Development Studies, Nyankpala Campus. Isolations were made from rotted yam tubers sampled from the Tamale Central market with potato dextrose agar (PDA) as the growth medium. Growth inhibition of the isolates was determined by growing pure cultures on PDA plates amended with 2?ml each of ethanol and aqueous extracts of neem seed and ginger as well as carbendazim. A pathogenicity test proved that Aspergillus flavus, A. niger, A. ochraceus and Penicillium digitatum isolated from the rotted tubers were responsible for the rot. A. niger had a significantly higher (p?<?0.05) occurrence (40%) than the others. Growth inhibitions by carbendazim and ethanol extracts of neem seed and ginger were comparable but significantly higher (p?<?0.05) than the aqueous extracts of neem seed and ginger as well as the control. However, the aqueous extracts of neem seed and ginger had a significantly higher (p?<?0.05) inhibition than the control. For instance, growth inhibition of A. niger by carbendazim, ethanol neem seed and ginger extracts were 70.5, 69.6 and 65.5%, respectively, while inhibition by aqueous neem seed and ginger extracts were 33.9 and 24.8%, respectively. Since aqueous extracts of neem seed and ginger significantly inhibited (p?<?0.05) growth of the rot-causing fungi, they can be used as surface protectants of stored tubers.     

Functional properties of yam bean (Pachyrhizus erosus) starch

The study was carried out in order to determine and establish the functional characters of starch extracted from yam bean (Pachyrhizus erosus (L) Urban) compared with cassava starch. Yam bean is a tropical tuber legume easily grown and holds a great potential as a new source of starch. Yam bean starch shows functional properties which are peculiar to those of most starch root crops. Gelatinization temperature (53-63 degrees C) and the pasting temperature (64.5 degrees C) are less than those of cereal starch, however, the swelling power is high (54.4 g gel/g dried starch). Yam bean starch paste presents a high viscosity profile, high retrogradation tendency and low stability on cooking. The functional properties of yam bean starch, similar to those of cassava starch, allows yam bean to be used as a potential new source of starch.     

Isolation, characterisation and identification of a potyvirus from Dioscorea alata L. (water yam) in Nigeria

A yam potyvirus was isolated from Dioscorea alata samples collected in Nigeria. The virus was not transmissible mechanically but was transmitted by Aphis craccivora to four cowpea cultivars (Ife Brown, IT84S-2114, IT82E-10 and TVu2657), and from which it could be mechanically transmitted between the cowpea cultivars. In infectivity- tests using cowpea extracts, the virus had a dilution end point of 10^-4, a thermal inactivation point of 60–65°C and longevity in vitro of 2 days at room temperature. The virus coat protein had an estimated molecular weight of 32 100 daltons. The virus was identified as an isolate of Dioscorea alata virus (DAV; syn. yam virus 1) due to its biological characteristics and its serological reaction with antiserum raised against DAV. The virus is not related to yam mosaic virus, but distantly related to blackeye cowpea mosaic virus and cowpea aphid-borne mosaic virus.     

Amino acid sequence of the N-terminal domain of yam (Dioscorea japonica) aerial tuber acidic chitinase. Evidence for the presence of a wheat germ agglutinin domain in matured acidic chitinase from unstressed tuber

The amino acid sequence of the N-terminal domain of acidic chitinase from unstressed aerial tuber was determined and proved the presence of an N-terminal domain in acidic chitinase. The amino acid sequence was determined on a pyroglutamylaminopeptidase-treated N-terminal fragment of V8 protease and on chymotryptic peptides of this fragment. The sequence determined revealed 8 residues deletion and 2 residues insertion as compared with the N-terminal domain of tobacco basic chitinase. The N-terminal domain determined showed a homology of 40% and 52% with the N-terminal domain of tobacco basic chitinase and wheat germ agglutinin, respectively.Abbreviations DABITC,4-N,N dimethylaminoazobenzene 4-isothiocyanate - PITC phenylisothiocyanate - Cm carboxymethyl - WGA wheat germ agglutinin - TFA trifluoroacetic acid - PGAP pyroglutamylaminopeptidase