Nitrogen addition reduces soil respiration in a mature tropical forest in southern China

Response of soil respiration (CO₂ emission) to simulated nitrogen (N) deposition in a mature tropical forest in southern China was studied from October 2005 to September 2006. The objective was to test the hypothesis that N addition would reduce soil respiration in N saturated tropical forests. Static chamber and gas chromatography techniques were used to quantify the soil respiration, following four‐levels of N treatments (Control, no N addition; Low‐N, 5 g N m^?2 yr^?1; Medium‐N, 10 g N m^?2 yr^?1; and High‐N, 15 g N m^?2 yr^?1 experimental inputs), which had been applied for 26 months before and continued throughout the respiration measurement period. Results showed that soil respiration exhibited a strong seasonal pattern, with the highest rates found in the warm and wet growing season (April–September) and the lowest rates in the dry dormant season (December–February). Soil respiration rates showed a significant positive exponential relationship with soil temperature, whereas soil moisture only affect soil respiration at dry conditions in the dormant season. Annual accumulative soil respiration was 601±30 g CO₂‐C m^?2 yr^?1 in the Controls. Annual mean soil respiration rate in the Control, Low‐N and Medium‐N treatments (69±3, 72±3 and 63±1 mg CO₂‐C m^?2 h^?1, respectively) did not differ significantly, whereas it was 14% lower in the High‐N treatment (58±3 mg CO₂‐C m^?2 h^?1) compared with the Control treatment, also the temperature sensitivity of respiration, Q₁₀ was reduced from 2.6 in the Control with 2.2 in the High‐N treatment. The decrease in soil respiration occurred in the warm and wet growing season and were correlated with a decrease in soil microbial activities and in fine root biomass in the N‐treated plots. Our results suggest that response of soil respiration to atmospheric N deposition in tropical forests is a decline, but it may vary depending on the rate of N deposition.     

Soil–atmosphere exchange of CH4, CO,N2O and NOx and the effects of land‐use change in the semiarid Mallee system in Southeastern Australia

The semiarid and arid zones cover a quarter of the global land area and support one‐fifth of the world's human population. A significant fraction of the global soil–atmosphere exchange for climatically active gases occurs in semiarid and arid zones yet little is known about these exchanges. A study was made of the soil–atmosphere exchange of CH₄, CO, N₂O and NO_x in the semiarid Mallee system, in north‐western Victoria, Australia, at two sites: one pristine mallee and the other cleared for approximately 65 years for farming (currently wheat). The mean (± standard error) rates of CH₄ exchange were uptakes of ?3.0 ± 0.5 ng(C) m^?2 s^?1 for the Mallee and ?6.0 ± 0.3 ng(C) m^?2 s^?1 for the Wheat. Converting mallee forest to wheat crop increases CH₄ uptake significantly. CH₄ emissions were observed in the Mallee in summer and were hypothesized to arise from termite activity. We find no evidence that in situ growing wheat plants emit CH₄, contrary to a recent report. The average CO emissions of 10.1 ± 1.8 ng(C) m^?2 s^?1 in the Mallee and 12.6 ± 2.0 ng(C) m^?2 s^?1 in the Wheat. The average N₂O emissions were 0.5 ± 0.1 ng(N) m^?2 s^?1 from the pristine Mallee and 1.4 ± 0.3 ng(N) m^?2 s^?1 from the Wheat. The experimental results show that the processes controlling these exchanges are different to those in temperate systems and are poorly understood.     

Role of six European tree species and land‐use legacy for nitrogen and water budgets in forests

Water and nutrient fluxes for single stands of different tree species have been reported in numerous studies, but comparative studies of nutrient and hydrological budgets of common European deciduous tree species are rare. Annual fluxes of water and inorganic nitrogen (N) were established in a 30‐year‐old common garden design with stands of common ash (Fraxinus excelsior), European beech (Fagus sylvatica L.), pedunculate oak (Quercus robur), small‐leaved lime (Tilia cordata Mill.), sycamore maple (Acer pseudoplatanus) and Norway spruce (Picea abies [L.] Karst.) replicated at two sites in Denmark, Mattrup and Vallø during 2 years. Mean annual percolation below the root zone (mm yr^?1±SE, n=4) ranked in the following order: maple (351±38)>lime (284±32), oak (271±25), beech (257±30), ash (307±69)? spruce (75±24). There were few significant tree species effects on N fluxes. However, the annual mean N throughfall flux (kg N ha^?1 yr^?1±SE, n=4) for spruce (28±2) was significantly larger than for maple (12±1), beech (11±1) and oak (9±1) stands but not different from that of lime (15±3). Ash had a low mean annual inorganic N throughfall deposition of 9.1 kg ha^?1, but was only present at Mattrup. Annual mean of inorganic N leaching (kg ha^?1 yr^?1±SE, n=4) did not differ significantly between species despite of contrasting tree species mean values; beech (25±9)>oak (16±10), spruce (15±8), lime (14±8)? maple (1.9±1), ash (2.0±1). The two sites had similar throughfall N fluxes, whereas the annual leaching of N was significantly higher at Mattrup than at Vallø. Accordingly, the sites differed in soil properties in relation to rates and dynamics of N cycling. We conclude that tree species affect the N cycle differently but the legacy of land use exerted a dominant control on the N cycle within the short‐term perspective (30 years) of these stands.     

Ecosystem–atmosphere exchange of CH4 and N2O and ecosystem respiration in wetlands in the Sanjiang Plain, Northeastern China

Natural wetlands are critically important to global change because of their role in modulating atmospheric concentrations of CO₂, CH₄, and N₂O. One 4‐year continuous observation was conducted to examine the exchanges of CH₄ and N₂O between three wetland ecosystems and the atmosphere as well as the ecosystem respiration in the Sanjiang Plain in Northeastern China. From 2002 to 2005, the mean annual budgets of CH₄ and N₂O, and ecosystem respiration were 39.40 ± 6.99 g C m^?2 yr^?1, 0.124 ± 0.05 g N m^?2 yr^?1, and 513.55 ± 8.58 g C m^?2 yr^?1 for permanently inundated wetland; 4.36 ± 1.79 g C m^?2 yr^?1, 0.11 ± 0.12 g N m^?2 yr^?1, and 880.50 ± 71.72 g C m^?2 yr^?1 for seasonally inundated wetland; and 0.21 ± 0.1 g C m^?2 yr^?1, 0.28 ± 0.11 g N m^?2 yr^?1, and 1212.83 ± 191.98 g C m^?2 yr^?1 for shrub swamp. The substantial interannual variation of gas fluxes was due to the significant climatic variability which underscores the importance of long‐term continuous observations. The apparent seasonal pattern of gas emissions associated with a significant relationship of gas fluxes to air temperature implied the potential effect of global warming on greenhouse gas emissions from natural wetlands. The budgets of CH₄ and N₂O fluxes and ecosystem respiration were highly variable among three wetland types, which suggest the uncertainties in previous studies in which all kinds of natural wetlands were treated as one or two functional types. New classification of global natural wetlands in more detailed level is highly expected.     

In situ litter decomposition and litter quality in a Mojave Desert ecosystem: effects of elevated atmospheric CO2 and interannual climate variability

Rising atmospheric CO₂ has been predicted to reduce litter decomposition as a result of CO₂‐induced reductions in litter quality. However, available data have not supported this hypothesis in mesic ecosystems, and no data are available for desert or semi‐arid ecosystems, which account for more than 35% of the Earth's land area. The objective of our study was to explore controls on litter decomposition in the Mojave Desert using elevated CO₂ and interannual climate variability as driving environmental factors. In particular, we sought to evaluate the extent to which decomposition is modulated by litter chemistry (C:N) and litter species and tissue composition. Naturally senesced litter was collected from each of nine 25 m diameter experimental plots, with six plots exposed to ambient [CO₂] or 367 μL CO₂ L^?1 and three plots continuously fumigated with elevated [CO₂] (550 μL CO₂ L^?1) using FACE technology beginning in April 1997. All litter collected in 1998 (a wet, or El Niño year; 306 mm precipitation) was pooled as was litter collected in 1999 (a dry year; 94 mm). Samples were allowed to decompose for 4 and 12 months starting in May 2001 in mesh litterbags in the locations from which litter was collected. Decomposition of litter produced under elevated CO₂ and ambient CO₂ did not differ. Litter produced in the wetter year showed more rapid initial decomposition (over the first 4 months) than that produced in the drier year (27±2% yr^?1 or 7.8±0.7 g m^?2 yr^?1 for 1998 litter; 18±3% yr^?1 or 2.2±0.4 g m^?2 yr^?1 for 1999 litter). C:N ratios of litter produced under elevated CO₂ (wet year: 37±0.5; dry year: 42±2.5) were higher than those of litter produced under ambient CO₂ (wet year: 34±1.1; dry year: 35±1.4). Litter production in the wet year (amb. CO₂: 25.1±1.1 g m^?2 yr^?1; elev. CO₂: 35.0±1.1 g m^?2 yr^?1) was more than twice as high as that in the dry year (amb. CO₂: 11.6±1.7 g m^?2, elev. CO₂: 13.3±3.4 g m^?2), and contained a greater proportion of Lycium pallidum and a lower proportion of Larrea tridentata than litter produced in the dry year. Decomposition, viewed across all treatments, decreased with increasing C:N ratios, decreased with increasing proportions of Larrea tridentata and increased with increasing proportions of Lycium pallidum and Lycium andersonii. Because litter C:N did not vary by litter production year, and CO₂ did not alter decomposition or litter species/tissue composition, it is likely that the impact of year‐to‐year variation in precipitation on the proportion of key plant species in the litter may be the most important way in which litter decomposition will be modulated in the Mojave Desert under future rising atmospheric CO₂.     

Feasibility of Typha Latifolia for High Salinity Effluent Treatment in Constructed Wetlands for Integration in Resource Management Systems

High salinity wastewaters have limited treatment options due to the occurrence of salt inhibition in conventional biological treatments. Using recirculating marine aquaculture effluents as a case study, this work explored the use of Constructed Wetlands as a treatment option for nutrient and salt loads reduction. Three different substrates were tested for nutrient adsorption, of which expanded clay performed better. This substrate adsorbed 0.31 mg kg^?1 of NH₄ ⁺?N and 5.60 mg kg^?1 of PO₄ ^3??P and 6.9 mg kg^?1 dissolved salts after 7 days of contact. Microcosms with Typha latifolia planted in expanded clay and irrigated with aquaculture wastewater (salinity 2.4%, 7 days hydraulic retention time, for 4 weeks), were able to remove 94% NH₄ ⁺?N (inlet 0.25 ± 0.13 mg L^?1), 78% NO₂ ^??N (inlet 0.78 ± 0.62 mg L^?1), 46% NO₃ ^??N (inlet 18.83 ± 8.93 mg L^?1) whereas PO₄ ^3??P was not detected (inlet 1.41 ± 0.21 mg L^?1). Maximum salinity reductions of 52% were observed. Despite some growth inhibition, plants remained viable, with 94% survival rate. Daily treatment dynamics studies revealed rapid PO₄ ^3??P adsorption, unbalancing the N:P ratio and possibly affecting plant development. An integrated treatment approach, coupled with biomass valorization, is suggested to provide optimal resource management possibilities.     

Modeling to discern nitrogen fertilization impacts on carbon sequestration in a Pacific Northwest Douglas‐fir forest in the first‐postfertilization year

This study investigated how nitrogen (N) fertilization with 200 kg N ha^?1 of urea affected ecosystem carbon (C) sequestration in the first‐postfertilization year in a Pacific Northwest Douglas‐fir (Pseudotsuga menziesii) stand on the basis of multiyear eddy‐covariance (EC) and soil‐chamber measurements before and after fertilization in combination with ecosystem modeling. The approach uses a data‐model fusion technique which encompasses both model parameter optimization and data assimilation and minimizes the effects of interannual climatic perturbations and focuses on the biotic and abiotic factors controlling seasonal C fluxes using a prefertilization 9‐year‐long time series of EC data (1998–2006). A process‐based ecosystem model was optimized using the half‐hourly data measured during 1998–2005, and the optimized model was validated using measurements made in 2006 and further applied to predict C fluxes for 2007 assuming the stand was not fertilized. The N fertilization effects on C sequestration were then obtained as differences between modeled (unfertilized stand) and EC or soil‐chamber measured (fertilized stand) C component fluxes. Results indicate that annual net ecosystem productivity in the first‐post‐N fertilization year increased by～83%, from 302 ± 19 to 552 ± 36 g m^?2 yr^?1, which resulted primarily from an increase in annual gross primary productivity of～8%, from 1938 ± 22 to 2095 ± 29 g m^?2 yr^?1 concurrent with a decrease in annual ecosystem respiration (R_e) of～5.7%, from 1636 ± 17 to 1543 ± 31 g m^?2 yr^?1. Moreover, with respect to respiration, model results showed that the fertilizer‐induced reduction in R_e (～93 g m^?2 yr^?1) principally resulted from the decrease in soil respiration R_s (～62 g m^?2 yr^?1).     

Dimeric chlorite dismutase from the nitrogen‐fixing cyanobacterium Cyanothece sp. PCC7425

It is demonstrated that cyanobacteria (both azotrophic and non‐azotrophic) contain heme b oxidoreductases that can convert chlorite to chloride and molecular oxygen (incorrectly denominated chlorite ‘dismutase’, Cld). Beside the water‐splitting manganese complex of photosystem II, this metalloenzyme is the second known enzyme that catalyses the formation of a covalent oxygen–oxygen bond. All cyanobacterial Clds have a truncated N‐terminus and are dimeric (i.e. clade 2) proteins. As model protein, Cld from Cyanothece sp. PCC7425 (CCld) was recombinantly produced in Escherichia coli and shown to efficiently degrade chlorite with an activity optimum at pH 5.0 [k_cat 1144 ± 23.8 s^?1, K_M 162 ± 10.0 μM, catalytic efficiency (7.1 ± 0.6) × 10⁶ M^?1 s^?1]. The resting ferric high‐spin axially symmetric heme enzyme has a standard reduction potential of the Fe(III)/Fe(II) couple of ?126 ± 1.9 mV at pH 7.0. Cyanide mediates the formation of a low‐spin complex with k_on = (1.6 ± 0.1) × 10⁵ M^?1 s^?1 and k_off = 1.4 ± 2.9 s^?1 (K_D ～ 8.6 μM). Both, thermal and chemical unfolding follows a non‐two‐state unfolding pathway with the first transition being related to the release of the prosthetic group. The obtained data are discussed with respect to known structure–function relationships of Clds. We ask for the physiological substrate and putative function of these O₂‐producing proteins in (nitrogen‐fixing) cyanobacteria.     

Comparison of measured and EF5-r-derived N2O fluxes from a spring-fed river

There is considerable uncertainty in the estimates of indirect N₂O emissions as defined by the Intergovernmental Panel on Climate Change's (IPCC) methodology. Direct measurements of N₂O yields and fluxes in aquatic river environments are sparse and more data are required to determine the role that rivers play in the global N₂O budget. The objectives of this research were to measure the N₂O fluxes from a spring‐fed river, relate these fluxes to the dissolved N₂O concentrations and NO₃‐N loading of the river, and to try to define the indirect emission factor (EF5‐r) for the river. Gas bubble ebullition was observed at the river source with bubbles containing 7.9 μL N₂O L^?1. River NO₃‐N and dissolved N₂O concentrations ranged from 2.5 to 5.3 mg L^?1 and 0.4 to 1.9 μg N₂O‐N L^?1, respectively, with N₂O saturation reaching 404%. Floating headspace chambers were used to sample N₂O fluxes. N₂O‐N fluxes were significantly related to dissolved N₂O‐N concentrations (r²=0.31) but not to NO₃‐N concentrations. The N₂O‐N fluxes ranged from 38 to 501 μg m^?2 h^?1, averaging 171 μg m^?2 h^?1 (±SD 85) overall. The measured N₂O‐N fluxes equated to an EF5‐r of only 6.6% of that calculated using the IPCC methodology, and this itself was considered to be an overestimate because of the degassing of antecedent dissolved N₂O present in the groundwater that fed the river.     

Comparison of measured and EF5-r-derived N2O fluxes from a spring-fed river

There is considerable uncertainty in the estimates of indirect N₂O emissions as defined by the intergovernmental panel on climate change's (IPCC) methodology. Direct measurements of N₂O yields and fluxes in aquatic river environments are sparse and more data are required to determine the role that rivers play in the global N₂O budget. The objectives of this research were to measure the N₂O fluxes from a spring‐fed river, relate these fluxes to the dissolved N₂O concentrations and NO₃‐N loading of the river, and to try and define the indirect emission factor (EF5‐r) for the river. Gas bubble ebullition was observed at the river source with bubbles containing 7.9 μL N₂O L^?1. River NO₃‐N and dissolved N₂O concentrations ranged from 2.5 to 5.3 mg L^?1 and 0.4 to 1.9 μg N₂O‐N L^?1, respectively, with N₂O saturation reaching 404%. Floating headspace chambers were used to sample N₂O fluxes. N₂O‐N fluxes were significantly related to dissolved N₂O‐N concentrations (r²=30.6) but not to NO₃‐N concentrations. The N₂O‐N fluxes ranged from 38–501 μg m^?2 h^?1, averaging 171 μg m^?2 h^?1 (±SD 85) overall. The measured N₂O‐N fluxes equated to an EF5‐r of only 6.6% of that calculated using the IPCC methodology, and this itself was considered to be an overestimate because of the degassing of antecedent dissolved N₂O present in the groundwater that fed the river.     

Plant and soil responses of an alpine steppe on the Tibetan Plateau to multi-level nitrogen addition

Background

Although plant growth in alpine steppes on the Tibetan Plateau has been suggested to be sensitive to nitrogen (N) addition, the N limitation conditions of alpine steppes remain uncertain.

Methods

After 2 years of fertilization with NH₄NO₃ at six rates (0, 10, 20, 40, 80 and 160 kg N ha^?1 yr^?1), the responses of plant and soil parameters as well as N₂O fluxes were measured.

Results

At the vegetation level, N addition resulted in an increase in the aboveground N pool from 0.5?±?0.1 g m^?2 in the control plots to 1.9?±?0.2 g m^?2 in the plots at the highest N input rate. The aboveground C pool, biomass N concentration, foliar δ¹⁵N, soil NO₃ ^?-N and N₂O flux were also increased by N addition. However, as the N fertilization rate increased from 10 kg N ha^?1 yr^?1 to 160 kg N ha^?1 yr^?1, the N-use efficiency decreased from 12.3?±?4.6 kg C kg N^?1 to 1.6?±?0.2 kg C kg N^?1, and the N-uptake efficiency decreased from 43.2?±?9.7 % to 9.1?±?1.1 %. Biomass N:P ratios increased from 14.4?±?2.6 in the control plots to 20.5?±?0.8 in the plots with the highest N input rate. Biomass N:P ratios, N-uptake efficiency and N-use efficiency flattened out at 40 kg N ha^?1 yr^?1. Above this level, soil NO₃ ^?-N began to accumulate. The seasonal average N₂O flux of growing season nonlinearly increased with increased N fertilization rate and linearly increased with the weighted average foliar δ¹⁵N. At the species level, N uptake responses to relative N availability were species-specific. Biomass N concentration of seven out of the eight non-legume species increased significantly with N fertilization rates, while Kobresia macrantha and the one legume species (Oxytropics glacialis) remained stable. Both the non-legume and the legume species showed significant ¹⁵N enrichment with increasing N fertilization rate. All non-legume species showed significant increased N:P ratios with increased N fertilization rate, but not the legume species.

Conclusions

Our findings suggest that the Tibetan alpine steppes might be N-saturated above a critical N load of 40 kg N ha^?1 yr^?1. For the entire Tibetan Plateau (ca. 2.57 million km²), a low N deposition rate (10 kg N ha^?1 yr^?1) could enhance plant growth, and stimulate aboveground N and C storage by at least 1.1?±?0.3 Tg N yr^?1 and 31.5?±?11.8 Tg C yr^?1, respectively. The non-legume species was N-limited, but the legume species was not limited by N.     

Fish as sources and sinks of nutrients in lakes

1. The release of total phosphorus (TP) and nitrogen (N in ammonium) was measured for the five most abundant fish species (>85% of biomass) in Mouse and Ranger Lakes, two biomanipulated, oligotrophic lakes in Ontario. 2. The specific release rate of both nutrients was significantly related to fish mass; log₁₀ TP release rate (μg h^?1) = 0.793 (±0.109) [log₁₀ wet mass (g)] + 0.7817 (±0.145), and log₁₀ N release rate (μg h^?1) = 0.6946 (±0.079) [log₁₀wet mass (g)] + 1.7481 (±0.108). 3. When fish nutrient release was standardized for abundance (all populations, 1993–95) and epilimnetic volume, fish were estimated to contribute 0.083 (±0.061) μg TP L^?1 day^?1, and 0.41 (±0.17) μg N L^?1 day^?1 in Mouse L., and 0.062 (±0.020) μg TP L^?1 day^?1 and 0.31 (±0.08) μg N L^?1 day^?1 in Ranger L. 4. In comparison, concurrent rates of total planktonic P regeneration were 1.02 (±0.45) μg L^?1 day^?1 (Mouse L.) and 0.85 (±0.19) μg L^?1 day^?1 (Ranger L.). Fish represented 8% of planktonic P release in Mouse L. and 7% in Ranger L. 5. Fish dry mass had mean elemental body compositions of 39.3% carbon, 10.9% nitrogen, and 4.0% phosphorus (all fish combined), with a mean molar C : N : P ratio of 27 : 6 : 1. This comprised about 55% and 23% of the total epilimnetic particulate P and N respectively. 6. Turnover times of P and N in fish were approximately 103 and 48 days respectively. In comparison, planktonic turnover times of particulate P in Mouse and Ranger Lakes were 4.3 and 4.4 days respectively. Given their high P content and low turnover rates, fish appear to be important P sinks in lakes.     

Fine root dynamics and trace gas fluxes in two lowland tropical forest soils

Fine root dynamics have the potential to contribute significantly to ecosystem‐scale biogeochemical cycling, including the production and emission of greenhouse gases. This is particularly true in tropical forests which are often characterized as having large fine root biomass and rapid rates of root production and decomposition. We examined patterns in fine root dynamics on two soil types in a lowland moist Amazonian forest, and determined the effect of root decay on rates of C and N trace gas fluxes. Root production averaged 229 (±35) and 153 (±27) g m^?2 yr^?1 for years 1 and 2 of the study, respectively, and did not vary significantly with soil texture. Root decay was sensitive to soil texture with faster rates in the clay soil (k=?0.96 year^?1) than in the sandy loam soil (k=?0.61 year^?1), leading to greater standing stocks of dead roots in the sandy loam. Rates of nitrous oxide (N₂O) emissions were significantly greater in the clay soil (13±1 ng N cm^?2 h^?1) than in the sandy loam (1.4±0.2 ng N cm^?2 h^?1). Root mortality and decay following trenching doubled rates of N₂O emissions in the clay and tripled them in sandy loam over a 1‐year period. Trenching also increased nitric oxide fluxes, which were greater in the sandy loam than in the clay. We used trenching (clay only) and a mass balance approach to estimate the root contribution to soil respiration. In clay soil root respiration was 264–380 g C m^?2 yr^?1, accounting for 24% to 35% of the total soil CO₂ efflux. Estimates were similar using both approaches. In sandy loam, root respiration rates were slightly higher and more variable (521±206 g C m² yr^?1) and contributed 35% of the total soil respiration. Our results show that soil heterotrophs strongly dominate soil respiration in this forest, regardless of soil texture. Our results also suggest that fine root mortality and decomposition associated with disturbance and land‐use change can contribute significantly to increased rates of nitrogen trace gas emissions.     

Sulphate transport in the cyanobacterium Synechococcus R-2 (Anacystis nidulans, S. leopoliensis) PCC 7942

Synechococcus R-2 (PCC 1942) actively accumulates sulphate in the light and dark. Intracellular sulphate was 1.35 ± 0.23 mol m^?3 (light) and 0.894 ± 0.152 mol m^?3 (dark) under control conditions (BG-11 media: pH_o, 7.5; [SO₄^2?]_o, 0.304 mol m^?3). The sulphate transporter is different from that found in higher plants: it appears to be an ATP-driven pump transporting one SO₄^2?/ATP [ΔμSO₄^2?_i,o=+ 27.7 ± 0.24 kJ mol^?1 (light) and + 24 ± 0.34 kj mol^?1 (dark)]. The rate of metabolism of SO₄^2?at pH_o, 7.5 was 150 ± 28 pmol m^?2 s^?1 (n = 185) in the light but only 12.8 ± 3.6 pmol m^?2 s^?1 (n = 61) in the dark. Light-driven sulphate uptake is partially inhibited by DCMU and chloramphenicol. Sulphate uptake is not linked to potassium, proton, sodium or chloride transport. The alga has a constitutive over-capacity for sulphate uptake [light (n= 105): K_m= 0.3 ± 0.1 mmol m^?3, V_max, = 1.8 ± 0.6 nmol m^?2 s^?1; dark (n= 56): K_m= 1.4 ± 0.4 mmol m^?3, V_max= 41 ± 22 pmol m^?2 s^?1]. Sulphite (SO₃^2?) was a competitive inhibitor of sulphate uptake. Selenate (SeO₄^2?) was an uncompetitive inhibitor.     

Solvent‐dependent conformation of amylose tris(phenylcarbamate) as deduced from scattering and viscosity data

The z‐average mean‐square radius of gyration 〈S²〉_z, the particle scattering function P(k), the second virial coefficient, and the intrinsic viscosity [η] have been determined for amylose tris(phenylcarbamate) (ATPC) in methyl acetate (MEA) at 25°C, in ethyl acetate (EA) at 33°C, and in 4‐methyl‐2‐pentanone (MIBK) at 25°C by light and small‐angle X‐ray scattering and viscometry as functions of the weight‐average molecular weight in a range from 2 × 10⁴ to 3 × 10⁶. The first two solvents attain the theta state, whereas the last one is a good solvent for the amylose derivative. Analysis of the 〈S²〉_z, P(k), and [η] data based on the wormlike chain yields h (the contour length or helix pitch per repeating unit) = 0.37 ± 0.02 and λ^?1 (the Kuhn segment length) = 15 ± 2 nm in MEA, h = 0.39 ± 0.02 and λ^?1 = 17 ± 2 nm in EA, and h = 0.42 ± 0.02 nm and λ^?1 = 24 ± 2 nm in MIBK. These h values, comparable with the helix pitches (0.37–0.40 nm) per residue of amylose triesters in the crystalline state, are somewhat larger than the previously determined h of 0.33 ± 0.02 nm for ATPC in 1,4‐dioxane and 2‐ethoxyethanol, in which intramolecular hydrogen bonds are formed between the C?O and NH groups of the neighbor repeating units. The slightly extended helices of ATPC in the ketone and ester solvents are most likely due to the replacement of those hydrogen bonds by intermolecular hydrogen bonds between the NH groups of the polymer and the carbonyl groups of the solvent. © 2009 Wiley Periodicals, Inc. Biopolymers 91: 729–736, 2009. This article was originally published online as an accepted preprint. The “Published Online” date corresponds to the preprint version. You can request a copy of the preprint by emailing the Biopolymers editorial office at biopolymers@wiley.com     

The effect of hypoxia on ventilation frequency in startled common sole Solea solea

Ventilation frequency (F_V) in motionless common sole Solea solea was measured before and after a startling stimulus in normoxia and in hypoxia (15% air saturation). Startling reduced F_V in normoxia (from mean ±s.e. 41 ± 3·3 beats min^?1 to near zero, i.e. 2·0 ± 1·8 beats min^?1) and in hypoxia (from mean ±s.e. 80 ± 4·4 to 58·8 ± 12·9 beats min^?1). It is suggested that the maintenance of high F_V in hypoxia may increase the probability of detection by predators compared to normoxia.     

Toxicity of ammonia and nitrite to yellow catfish (Pelteobagrus fulvidraco)

The 96‐h LC₅₀ (median lethal concentration, LC₅₀) tests were conducted using four different sizes of yellow catfish Pelteobagrus fulvidraco to provide primary information on the sensitivity of this species to elevated ammonia and/or nitrite, and to determine if the sensitivity is mediated by size under the same conditions. The results showed that 96‐h LC₅₀ of fish weighing 0.034 ± 0.002, 0.296 ± 0.049, 3.52 ± 0.95 and 32.96 ± 5.75 g to total ammonia nitrogen‐N was 24.96, 35.85, 47.44 and 68.79 mg L^?1, respectively; un‐ionized ammonia nitrogen‐N was 0.34, 0.49, 0.65 and 0.94 mg L^?1 in test conditions of pH 7.42 and 23°C; and that nitrite nitrogen‐N was 69.06, 97.23, 133.61 and 196.05 mg L^?1 in test conditions of pH 7.58 and 23°C, respectively. The NOEL (No Observable Effect Level) of fish (body weight from 0.03 to 30 g) to ammonia and nitrite was 2.25–6.22 mg L^?1 total ammonia nitrogen‐N, 0.03–0.10 mg L^?1 un‐ionized ammonia nitrogen‐N in test conditions of pH 7.42 and 23°C, and 6.27–17.68 mg L^?1 nitrite nitrogen‐N in test conditions of pH 7.58 and 23°C, respectively. These results indicate that the susceptibility of this fish to total ammonia or nitrite was reduced with increasing size, and that a dose‐dependent relationship might exist between them. The 96‐h LC₅₀ and NOEL of different sizes of fish to total ammonia, un‐ionized ammonia and nitrite would be important to know for water quality standards in yellow catfish aquaculture.     

The impact of different chelating leaving groups on the substitution kinetics of mononuclear PtII(1,2- trans - R , R -diaminocyclohexane)(X–Y) complexes

A set of three oxaliplatin derivatives containing 1,2-trans-R,R-diaminocyclohexane (dach) as a spectator ligand and different chelating leaving groups X–Y, viz., [Pt(dach)(O,O-cyclobutane-1,1-dicarboxylate)], or Pt(dach)(CBDCA), [Pt(dach)(N,O-glycine)]⁺, or Pt(dach)(gly), and [Pt(dach)(N,S-methionine)]⁺, or Pt(dach)(l-Met), where l-Met is l-methionine, were synthesized and the crystal structure of Pt(dach)(gly) was determined by X-ray diffraction. The effect of the leaving group on the reactivity of the resulting Pt(II) complexes was studied for the nucleophiles thiourea, glutathione (GSH) and l-Met under pseudo-first-order conditions as a function of nucleophile concentration and temperature, using UV–vis spectrophotometric techniques. ¹H NMR spectroscopy was used to follow the substitution of the leaving group by guanosine 5′-monophosphate (5′-GMP²⁻) under second-order conditions. The rate constants indicate for all reactions a direct substitution of the X–Y chelate by the selected nucleophiles, thereby showing that the nature of the chelate, viz., O–O (CBDCA²⁻), N–O (glycine) or S–N (l-Met), respectively, plays an important role in the kinetic and mechanistic behavior of the Pt(II) complex. The k ₁ values for the reaction with thiourea, l-Met, GSH and 5′-GMP²⁻ were found to be as follows (10³ k ₁, 37.5 °C, M⁻¹ s⁻¹): Pt(dach)(CBDCA) 61 ± 2, 21.6 ± 0.1, 23 ± 1, 0.352 ± 0.002; Pt(dach)(gly) 82 ± 3, 6.2 ± 0.2, 37 ± 1, 1.77 ± 0.01; Pt(dach)(l-Met) (thiourea, GSH) 62 ± 2, 24 ± 1. The activation parameters for all reactions studied suggest an associative substitution mechanism. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Effects of seasonality,transport pathway,and spatial structure on greenhouse gas fluxes in a restored wetland

Wetlands can influence global climate via greenhouse gas (GHG) exchange of carbon dioxide (CO₂), methane (CH₄), and nitrous oxide (N₂O). Few studies have quantified the full GHG budget of wetlands due to the high spatial and temporal variability of fluxes. We report annual open‐water diffusion and ebullition fluxes of CO₂, CH₄, and N₂O from a restored emergent marsh ecosystem. We combined these data with concurrent eddy‐covariance measurements of whole‐ecosystem CO₂ and CH₄ exchange to estimate GHG fluxes and associated radiative forcing effects for the whole wetland, and separately for open‐water and vegetated cover types. Annual open‐water CO₂, CH₄, and N₂O emissions were 915 ± 95 g C‐CO₂ m^?2 yr^?1, 2.9 ± 0.5 g C‐CH₄ m^?2 yr^?1, and 62 ± 17 mg N‐N₂O m^?2 yr^?1, respectively. Diffusion dominated open‐water GHG transport, accounting for >99% of CO₂ and N₂O emissions, and ~71% of CH₄ emissions. Seasonality was minor for CO₂ emissions, whereas CH₄ and N₂O fluxes displayed strong and asynchronous seasonal dynamics. Notably, the overall radiative forcing of open‐water fluxes (3.5 ± 0.3 kg CO₂‐eq m^?2 yr^?1) exceeded that of vegetated zones (1.4 ± 0.4 kg CO₂‐eq m^?2 yr^?1) due to high ecosystem respiration. After scaling results to the entire wetland using object‐based cover classification of remote sensing imagery, net uptake of CO₂ (?1.4 ± 0.6 kt CO₂‐eq yr^?1) did not offset CH₄ emission (3.7 ± 0.03 kt CO₂‐eq yr^?1), producing an overall positive radiative forcing effect of 2.4 ± 0.3 kt CO₂‐eq yr^?1. These results demonstrate clear effects of seasonality, spatial structure, and transport pathway on the magnitude and composition of wetland GHG emissions, and the efficacy of multiscale flux measurement to overcome challenges of wetland heterogeneity.     

Nitrous oxide fluxes from corn fields: on-farm assessment of the amount and timing of nitrogen fertilizer

Nitrogen fertilization is considered as an important source of atmospheric N₂O emission. A seven site‐year on‐farm field experiment was conducted at Ottawa and Guelph, ON and Saint‐Valentin, QC, Canada to characterize the affect of the amount and timing of N fertilizer on N₂O emission in corn (Zea mays L.) production. Using the static chamber method, gas samples were collected for 28‐days after preplant and 28‐days after sidedress fertilization at the seven site‐year, resulting in 14 monitoring periods. For both methods of fertilization, peak N₂O flux and cumulative emission increased with the amount of N applied, with rates ranging from 30 to 900 μg N m^?2 h^?1. Depending on N amount and time of application, cumulative emission varied from 0.05 to 2.42 kg N ha^?1, equivalent to 0.03% to 1.45% of the N fertilizer applied. Differences in N₂O emission peaks among fertilizer treatments were clearly separated in 13 out of 14 monitoring periods. Total N₂O emissions may have been underestimated compared with annual monitoring in 10 out of the 49 cases because the monitoring period ended before N₂O efflux returned to the baseline level. The flux of N₂O was negligible when soil mineral N in the 0–15 cm layer was < 20 mg N kg^?1. While rainfall stimulated emission, soil temperature > 15 °C was likely the driving force responsible for the higher levels of N₂O found for sidedress than preplant application methods. However, caution must be taken when interpreting these later results as preplant fertilization may have continuously stimulated N₂O emissions after the 28‐days monitoring period, especially in situations where N₂O effluxes have not fallen back to their baseline levels. Increasing fertilizer rates from 90 to 150 kg N ha^?1 resulted in slight increases in yields, but doubled cumulative N₂O emissions.