Density and distribution of water boatmen and brine shrimp at a major shorebird wintering area in Puerto Rico

The Cabo Rojo salt flats are an important wintering area for migratory shorebirds. Their quality is intimately related to prey availability, as prey are needed to meet energetic requirements. Understanding prey dynamics is, therefore, a key element of shorebird conservation plans. To this end, we monitored the density and distribution of water-boatmen (Trichocorixa spp.) and brine shrimp (Artemia spp.) in relation to water salinity from September to November of 1994 and 1995. Salinity ranged from 4 to 292 ppt, and gradients were related to hydrological alterations (e.g., salt extraction) and connection to the ocean. Brine shrimp were restricted to areas of highest salinity ( 106 ppt), whereas water-boatmen to areas of lowest salinity (< 65 ppt). We used aquaria experiments to discern potential mechanisms influencing density and distribution of water boatmen. We focused on this species because its caloric value is similar to the brine shrimp's, but it occurs in areas of lower salinity where shorebirds are less prone to hyperosmotic stress. We hypothesized that areas devoid of water boatmen exceeded their tolerance limit, and that these limits could hamper survival as individuals move among areas. Experiments showed that an increase of 8.5 ± 2.1 ppt, when the base salinity was 40 ppt, induced a 50% mortality rate. From a base salinity of 55 ppt, median survival time decreased curvilinearly across salinity concentrations of 65 to 195 ppt. Median survival was lowest > 100 ppt. Lowering water salinity did not result in osmolal related mortality. Results underscored the sensitivity of water boatmen to high salinity, particularly when the difference in salinity between the source and destination localities widened. Water boatmen density increased in one lagoon as salinity decreased from 65 to 47 ppt. On the basis of our experiments, local adult survivorship improved and immigration and subsequent survival of adults, if any, was not hindered. The density of nymphs also suggested that hatching occurred concurrently. The foraging value of the salt flats can be enhanced by maintaining salinity at < 65 ppt in selected management units and minimizing differences in salinity concentrations among them.     

Like herbivores,parasitic plants are limited by host nitrogen content

Herbivores generally benefit from increased plant nitrogen content, because the nitrogen content of animals is much higher than that of plants. Consequently, high plant nitrogen alleviates the profound stoichiometric imbalance that herbivores face in their diets. Parasitic plants provide the opportunity to test this generalization for consumers across kingdoms. We fertilized two microhabitats in a California salt marsh that were dominated by Salicornia virginica or a mixture of S. virginica and Jaumea carnosa. The nitrogen content of both host plants and of the holoparasite Cuscuta salina (dodder) increased in fertilized plots in both microhabitats. Cuscuta preferred to attack Jaumea, although Jaumea had lower nitrogen content than Salicornia. When host nitrogen content was altered by fertilizing plots, however, the percent cover of the parasite doubled. Although parasitic plants and their hosts have similar tissue nitrogen contents, suggesting no stoichiometric imbalance between host and consumer, parasitic plants do not feed on host tissue, but on host xylem and phloem, which are very low in nitrogen. Consequently, parasitic plants face the same dietary stoichiometric constraints as do herbivores, and both herbivores and holoparasitic plants may respond positively to increases in host nitrogen status.     

Small-scale resource heterogeneity among halophytic plant species in an upper salt marsh community

The focus of the present study was to determine whether spatial and temporal variation, in soil and plant factors of upper salt marsh areas, exists among microsites of three coexisting halophytic plant species, Grindelia humilis, Jaumea carnosa and Limonium californicum, on the Pacific coasts of California. Low frequencies in tidal inundations coupled with variation in temperature and rainfall patterns often result in wide seasonal salinity variations in these upper salt marsh zones. The study was carried out to evaluate (1) variation in soil osmolalities and soil water contents for the three species; (2) differences in chemical soil factors associated with the three species; (3) variation in leaf succulence associated with saline stress; and (4) levels of plant nutrients present in each of the three species. The results indicated that soil osmolalities associated with Limonium, a salt excreting halophyte were markedly different from those recorded for the other two species. Nitrogen levels in soils associated with Jaumea as well as levels in composite plant samples were significantly lower than those of the other two species. Also noted were variations in nutrient ions in plants as well as soil environments.     

Linear differentiation of cereal chromosomes

Summary Using the Giemsa technique of differential staining (the BSG test), we have studies the karyotypes and constructed the idiograms of T. aestivum L. var. Diamant and Chinese Spring, T. Monococcum L. v. hornemannii ssp. roles occidentali georgicum Dek., Aegilops squarrosa L. v. Meeyeri, T. aestivum. The karyotypes of Chinese Spring and Diamant differ drastically both in total structural heterochromatin content and its localization on the nine morphologically homeologous chromosomes. The rest of the twelve pairs of chromosomes showed no morphological similarity. This indicates considerable differences in the phylogeny of the varieties, and also an absence of unique karyotype in T. aestivum.Three chromosomes of Ae. Squarrosa are similar to those of Chinese Spring, yet, on the whole, the chromosomal structural specificity of the diploids studied is so high that we fail to understand the nature of the homology between common wheat and its supposed diploid ancestors.The role of introgression in the evolution of the genomes of Triticum and Aegilops, and also the meaning of the conjugation and BSG tests in resolving the phylogeny, is discussed.     

Preliminary crystallographic analysis of the Cks protein p13suc1P90AP92A from Schizosacharromyces pombe

The p13^suc1 is the fission yeast member of the Cks (Cdc28-dependant kinase subunit) family of proteins. The Cks proteins bind to and are required for the function of cyclin-dependant kinase (Cdk) proteins during cell cycle progression in eukaryotic cells. Two conformations of Cks have been detected crystallographically; a compact monomer with the C-terminal fourth -strand inserted into the core of the molecule between strands 2 and 3, and a strand-exchanged dimer where the fourth -strand is inserted into the core of the dimer partner in an equivalent position. There is a highly conserved hinge region consisting of the motif PEP, N-terminal to the fourth -strand. In the monomer this motif constitutes a -turn, while in the dimeric structure it is extended, allowing strand exchange. The mutant protein p13^suc1P90AP92A, in which alanine residues replace both prolines of the turn, provides an opportunity to examine the role of the prolines in this hinge region and how they may allow for the formation of strand-exchanged dimers by Cks proteins. We have expressed and purified this mutant protein. Two millimolar p13^suc1P90AP92A crystallised in 50 mM tris(hydroxymethyl)aminomethane pH 7.5, 30% poly(ethylene glycol) 1500. Diffraction data were collected at room temperature on an MAR345 image plate using Cu K radiation from a Rigaku RU200 rotating-anode generator source to 2.70Å. The crystal has unit cell parameters a=b=75.1 Å, c=34.9 Å, ==90°, =120°. Diffraction data were indexed to the space group P6 and systematic absences 00l indicate a screw axis consistent with P6₃.     

Mutant of Escherichia coli with unusual patterns of rpoB,C expression in response to rifampicin and acridine orange

Summary A mutation located near rpoB (89) in E. coli is responsible for unusual patterns of and (but not L7/L12) synthesis in response to the drugs rifampicin and acridine orange.     

Synthesis ofα-triazolylα-amino acid derivatives

Summary We report the synthesis of-triazolyl-amino esters by 1,3 dipolar cycloaddition of acetylenic compounds and-azido-amino esters.     

Agrobacterium-mediated transformation of white clover using direct shoot organogenesis

Summary White clover (Trifolium repens L.) plants from the cultivars Grasslands Huia and Grasslands Tahora have been transformed using Agrobacterium-mediated T-DNA transfer. Transgenic plants regenerated directly from cells of the cotyledonary axil. To transform white clover, shoot tips from 3 day old seedlings were co-cultivated with A. tumefaciens strain LBA4404 carrying the plasmid vector pPE64. This vector contains the neomycin phosphotransferase II gene (nptII) and -glucuronidase reporter gene (gus) both under the control of the CaMV 35S promoter. Kanamycin-resistant plants regenerated within 42 days after transfer onto selective media. Integration of the nptII and gus genes into the white clover genome was confirmed using Southern blotting, and histochemical analysis indicated that the gus gene was expressed in a variety of tissues. In reciprocal crosses between a primary transformant and a non-transformed plant the introduced gus gene segregated as a single dominant Mendelian trait.Abbreviations BAP 6-benzylaminopurine - NAA -naphthaleneacetic acid - MS Murashige and Skoog - GUS -glucuronidase - X-GLUc 5-bromo-4-chloro-3-indolyl--D-glucuronide - MUG methylumbelliferyl--D-glucuronide - CaMV Cauliflower Mosaic Virus - NPTII neomycin phosphotransferase II - OCS octopine synthase - 4-MU 4-methyl umbelliferone     

Cell wall teichoic acids from Streptomyces daghestanicus VKM Ac-1722T and streptomyces murinus INA-00524T

The structure of cell wall teichoic acids was studied by chemical methods and NMR spectroscopy in the type strains of two actinomycete species of the Streptomyces griseoviridis phenetic cluster: streptomyces daghestanicus and streptomyces murinus. S. daghestanicus VKM Ac-1722^t contained two polymers having a 1,5-poly(ribitol phosphate) structure. In one of them, the ribitol units had -rhamnopyranose and 3-O-methyl--rhamnopyranose substituents; in the other, each ribitol unit was carrying 2,4-ketal-bound pyruvic acid. Such polymers were earlier found in the cell walls of Streptomyces roseolus and Nocardiopsis albus, respectively; however, their simultaneous presence in the cell wall has never been reported. The cell wall teichoic acid of Streptomyces murinus INA-00524^T was a 1,5-poly(glucosylpolyol phosphate), whose repeating unit was [-6)--D-glucopyranosyl-(12)-glycerol phosphate-(3-P-]. Such a teichoic acid was earlier found in Spirilliplanes yamanashiensis. The ¹³C NMR spectrum of this polymer is presented for the first time. The results of the present investigation, together with earlier published data, show that the type strains of four species of the Streptomyces griseoviridis phenetic cluster differ in the composition and structure of their teichoic acids; thus, teichoic acids may serve as chemotaxonomic markers of the species.Translated from Mikrobiologiya, Vol. 74, No. 1, 2005, pp. 48–54.Original Russian Text Copyright © 2005 by Streshinskaya, Kozlova, Alferova, Shashkov, Evtushenko.     

Coastline ecosystems on Oahu,Hawaii

Summary Coatline ecosystems on Oahu, Hawaii were described in terms of vegetation composition and structure, and environmental components such as climate, physiography, exposure, substratum, and ground water. Vegetation patterns were related to these environmental components. Relevés were established in 22 study areas around Oahu to study the broader patterns of vegetation and environment, and 2 m wide belt-transects were laid out in 16 areas to study structural and floristic zonation from the ocean edge to the limit of the strand flora inland. Physiographic position, substrate type, wind exposure and climate (through climate-diagrams) were determined for each site. Soil parameters determined along the transects were salt concentration, pH, organic carbon, moisture equivalent, soil moisture at 15 atmospheres pressure, and available moisture.Three levels of pattern in vegetation distribution were inferred. First, there were similarities and differences between study areas in terms of vegetation composition and structure, and environmental components. Thirteen ecosystem-classes were recognized on the bases of dominant species and landform: Hibiscus ecosystem on beach flat, Scaevola on dunes, Scaevola on talus and alluvium, Scaevola on raised coral rock, Scaevola on rocky basalt coast, Chloris-Sida on talus, Prosopis on dunes, Prosopis on talus and alluvium, Prosopis on tuffaceous headland, Chloris-Prosopis on dune and clay flat complex, Batis on mud flats, Rhizophora on tidal flats, and Scirpus-Eichornia in fresh-water pond.A second level of pattern was that of zonation into physiognomic zones, and a third that of floristic zonation or change in species composition with distance from sea. Only seven ecosystems, representing five ecosystem-classes (Scaevola on dunes, Scaevola on coral rock, Prosopis on dunes, Prosopis on talus and alluvium, and Prosopis on tuffaccous headland), showed distinct physiognomic zones. But all emerged ecosystems showed floristic zonation.The distribution of the ecosystems coastwise is most broadly related to rainfall and drought patterns, to exposure to wind and surf, and to salinity of soil and water. Hibiscus ecosystems occur in wet, protected beach flats of terrigenous sand, found in windward coasts; Scaevola ecosystems in areas exposed to intense wind and salt spray; Prosopis ecosystems and their variant, Chloris-Prosopis ecosystem, in droughtly areas of the leeward coast; Chloris-Sida ecosystem on rocky soils in the same droughty climate; Batis ecosystems on mud flats of high soil- and ground-water salinity; Rhizophora ecosystems in protected shorelines subject to tides; and Scirpus-Eichornia ecosystem in still fresh water.Salt concentration decreased markedly with distance inland in fine-textured soils, but showed only slight increases or decreases in coarse-textured dune soils. Organic matter showed increases, with three transects registering increases of 15% organic C at peak portions. pH was very variable; alkaline values arising largely from a high proportion of calcium carbonate parent material or high salt content and more acid values arising from greater organic matter incorporation. The range of many of the strand species has been increasingly limited by direct disturbance and indirectly by the seaward encroachment of introduced Prosopis. But they are still persisting (in larger or smaller numbers) in Scaevola ecosystems.     

Ultrastructural and biochemical study of extracellular matrix vesicles in normal alveolar bone of rats

Summary The immunocharacteristics of androgen target cells in the anterior pituitary of male rats are assessed by a combined thaw-mount autoradiography and immunoperoxidase staining method permitting the simultaneous identification of steroid-hormone target cells and protein or polypeptide hormone-producing cells in the same preparation. After injection of ³H-dihydrotestosterone, nuclear concentration of radioactivity is observed in cells of the anterior lobe, in ectopic cells in the intermediate and posterior lobes as well as in certain pituicytes. The radioactively labeled cells in the anterior lobe are identified immuno-histochemically as gonadotropes and thyrotropes with the use of antiserum to ovine LH or its subunit -LH and bovine -TSH. The results suggest genomic effects of androgen on gonadotropes and thyrotropes as well as pituicytes.Supported by U.S. PHS Grant NS09914     

Flowering in Vitis: Conversion of tendrils into inflorescences and bunches of grapes

Inflorescences and fruits with viable seeds were produced in place of tendrils in plants of Vitis vinifera L. cv. Muscat of Alexandria and in a staminate hybrid grapevine (Vitis vinifera x V. rupestris Scheele) following repeated applications of 10–20 l of 50–200 M 6-(benzylamino)-9-(2-tetrahydropyranyl)-9H-purine (PBA) to apices. Young leaves, shoot tips and axillary buds were removed before the PBA treatments were commenced. The number and weight of berries produced by inflorescences derived from tendrils was closely correlated with the number and area of leaves retained. When application of PBA was continued after floral initiation there was formation of fused flowers and cleistogamous pollination.     

Onychomycosis caused by Scopulariopsis brumptii

Scopulariopsis brumptii was isolated from nail lesions in left hand of a 42 year-old-farmer. The direct microscopic examination of the nail samples revealed light brown, septate, branched fungal hyphae along with thick-walled spherical cells. The histopathological examination showed involvement of internal phase of the nail plate. Amongst the antimycotics tested against S. brumptii In vitro oxiconazole was found to be the most active with MIC value of 10 g/ml^–1. This report documents the first instance of onychomycosis caused by S. brumptii.     

Water stress-induced oxidative damage and antioxidant responses in micropropagated banana plantlets

Oxidative injury and antioxidant responses were investigated in two banana genotypes (Musa AAA Berangan and Musa AA Mas) subjected to 40 % PEG-induced water stress. PEG treatment resulted in oxidative injury, as expressed in increased lipid peroxidation and reduced membrane stability index, in both cultivars; however, greater oxidative injury was detected in Mas. Under PEG treatment, catalase activity and glutathione reductase activity were enhanced in both cultivars, but were higher in Mas. Ascorbate peroxidase activity was enhanced in Berangan under water stress, but was unaffected in Mas. Meanwhile, superoxide dismutase activity was inhibited in both cultivars under water stress, but higher activity was detected in Berangan. Higher ascorbate peroxidase and superoxide dismutase activities were associated with greater protection against water stress-induced oxidative injury.     

Cytochemical evidence for the leakage of acid phosphatase through ultrastructurally intact lysosomal membranes

Synopsis Fixation under improper conditions ofin vitro cultivated cells results in an extensive diffusion of the lysosomal enzyme acid phosphatase because of the influence of a low effective osmotic pressure. In the present investigation, advantage was taken of this predictable diffusion in order to establish whether or not leakage of acid phosphatase could take place through ultrastructurally intact lysosomal membranes.In order to reveal small holes in the lysosomal membranes, secondary lysosomes were labelled with thorium dioxide particles, which were presumed to appear free in the cell sap if ruptures in the membranes larger than about Ioo Å were created.The experiments revealed that following the fixation ofin vitro cultivated human glia cells under improper conditions, mitochondria and ground cytoplasm show considerable swelling artifacts, while secondary lysosomes appear to be essentially unaffected. The lysosomes, nevertheless, apparently lost most of their content of acid phosphatase, as judged from enzyme cytochemical studies. These findings indicate that leakage of acid phosphatase from ultrastructurally intact lysosomes is possible.     

Pyridoxal 5′-phosphate binds to a lysine residue in the adenosine 3′-phosphate 5′-phosphosulfate recognition site of glycolipid sulfotransferase from human renal cancer cells

In the course of characterization of glycolipid sulfotransferase from human renal cancer cells, the manner of inhibition of sulfotransferase activity with pyridoxal 5-phosphate was investigated. Incubation of a partially purified sulfotransferase preparation with pyridoxal 5-phosphate followed by reduction with NaBH₄ resulted in an irreversible inactivation of the enzyme. When adenosine 3-phosphate 5-phosphosulfate was co-incubated with pyridoxal 5-phosphate, the enzyme was protected against this inactivation. Furthermore, pyridoxal 5-phosphate was found to behave as a competitive inhibitor with respect to adenosine 3-phosphate 5-phosphosulfate with aK _i value of 287 µm. These results suggest that pyridoxal 5-phosphate modified a lysine residue in the adenosine 3-phosphate 5-phosphosulfate-recognizing site of the sulfotransferase.     

Structural evidence that the small subunit found associated with the TL antigen is β 2-microglobulin

Comparative tryptic peptide mapping and partial amino-terminal primary sequence analysis of the light chain component associated with the TL antigens showed that the small subunit of TL was identical to the ₂m light chain associated with the H-2K or D product of the same strain. Peptide comparison of the ₂m from the Tla products of an A strain X-ray induced leukemia RADA1 (Tla ^a) and of a C57BL/6 strain X-ray induced leukemia ERLD (Tla ^b) showed differences to the extent of 25–35% in their peptides. This is consistent with previous results showing ₂m allelic variations between these mouse strains. The data prove the structural identity of the ₂m molecules from TL and H-2K, D antigens as well as reveal the strain specific polymorphism of the ₂m associated with these products.     

Prediction of the Secondary Structure Contents of Globular Proteins Based on Three Structural Classes

The prediction of the secondary structural contents (those of -helix and -strand) of a globular protein is of great use in the prediction of protein structure. In this paper, a new prediction algorithm has been proposed based on Chou's database [Chou (1995), Proteins 21, 319–344]. The new algorithm is an improved multiple linear regression method, taking into account the nonlinear and coupling terms of the frequencies of different amino acids and the length of the protein. The prediction is also based on the structural classes of proteins, but instead of four classes, only three classes are considered, the class, class, and the mixed + and / class or simply the class. Thus the ambiguity that usually occurs between + proteins and / proteins is eliminated. A resubstitution examination for the algorithm shows that the average absolute errors are 0.040 and 0.035 for the prediction of -helix content and -strand content, respectively. An examination of cross-validation, the jackknife analysis, shows that the average absolute errors are 0.051 and 0.045 for the prediction of -helix content and -strand content, respectively. Both examinations indicate the self-consistency and the extrapolating effectiveness of the new algorithm. Compared with other methods, ours has the merits of simplicity and convenience for use, as well as high prediction accuracy. By incorporating the prediction of the structural classes, the only input of our method is the amino acid composition and the length of the protein to be predicted.     

Cloning of the Genes for DNA Methyltransferases of the SfaNI and Bst19I Restriction–Modification Systems and Primary Structure Analysis of Protein Products

The Streptococcus faecalis ND547 and Bacillus stearothermophilus 19 genes that code for DNA methyltransferases (MTases, M.) of restriction–modification (RM) systems with the same recognition sequence, 5-GCATC-3 were cloned and sequenced. The Bst19I RM system includes two MTases, M1.Bst19I and M2.Bst19I. The SfaNI RM system has only one MTase, M.SfaNI, whose N and C domains are homologous to M2.Bst19I and M1.Bst19I, respectively. Both M1.Bst19I and M2.Bst19I and the two domains of M.SfaNI contain conserved elements, which are arranged in the order characteristic of class N6-adenine MTases. The enzymes of the SfaNI and Bst19I RM systems proved to be highly homologous to their FokI and BstF5I counterparts, which was explained by the presence of the common tetranucleotide 5-GATG-3 in their recognition sites. Based on sequence homology, the spatial arrangement of highly conserved amino acid residues was determined using the known three-dimensional model of M.DpnIIA, which belongs to the same MTase class.