Microflora participating in the decomposition of carboxymethyl cellulose continuously added to the soil

The microbial community in the soil was analyzed during four weeks of a continuous enrichment of structural chernozem soil samples with a 0.1% solution of carboxymethyl cellulose (CMC) under aerobic and semianaerobic conditions. During the first 14 d, the total amount of the aerobic and anaerobic, cellulose-degrading microorganisms increased significantly. Various metabolic pathways were u‘ed te decompose the substrate: diverse metabolic systems were activated and different groups of microorganisms preferred in dependence on the presence of oxygen or the source of mineral nitrogen. In the later phases of cultivation, a decrease in the concentration of zymogenous microflora and in the level of substrate mineralization was observed ovon though CM-cellulase activity remained high. During the fourth week of cultivation, a conspicuous increase in the numbers of oligothropic bacteria occurring in the colcnies of the microorganisms degrading cellulose was found. The representatives of prosthecobacteria (Caulobacter, Hyphomicrobium, Prosthecomicrobium spp.) andSeliberia sp. were thus identified. This “microflora of dispersion” attends the zymogenous microbes degrading CMC and indicates later phases of the process of decomposition.     

Carbon fluxes in the rhizosphere of sweet chestnut seedlings (Castanea sativa) grown under two atmospheric CO2 concentrations: 14C partitioning after pulse labelling

Partitioning of ¹⁴C was assessed in sweet chestnut seedlings (Castanea sativa Mill.) grown in ambient and elevated atmospheric [CO₂] environments during two vegetative cycles. The seedlings were exposed to ¹⁴CO₂ atmosphere in both high and low [CO₂] environments for a 6-day pulse period under controlled laboratory conditions. Six days after exposure to ¹⁴CO₂, the plants were harvested, their dry mass and the radioactivity were evaluated. ¹⁴C concentration in plant tissues, root-soil system respiratory outputs and soil residues (rhizodeposition) were measured. Root production and rhizodeposition were increased in plants growing in elevated atmospheric [CO₂]. When measuring total respiration, i.e. CO₂ released from the root/soil system, it is difficult to separate CO₂ originating from roots and that coming from the rhizospheric microflora. For this reason a model accounting for kinetics of exudate mineralization was used to estimate respiration of rhizospheric microflora and roots separately. Root activity (respiration and exudation) was increased at the higher atmospheric CO₂ concentration. The proportion attributed to root respiration accounted for 70 to 90% of the total respiration. Microbial respiration was related to the amount of organic carbon available in the rhizosphere and showed a seasonal variation dependent upon the balance of root exudation and respiration. The increased carbon assimilated by plants grown under elevated atmospheric [CO₂] stayed equally distributed between these increased root activities. ei]H Lambers     

Carbon and nitrogen turnover in adjacent grassland and cropland ecosystems

The effects of cultivation and soil texture on net and gross N mineralization, CO₂ evolution and C and N turnover were investigated using paired grassland and cropped sites on soils of three textures. Gross N mineralization and immobilization were measured using¹⁵N-isotope dilution. Grassland soils had high CO₂ evolution and gross N mineralization rates, and low net N mineralization rates. Cropland soils had low CO₂ evolution rates but had high net and gross N mineralization rates. Grassland soils thus had high immobilization rates and cropland soils had low immobilization rates. Cultivation increased N turnover but reduced C turnover. The data suggest that the microflora in grassland soils are N limited, while those of cropland soils are limited by C availability. Increasing clay content reduced N turnover. C turnover was less clearly related to texture. Differences in the immobilization potential of substrates help explain why agricultural soils have higher N losses than do grassland soils.     

Assessment of soil nitrogen and phosphorous availability under elevated CO2 and N-fertilization in a short rotation poplar plantation

Photosynthetic stimulation by elevated [CO₂] is largely regulated by nitrogen and phosphorus availability in the soil. During a 6 year Free Air CO₂ Enrichment (FACE) experiment with poplar trees in two short rotations, inorganic forms of soil nitrogen, extractable phosphorus, microbial and total nitrogen were assessed. Moreover, in situ and potential nitrogen mineralization, as well as enzymatic activities, were determined as measures of nutrient cycling. The aim of this study was to evaluate the effects of elevated [CO₂] and fertilization on: (1) N mineralization and immobilization processes; (2) soil nutrient availability; and (3) soil enzyme activity, as an indication of microbial and plant nutrient acquisition activity. Independent of any treatment, total soil N increased by 23% in the plantation after 6 years due to afforestation. Nitrification was the main process influencing inorganic N availability in soil, while ammonification being null or even negative. Ammonium was mostly affected by microbial immobilization and positively related to total N and microbial biomass N. Elevated [CO₂] negatively influenced nitrification under unfertilised treatment by 44% and consequently nitrate availability by 30% on average. Microbial N immobilization was stimulated by [CO₂] enrichment and probably enhanced the transformation of large amounts of N into organic forms less accessible to plants. The significant enhancement of enzyme activities under elevated [CO₂] reflected an increase in nutrient acquisition activity in the soil, as well as an increase of fungal population. Nitrogen fertilization did not influence N availability and cycling, but acted as a negative feed-back on phosphorus availability under elevated CO₂.     

Six years of in situ CO2 enrichment evoke changes in soil structure and soil biota of nutrient-poor grassland

Nutrient‐poor grassland on a silty clay loam overlying calcareous debris was exposed to elevated CO₂ for six growing seasons. The CO₂ exchange and productivity were persistently increased throughout the experiment, suggesting increases in soil C inputs. At the same time, elevated CO₂ lead to increased soil moisture due to reduced evapotransporation. Measurements related to soil microflora did not indicate increased soil C fluxes under elevated CO₂. Microbial biomass, soil basal respiration, and the metabolic quotient for CO₂ (qCO₂) were not altered significantly. PLFA analysis indicated no significant shift in the ratio of fungi to bacteria. 0.5 m KCl extractable organic C and N, indicators of changed DOC and DON concentrations, also remained unaltered. Microbial grazer populations (protozoa, bacterivorous and fungivorous nematodes, acari and collembola) and root feeding nematodes were not affected by elevated CO₂. However, total nematode numbers averaged slightly lower under elevated CO₂ (?16%, ns) and nematode mass was significantly reduced (?43%, P = 0.06). This reduction reflected a reduction in large‐diameter nematodes classified as omnivorous and predacious. Elevated CO₂ resulted in a shift towards smaller aggregate sizes at both micro‐ and macro‐aggregate scales; this was caused by higher soil moisture under elevated CO₂. Reduced aggregate sizes result in reduced pore neck diameters. Locomotion of large‐diameter nematodes depends on the presence of large enough pores; the reduction in aggregate sizes under elevated CO₂ may therefore account for the decrease in large nematodes. These animals are relatively high up the soil food web; this decline could therefore trigger top‐down effects on the soil food web. The CO₂ enrichment also affected the nitrogen cycle. The N stocks in living plants and surface litter increased at elevated CO₂, but N in soil organic matter and microbes remained unaltered. Nitrogen mineralization increased markedly, but microbial N did not differ between CO₂ treatments, indicating that net N immobilization rates were unaltered. In summary, this study did not provide evidence that soils and soil microbial communities are affected by increased soil C inputs under elevated CO₂. On the contrary, available data (¹³C tracer data, minirhizotron observations, root ingrowth cores) suggests that soil C inputs did not increase substantially. However, we provide first evidence that elevated CO₂ can reduce soil aggregation at the scale from µ m to mm scale, and that this can affect soil microfaunal populations.     

Carbon dynamics and microbial activity in tallgrass prairie exposed to elevated CO2 for 8 years

Alterations in microbial mineralization and nutrient cycling may control the long-term response of ecosystems to elevated CO₂. Because micro-organisms constitute a labile fraction of potentially available N and are regulators of decomposition, an understanding of microbial activity and microbial biomass is crucial. Tallgrass prairie was exposed to twice ambient CO₂ for 8 years beginning in 1989. Starting in 1991 and ending in 1996, soil samples from 0 to 5 and 5 to 15 cm depths were taken for measurement of microbial biomass C and N, total C and N, microbial activity, inorganic N and soil water content. Because of increased water-use-efficiency by plants, soil water content was consistently and significantly greater in elevated CO₂ compared to ambient treatments. Soil microbial biomass C and N tended to be greater under elevated CO₂ than ambient CO₂ in the 5–15 cm depth during most years, and in the month of October, when analyzed over the entire study period. Microbial activity was significantly greater at both depths in elevated CO₂ than ambient conditions for most years. During dry periods, the greater water content of the surface 5 cm soil in the elevated CO₂ treatments increased microbial activity relative to the ambient CO₂ conditions. The increase in microbial activity under elevated CO₂ in the 5–15 cm layer was not correlated with differences in soil water contents, but may have been related to increases in soil C inputs from enhanced root growth and possibly greater root exudation. Total soil C and N in the surface 15 cm were, after 8 years, significantly greater under elevated CO₂ than ambient CO₂. Our results suggest that decomposition is enhanced under elevated CO₂ compared with ambient CO₂, but that inputs of C are greater than the decomposition rates. Soil C sequestration in tallgrass prairie and other drought-prone grassland systems is, therefore, considered plausible as atmospheric CO₂ increases. This revised version was published online in June 2006 with corrections to the Cover Date.     

Sequestration and turnover of plant- and microbially derived sugars in a temperate grassland soil during 7 years exposed to elevated atmospheric pCO2

Temperate grasslands contribute about 20% to the global terrestrial carbon (C) budget with sugars contributing 10–50% to this soil C pool. Whether the observed increase of the atmospheric CO₂ concentration (pCO₂) leads to additional C sequestration into these ecosystems or enhanced mineralization of soil organic matter (SOM) is still unclear. Therefore, the aim of the presented study was to investigate the impact of elevated atmospheric pCO₂ on C sequestration and turnover of plant‐ (arabinose and xylose) and microbially derived (fucose, rhamnose, galactose, mannose) sugars in soil, representing a labile SOM pool. The study was carried out at the Swiss Free Air Carbon Dioxide Enrichment (FACE) experiment near Zurich. For 7 years, Lolium perenne swards were exposed to ambient and elevated pCO₂ (36 and 60 Pa, respectively). The additional CO₂ in the FACE plots was depleted in ¹³C compared with ambient plots, so that ‘new’ (<7 years) C inputs could be determined by means of compound‐specific stable isotope analysis (¹³C : ¹²C). Samples were fractionated into clay, silt, fine sand and coarse sand, which yielded relatively stable and labile SOM pools with different turnover rates. Total sugar sequestration into bulk soil after 7 years of exposure to elevated pCO₂ was about 28% compared with the control plots. In both ambient and elevated plots, total sugar concentrations in particle size fractions increased in the order sand2 for coarse sand, fine sand and silt (about 274%, 17% and 96%, respectively) but about 14% lower for clay compared with the control plots, corroborating that sugars belong to the labile SOM pool. The fraction of newly produced sugars gradually increased by up to 50% in bulk soil samples after 7 years under elevated pCO₂. In the ambient plots, sugars were enriched in ¹³C by up to 10‰ when compared with bulk soil samples from the same plots. The enrichment of ¹³C in plant‐derived sugars was up to 13.4‰ when compared with parent plant material. After 7 years, the δ¹³C values of individual sugars decreased under elevated (¹³C‐depleted) CO₂ in bulk soil and particle size fractions, varying between −13.7‰ and −37.8‰ under elevated pCO₂. In coarse and fine sand, silt and clay fractions newly produced sugars made up 106%, 63%, 60% and 45%, respectively, of the total sugars present after 7 years. Mean residence time (MRT) of the sugars were calculated according to two models revealing a few decades, mean values increasing in the order coarse sand2 led to a net sequestration of about 30% of labile SOM (sugars) while no increase of total organic C was observed at the same plots. The additional labile SOM is gradually incorporated into more stable SOM pools such as silt and clay fractions in the medium term (<7 years). MRT of labile (sugar) SOM under elevated pCO₂ is in the same order of magnitude when compared with studies under ambient pCO₂ though no direct comparison of elevated and ambient plots was possible.     

Two-step degradation of pyrene by white-rot fungi and soil microorganisms

  The effect of soil microorganisms on mineralization of ¹⁴C-labelled pyrene by white-rot fungi in solid-state fermentation was investigated. Two strains of white-rot fungi, Dichomitus squalens and a Pleurotus sp., were tested. The fungi were incubated on milled wheat straw contaminated with [¹⁴C]pyrene for 15 weeks. CO₂ and ¹⁴CO₂ liberated from the cultures were determined weekly. To study the effect of soil microorganisms on respiration and [¹⁴C]pyrene mineralization in different periods of fungal development, the fungal substrate was covered with soil at different times of incubation (after 0, 1, 3, 5, 7, 9 or 11 weeks). The two fungi showed contrasting ecological behaviour in competition with the soil microflora. Pleurotus sp. was highly resistant to microbial attack and had the ability to penetrate the soil. D. squalens was less competitive and did not colonize the soil. The resistance of the fungus was dependent on the duration of fungal preincubation. Mineralization of [¹⁴C]pyrene by mixed cultures of D. squalens and soil microorganisms was higher than by the fungus or the soil microflora alone when soil was added after 3 weeks of incubation or later. With Pleurotus sp., the mineralization of [¹⁴C]pyrene was enhanced by the soil microflora irrespective of the time of soil application. With D. squalens, which in pure culture mineralized less [¹⁴C]pyrene than did Pleurotus sp., the increase of [¹⁴C]pyrene mineralization caused by soil application was higher than with Pleurotus sp. Received: 8 March 1996 / Received revision: 1 July 1996 / Accepted: 8 July 1996     

Relations between soil microflora and CO2 evolution upon decomposition of cellulose

Summary The investigation was carried out to study the relation between CO₂ evolution and the changes in microflora in the case of cellulose-decomposition in soil with special attention to the heterogeneity of soil crumbs.The rates of CO₂ evolution correlated with the number of Gram-negative bacteria, while the number of cellulose-decomposing microorganisms did not. The Gram-negative bacteria probably contribute directly to CO₂ evolution by decomposing simple sugars produced from cellulose by cellulose-decomposing microorganisms. Both the Gram-negative bacteria and cellulose-decomposing microorganisms seemed to grow luxuriantly on the surface area of soil crumbs with added cellulose powder. Therefore, it is speculated that there is a cooperation between the Gram-negative bacteria and the cellulose-decomposing microorganisms with respect to cellulose decomposition in soil. The main locus where this reaction takes place may be the surface area of soil crumbs.This work was carried out at the Laboratory of Microbiology, Agricultural University, Wageningen, The Netherlands during author's stay as guest researcher.     

Sequestration and turnover of bacterial- and fungal-derived carbon in a temperate grassland soil under long-term elevated atmospheric pCO2

Temperate grasslands contribute about 20% to the global C budget. Elevation of atmospheric CO₂ concentration (pCO₂) could lead to additional C sequestration into these ecosystems. Microbial‐derived C in the soil comprising about 1–5% of total soil organic carbon may be an important ‘pool’ for long‐term storage of C under future increased atmospheric CO₂ concentrations. In our study, the impact of elevated pCO₂ on bacterial‐ and fungal‐derived C in the soil of Lolium perenne pastures was investigated under free air carbon dioxide enrichment (FACE) conditions. For 7 years, L. perenne swards were exposed to ambient and elevated pCO₂ (36 and 60 Pa pCO₂, respectively). The additional CO₂ in the FACE plots was depleted in ¹³C compared with ambient plots, so that ‘new’ (<7 years) C inputs in the form of microbial‐derived residues could be determined by means of stable C isotope analysis. Amino sugars in soil are reliable organic biomarkers for indicating the presence of microbial‐derived residues, with particular amino sugars indicative of either bacterial or fungal origin. It is assumed that amino sugars are stabilized to a significant extent in soil, and so may play an important role in long‐term C storage. In our study, we were also able to discriminate between ‘old’ (> 7 years) and ‘new’ microbial‐derived C using compound‐specific δ¹³C analysis of individual amino sugars. This new tool was very useful in investigating the potential for C storage in microbial‐derived residues and the turnover of this C in soil under increased atmospheric pCO₂. The ¹³C signature of individual amino sugars varied between ?17.4‰ and ?39.6‰, and was up to 11.5% depleted in ¹³C in the FACE plots when compared with the bulk δ¹³C value of the native C3 L. perenne soil. New amino sugars in the bulk soil contributed up to 16% to the overall amino sugar pool after the first year and between 62% and 125% after 7 years of exposure to elevated pCO₂. Amounts of new glucosamine increased by the greatest amount (16–125%) during the experiment, followed by mannosamine (?9% to 107%), muramic acid (?11% to 97%), and galactosamine (15–62%). Proportions of new amino sugars in particle size fractions varied between 38% for muramic acid in the clay fraction and 100% for glucosamine and galactosamine in the coarse sand fraction. Summarizing, during the 7‐year period, amino sugars constituted only between 0.9% and 1.6% of the total SOC content. Therefore, their absolute significance for long‐term C sequestration is limited. Additionally new amino sugars were only sequestered in the silt fraction upon elevated pCO₂ exposure while amino sugar concentrations in the clay fraction decreased. Overall, amino sugar concentrations in bulk soil did not change significantly upon exposure to elevated pCO₂. The calculated mean residence time of amino sugars was surprisingly low varying between 6 and 90 years in the bulk soil, and between 3 and 30 years in the particle size fractions, representing soil organic matter pools with different but relatively low turnover times. Therefore, compound‐specific δ¹³C analysis of individual amino sugars clearly revealed a high amino sugar turnover despite more or less constant amino sugar concentrations over a 7 years period of exposure to elevated pCO₂.     

Rapid anaerobic mineralization of pyridine in a subsurface sediment inoculated with a pyridine-degrading Alcaligenes sp.

Summary A denitrifying bacterium capable of pyridine mineralization under anaerobic conditions was isolated from polluted soil. The bacterium, identified as Alcaligenes sp., was used in inoculation experiments. A subsurface sediment from a polluted site was amended with 10 g/g ¹⁴C-labeled pyridine, and 250 g/g nitrate, and then inoculated with the bacterium at an inoculum size of 4.5 × 10⁷ cells/g. After 44 h incubation at 28° C under anaerobic conditions, 67% of the radioactivity was recovered as ¹⁴CO₂: 2% was extracted with 50% methanol, and 24% was recovered by combustion of the sediment. Analysis of the methanol extract revealed that no pyridine could be detected in the inoculated sediment. In contrast, mineralization of pyridine by the native microflora in the sediment occurred much more slowly: after 7 days of incubation only 10% of the added radioactivity was recovered as ¹⁴CO₂. At an inoculum size of 2 × 10³ cells/g pyridine mineralization was not as effective as at an inoculum size of 2 × 10⁷ cells/g. It is presumed that suppression of the introduced bacteria by the native microflora of the sediment prevents degradation at a low inoculum size. Amending the sediment with nitrate and phosphate improved pyridine mineralization by the introduced bacterium. These findings demonstrate the feasibility of using soil inoculation anaerobically for the bioremediation of pyridine-polluted soils.     

Laboratory incubations reveal potential responses of soil nitrogen cycling to changes in soil C and N availability in Mojave Desert soils exposed to elevated atmospheric CO2

Elevated atmospheric carbon dioxide (CO₂) has the potential to alter soil carbon (C) and nitrogen (N) cycling in arid ecosystems through changes in net primary productivity. However, an associated feedback exists because any sustained increases in plant productivity will depend upon the continued availability of soil N. We took soils from under the canopies of major shrubs, grasses, and plant interspaces in a Mojave Desert ecosystem exposed to elevated atmospheric CO₂ and incubated them in the laboratory with amendments of labile C and N to determine if elevated CO₂ altered the mechanistic controls of soil C and N on microbial N cycling. Net ammonification increased under shrubs exposed to elevated CO₂, while net nitrification decreased. Elevated CO₂ treatments exhibited greater fluxes of N₂O–N under Lycium spp., but not other microsites. The proportion of microbial/extractable organic N increased under shrubs exposed to elevated CO₂. Heterotrophic N₂‐fixation and C mineralization increased with C addition, while denitrification enzyme activity and N₂O–N fluxes increased when C and N were added in combination. Laboratory results demonstrated the potential for elevated CO₂ to affect soil N cycling under shrubs and supports the hypothesis that energy limited microbes may increase net inorganic N cycling rates as the amount of soil‐available C increases under elevated CO₂. The effect of CO₂ enrichment on N‐cycling processes is mediated by its effect on the plants, particularly shrubs. The potential for elevated atmospheric CO₂ to lead to accumulation of NH₄⁺ under shrubs and the subsequent volatilization of NH₃ may result in greater losses of N from this system, leading to changes in the form and amount of plant‐available inorganic N. This introduces the potential for a negative feedback mechanism that could act to constrain the degree to which plants can increase productivity in the face of elevated atmospheric CO₂.     

Polysaccharide-hydrolyzing enzymes ofFrankia (Actinomycetales)

Studies were made of the polysaccharide-hydrolyzing activity inFrankia (Actinomycetales) grown in synthetic media using modifications of three standard assay procedures. In screening five different strains ofFrankia for cellulase activity, based on the method of utilization of cellulose in liquid culture, only one strain, CcI3, degraded filter paper cellulose to complete disintegration and only under very specific conditions of pH and primary carbon source. When carboxymethylcellulose (CMC) at 1% was used as substrate, all five strains showed the capacity to produce reducing sugars as hydrolytic products. Microcystalline cellulose, xylans and gum arabic were hydrolyzed to a lesser extent. Optimum activity depended upon pH and primary carbon source with pH 5.0 and pyruvate or propionate producing highest activities. In fractionation studies of culturedFrankia, assays for hydrolysis of 1% CMC in liquid medium showed that highest activity was in the enzyme preparation supernatant with lesser activity in the cell-free extract and cell wall fractions.Frankia strain CpI1 showed the greatest total hydrolytic activity against CMC after 2 weeks of culture. Strains ArI3 and CcI3 also showed good activity. The agar plate method for direct dye-polysaccharide interaction proved to be the least sensitive assay method with only ArI3 showing significant activity using CMC as substrate. It appears that theFranka strains grown in synthetic media all showed hydrolytic activity but the degree of hydrolysis of polysaccharides to reducing sugars depends upon strain of bacteria and very specific cultural conditions.     

Elevated CO2 and O3 Alter Soil Nitrogen Transformations beneath Trembling Aspen, Paper Birch, and Sugar Maple

Nitrogen cycling in northern temperate forest ecosystems could change under increasing atmospheric CO₂ and tropospheric O₃ as a result of quantitative and qualitative changes in plant litter production. At the Aspen Free Air CO₂–O₃ Enrichment (FACE) experiment, we previously found that greater substrate inputs to soil under elevated CO₂ did not alter gross N transformation rates in the first 3 years of the experiment. We hypothesized that greater litter production under elevated CO₂ would eventually cause greater gross N transformation rates and that CO₂ effects would be nullified by elevated O₃. Following our original study, we continued measurement of gross N transformation rates for an additional four years. From 1999 to 2003, gross N mineralization doubled, N immobilization increased 4-fold, but changes in microbial biomass N and soil total N were not detected. We observed year-to-year variation in N transformation rates, which peaked during a period of foliar insect damage. Elevated CO₂ caused equivalent increases in gross rates of N mineralization (+34%) and NH ₄ ⁺ immobilization (+36%). These results indicate greater rates of N turnover under elevated CO₂, but do not indicate a negative feedback between elevated CO₂ and soil N availability. Elevated O₃ decreased gross N mineralization (−16%) and had no effect on NH ₄ ⁺ immobilization, indicating reduced N availability under elevated O₃. The effects of CO₂ and O₃ on N mineralization rates were mainly related to changes in litter production, whereas effects on N immobilization were likely influenced by changes in litter chemistry and production. Our findings also indicate that concomitant increases in atmospheric CO₂ and O₃ could lead to a negative feedback on N availability.     

Root dynamics and demography in shortgrass steppe under elevated CO2, and comments on minirhizotron methodology

The dynamics and demography of roots were followed for 5 years that spanned wet and drought periods in native, semiarid shortgrass steppe grassland exposed to ambient and elevated atmospheric CO₂ treatments. Elevated compared with ambient CO₂ concentrations resulted in greater root‐length growth (+52%), root‐length losses (+37%), and total pool sizes (+41%). The greater standing pool of roots under elevated compared with ambient CO₂ was because of the greater number of roots (+35%), not because individuals were longer. Loss rates increased relatively less than growth rates because life spans were longer (+41%). The diameter of roots was larger under elevated compared with ambient CO₂ only in the upper soil profile. Elevated CO₂ affected root architecture through increased branching. Growth‐to‐loss ratio regressions to time of equilibrium indicate very long turnover times of 5.8, 7.0, and 5.3 years for control, ambient, and elevated CO₂, respectively. Production was greater under elevated compared with ambient CO₂ both below‐ and aboveground, and the above‐ to belowground ratios did not differ between treatments. However, estimates of belowground production differed among methods of calculation using minirhizotron data, as well as between minirhizotron and root‐ingrowth methods. Users of minirhizotrons may need to consider equilibration in terms of both new growth and disappearance, rather than just growth. Large temporal pulses of root initiation and termination rates of entire individuals were observed (analogous to birth–death rates), and precipitation explained more of the variance in root initiation than termination. There was a dampening of the pulsing in root initiation and termination under elevated CO₂ during both wet and dry periods, which may be because of conservation of soil water reducing the suddenness of wet pulses and duration and severity of dry pulses. However, a very low degree of synchrony was observed between growth and disappearance (production and decomposition).     

Decades-long effects of high CO<Subscript>2</Subscript> concentration on soil nitrogen dynamics at a natural CO<Subscript>2</Subscript> spring

The effects of high atmospheric CO₂ concentration ([CO₂]) on ecosystem processes have been explored using temporal facilities such as open-top-chambers and free-air CO₂ enrichment. However, the effects of high [CO₂] on soil properties takes decades and may not be captured by short-term experiments. Natural CO₂ springs provide a unique opportunity to study the long-term effects of high [CO₂]. In this study, we investigated soil properties at a natural CO₂ spring. We found that the amounts of total carbon (C) and nitrogen (N) stored in the soil at the high [CO₂] site exceeded those in the reference site by 60 and 30%, respectively. The effects of high [CO₂] were large in the upper slope position where the canopy openness was high and plants grew faster, but no effects were detected in the lowest position where the canopy openness was lower (half of that at the upper slope position). In contrast, effects of high [CO₂] on soil N dynamics, such as N mineralization and nitrification rates, did not exhibit a slope gradient. This suggests that effects of high [CO₂] differed among soil stoichiometric characteristics and N dynamics. These complicated effects of high [CO₂] imply that the future effects of high [CO₂] on ecosystems could vary widely in conjunction with environmental conditions such as light availability and/or topographic conditions.     

Soil carbon and nitrogen cycling and storage throughout the soil profile in a sweetgum plantation after 11 years of CO2‐enrichment

Increased partitioning of carbon (C) to fine roots under elevated [CO₂], especially deep in the soil profile, could alter soil C and nitrogen (N) cycling in forests. After more than 11 years of free‐air CO₂ enrichment in a Liquidambar styraciflua L. (sweetgum) plantation in Oak Ridge, TN, USA, greater inputs of fine roots resulted in the incorporation of new C (i.e., C with a depleted δ¹³C) into root‐derived particulate organic matter (POM) pools to 90‐cm depth. Even though production in the sweetgum stand was limited by soil N availability, soil C and N contents were greater throughout the soil profile under elevated [CO₂] at the conclusion of the experiment. Greater C inputs from fine‐root detritus under elevated [CO₂] did not result in increased net N immobilization or C mineralization rates in long‐term laboratory incubations, possibly because microbial biomass was lower in the CO₂‐enriched plots. Furthermore, the δ¹³CO₂ of the C mineralized from the incubated soil closely tracked the δ¹³C of the labile POM pool in the elevated [CO₂] treatment, especially in shallower soil, and did not indicate significant priming of the decomposition of pre‐experiment soil organic matter (SOM). Although potential C mineralization rates were positively and linearly related to total SOM C content in the top 30 cm of soil, this relationship did not hold in deeper soil. Taken together with an increased mean residence time of C in deeper soil pools, these findings indicate that C inputs from relatively deep roots under elevated [CO₂] may increase the potential for long‐term soil C storage. However, C in deeper soil is likely to take many years to accrue to a significant fraction of total soil C given relatively smaller root inputs at depth. Expanded representation of biogeochemical cycling throughout the soil profile may improve model projections of future forest responses to rising atmospheric [CO₂].     

Carbon and Nitrogen Mineralization of Lead Treated Soils in the Eastern Mediterranean Region,Turkey

The aim of this study was to determine the first effect of lead on microbial activity in soil. The study was carried out in the soil samples from four different radish (Raphanus sativus L. var. radicula, Brassicaceae) fields along the highway in a district (Kadirli, Osmaniye) of the Eastern Mediterranean Region, Turkey. After the calculation of Pb contents, the Pb amounts of the soil samples were brought up to 50 and 100 mg Pb kg^?1 by treatment with Pb(NO ₃ ) ₂ , and the samples for the carbon and the nitrogen mineralization were incubated under controlled conditions (28°C, constant moist). The carbon mineralization was determined by a CO ₂ respiration method for 30 days. The nitrogen mineralization was observed in vitro for 6 weeks. The untreated group was statistically different from the 50 and 100 mg Pb kg^?1 treatments in the aspect of the C(CO ₂ ) outlet during mineralization (P ≤ 0.05), but difference between the 50 and 100 mg Pb kg^?1 treatments was not significant. NH ₄ -N and NO ₃ -N contents of each soil were shown differences between across treatments. Based on these results, it is possible to conclude that the addition of 50 and 100 mg Pb kg^?1 provided a toxic effect threshold for the microbial activity into 30 days.     

Soil–Nitrogen Cycling in a Pine Forest Exposed to 5 Years of Elevated Carbon Dioxide

Empirical and modeling studies have shown that the magnitude and duration of the primary production response to elevated carbon dioxide (CO₂) can be constrained by limiting supplies of soil nitrogen (N). We have studied the response of a southern US pine forest to elevated CO₂ for 5 years (1997–2001). Net primary production has increased significantly under elevated CO₂. We hypothesized that the increase in carbon (C) fluxes to the microbial community under elevated CO₂ would increase the rate of N immobilization over mineralization. We tested this hypothesis by quantifying the pool sizes and fluxes of inorganic and organic N in the forest floor and top 30 cm of mineral soil during the first 5 years of CO₂ fumigation. We observed no statistically significant change in the gross or net rate of inorganic N mineralization and immobilization in any soil horizon under elevated CO₂. Similarly, elevated CO₂ had no statistically significant effect on the concentration or flux of organic N, including amino acids. Microbial biomass N was not significantly different between CO₂ treatments. Thus, we reject our hypothesis that elevated CO₂ increases the rate of N immobilization. The quantity and chemistry of the litter inputs to the forest floor and mineral soil horizons can explain the limited range of microbially mediated soil–N cycling responses observed in this ecosystem. Nevertheless a comparative analysis of ecosystem development at this site and other loblolly pine forests suggests that rapid stand development and C sequestration under elevated CO₂ may be possible only in the early stages of stand development, prior to the onset of acute N limitation.