Breeding biology of Western Bonelli’s Warblers Phylloscopus bonelli in the Mediterranean region

Capsule: The Western Bonelli’s Warbler Phylloscopus bonelli has a nest success of only 25% in the core of its range in western Europe.

Aims: To investigate the breeding biology of Western Bonelli’s Warbler P. bonelli, focusing on possible altitude effects and potential reproductive problems.

Methods: Three Western Bonelli’s Warbler populations were monitored during the 2012 and 2013 breeding seasons in the massif range of Sierra Nevada, Spain. We determined all the breeding parameters and calculated daily survival and success rates for each reproductive period.

Results: The three studied populations did not differ in any breeding parameters. Altitude showed a positive relationship with clutch size and duration of incubation period, but a negative relationship with nestling tarsus growth and body mass gain. Daily survival rates during incubation and nestling periods were similar to those of common warblers, but the species presented a low breeding success of 25%.

Conclusion: The absence of differences among the three populations suggests that the information provided here could be representative of its distribution in the woodlands of Sierra Nevada. The novel and detailed information reported is crucial not only for expanding our understanding of this species but also to draw attention to the potential risks that it might face in the near future, considering the reduction that this species has suffered in Sierra Nevada during recent decades.     

Song in two cryptic species: comparative analysis of Large-billed Reed Warblers Acrocephalus orinus and Blyth’s Reed Warblers Acrocephalus dumetorum

Capsule: Songs of Large-billed Reed Warblers Acrocephalus orinus and Blyth’s Reed Warblers Acrocephalus dumetorum differed in quantitative parameters. Blyth’s Reed Warbler used different modes of singing on breeding grounds and migration stopovers.

Aims: To compare the songs of two cryptic species of reed warblers. To compare Blyth’s Reed Warbler songs in different parts of the breeding range and on migration stopovers in central Asia. To investigate the status of Blyth’s Reed Warblers in central Asia.

Methods: We analysed song recordings of individual singing males and conducted field observations of singing behaviour at migration stopover and breeding sites. The status of Blyth’s Reed Warblers in central Asia was reviewed from the historical Russian literature and other sources.

Results: We found differences between six out of eight variables in songs of Large-billed and Blyth’s Reed Warblers on breeding sites. Blyth’s Reed Warbler songs recorded on migration stopovers showed differences in five variables from Large-billed Reed Warblers and in six variables from breeding Blyth’s Reed Warblers. On migration stopovers, Blyth’s Reed Warblers sang actively but did not stay more than 1–2 days. The evidence suggests that Blyth’s Reed Warbler does not breed in central Asia.

Conclusion: Songs of Large-billed and Blyth’s Reed Warblers could be distinguished by quantitative analysis. Blyth’s Reed Warblers used different modes of singing on breeding sites and migration stopovers. We believe vocalizations of Blyth’s Reed Warblers on migration to be plastic song.     

Bhattacharyya’s distance measure as a precursor of genetic distance measures

In Population Genetics, two populations are distinguished from each other on the basis of the differences in the distributions of the alleles at the locus or loci under consideration. These differences are measured by a “genetic distance” between the two populations (not to be confused with genetic distance between two loci, which is based on recombination fractions) and they play a major role in inferences at the population level. Several measures of genetic distance have been proposed by different authors (Sanghvi 1953; Cavalli-Sforza and Edwards 1967; Jukes and Cantor 1969; Nei 1972; Kimura 1980; Reynoldset al 1983; reviews in Felsenstein 1991; Nei and Kumar 2000). Most of these measures are actually dissimilarity measures and not mathematically true distance measures (B-Rao and Majumdar 1999). Independently, and much before the geneticists, statisticians too were concerned with the idea of distinguishing between two (statistical) populations. In order to discriminate between two populations on the basis of one or more characters, divergence measures like “Mahalanobis’D ² statistic” or “Mahalanobis’ generalized distance” (1936) and “Bhattacharyya’s distance” (1943, 1946), Kullback-Leibler’s divergence measure (1951) etc. have been proposed by statisticians. Mukherjee and Chattopadhyaya (1986) have mentioned measures based on distances, association between two attributes and discrimination function. There are similarities between the distance measures defined by applied scientists and by theoreticians. Felsenstein (1985) shows that three of the allele frequency-based genetic distance measures were anticipated by Bhattacharyya (1946). Nei and Takezaki (1994) have also studied the effectiveness of several genetic distance measures in the context of phylogenetic analysis, including Bhattacharyya’s distance measure.     

Fatty acid composition of odonate’s eyes

We have studied the fatty acid composition of eyes of amphibiotic insects, namely, the odonate Sympetrum flaveolum. The main polyunsaturated fatty acid of odonate’s eyes has been found to be 20:5n-3 (eicosapentaenoic fatty acid, EPA) rather than 18:2n-6 and 18:3n-3, which usually dominate in eyes of terrestrial insects, or 22:6n-3, which dominates in eyes of vertebrates. The prevalence of EPA in odonate’s eyes probably provides a more effective transmission of light signal in this animal compared to terrestrial insects. It is important for odonates because vision plays a decisive role in finding and catching prey.     

Racial,ethnic and religious social distance in Surinam: An exploration of the ‘strategic alliance hypothesis’ in a Caribbean community

The poly‐ethnic Caribbean can be seen as a laboratory for the study of the evolution of inter‐ and intra‐ethnic relationships. Using the Caribbean experience as context, the present study begins by focusing on the dynamics of Muslim‐Hindu relations in Surinam and then extends its analysis to South Asian‐Creole relations. Building on the work of van der Burg and van der Veer (1986), the study develops and examines a ‘strategic alliance hypothesis’: that Hindus and Muslims have avoided overt conflict in their Surinamese homeland in order to advance their common interests against the country's other major ethnic groups, and, by extension, South Asians have joined multi‐ethnic coalitions to advance these same interests. To explore these strategic alliance hypotheses, 376 secondary‐school students in western Surinam were administered a modified Bogardus (1925) social distance scale in order to measure the degree of reciprocal tolerance that the sample's respondents expressed towards Surinam's prominent ethno‐religious groups. The survey results offered qualified support for the strategic alliance hypothesis ‐ the degree of preferential closeness Hindus and Muslims in the sample would tolerate for each other fell approximately midway between the social distance they would allow between themselves and the Creoles, their major competitors, and the distance preferred for members of other sects within their own religion. These data are contextualized within Surinam's ongoing struggle to restore the independent and civilian constitutional government that was overthrown in a 1980 military coup.     

Methods in Primate Nutritional Ecology: A User’s Guide

An important goal of primatology is to identify the ecological factors that affect primate abundance, diversity, demography, and social behavior. Understanding the nutritional needs of primates is central to understanding primate ecology because adequate nutrition is a prerequisite for successful reproduction. Here, we review nutritional methods and provide practical guidelines to measure nutrient intake by primates in field settings. We begin with an assessment of how to estimate food intake by primates using behavioral observations. We then describe how to collect, prepare, and preserve food samples. Finally, we suggest appropriate nutritional assays for estimating diet nutritional quality and point to the merits and limitations of each. We hope this review will inspire primatologists to use nutritional ecology to answer many unresolved questions in primatology.     

Ecology of phlebotomine sand flies in the rural community of Mont Rolland (Thiès region, Senegal): area of transmission of canine leishmaniasis

Background

Different epidemiological studies previously indicated that canine leishmaniasis is present in the region of Thiès (Senegal). However, the risks to human health, the transmission cycle and particularly the implicated vectors are unknown.

Methodology/Principal Findings

To improve our knowledge on the population of phlebotomine sand flies and the potential vectors of canine leishmaniasis, sand flies were collected using sticky traps, light traps and indoor spraying method using pyrethroid insecticides in 16 villages of the rural community of Mont Rolland (Thiès region) between March and July 2005. The 3788 phlebotomine sand flies we collected (2044 males, 1744 females) were distributed among 9 species of which 2 belonged to the genus Phlebotomus: P. duboscqi (vector of cutaneous leishmaniasis in Senegal) and P. rodhaini. The other species belonged to the genus Sergentomyia: S. adleri, S. clydei, S. antennata, S. buxtoni, S. dubia, S. schwetzi and S. magna. The number of individuals and the species composition differed according to the type of trap, suggesting variable, species-related degrees of endophily or exophily. The two species of the genus Phlebotomus were markedly under-represented in comparison to the species of the genus Sergentomyia. This study also shows a heterogeneous spatial distribution within the rural community that could be explained by the different ecosystems and particularly the soil characteristics of this community. Finally, the presence of the S. dubia species appeared to be significantly associated with canine leishmaniasis seroprevalence in dogs.

Conclusions/Significance

Our data allow us to hypothesize that the species of the genus Sergentomyia and particularly the species S. dubia and S. schwetzi might be capable of transmitting canine leishmaniasis. These results challenge the dogma that leishmaniasis is exclusively transmitted by species of the genus Phlebotomus in the Old World. This hypothesis should be more thoroughly evaluated.     

The “Cycle of Life” in Ecology: Sergei Vinogradskii’s Soil Microbiology, 1885–1940

Historians of science have attributed the emergence of ecology as a discipline in the late nineteenth century to the synthesis of Humboldtian botanical geography and Darwinian evolution. In this essay, I begin to explore another, largely neglected but very important dimension of this history. Using Sergei Vinogradskii’s career and scientific research trajectory as a point of entry, I illustrate the manner in which microbiologists, chemists, botanists, and plant physiologists inscribed the concept of a “cycle of life” into their investigations. Their research transformed a longstanding notion into the fundamental approaches and concepts that underlay the new ecological disciplines that emerged in the 1920s. Pasteur thus joins Humboldt as a foundational figure in ecological thinking, and the broader picture that emerges of the history of ecology explains some otherwise puzzling features of that discipline – such as its fusion of experimental and natural historical methodologies. Vinogradskii’s personal “cycle of life” is also interesting as an example of the interplay between Russian and Western European scientific networks and intellectual traditions. Trained in Russia to investigate nature as a super-organism comprised of circulating energy, matter, and life; over the course of five decades – in contact with scientists and scientific discourses in France, Germany, and Switzerland – he developed a series of research methods that translated the concept of a “cycle of life” into an ecologically conceived soil science and microbiology in the 1920s and 1930s. These methods, bolstered by his authority as a founding father of microbiology, captured the attention of an international network of scientists. Vinogradskii’s conceptualization of the “cycle of life” as chemosynthesis, autotrophy, and global nutrient cycles attracted the attention of ecosystem ecologists; and his methods appealed to practitioners at agricultural experiment stations and microbiological institutes in the United States, Western Europe, and the Soviet Union.     

Prey, predators, parasites: intraguild predation or simpler community modules in disguise?

1.?Competition and predation are at the heart of community ecology. The theoretical concept of intraguild predation (IGP) combines these key interactions in a single community module. Because IGP is believed to be ubiquitous in nature, it has been subject to extensive research, and there exists a well-developed theoretical framework. 2.?We show that a general class of IGP models can be transformed to simpler, but equivalent community structures. This rather unexpected simplification depends critically on the property of 'indiscriminate predation', which we define broadly as the top-predator not distinguishing between its two different prey species. 3.?In a broader context, the great importance of IGP and of the simplifying transformation we report here is enhanced by the recent insight that the basic IGP structure extends naturally to host-parasitoid and host-pathogen communities. We show that parasites infecting prey (predators) tend to render IGP effectively into exploitative competition (tritrophic food chain, respectively). 4.?The equivalence between the original and simplified community module makes it possible to take advantage from already existing insights. We illustrate this by means of an eco-epidemiological IGP model that is strikingly similar to a classical exploitative competition model. 5.?The change of perspective on certain community modules may contribute to a better understanding of food web dynamics. In particular, it may help explain the interactions in food webs that include parasites. Given the ubiquity of parasitism, food webs may appear in a different light when they are transformed to their simplified analogue.     

Variation in composition of media and reagents used in the preparation of cell cultures from human and other animal tissues: Dulbecco’s,Earle’s,and Hanks’ balanced salt solutions

Summary When comparison was made of directions given for three salt solutions commonly used in cell culture preparations and identified as Dulbecco’s, Earle’s, and Hanks’, variations in composition were found. Some significantly alter the suitability of the materials for the intended use. Other differences may have less effect. This brief review reveals a tendency among researchers to follow procedures obtained from colleagues for the preparation of laboratory reagents and media, to cite the original publication rather than their colleagues’ work as the source of the information, and to fail to compare the two for differences. Some failures in cell culture propagation may be attributed to similar instances with other published but incorrectly cited work. Tables are provided that facilitate comparison of the correct original formulations with variants from selected published sources. This research was supported by Storrs Agricultural Experiment Station, University of Connecticut, Scientific Contribution Number 1032.     

Spatial heterogeneity of the species composition of a clavarioid fungi’s compex in the Eurasian Arctic

Using the example of a model group of macromycete (clavarioid fungi), a large-scale investigation into the mycological complex of the Eurasian Arctic is conducted. The species composition of clavarioid fungi’s complex is revealed in all longitudinal sectors and latitudinal subzones, and a comparative analysis is carried out. It has been determined that, among groups of aphyllophoroid fungi, the clavarioid life form is the most adapted to the extremally psychrophilic conditions of the Arctic. It is shown that the near-oceanic sectors are the richest, whereas the continental sectors are much poorer. The distribution of the species composition of fungi conforms to the similar distribution of flowering plants, especially hemicryptophytes. The average annual quantity of atmospheric precipitation is the leading climatic factor. The differences make it possible to subdivide the Eurasian Arctic into four mycogeographical regions: Atlantic (European), Siberian, Chukotian (Beringian), and High Arctic.     

The role of habitat in avian community composition: physiognomy or floristics?

Summary It has been proposed that within rather broad habitat types the distribution and abundance of bird species may be more closely associated with plant taxonomic composition than with the structure and configuration of the vegetation. Birds from a sample of eight representative grassland habitats in middle and western North America are consistent with this hypothesis. Over half (55%) of the variation in bird community composition was associated with floristic variation, but only a third (35%) was associated with physiognomy. Separating the interacting effects of floristics and physiognomy from each other served to accentuate the difference between them with respect to the avifauna. It is postulated that bird species/plant taxa associations, especially within similar habitat types, are mediated by the specific food resources that different plant taxa provide. Summary indices such as diversity measures obscure the taxonomic information content of plant or animal assemblages, and the use of such indices has likely impeded detection of the relationships described here.     

Phylogenetic distance–decay patterns are not explained by local community assembly processes in freshwater lake microbial communities

While water and sediment microbial communities exhibit pronounced spatio-temporal patterns in freshwater lakes, the underlying drivers are yet poorly understood. Here, we evaluated the importance of spatial and temporal variation in abiotic environmental factors for bacterial and microeukaryotic community assembly and distance–decay relationships in water and sediment niches in Hongze Lake. By sampling across the whole lake during both Autumn and Spring sampling time points, we show that only bacterial sediment communities were governed by deterministic community assembly processes due to abiotic environmental drivers. Nevertheless, consistent distance–decay relationships were found with both bacterial and microeukaryotic communities, which were relatively stable with both sampling time points. Our results suggest that spatio-temporal variation in environmental factors was important in explaining mainly bacterial community assembly in the sediment, possibly due lesser disturbance. However, clear distance–decay patterns emerged also when the community assembly was stochastic. Together, these results suggest that abiotic environmental factors do not clearly drive the spatial structuring of lake microbial communities, highlighting the need to understand the role of other potential drivers, such as spatial heterogeneity and biotic species interactions.     

Genetics,development and composition of the insect head – A beetle’s view

Many questions regarding evolution and ontogeny of the insect head remain open. Likewise, the genetic basis of insect head development is poorly understood. Recently, the investigation of gene expression data and the analysis of patterning gene function have revived interest in insect head development. Here, we argue that the red flour beetle Tribolium castaneum is a well suited model organism to spearhead research with respect to the genetic control of insect head development. We review recent molecular data and discuss its bearing on early development and morphogenesis of the head. We present a novel hypothesis on the ontogenetic origin of insect head sutures and review recent insights into the question on the origin of the labrum. Further, we argue that the study of developmental genes may identify the elusive anterior non-segmental region and present some evidence in favor of its existence. With respect to the question of evolution of patterning we show that the head Anlagen of the fruit fly Drosophila melanogaster and Tribolium differ considerably and we review profound differences of their genetic regulation. Finally, we discuss which insect model species might help us to answer the open questions concerning the genetic regulation of head development and its evolution.     

Elevational Distribution and Ecology of Small Mammals on Africa’s Highest Mountain

Mt Kilimanjaro is Africa’s highest mountain, and an icon for a country famous for its mammalian fauna. The distribution and abundance of small mammals on the mountain are poorly known. Here we document the distribution of shrews and rodents along an elevational gradient on the southeastern versant of Kilimanjaro. Five sites were sampled with elevational center points of 2000, 2500, 3000, 3500 and 4000 m, using a systematic methodology of standard traps and pitfall lines, to inventory the shrews and rodents of the slope. Sixteen species of mammal were recorded, including 6 shrew and 10 rodent species, and the greatest diversity of both was found at 3000 m, the elevational midpoint of the transect. No species previously unrecorded on Kilimanjaro were observed. Two genera of rodents that occur in nearby mountains (Hylomyscus and Beamys) were not recorded. Myosorex zinki, the only mammal endemic to Mt. Kilimanjaro, which previously was known by only a few specimens collected in the ericaceous or moorland habitat, was found in all but one (the lowest) of the sites sampled, and was one of the most widespread species of small mammal along the gradient. Two shrews (Crocidura allex and Sylvisorex granti) and one rodent (Dendromus insignis) were found throughout the entire transect, with Dendromus being observed at our highest trap point (4240 m). As in similar faunal surveys on other mountains of Tanzania, rainfall influenced the sample success of shrews, but not rodents. Trap success for rodents at 3500 m was notably low. This study contributes further justification for the conservation of the forest habitat of Mt. Kilimanjaro.     

Vegetation diversity, composition and structure in a cattle agro-landscape of Matiguás, Nicaragua

The diversity, composition and structure of vegetation in a cattle landscape in Matiguás, Nicaragua was characterized, and the floristic and structural differences of six types of habitats (secondary forests, riparian forests, charrales, live fences and pastures with high and low tree cover) were compared. A total of 3 949 trees of 180 species and 52 families were recorded. Forty six percent of the total trees reported for the landscape were represented by Guazuma ulmifolia (18.5%), Bursera simaruha (13.2%), Tabebuia rosea (6.3%), Enterolobium cyclocarpum (4.2%) and Albizia saman (3.4%). Many of the dominant species in the landscape were typical of open and disturbed areas. There were significant differences between the different habitats in the patterns of tree species richness, abundance, diversity, structure and floristic composition. The riparian forests had greater tree richness (p=0.0001) and diversity (p=0.0009) than other habitats. The floristic composition varied across habitats. with pairs of habitats sharing between 18.4 and 51.6% of the same tree species, and with clear differences in composition between the forested (riparian and secondary forests) and agricultural habitats. Of the habitats studied, the riparian forests and secondary forests seem to have greatest value for the conservation of the flora in the agropaisaje because they have the greatest species richness, and maintain small populations of endangered species. On the basis of the study, we recommend including agricultural landscapes in strategies to conserve tree diversity and suggest measures to ensure the maintenance of tree diversity in the Matiguas landscape.     

Mosquitoes and transmission of malaria parasites – not just vectors

The regional malaria epidemics of the early 1900s provided the basis for much of our current understanding of malaria epidemiology. Colonel Gill, an eminent malariologist of that time, suggested that the explosive nature of the regional epidemics was due to a sudden increased infectiousness of the adult population. His pertinent observations underlying this suggestion have, however, gone unheeded. Here, the literature on Plasmodium seasonal behaviour is reviewed and three historical data sets, concerning seasonal transmission of Plasmodium falciparum, are examined. It is proposed that the dramatic seasonal increase in the density of uninfected mosquito bites results in an increased infectiousness of the human reservoir of infection and, therefore, plays a key role in "kick-starting" malaria parasite transmission.     

Ecology and origin of the introduced cichlid Acarichthys heckelii in Singapore’s fresh waters—first instance of establishment

The South American cichlid fish, Acarichthys heckelii, is one of many exotic species established in Singapore’s artificial freshwater habitat; forming the only recorded population outside its native distribution. The discovery of an A. heckelii individual in a sensitive natural waterway (Nee Soon Swamp Forest) prompted this study, which aimed to investigate the distribution, diet, growth and reproductive ecology of the fish, as well as its possible route of introduction. We found that A. heckelii is largely restricted to artificial freshwater bodies, although a sizable established population occurs in a modified waterway connected to Nee Soon Swamp Forest. Gut contents revealed that the fish fed mainly on benthic algae and macroinvertebrates, the latter occurring in higher frequencies in larger individuals. While unable to ascertain clear seasonality in its breeding, we observed a peak in reproductive investment coinciding with the Northeast monsoon, indicating possible life history adaptations. Genetic comparisons of the cytochrome b mitochondrial marker between individuals from South America, Singapore and the ornamental fish trade shows that the A. heckelii populations in Singapore’s fresh waters are more closely related to fishes in the ornamental fish trade than the native population in South America, corroborating anecdotal evidences identifying aquarists as the source of local releases. Our findings also demonstrate the viability of the ornamental trade as an avenue of species introduction and the potential invasiveness of A. heckelii.