Differential expression of salt-responsive genes to salinity stress in salt-tolerant and salt-sensitive rice (<Emphasis Type="Italic">Oryza sativa</Emphasis> L.) at seedling stage

The understanding of physio-biochemical and molecular attributes along with morphological traits contributing to the salinity tolerance is important for developing salt-tolerant rice (Oryza sativa L.) varieties. To explore these facts, rice genotypes CSR10 and MI48 with contrasting salt tolerance were characterized under salt stress (control, 75 and 150 mM NaCl) conditions. CSR10 expressed higher rate of physio-biochemical parameters, maintained lower Na/K ratio in shoots, and restricted Na translocation from roots to shoots than MI48. The higher expression of genes related to the osmotic module (DREB2A and LEA3) and ionic module (HKT2;1 and SOS1) in roots of CSR10 suppresses the stress, enhances electrolyte leakage, promotes the higher compatible solute accumulation, and maintains cellular ionic homeostasis leading to better salt stress tolerance than MI48. This study further adds on the importance of these genes in salt tolerance by comparing their behaviour in contrasting rice genotypes and utilizing specific marker to identify salinity-tolerant accessions/donors among germplasm; overexpression of these genes which accelerate the selection procedure precisely has been shown.     

Salt Tolerant and Sensitive Rice Varieties Display Differential Methylome Flexibility under Salt Stress

DNA methylation has been referred as an important player in plant genomic responses to environmental stresses but correlations between the methylome plasticity and specific traits of interest are still far from being understood. In this study, we inspected global DNA methylation levels in salt tolerant and sensitive rice varieties upon salt stress imposition. Global DNA methylation was quantified using the 5-methylcytosine (5mC) antibody and an ELISA-based technique, which is an affordable and quite pioneer assay in plants, and in situ imaging of methylation sites in interphase nuclei of tissue sections. Variations of global DNA methylation levels in response to salt stress were tissue- and genotype-dependent. We show a connection between a higher ability of DNA methylation adjustment levels and salt stress tolerance. The salt-tolerant rice variety Pokkali was remarkable in its ability to quickly relax DNA methylation in response to salt stress. In spite of the same tendency for reduction of global methylation under salinity, in the salt-sensitive rice variety IR29 such reduction was not statistically supported. In ‘Pokkali’, the salt stress-induced demethylation may be linked to active demethylation due to increased expression of DNA demethylases under salt stress. In ‘IR29’, the induction of both DNA demethylases and methyltransferases may explain the lower plasticity of DNA methylation. We further show that mutations for epigenetic regulators affected specific phenotypic parameters related to salinity tolerance, such as the root length and biomass. This work emphasizes the role of differential methylome flexibility between salt tolerant and salt sensitive rice varieties as an important player in salt stress tolerance, reinforcing the need to better understand the connection between epigenetic networks and plant responses to environmental stresses.     

The Effects of Salinity on Nitrogen Fixation and Trehalose Metabolism in Mycorrhizal Cajanus cajan (L.) Millsp. Plants

Arbuscular mycorrhizal (AM) fungi exist widely in natural ecosystems as well as in salt-affected soils and are considered suitable candidates for bio-amelioration of saline soils. Plants respond to salinity by accumulating sugars and other low-molecular-weight compatible solutes. One such compound is trehalose, which has been found to play an important role as a stress protectant. The aim of the present investigation was to study interactions between an AM fungus and salinity stress on growth, nitrogen fixation, and trehalose metabolism in Cajanus cajan (L.) Millsp. (pigeonpea). Two genotypes [Sel 85N (salt-tolerant) and ICP 13997 (salt-sensitive)] were subjected to saline treatments with and without mycorrhizal inoculations. Salinity reduced plant biomass (shoot and root) in both genotypes and resulted in a decline in shoot-to-root ratio (SRR); however, a smaller decline was observed in Sel 85N than in ICP 13997. AM colonization was reduced with increasing salinity levels but mycorrhizal responsiveness (MR) increased. Genotypic variability in nitrogen fixation and trehalose metabolism in response to salinity and mycorrhization was observed. An increment in nodule number was accompanied by a reduction in dry mass. Subsequently, nodular activity (leghemoglobin, acetylene-reduction activity [ARA], nitrogen content) was reduced under soil salinity, which was more profound in ICP 13997 than in Sel 85N. The symbiotic association with Glomus mosseae led to significant improvement in plant dry mass and nitrogen-fixing potential of nodules under salt stress. Salinity led to an increase in trehalose-6-P synthetase (TPS) and trehalose-6-P phosphatase (TPP) activities resulting in increased trehalose content in nodules, which was accompanied by inhibition of trehalose catabolism (trehalase activity). AM plants had lower trehalase activity under saline and nonsaline conditions. Thus, a symbiotic relationship between plant roots and G. mosseae might have resulted in salinity tolerance in a genotype-dependent manner.     

Tolerance to reniform nematode (Rotylenchulus reniformis) race A in pigeonpea (Cajanus cajan) genotypes

The reniform nematode (Rotylenchulus reniformis) is an important pathogen of pigeonpea (Cajanus cajan). Forty‐six medium maturity (mature in 151–200 days at Patancheru, India) pigeonpea genotypes were evaluated for resistance and tolerance to the reniform nematode in greenhouse and field tests, over the period 1990–97. Each genotype was screened for number of nematode egg masses on a 1 (no egg mass = highly resistant) to 9 (> 50 egg masses = highly susceptible) scale. Plant biomass production in carbofurantreated plots was compared with that in non‐treated plots in a field naturally infested with R. reniformis. Pigeonpea genotypes C 11, ICPL 87119 and ICPL 270 were used as nematode susceptible checks. Genotypes with good plant growth, both in nematode‐free and nematode‐infested plots, were identified as tolerant and evaluated for plant growth and yield for at least three years. All the tested genotypes were susceptible (7 and 9 egg mass score). Single‐plant‐selections, based on plant vigour and yield, were made from genotypes showing tolerance to nematode infection. The level of tolerance was enhanced by plant‐to‐progeny row selection for plant vigour and seed yield in a nematode‐sick field for at least three years. The most promising nematode tolerant genotypes produced significantly greater yield and biomass than the locally grown pigeonpea cultivars in fields naturally infested with R. reniformis at two locations. Pigeonpea landraces are considered to be the most likely sources of tolerance to the nematode. These reniform nematode tolerant lines represent new germplasm and they are available in the genebank of pigeonpea at ICRISAT bearing accession numbers ICP 16329, ICP 16330, ICP 16331, ICP 16332, and ICP 16333.     

Exogenous Glutathione Modulates Salinity Tolerance of Soybean [<Emphasis Type="Italic">Glycine max</Emphasis> (L.) Merrill] at Reproductive Stage

In this study, we evaluated salt stress responses of 11 soybean genotypes and explored the protective roles of exogenous glutathione (GSH) against salt toxicity by assessing various biochemical and yield-attributing parameters. Exposure of the soybean genotypes to salt stress at the reproductive (R1) stage significantly decreased their yields by down-regulating the yield-contributing parameters as compared with unstressed controls. The highest decrease was found in number of seeds plant^?1, yield plant^?1, and number of pods plant^?1, whereas the lowest decrease was recorded in number of seeds pod^?1. Exogenous GSH was found to be effective in improving salinity tolerance, and the highest positive effects of GSH were recorded in terms of yield plant^?1, number of seeds plant^?1 and number of pods plant^?1, whereas its lowest effect was observed with respect to the 100-seed weight. Cluster analysis of the genotypes based on yield-contributing and yield data revealed different levels of salt tolerance. Notably, BINA-01 and -02, and BINA-04 were recognized as the highest and lowest salt-tolerant genotypes, respectively. Furthermore, exogenous GSH alleviated oxidative stress in the representative contrasting genotypes at the vegetative (V3) stage by decreasing salt-induced accumulation of malondialdehyde and hydrogen peroxide. Taken together, our findings revealed that exogenous GSH application can minimize oxidative stress and contribute to the improvement of yield-contributing parameters, leading to improved yield in soybean genotypes under salt stress. Further investigations on molecular aspects will enable us to gain an in-depth understanding of how exogenous GSH can improve salinity tolerance in soybean, particularly at reproductive stage, to discover relevant pathways for biotechnological manipulation.     

Omeprazole treatment elicits contrasting responses to salt stress in two basil genotypes

Omeprazole (OP) has been shown to act as a plant growth regulator and enhances tolerance to salt stress. In this study, two Ocimum basilicum genotypes were tested for their responses to OP under salt stress. The two genotypes, Napoletano (NAP) a salt sensitive genotype, and Genovese (GEN) a salt tolerant genotype, had contrasting responses to OP treatment. NAP demonstrated increases in terms of growth (+36%) and salt tolerance (+19%) upon treatment while GEN had a growth increase (+35%) and OP enhanced sensitivity to salt stress (?13%). OP treatment also had an effect on the post‐harvest behaviour of these two genotypes by increasing NAP shelf life while decreasing GEN shelf life. The contrasting responses to OP in these two genotypes has provided insight into the role of this molecule in mediating growth and adaptation to stress and, more importantly, into the complexity of the mechanisms mediating these processes.     

Discerning of Rice Landraces (Oryza sativa L.) for Morpho-physiological,Antioxidant Enzyme Activity,and Molecular Markers’ Responses to Induced Salt Stress at the Seedling Stage

Salinity has been identified as key abiotic stress factor limiting rice production in many countries around the globe, including Bangladesh. In the present study, we examined the effects of salt-induced toxicity on growth of rice landraces for screening salt-tolerant genotypes by assessing morpho-physiological, biochemical, and molecular responses. Screening of 28 rice genotypes at seedling stage was performed at 12 dS m⁻¹ salinity level in hydroponic media. Most of the rice genotypes showed an apparent reduction in growth traits, while a fewer showed less reduction under salinity stress. Euclidean clustering and heatmap based on morpho-physiological parameters dissected rice genotypes into three major clusters, viz., susceptible, moderately tolerant, and tolerant. Results of cluster analysis revealed Nonabokra, Hogla, Ghunsi, Holdegotal, Nonabokra, and Kanchon as salt-tolerant rice genotypes. These genotypes also were grouped using three microsatellite markers, viz., RM493, RM3412b, and RM140 that were closely linked to saltol QTL showed Hogla, Ghunsi, Holdegotal, Nonabokra, Kanchon, BINA dhan-8, and BINA dhan-10 as salt-tolerant genotypes considering genetic similarity in dendrogram. The positive relationships of Na⁺/K⁺ ratio with hydrogen peroxide (H₂O₂) and malondialdehyde (MDA), and antioxidant enzymes’ activity in the tolerant rice genotypes indicated their importance for improving salinity tolerance. The salt-tolerant landraces showed lower Na⁺/K⁺ ratio, high proline accumulation, lower H₂O₂ accumulation and MDA content, and higher catalase and ascorbate peroxidase activities. Higher antioxidant enzymes’ activity and lower H₂O₂ accumulation in tolerant genotypes indicate their abilities to fight against oxidative stress. Based on all morpho-physiological clustering, biochemical response, and molecular dendrogram, Nonabokra, Hogla, Ghunsi, Holdegotal, and Kanchon were identified as the salt-tolerant landraces. Therefore, these identified salt-tolerant landraces could be useful to improve breeding program for the development of salt-tolerant high-yielding rice cultivars in future.

     

Sodium and Chloride Sensitivity in Alfalfa (Medicago sativa L.): Growth,Photosynthesis, and Tissue Ion Regulation in Contrasting Genotypes

Alfalfa (Medicago sativa L.) is a moderately salt-tolerant plant. This study was conducted to evaluate responses of two contrasting alfalfa genotypes (OMA-84-salt sensitive and OMA-285-salt-tolerant) to components (Na⁺, and/or Cl^?) of salt stress. Alfalfa genotypes were exposed to Na⁺???salts (without chloride), Cl^????salts (without sodium), and NaCl (sodium chloride) stresses with two concentrations (30 and 150 mM). The treatments, involving macronutrients, with the same osmotic potentials, were taken as control. Salt stress, irrespective of type and intensity, caused a significant reduction in plant biomass, physiological (net photosynthetic rate, photosystem II efficiency, chlorophyll fluorescence, water use efficiency, maximum yield of primary photochemistry, and electron transport rate), and shoot mineral (calcium, magnesium, phosphorus, and potassium) contents compared to control; however, this reduction was in the order of NaCl (150 mM)?>?Na⁺ (150 mM)?>?Cl^? (150 mM). The alfalfa genotype OMA-285 sustained growth under both types of salt stresses than the genotype OMA-84 due to less accumulation of Na⁺ and Cl^? ions, maintenance of higher K⁺/Na⁺ ratio, and better photosynthetic activities. In conclusion, salt stress caused a significant reduction in alfalfa growth, this reduction was more under NaCl stress and the effect was mainly additive. The alfalfa genotype OMA-285 sustained growth under salt stresses than the genotype OMA-84 due to ionic homeostasis. However, the tested genotypes were more sensitive to Na⁺ toxicity than the Cl^? toxicity, and the contrasting genotypes differed in tissue tolerance of high Na⁺ and Cl^?. Further research is needed to evaluate tissue tolerance in a diverse and large group of alfalfa genotypes to elucidate the general salt tolerance mechanism in alfalfa.

     

Regulation of protein synthesis in root, shoot and embryonic tissues of germinating barley during salinity stress

Abstract Protein synthesis during seed germination, a stage vulnerable to salinity stress, was investigated. The responses of barley genotypes, CM72 (California Mariout 72) and Prato, toward salinity were different during seed germination. Germination of CM72 was unaffected up to 0.34 kmol m^?3 (2%) NaCl, but that of Prato was reduced 30% by 0.17 kmol m ³ NaCl and 75% by 0.34 kmol m^?3 NaCl. Therefore, the former genotype is relatively more salt-tolerant than the latter. Protein synthesis in roots, shoots, and embryos was investigated in these two genotypes before and after salinity stress. The uptake of S-methionine and its incorporation into protein were significantly reduced by salinity in both genotypes. The inhibition of global protein synthesis was significant in roots and shoots. Proteins from different tissues were resolved by single and two dimensional gels. The steady-state protein levels were maintained remarkably well during salinity stress in roots and shoots. Likewise, proteins in germinating embryos were stable except for a 42-kilodalton protein unique to the salt tolerant genotype which was apparently degraded during salinity stress. Salinity, around 0.34 kmol m^?3 NaCl, induced both quantitative and qualitative changes in the expression of some proteins labelled in vivo. The quantitative changes included repression or enhancement of synthesis of selected groups of proteins. Around 8% of the nearly 400 resolved proteins in a tissue was affected this way. Some of the proteins in this category were specific to each genotype. About 1 % of the total showed qualitative changes; these proteins were expressed only during salinity stress. In roots, two proteins (28, 41.7 kilodaltons) were detected in CM72 and five (28, 45, 60.5, 76.5, 82.5 kilodaltons) in Prato; only the 28-kilodalton protein was common to both genotypes. In shoots, four proteins (45, 60.5, 76.5, 82.5 kilodaltons) were found only in Prato and these were similar to those induced in roots. The four new proteins (32, 37.5, 89, 92 kilodaltons) in germinating embryos were apparently induced only in CM72; these were distinctly different from those detected in developed roots and shoots. The unique protein changes induced by salinity stress during germination (this study) and seedling growth studies reported earlier (Ramagopal, 1987b) are apparently different. The findings demonstrate that ontogeny plays an important role in the expression of tissue-specific proteins during salinity stress in the salt tolerant and sensitive barley genotypes.     

Short-term response of wild grapevines (<Emphasis Type="Italic">Vitis vinifera</Emphasis> L<Emphasis Type="Italic">. ssp. sylvestris</Emphasis>) to NaCl salinity exposure: changes of some physiological and molecular characteristics

The physiological and molecular response to salt stress was studied in two wild grapevine (Vitis vinifera L. ssp. sylvestris or Vitis sylvestris) accessions “Khédhayria” and “Houamdia”, previously identified as salt-tolerant and salt-sensitive pair wise. Plants from both accessions were subjected to a progressive salt stress by the use of a nutritional solution containing up to 150 mM NaCl for 2 weeks. Salt stress adversely affected growth and water potential since the first day of exposure to 150 mM NaCl. However, chlorophyll fluorescence parameters were unchanged until 14 days of salt exposure. At that time point the predawn water potential (Ψ_PD), the non-photochemical quenching of fluorescence (NPQ) and the coefficient of photochemical quenching (q_p) were significantly less altered in the tolerant accession. At the molecular level semi-quantitative RT-PCR assays revealed a differential expression of (Vs α-gal/SIP and Vs DHN) genes within these contrasting accessions after exposure to 24 h and 14 days of salt. Comparably, the Vs RD22 gene had increased slightly after only 14 days of treatment in both accessions. These results were the first pieces of information reported on the early and late regulation of salt response genes in wild grapevines. Furthermore, genotype-dependent parameters such as NPQ, q_p, mRNA levels of Vs α-gal/SIP and Vs DHN could be used to screen salt-tolerant wild grapevine genotypes.     

Expression of cold and drought regulatory protein (CcCDR) of pigeonpea imparts enhanced tolerance to major abiotic stresses in transgenic rice plants

Main conclusion

Transgenic rice expressing pigeonpea Cc CDR conferred high-level tolerance to different abiotic stresses. The multiple stress tolerance observed in CcCDR -transgenic lines is attributed to the modulation of ABA-dependent and-independent signalling-pathway genes.

Stable transgenic plants expressing Cajanus cajan cold and drought regulatory protein encoding gene (CcCDR), under the control of CaMV35S and rd29A promoters, have been generated in indica rice. Different transgenic lines of CcCDR, when subjected to drought, salt, and cold stresses, exhibited higher seed germination, seedling survival rates, shoot length, root length, and enhanced plant biomass when compared with the untransformed control plants. Furthermore, transgenic plants disclosed higher leaf chlorophyll content, proline, reducing sugars, SOD, and catalase activities, besides lower levels of MDA. Localization studies revealed that the CcCDR-GFP fusion protein was mainly present in the nucleus of transformed cells of rice. The CcCDR transgenics were found hypersensitive to abscisic acid (ABA) and showed reduced seed germination rates as compared to that of control plants. When the transgenic plants were exposed to drought and salt stresses at vegetative and reproductive stages, they revealed larger panicles and higher number of filled grains compared to the untransformed control plants. Under similar stress conditions, the expression levels of P5CS, bZIP, DREB, OsLEA3, and CIPK genes, involved in ABA-dependent and-independent signal transduction pathways, were found higher in the transgenic plants than the control plants. The overall results amply demonstrate that the transgenic rice expressing CcCDR bestows high-level tolerance to drought, salt, and cold stress conditions. Accordingly, the CcCDR might be deployed as a promising candidate gene for improving the multiple stress tolerance of diverse crop plants.

     

Differential Responses of <i>NHX1</i> and <i>SOS1</i> Gene Expressions to Salinity in two <i>Miscanthus sinensis</i> Anderss. Accessions with Different Salt Tolerance

The lignocellulosic crop Miscanthus spp. has been identified as a good candidate for biomass production. The responses of Miscanthus sinensis Anderss. to salinity were studied to satisfy the needs for high yields in marginal areas and to avoid competition with food production. The results indicated that the relative advantages of the tolerant accession over the sensitive one under saline conditions were associated with restricted Na⁺ accumulation in shoots. Seedlings of two accessions (salt-tolerant ‘JM0119’ and salt-sensitive ‘JM0099’) were subjected to 0 (control), 100, 200, and 300 mM NaCl stress to better understand the salt-induced biochemical responses of genes involved in Na⁺ accumulation in M. sinensis. The adaptation responses of genes encoding for Na⁺ /H⁺ antiporters, NHX1 and SOS1 to NaCl stress were examined in JM0119 and JM0099.The cDNA sequences of genes examined were highly conserved among the relatives of M. sinensis based on the sequencing on approximate 600 bp-long cDNA fragments obtained from degenerate PCR. These salt-induced variations of gene expression investigated by quantitative real-time PCR provided evidences for insights of the molecular mechanisms of salt tolerance in M. sinensis. The expression of NHX1 was up-regulated by salt stress in JM0119 shoot and root tissues. However, it was hardly affected in JM0099 shoot tissue except for a significant increase at the 100 mM salt treatment, and it was salt-suppressed in the JM0099 root tissue. In the root tissue, the expression of SOS1 was induced by the high salt treatment in JM0119 but repressed by all salt treatments in JM0099. Thus, the remarkably higher expression of NHX1 and SOS1 were associated with the resistance to Na⁺ toxicity by regulation of the Na⁺ influx, efflux, and sequestration under different salt conditions.     

Physiological and Biochemical Characteristics and Response Patterns of Salinity Stress Responsive Genes (SSRGs) in Wild Quinoa (<i>Chenopodium quinoa</i> L.)

Cultivating salt-tolerant crops is a feasible way to effectively utilize saline-alkali land and solve the problem of underutilization of saline soils. Quinoa, a protein-comprehensive cereal in the plant kingdom, is an exceptional crop in terms of salt stress tolerance level. It seems an excellent model for the exploration of salt-tolerance mechanisms and cultivation of salt-tolerant germplasms. In this study, the seeds and seedlings of the quinoa cultivar Shelly were treated with different concentrations of NaCl solution. The physiological, biochemical characteristics and agronomic traits were investigated, and the response patterns of three salt stress-responsive genes (SSRGs) in quinoa were determined by real-time PCR. The optimum level of stress tolerance of quinoa cultivar Shelly was found in the range of 250–350 mM concentration of NaCl. Salt stress significantly induced expression of superoxide dismutase (SOD), peroxidase (POD), and particularly betaine aldehyde dehydrogenase (BADH). BADH was discovered to be more sensitive to salt stress and played an important role in the salt stress tolerance of quinoa seedlings, particularly at high NaCl concentrations, as it displayed upregulation until 24 h under 100 mM salt treatment. Moreover, it showed upregulation until 12 h under 250 mM salt stress. Taken together, these results suggest that BADH played an essential role in the salt-tolerance mechanism of quinoa. Based on the expression level and prompt response induced by NaCl, we suggest that the BADH can be considered as a molecular marker for screening salt-tolerant quinoa germplasm at the early stages of crop development. Salt treatment at different plant ontogeny or at different concentrations had a significant impact on quinoa growth. Therefore, an appropriate treatment approach needs to be chosen rationally in the process of screening salt-tolerant quinoa germplasm, which is useful to the utilization of saline soils. Our study provides a fundamental information to deepen knowledge of the salt tolerance mechanism of quinoa for the development of salt-tolerant germplasm in crop breeding programs.     

短期NaCl胁迫对不同小麦品种幼苗K+吸收和Na+、K+积累的影响

为研究盐胁迫下小麦幼苗生长及Na⁺、K⁺的吸收和积累规律,以中国春、洲元9369和长武134等3种耐盐性不同小麦品种为材料,采用非损伤微测技术检测盐胁迫2 d后的根系K⁺离子流变化,并对植株体内的Na⁺、K⁺含量进行测定。结果表明:短期(2d)盐胁迫对小麦生长有抑制作用,且对根系的抑制大于地上部,耐盐品种下降幅度小于盐敏感品种。盐胁迫下,小麦根际的 K⁺大量外流,盐敏感品种中国春K⁺流速显著高于耐盐品种长武134,最高可达15倍。小麦幼苗地上部分和根系均表现为Na⁺积累增加,K⁺积累减少,Na⁺/K⁺比随盐浓度增加而上升。中国春限Na⁺能力显著低于长武134,Na⁺/K⁺则显著高于长武134。综上所述,盐胁迫下造成小麦组织器官中Na⁺/K⁺比上升的主要原因是根系K⁺大量外流和Na⁺的过量积累,耐盐性不同的小麦品种间差异显著,并认为根系对K⁺的保有能力可能是作物耐盐性评价的一个重要指标。