Justus Liebig and the Plant Physiologists

In his book Organic Chemistryin its Application to Agriculture andChemistry, Justus Liebig attacked ``the plantphysiologists' for their support of the humustheory and for their general ignorance ofchemistry. Two leading botanists, MatthiasSchleiden and Hugo von Mohl, responded bysharply criticizing Liebig for his lack ofknowledge of plants and his misrepresentationof the views of plant physiologists. The originand character of this debate can be understoodin part through the temperaments of Liebig andSchleiden, but can be viewed also as a contestfor control between the well-establisheddiscipline of chemistry and a potentialdiscipline of plant physiology that had as yetacquired no stable institutional foundations.     

Molecular phylogeny and systematics of oligochaeta: Pro et contra

The systematics of oligochaete worms was discussed by experts for the entire 20th century. The development of computing and molecular techniques hold promise for the construction of a phylogenetically reasonable system. However, the eliminating of some paraphyletic lineages did not result in unanimous approval among a wide range of biologists (mainly morphologists and ecologists). Molecular systematics has helped clear up the position of many controversial species and genera, while causing doubts about the classification of higher rank taxa, which seemed to be logical and stable until recently.     

Lysophosphatidic acid as an autocrine and paracrine mediator

Recent studies have established that lysophosphatidic acid (LPA) is produced by a wide variety of cell types, and that most mammalian cells express receptors for LPA. These findings raise the hypothesis that LPA acts as an autocrine mediator to initiate signaling in the cells where it is produced, as well as a paracrine mediator to affect neighboring cells. The extent to which these scenarios occur will depend on the species of LPA generated, the LPA receptors expressed, and the ability of these receptors to bind to the LPA produced. The enzymes involved in LPA synthesis and their cellular localization in relationship to LPA receptors are also likely to be important. Studies addressing these issues with respect to the potential roles of LPA as an autocrine and paracrine mediator are reviewed, with examples.     

Hotheaded: TRPV1 as mediator of hippocampal synaptic plasticity

TRPV1 is a sensory transduction channel that mediates thermal nociception and some aspects of pathological pain. In this issue of Neuron, Gibson et al. report that TRPV1 also plays important roles in hippocampal synaptic plasticity, presenting a potential challenge for TRPV1-targeted therapeutics for the treatment of pain.     

Evaluation of microvascular density in tumors: pro and contra

Microvascular density (MVD) counting protocols have become the morphological gold standard to assess the neovasculature in human tumors. This method requires the use of specific markers to vascular endothelium and of immunohistochemical procedures to visualize microvessels. MVD determined in primary tumors is significantly associated with metastasis and prognosis in several tumors and is most predictive in those tumors that induce significant angiogenesis, namely carcinomas of breast and prostate, and haematological malignancies. There is such a wide range of antibodies and suppliers, antigen retrieval methods, designation of high and low vessel count groups, patient study groups and data interpretation, that it is exceedingly difficult to compare results.     

Flexibility contra Stiffness: The Phragmoplast as a Physical Barrier for Beads But Not for Vesicles

In plant cells, Golgi vesicles are transported to the division plane to fuse with each other, forming the cell plate, the initial membrane-bordered cell wall separating daughter cells. Vesicles, but not organelles, move through the phragmoplast, which consists of two opposing cylinders of microtubules and actin filaments, interlaced with endoplasmic reticulum membrane. To study physical aspects of this transport/inhibition process, we microinjected fluorescent synthetic 1,2-dioleoyl-sn-glycero-3-phospho-rac-1-glycerol (DOPG) vesicles and polystyrene beads into Tradescantia virginiana stamen hair cells. The phragmoplast was nonselective for DOPG vesicles of a size up to 150 nm in diameter but was a physical barrier for polystyrene beads having a diameter of 20 and 40 nm and also when beads were coated with the same DOPG membrane. We conclude that stiffness is a parameter for vesicle transit through the phragmoplast and discuss that cytoskeleton configurations can physically block such transit.Cells and their constituents are physical entities, and next to chemical interactions, cell structures are determinants of cell behavior. Therefore, apart from techniques to image living cells at the subcellular level, experiments are needed that probe physical parameters important in cell function in vivo. We took the plant phragmoplast structure to answer the question whether the physical aspect “stiffness” is a factor in the inhibition of transport through this structure by microinjecting synthetic vesicles and polystyrene beads in Tradescantia virginiana stamen hair cells during cytokinesis, when the phragmoplast is essential for partitioning the cytoplasm between two daughter cells. Plant cells partition by producing a cell plate made of fused 60- to 80-nm-diameter vesicles (Staehelin and Hepler, 1996; Jürgens, 2005) proven to be Golgi vesicles (Reichardt et al., 2007). Their content becomes the new cell wall and their membranes become the daughter cell plasma membranes. The phragmoplast consists of two opposing cylinders of microtubules and actin filaments, interlaced with similarly aligned endoplasmic reticulum (ER) membranes. This phragmoplast cytoskeleton is the transport vehicle for Golgi vesicles to the plane where the cell plate is being formed (Staehelin and Hepler, 1996; Valster et al., 1997), keeps them in this plane (Esseling-Ozdoba et al., 2008b), where they fuse with each other (Samuels et al., 1995; Otegui et al., 2001; Seguí-Simarro et al., 2004), and assists in the proper attachment of the cell plate to the parental cell wall (Valster et al., 1997; Molchan et al., 2002). Transit of organelles, including Golgi bodies, is inhibited (Staehelin and Hepler, 1996; Nebenführ et al., 2000; Seguí-Simarro et al., 2004). Most of these data are known from static electron microscopy images. Electron microscopy after high-pressure freezing and freeze substitution (Thijsen et al., 1998) and electron tomography studies (Otegui et al., 2001; Seguí-Simarro et al., 2004; Austin et al., 2005) show that, in the early stage of cell plate formation in the center and later at the phragmoplast border, microtubules are aligned parallel to each other at distances of 20 to 100 nm. Keeping in mind that also actin filaments and ER membranes, aligned in the same orientation, are present between the microtubules, this leaves little room for the cell plate-forming vesicles during their transport through this phragmoplast.Clearly, during the past decade, significant progress has been made in the elucidation of the structural organization of cell plate-forming phragmoplasts, which has set the stage for studies to elucidate physical properties of phragmoplasts. The experimental approach we use is injecting particulate and vesicular fluorescent probes into living and dividing cells and observing the extent to which such probes can enter the phragmoplast and can be transported to the cell plate region. We have shown before that synthetic lipid 1,2-dioleoyl-sn-glycero-3-phospho-rac-1-glycerol (DOPG) vesicles of 60 nm diameter are transported through the phragmoplast, accumulate, and are kept in the cell plate region but do not fuse (Esseling-Ozdoba et al., 2008b). Now, we asked whether similar, flexible, synthetic lipid (DOPG) vesicles of various sizes, smaller and larger than endogenous vesicles, as well as stiff polystyrene beads, and such beads coated with the DOPG membrane, are transported through the phragmoplast and enter the plane where the cell plate is being formed, a question pertaining to a physical property of the phragmoplast. Our principal finding is that injected synthetic vesicles up to 150 nm diameter can enter and be transported to the cell plate region, where they accumulate but do not become incorporated into the cell plate. In contrast, polystyrene beads, the noncoated ones and those coated with the same lipid as the vesicles with diameters of 20 and 40 nm, can enter phragmoplasts but cannot be transported to the cell plate region, and the 40-nm beads slow cell plate formation, possibly by interfering with the delivery of normal, cell plate-forming vesicles to the cell plate.     

Humboldt,Darwin, and population

Conclusions I have attempted to clarify some of the pathways in the development of Darwin's thinking. The foregoing examples of influence by no means include all that can be found by comparing Darwin's writings with Humboldt's. However, the above examples seem adequate to show the nature and extent of this influence. It now seems clear that Humboldt not only, as had been previously known, inspired Darwin to make a voyage of exploration, but also provided him with his basic orientation concerning how and what to observe and how to write about it. An important part of what Darwin assimilated from Humboldt was an appreciation of population analysis as a tool for assessing the state of societies and of the benefits and hardships which these societies can expect to receive from the living world around them.Darwin exhibited in his Journal of Researches a casual interest in the economic and political conditions of the countries he visited, but these considerations were much less important to him than to Humboldt. Instead, Darwin, with the assistance of Lyell's Principles of Geology, shifted from Humboldt's largely economic framework to a biological one built around the species question. This shift led Darwin away from a consideration of how the population biology of animals was related to man's economy to focus instead upon how population biology fitted into the economy of nature.Humboldt's Personal Narrative served very well as a model for Darwin's Journal of Researches, thereby helping Darwin gain scientific eminence. The Journal of Researches, like virtually all of Humboldt's writings, was a contribution to scientific orthodoxy. But Darwin had, along the way, acquired an urge to do more than just add his building blocks to the orthodox scientific edifice. He decided to rearrange those blocks of knowledge into a different structure, and for that task neither Humboldt's Personal Narrative nor any other of his works could serve as a model. Humboldt had lacked the confidence which Darwin needed that biogeography and the origin of species could be understood. Humboldt had not explored very far the possible connections between biology and geology. Nor had he provided a general synthetic account of population biology. Had he done so, he might have been more explicit about the extent of his endorsement of Malthus. But even if he had, Humboldt's strong orientation toward cooperation would probably have inhibited his recognition of the importance of competition in nature.Lyell, who had also benefited from reading Humboldt, gave Darwin insights that were lacking in Humboldt's Personal Narrative. Lyell admirably demonstrated how stratigraphy, paleontology, biogeography, and population biology could be interrelated, and his reasons for doing so were essentially the same as Darwin's. Lyell's understanding of biogeography and ecology came from the writings of Augustin-Pyramus de Candolle as much as from Humboldt's, and from the former Lyell derived an appreciation for the importance of competition and also a confidence that the mysteries of biogeography could be explained.¹¹⁷ Furthermore, Lyell's discussion of all these subjects and also of evolution in his Principles of Geology is a good synthetic argument that was the ideal model for Darwin's greatest book.Darwin, having become convinced that species change through time, was able to synthesize in his mind the contributions which he had derived from the writings of Humboldt and Lyell as they applied to the species question. When Darwin wrote his Journal of Researches there were two large gaps in his thinking about evolution that bothered him—the mechanism of evolution and the causes of extinction. It was only after reading Malthus in 1838 that he realized, as Lyell had more or less pointed out, how important was competition in nature. He now had the general outlines for his theory, and in the 1845 abridged edition of his Journal, now retitled The Voyage of the Beagle, he inserted a fuller discussion of competition in nature which showed his awareness of its importance as an ecological factor.¹¹⁸An abridged version of this paper was presented at the meeting of the History of Science Society in Washington, D.C., on 29 December 1969.     

Macrophage cytotoxicity: interleukin 1 as a mediator of tumor cytostasis

Purified macrophage interleukin 1 (IL 1) induced a concentration-dependent inhibition of the proliferation of two commonly used tumor cell target lines, the human myeloid K562 and the murine T lymphoma Eb. In contrast, mastocytoma-derived P815 cells were not inhibited. The cytostatic action of IL 1 was not associated with direct cytotoxicity and was only partially reversible. PGE or interferon did not appear to mediate these effects. IL 1 treatment of the multipotential K562 cells revealed no morphologic evidence for the induction of specific differentiation. FACS analysis of IL 1-treated K562 cells showed a rapid decrease in transferrin receptor density, and a more delayed, but highly significant, increase in HLA-A,B,C antigen density. These findings provide one explanation for the frequently reported macrophage cytostatic actions against tumor cells, and indicate as well that IL 1, like interferon, may enhance the expression of Class I MHC antigens. These observations further extend the range of IL 1 actions and underscore the fundamental and direct role of this monokine in macrophage antitumor activity.     

Chromatin structure as a mediator of aging

The aging process is characterized by gradual changes to an organism’s macromolecules, which negatively impacts biological processes. The complex macromolecular structure of chromatin regulates all nuclear processes requiring access to the DNA sequence. As such, maintenance of chromatin structure is an integral component to deter premature aging. In this review, we describe current research that links aging to chromatin structure. Histone modifications influence chromatin compaction and gene expression and undergo many changes during aging. Histone protein levels also decline during aging, dramatically affecting chromatin structure. Excitingly, lifespan can be extended by manipulations that reverse the age-dependent changes to chromatin structure, indicating the pivotal role chromatin structure plays during aging.     

Hydrogen peroxide as a paracrine vascular mediator: regulation and signaling leading to dysfunction

Numerous studies have demonstrated the ability of a variety of vascular cells, including endothelial cells, smooth muscle cells, and fibroblasts, to produce reactive oxygen species (ROS). Until recently, major emphasis was placed on the production of superoxide anion (O(2)(-)) in the vasculature as a result of its ability to directly attenuate the biological activity of endothelium-derived nitric oxide (NO). The short half-life and radius of diffusion of O(2)(-) drastically limit the role of this ROS as an important paracrine hormone in vascular biology. On the contrary, in recent years, the O(2)(-) metabolite hydrogen peroxide (H(2)O(2)) has increasingly been viewed as an important cellular signaling agent in its own right, capable of modulating both contractile and growth-promoting pathways with more far-reaching effects. In this review, we will assess the vascular production of H(2)O(2), its regulation by endogenous scavenger systems, and its ability to activate a variety of vascular signaling pathways, thereby leading to vascular contraction and growth. This discussion will include the ability of H(2)O(2) to (i) initiate calcium flux as well as (ii) stimulate pathways leading to sensitization of contractile elements to calcium. The latter involves a variety of protein kinases that have also been strongly implicated in vascular hypertrophy. Previous intensive study has emphasized the ability of NADPH oxidase-derived O(2)(-) and H(2)O(2) to activate these pathways in cultured smooth muscle cells. However, growing evidence indicates a considerably more complex array of unique oxidase systems in the endothelium, media, and adventitia that appear to participate in these deleterious effects in a sequential and temporal manner. Taken together, these findings seem consistent with a paracrine effect of H(2)O(2) across the vascular wall.     

Obestatin as contractile mediator of excised frog heart

The aim of this study is to investigate the mechanism of positive inotropic effect of obestatin on in vitro heart preparations of Rana ridibunda frog. The application of increasing amounts of obestatin in the concentration range from 1 μmol/l to 1 μmol/l significantly enhances the force of contraction of excised and cannulated frog hearts. This effect was partially reduced in the presence of prazosin (3 μmol/l). Propranolol (30 μmol/l), pertussis toxin (2 ng/ml) and the specific inhibitor of cAMP-dependent protein kinase (PKA) Rp-adenosine 3′,5′-cyclic monophosphothioate triethylamine (30 μmol/l) completely blocked the obestatin-induced increase of the force of frog heart contractions. It is concluded that, via its receptor molecule, obestatin activates neuronal pertussis toxin sensitive G-protein(s) that further enhance the secretion of epinephrine from sympathetic neurons. This epinephrine activates mainly the myocardial β-adrenoreceptors and PKA downstream targets, and is responsible for the observed positive inotropic effect of obestatin. An alternative explanation of our data is that obestatin directly enhances the effect of myocardial β-adrenergic signaling.     

Profilin as a potential mediator of membrane-cytoskeleton communication

Profilin, the prototype actin-monomer-sequestering protein, has recently emerged as a multifunctional protein with several different activities. Genetic evidence in yeast and flies confirms that profilin is required for a normal actin cytoskeleton, while biochemical evidence suggests a role in regulating phosphoinositide signalling. New studies suggest that profilin may interact with other ligands, and even its role in regulating actin polymerization is now being re-evaluated.