Normal expression of the viral gene N interferes with growth of bacteriophage lambda in Escherichia coli 15T-.

Summary Growth of and of some lambdoid phages is considerably inhibited on strain 3057 derived from E. coli 15T^-. Mutants of which overcome this inhibition map in gene N. Some of these hty mutants are temperature sensitive for growth on E. coli K12. Thus plating of on strain 3057 allows one to isolate temperature sensitive N mutants. The hty mutants produce less than normal N activity as judged by their low efficiency of plating on a nus ^- host and by the extended latent period of some of them on normal hosts. The inability of strain 3057 to propagate can be at least partially reversed by addition of thymidine to the medium and the growth difference between hty and in 3057 increases with decreasing thymidine concentration. The amount of DNA produced by in 3057 at low thymidine concentration is lower than that produced by hty under the same conditions. Only a small percentage of the DNA produced by in 3057 is packaged into viable phage particles. This suggests that not only produces less DNA in 3057 than hty but that an important part of the DNA in 3057 is in a form which can not be packaged or which is noninfective for other reasons. A hypothesis is discussed that hty mutations enable to grow on E. coli 15T^- at low thymidine concentration because they lead to reduction in the number of single strand nicks in the DNA by reducing the intracellular endonuclease activity. Under permissive conditions conditional lethal N mutants are favored for growth on 3057 over N ⁺ which confirms the idea that N activity or the activity of a gene under N control interferes with growth in 3057 at low thymidine concentration.     

Four mutants of Micrococcus radiodurans defective in the ability to repair DNA damaged by mitomycin-C, two of which have wild-type resistance to ultraviolet radiation

Summary Four genes concerned with the resistance of wild-type Micrococcus radiodurans to the lethal action of mitomycin-C (MTC), mtcA, mtcB, uvsA and uvsB, have been identified by isolating mutants sensitive to MTC.Two strains of M. radiodurans, 302 and 262 carrying mutations in mtcA and mtcB respectively, are between forty and sixty times as sensitive as the wild-type to MTC, only slightly more sensitive than the wild-type to ionizing () radiation and have the same resistance as the wild-type to ultraviolet (u.v.) radiation. Strain 302 can be transformed at a high frequency to wild-type resistance to MTC with DNA from strain 262, and vice versa, indicating that mtcA and mtcB have different genetic locations.Two further strains of M. radiodurans, 303 and 263 having mutations in uvsA and uvsB respectively are only from four to eight times as sensitive as the wild-type to MTC, seven to thirteen times as sensitive to -radiation but between twenty to thirty-three times as sensitive to u.v. radiation. Strain 303 can be transformed with DNA from strain 263, or vice versa, to wild-type resistance to u.v. radiation, implying that uvsA and uvsB also have different genetic locations. M. radiodurans strain 301 which is mutant in both mtcA and uvsA, and strain 261 which is mutant in mtcB and uvsB are twenty to forty times as sensitive as the wild-type to both MTC and u.v. radiation and seven to ten times as sensitive to radiation. Neither mtcA and uvsA nor mtcB and uvsB are closely linked.None of the mutant strains is deficient in recombination, as measured by transformation. The repair of MTC-induced DNA damage in M. radiodurans must be different from that described for Escherichia coli.     

Differential tolerance of high manganese among rapeseed genotypes

Cultivation of crop cultivars resistant to high soil manganese (Mn) may reduce the negative effects of Mn toxicity on crop yield. Three studies were carried out to select Brassica genotypes (B. napus and B. rapa) resistant to high Mn concentration and to characterise the nature of any Mn resistance found. In Experiment 1, 33 B. napus and nine B. rapa genotypes were screened in a sub-irrigated nutrient solution system. Based on visual symptoms and plant size, single plants were identified with resistance to high Mn from within cultivars of four B. napus and one B. rapa. Resistance was also identified in one B. napus doubled haploid genotype. In Experiment 2, a genotype resistant to high Mn and two genotypes (progenies from Experiment 1) sensitive to high Mn were exposed to eight Mn concentrations (9–500 M) for 2 weeks in nutrient solution. The relative shoot weight (RSW) and the relative root weight (RRW) of the genotype resistant to Mn were significantly greater at 100 M Mn than both genotypes sensitive to high Mn; the sensitive genotypes reacted similarly. The three genotypes had similar tissue Mn contents and the elevated Mn tissue contents did not induce deficiencies of Mg or Fe. In Experiment 3, 12 genotypes (progenies from Experiment 1) were screened in nutrient solution at 9 M Mn and with an additional 125 M Mn. The RRW and RSW of the genotypes ranged from 35 to 114 and 39 to 94%, respectively. All the selections sensitive to high Mn had a RSW <60% and thus were confirmed to be Mn sensitive, while all the selections resistant to Mn had a RSW >70% and thus were confirmed as Mn resistant. This evidence confirmed the availability of rapeseed germplasm resistant to Mn toxicity with an ability to withstand high content of Mn through internal tissue tolerance. Also, the observed Mn tolerance in this material is genetically controlled and not an artifact of our screening assays.     

A highly-sensitive rice seedling bioassay for the detection of femtomole quantities of 3β-hydroxylated gibberellins

A very sensitive and specific bioassay using prohexadione calcium [BX-112, which blocks 2- and 3-hydroxylation of gibberellins (GAs)] with uniconazole (which blocks oxidation of ent-kaurene, ent-kaurenol and ent-kaurenal) in a microdrop assay was developed for several rice (Oryza sativa L.) varieties, including cv. Waito-C, which is already specific to 3-hydroxylated GAs. The sensitivity and specificity of cvs. Waito-C, Tan-ginbozu and Koshihikari to 3-hydroxylated GAs was greatly enhanced by treatment of the seeds with a combination of 40 mM prohexadione calcium and 80 M uniconazole. The minimum detectable doses of 3-hydroxylated GAs (GA₁, GA₃, GA₄ and GA₇) in the three cultivars treated with both chemicals were 1 to 10 fmol (i.e. ca. 350 fg to 3.5 pg) per plant. This is equal to 30-fold more sensitive than Waito-C treated with uniconazole alone, and 30 to 1000-fold more sensitive than Waito-C with no growth retardant soak. Minimum detectable doses of 3-nonhydroxylated GAs (GA₉, GA₁₉ GA₂₀) and GAs with very low biological activity (GA₈ and GA₁₇) were equal to or more than 1000 fmol per plant. This is about equal to the activity in Waito-C treated with uniconazole alone. Application of this assay to an extract from Raphanus sativus was compared with the data by gas chromatography/mass spectrometry (GC/MS), confirming the conclusions reached using authentic test GAs, namely that use of uniconazole plus BX-112 appreciably enhanced the detection sensitivity to fractions shown by GC/MS to contain GA₁ and GA₄, both 3-hydroxylated GAs.Abbreviations GA gibberellin - BX-112 prohexadione calcium     

Non-radioactive assay and HPLC analysis of cephalosporin C 7α-methoxylation by cell-free extracts of Streptomyces clavuligerus

Summary Escherichia coli W3110 was found to be 50 times more sensitive to cephamycin C than to cephalosporin C, and also markedly more sensitive to 7-methoxycephalosporin C than to 7-hydroxycephalosporin C. Accordingly, this organism could be used to establish a bioassay of cephalosporin C 7-methoxylation by a Streptomyces clavuligerus cell-free extract. The bioassay results were complemented by HPLC analysis. Modification of the mobile phase from 100 mm NaH₂PO₄, pH 4.2, to 200 mm, pH 4.0, improved HPLC resolution such that an unidentified peak could be separated from the 7-hydroxycephalosporin C peak, and the formation of this intermediate as well as the product, 7-methoxycephalosporin C, could be directly measured in the cell-free reaction system. Offprint requests to: A. L. Demain     

Studies on radiation-sensitive mutants of E. coli. II. Breakage and repair of ultraviolet irradiated intracellular DNA of phage lambda

Summary It has been shown that linear DNA molecules of phage are converted to the twisted circular structure (species I) by covalent closure of the both strands at the cohesive ends after infection to the immune bacteria and that the twisted circular molecules are transformed to the circular form (species II) by a single-strand break in one of the strands of their DNA. This system offers a very sensitive method to study on the strand breaks or their repair. For characterization of the defects of ultraviolet sensitive strains, the structural changes of ultraviolet irradiated DNA in these strains were studied.Ultraviolet irradiation to phage greatly reduced the extent of conversion of the molecules to the species I in the uvrD mutant while the irradiation showed little effect on the conversion in the uvrA, B and C mutants. When infected bacteria carrying species I molecules were irradiated, the species I molecules in the uvrD mutant were disrupted while most of the molecules in the uvrA, B and C mutants kept the structure. These results indicate that in the irradiated DNA strand breaks are rarely introduced or, if introduced, repaired rapidly in the uvrA, B and C mutants and they are introduced in the uvrD mutant leading to the degradation of the DNA. These results provide a firm evidence that the defect of the uvrD mutant is different from other Her^- mutants and in the process of repair synthesis.Ultraviolet irradiation to the uvrD mutants promote the formation of the species I molecules from the infected irradiated -DNA.Such effect was not observed with the uvrA mutant. Since the uvrD mutant has UV reactivation capacity and the uvrA mutant has not, the above phenomenon is probably caused by UV reactivation and may provide a more direct method to study the mechanisms of UV reactivation than the plaque assay.Abbreviations used UV Ultraviolet light - UVr Ultraviolet light reactivation This work was aided in part by a research grant GM 08384 from the United States Public Health Service.     

Electrophysiological measurements of spectral mechanisms in the retinas of two cervids: white-tailed deer (Odocoileus virginianus) and fallow deer (Dama dama)

Electroretinogram (ERG) flicker photometry was used to study the spectral mechanisms in the retinas of white-tailed deer (Odocoileus virginianus) and fallow deer (Dama dama). In addition to having a rod pigment with maximum sensitivity (_max) of about 497 nm, both species appear to have two classes of photopic receptors. They share in common a short-wavelength-sensitive cone mechanism having _max in the region of 450–460 nm. Each also has a cone having peak sensitivity in the middle wavelengths, but these differ slightly for the two species. In white-tailed deer the _max of this cone is about 537 nm; for the fallow deer the average _max value for this mechanism was 542 nm. Deer resemble other ungulates and many other types of mammal in having two classes of cone pigment and, thus, the requisite retinal basis for dichromatic color vision.Abbreviations ERG electroretinogram - LWS long wavelength sensitive - MWS middle wavelength sensitive - SWS short wavelength sensitive     

Different sensitivities of T4D and lambda mutants to photodynamic action

Summary While T4D phages and both T4v and T4v₁x mutants are equally sensitive to photodynamic action, T4x mutants are much more sensitive. It is proposed that T4x mutants undergo an abortive repair process involving action of the nuclease coded by the v gene.Lambda redB mutants deficient in protein are much more sensitive to photodynamic action than wildtype phages and redA mutants. On the other hand lambda redA mutants, which do not produce the phage-specific exonuclease, are much more sensitive to U.V. light than wildtype phages and redB mutants.These results were presented in an abstracted version at the V. International U.V.-Colloquium Grundlagen der UV-Wirkung, Kühlungsborn, DDR, in October 1969.     

A measure of response to perturbation used to assess structural change in some polluted and unpolluted stream fish communities

Summary A new method for measuring structural change in sets of species which have been subjected to natural or experimental perturbation is developed and is shown to be superior to static diversity and evenness measures for this purpose. Three parameters, H, J, and X;} are shown to provide necessary and sufficient information on the severity of a perturbation as well as the uniformity of its effect on all species in the set. When positive and negative changes in species abundance are considered separately, the method is sensitive to compensatory changes which are not detected by static measures.The parameters are then calculated for some data sets on polluted and unpolluted fish communities in second and third order streams from the Clemons Fork watershed in eastern Kentucky. Results indicate that H, the diversity of change over two sampling seasons, is high for perturbed and unperturbed systems, but J the eveness of change is lower for the communities which were polluted in the second sampling season. Severe pollution results in the suppression of most major fish species, whereas more moderate pollution results in a large number of compensatory changes. The biological basis for such an outcome is discussed, and the notion of these three parameters as the vital signs of a healthy ecosystem is presented.     

Correlation between decreased reparative capability of UV lesions and higher spontaneous mutability in a mutator strain of E. coli K-12

Summary The biauxotrophic strain of E. coli K-12 (), met 1/his 7, which exhibits an 8 times higher rate of met1met ⁺-backmutation as compared with the parent strain met 1, was found to be also more sensitive to UV irradiation. In addition, the maximum UV induction of prophage occurs at lower doses, and the capacity of the strain to propagate induced prophage is reduced. The mutant strain has also lost part of the ability to repair UV-induced lesions in phage T 1.The phenotypes high mutability and UV sensitivity could not be separated by means of recombination.From these findings it is concluded that part of the spontaneously occuring changes in DNA (premutations) which lead to met ⁺ genotype are similarly repaired as some UV induced ones, and that the mutator mum ⁺ of strain met 1/his 7 causes a reduced repair of both changes.     

Immunity and resistance to the KP6 toxin of Ustilago maydis

Summary The KP6 toxin of Ustilago maydis, encoded by segmented double-stranded (ds) RNA viruses, is lethal to sensitive strains of the same species and related species. The toxin consists of two polypeptides, and , synthesized as a single preprotoxin, which are not covalently linked. Neither polypeptide alone is toxic, but killer activity can be restored by in vitro and in vivo complementation. Killer-secreting strains are resistant to the toxin they produce. Resistance is conferred by a single recessive nuclear gene. This study describes a search for cytoplasmic factors that may confer resistance, also referred to as immunity. The approaches used to detect cytoplasmic immunity included transmission of dsRNA and transmission of virus particles to sensitive cells by cytoduction, cytoplasmic mixing in diploids and infection with viruses. An alternative approach was also used to express cloned cDNAs of the KP6 toxin-encoding dsRNA and of the and polypeptides. The results indicated that no immunity to KP6 can be detected. While KP6, and polypeptides were expressed by resistant cells, neither KP6 nor were expressed in sensitive strains. The polypeptide was expressed in sensitive cells, but it did not confer immunity. These results suggest that neither the preprotoxin nor the or polypeptides confer immunity and thus may be the toxic component of the binary toxin.     

Fluorescence studies of normal and sickle beta apohemoglobin self-association

The acrylamide quenching of the intrinsic tryptophanyl fluorescence of normal and sickle apohemoglobins has been studied in 0.05 M potassium phosphate buffer,pH 7.5, at 5°C over a protein concentration range from 1 to 50M. Analysis of quenching dynamics revealed a strong dependence on acrylamide concentration for the intrinsic fluorescence of both normal and sickle apohemoglobins, suggesting that one tryptophanyl residue [presumably that at position 37(C3)], was more accessible to collisional quencher than the other tryptophanyl residue [15(A12)]. Additional studies, which altered viscosity and subunit assembly experimental parameters, supported the assignment of residue 37 as the more dynamically accessible residue. Finally, the quenching data were also found to be dependent on protein concentration, implying that this difference in the mobility between the two residues is a sensitive probe of self-aggregation. Extrapolated dynamic quenching constants at low concentration of acrylamide were used to estimate the dimer-monomer equilibrium dissociation constants of normal and sickle apohemoglobins, and were found to be 5.6 and 2.4M, respectively, thus demonstrating distinct self-association properties of _A and _S apohemoglobins.     

A microchemical method for detecting antifungal substances

Summary A microchemical method for detecting inhibitors of fungal grwoth has been devised. The procedure involves the determination of mycelium production by use of acidified potassium dichromate. The method is rapid, reproducible and is sensitive to the antifungal antibiotic, actidione, in concentrations of less than 0.10 g./ml. when Fusarium oxysporum f. cubense is used as the test organism.Agronomy Paper No. 450. This work was supported in part by a grant from the United Fruit Company, Boston, Massachusetts.     

Absorption of pentachlorophenol (PCP) by bark chips and its role in microbial PCP degradation

A pentachlorophenol (PCP)-degrading mixed bacterial population was enriched in a biofilter filled with soft wood bark chips. We found that bark chips were essential for the degradation to proceed at PCP concentrations higher than 10M. PCP-degrading bacteria were found to be extremely sensitive to PCP. Bark chips absorbed PCP reversibly, thus detoxifying the medium and allowing degradation to proceed at higher concentrations of PCP (beyond 200M).     

In vitro synthesis and repression of argininosuccinase in Escherichia coli K12; partial purification of the arginine repressor

Summary 80dargECBH DNA has been used to direct cell-free synthesis of argininosuccinase, the argH gene product in Escherichia coli K12. In vitro enzyme synthesis is sensitive to repression by partially purified preparations from an argR ⁺ strain but not by corresponding preparations from an argR ^- strain. Using DNA-cellulose chromatography, approximately seventyfold purification of repressor has been obtained. The partially purified preparation represses argininosuccinase synthesis but has no effect on -galactosidase synthesis.     

Repressor and rex product of coliphage lambda: lack of collaboration and joint controls

Summary Exposure to 41° C for 10 to 100 minutes rapidly inactivates repressor bearing several ts mutations in the A or B region of gene cI, but does not result in simultaneous rapid loss of the rex function, which restricts phage T4 rII. One may conclude that the rex product does not directly collaborate with the repressor protein. Immediate loss of the rex activity at 47.5° C, observed with most of the cIts mutants and even cI⁺, appears to be unrelated to the repressor inactivation. In tof ⁺ lysogens carrying nonlethal cIts prophage mutants, the prolongation of induction at 41° C ultimately results in irreversible loss of the rex function, but only after about six cell generations. In similar experiments with tof deficient lysogens, loss of the rex activity requires about eleven cell generations and the rex function is regained in less than 30 minutes after return of the lysogen to 30° C. Two methods of rex assay, the more sensitive phage yield method and the infective center method, were employed.