Human embryonic stem cells create their own niche

Experimental evidence demonstrates that the ability of stem cells to self-renew and to differentiate into different types of mature cells depends on both their intrinsic genetic programs and external control from their microenvironment or niche. The concept of stem cell niche was first proposed by Schofield in 1978 to describe a microenvironment that supports stem cells in a mammalian hematopoietic system. Over the last 30 years, more stem cell niches have been identified in the mammalian system, including the hematopoietic stem cell niche in bone marrow, the epithelial stem cell niche in skin, the intestinal stem cell niche, the neural stem cell niche and the germ line stem cell niche in mice ）. Recently, the concept of stem cell niche is further defined. The niche must have both anatomic and functional dimensions and may be composed of heterologous cell types, extracellular matrix, paracrine factors or non-protein metabolites . More recently, it was shown that disruption in the niche of hematopoietic stem cells leads to the development ofmyeloproliferative disease . It becomes obvious that a stem cell niche is not static, but dynamic, and can be modified or even created. Although stem cell niche has emerged as critical as stem cell autonomous functions for both our understanding of stem cell biology and the application of stem cells in medicine, a niche for human embryonic stem （hES） cells was not clearly shown until recently Bendall et al demonstrated that IGF and FGF cooperatively establish the regulatory stem cell niche of pluriootent human cells in vitro.[第一段]     

Sexual Dimorphism of Head Size in Phrynocephalus przewalskii: Testing the Food Niche Divergence Hypothesis

Sexual size dimorphism （SSD） is a general phenomenon in lizards, and can evolve through sexual selection or natural selection. But natural selection, which was thought to operate mainly through reducing the competition be- tween the two sexes （niche divergence hypothesis）, gave rise to a lot of controversy. We tested the niche divergence hypothesis in the toad-headed lizard Phrynocephalus przewalskii by comparing diet composition and prey sizes between males and females. The species was found to be sexual dimorphic, with males having relatively larger snout-vent length, head width, head length, and tail length, while females have relatively larger abdomen length. Based on analysis of 93 studied stomachs, a total of 1359 prey items were identified. The most common prey items were formicid, lygaeid and tenebrionid. The two sexes did not differ in the relative proportions of prey size categories they consumed and the dietary overlap based on prey species was high （O = 0.989）. In addition, the meal size, the volume or any maximal dimension of the largest prey item in the stomach was not explained by the sexes. According to our results, food niche divergence might not play an important role in the SSD evolution ofP. przewalskii.     

Diet composition of the lizard P odarcis lilfordi (Lacertidae) on 2 small islands: an individualresource network approach

Despite it is widely accepted that intrapopulation variation is fundamental to ecological and evolutionary processes,this level of information has only recently been included into network analysis of species/population interactions.When done,it has revealed non-random patterns in the distribution of trophic resources.Nestedness in resource use among individuals is the most recurrent observed pattern,often accompanied by an absence of modularity,but no previous studies examine bipartite modularity.We use network analysis to describe the diet composition of the Balearic endemic lizard Podarcis lilfordi in 2 islets at population and individual levels,based on the occurrence of food items in fecal samples.Our objectives are to 1)compare niche structure at both levels,2)characterize niche partition using nestedness and modularity,and 3)assess how size,sex,season,and spatial location influence niche structure.At population-level niche width was wide,but narrow at the level of the individual.Both islet networks were nested,indicating similar ranking of the food preferences among individuals,but also modular,which was partially explained by seasonality.Sex and body size did not notably affect diet composition.Large niche overlap and therefore possibly relaxed competition were observed among females in one of the islets and during spring on both islets.Likewise,higher modularity in autumn suggests that higher competition could lead to specialization in both populations,because resources are usually scarce in this season.The absence of spatial location influence on niche might respond to fine-grained spatio-temporally distribution of food resources.Behavioral traits,not included in this study,could also influence resource partitioning.     

Niche regulation of corneal epithelial stem cells at the limbus

Among all adult somatic stem cells,those of the corneal epithelium are unique in their exclusive location in a definedlimbai structure termed Palisades of Vogt.As a result,surgical engraftment oflimbal epithelial stem cells with or withoutex vivo expansion has long been practiced to restore sights in patients inflicted with limbal stem cell deficiency.Neverthe-less,compared to other stem cell examples,relatively little is known about the limbal niche,which is believed to play apivotal role in regulating self-renewal and fate decision of limbal epithelial stem cells.This review summarizes relevantliterature and formulates several key questions to guide future research into better understanding of the pathogenesis oflimbal stem cell deficiency and further improvement of the tissue engineering of the corneal epithelium by focusing onthe limbal niche.     

Effects of Glycerol on the Fluorescence Spectra and Chloroplast Ultrastructure of Phaeodactylum tricornutum （Bacillariophyta）

Responses of the photosynthetic activity of Phaeodactylum tricornutum （Bacillariophyta） to organic carbon glycerol were investigated. The growth rate, photosynthetic pigments, 77 K fluorescence spectra, and chloroplast ultrastructure of P. tricornutum were examined under photoautotrophic, mixotrophic, and photoheterotrophic conditions. The results showed that the specific growth rate was the fastest under mixotrophic conditions. The cell photosynthetic pigment content and values of Chl a/Chl c were reduced under mixotrophic and photoheterotrophic conditions. The value of carotenoid/Chl a was enhanced under mixotrophic conditions, but was decreased under photoheterotrophic conditions. In comparison with photoautotrophic conditions, the fluorescence emission peaks and fluorescence excitation peaks were not shifted. The relative fluorescence of photosystem （PS） Ⅰ and PS Ⅱ and the values of F685/F710 and F685/F738 were decreased. Chloroplast thylakoid pairs were less packed under mixotrophic and photoheterotrophic conditions. There was a strong correlation between degree of chloroplast thylakoid packing and the excitation energy kept in PS Ⅱ. These results suggested that the PS Ⅱ activity was reduced by glycerol under mixotrophic conditions, thereby leading to repression of the photosynthetic activity.     

Niches of plant populations in mangrove reserve of Qi’ao Island, Pearl River Estuary

Thirty-two 10 × 10 m² quadrats were set up in four mangrove communities for the study of the niches of nine plants with horizontal and vertical resource sequences in Dawei Bay, Qi’ao Island, Zhuhai City. Generally, species diversities of natural mangroves were higher than those of plantations. The diversities decreased along sequence of substrate layer, shrub layer and tree layer in natural mangroves; and were highest on the shrub layer in plantations. At the horizontal resource sequence, the niche breadth varied 0.132–0.896 (B_(sw)) and 0.120–0.693 (B_(L)). The niche breadth of Acanthus ilicifolius and Aegiceras corniculatum were the highest and that of Spartina alterniflora was the lowest. At the vertical resource sequence, the niche breadth varied 0–0.400 (B_(sw)) and 0.333–0.747 (B_(L)). All the niche breadth values were the lowest except those of A. ilicifolius and A. corniculatum. The niche similarity of the populations varied 0–0.746 and 0–1.000 at the horizontal and vertical resource sequences, respectively. A. ilicifolius and A. corniculatum had niche overlap with all plants at the horizontal resource sequence, while the introduced Sonneratia caseolaris and Sonneratiaapetala had no such overlapping between six and five plants in the community, respectively. At the vertical resource sequence, A. ilicifolius and A. corniculatum had niche overlapping with all the populations. The more niche overlapping existed among the other populations. The results indicated that, currently, the mangrove plantation in Qi’ao Island had a simplex structure and composition of species. The status of plant populations’ niche was determined by the species selected and structure of afforestation. It is suggested to create forest gaps artificially and introduce Kandelia obovata saplings to reverse its current status of lower niche breadth, facilitate natural regeneration and spreading of A. corniculatum and A. ilicifolius, and accelerate the restoration process of natural mangrove. Simultaneously, the species matching and planting methods of mix stands should be emphasized in the future.     

Niches of plant populations in mangrove reserve of Qi’ao Island, Pearl River Estuary

Thirty-two 10 × 10 m² quadrats were set up in four mangrove communities for the study of the niches of nine plants with horizontal and vertical resource sequences in Dawei Bay, Qi’ao Island, Zhuhai City. Generally, species diversities of natural mangroves were higher than those of plantations. The diversities decreased along sequence of substrate layer, shrub layer and tree layer in natural mangroves; and were highest on the shrub layer in plantations. At the horizontal resource sequence, the niche breadth varied 0.132–0.896 (B_(sw)) and 0.120–0.693 (B_(L)). The niche breadth of Acanthus ilicifolius and Aegiceras corniculatum were the highest and that of Spartina alterniflora was the lowest. At the vertical resource sequence, the niche breadth varied 0–0.400 (B_(sw)) and 0.333–0.747 (B_(L)). All the niche breadth values were the lowest except those of A. ilicifolius and A. corniculatum. The niche similarity of the populations varied 0–0.746 and 0–1.000 at the horizontal and vertical resource sequences, respectively. A. ilicifolius and A. corniculatum had niche overlap with all plants at the horizontal resource sequence, while the introduced Sonneratia caseolaris and Sonneratiaapetala had no such overlapping between six and five plants in the community, respectively. At the vertical resource sequence, A. ilicifolius and A. corniculatum had niche overlapping with all the populations. The more niche overlapping existed among the other populations. The results indicated that, currently, the mangrove plantation in Qi’ao Island had a simplex structure and composition of species. The status of plant populations’ niche was determined by the species selected and structure of afforestation. It is suggested to create forest gaps artificially and introduce Kandelia obovata saplings to reverse its current status of lower niche breadth, facilitate natural regeneration and spreading of A. corniculatum and A. ilicifolius, and accelerate the restoration process of natural mangrove. Simultaneously, the species matching and planting methods of mix stands should be emphasized in the future.     

Niches of plant populations in mangrove reserve of Qi’ao Island, Pearl River Estuary

Thirty-two 10 × 10 m² quadrats were set up in four mangrove communities for the study of the niches of nine plants with horizontal and vertical resource sequences in Dawei Bay, Qi’ao Island, Zhuhai City. Generally, species diversities of natural mangroves were higher than those of plantations. The diversities decreased along sequence of substrate layer, shrub layer and tree layer in natural mangroves; and were highest on the shrub layer in plantations. At the horizontal resource sequence, the niche breadth varied 0.132–0.896 (B_(sw)) and 0.120–0.693 (B_(L)). The niche breadth of Acanthus ilicifolius and Aegiceras corniculatum were the highest and that of Spartina alterniflora was the lowest. At the vertical resource sequence, the niche breadth varied 0–0.400 (B_(sw)) and 0.333–0.747 (B_(L)). All the niche breadth values were the lowest except those of A. ilicifolius and A. corniculatum. The niche similarity of the populations varied 0–0.746 and 0–1.000 at the horizontal and vertical resource sequences, respectively. A. ilicifolius and A. corniculatum had niche overlap with all plants at the horizontal resource sequence, while the introduced Sonneratia caseolaris and Sonneratiaapetala had no such overlapping between six and five plants in the community, respectively. At the vertical resource sequence, A. ilicifolius and A. corniculatum had niche overlapping with all the populations. The more niche overlapping existed among the other populations. The results indicated that, currently, the mangrove plantation in Qi’ao Island had a simplex structure and composition of species. The status of plant populations’ niche was determined by the species selected and structure of afforestation. It is suggested to create forest gaps artificially and introduce Kandelia obovata saplings to reverse its current status of lower niche breadth, facilitate natural regeneration and spreading of A. corniculatum and A. ilicifolius, and accelerate the restoration process of natural mangrove. Simultaneously, the species matching and planting methods of mix stands should be emphasized in the future.     

Estimating Stem Volume Using QuickBird Imagery and Allometric Relationships for Open Populus xiaohei Plantations

There has been a great deal of interest in studying the crown of trees using remote sensing data. In this study, crown width was extracted from high-resolution QuickBird images for open Populus xiaohei plantations. Regression models for predicting the individual stem volumes of Populus xiaohei were established using extracted crown width, as well as estimated tree parameters （i.e. diameter at breast height [DBH] and tree height） as predictors. Our results indicated that crown width could be accurately extracted from QuickBird images using a multi-scale segmentation approach with a mean relative error of 5.74%, especially for wide-spacing stands. Using either extracted crown width alone or with estimated DBH and tree height can successfully estimate individual stem volume of Populus xiaohei with the R2 value ranging from 0.87 to 0.92 depending on different model forms. In particular, the two second-order polynomial models （model 2 and model 6）, based on QuickBird image-derived crown widths and estimated DBH and tree heights, respectively, were the best at describing the relationship between stem volume and tree characteristics.     

红池坝炼山后生态恢复过程中群落特征研究

This paper studied the species composition and the structure and species diversity of communities in Hongchiba area of Wuxi County after controlled burning and aerial-sowing afforestation. The results showed that after buming and afforestation, pure Pinus armandii forest was not developed, but various mixed needle board-leaved forests which comprised P. armandii and native board-leaved trees grew. Various native species contributed to the communities with great species diversity. Shannon-Wiener index was 2.305～3.145, ecological dominance was 0.063～0.151, and evenness was 0.600～0.749. The natural regeneration of P. armandii population was very poor, and there was a trend that P. armandii would be gradually replaced by other native board-leaved trees. It was demonstrated that P. armandii should not be taken as a unique afforesr tree, and controlled burning was not a favorite ecological measure in subtropical area. Native trees should play more important roles in the process of ecological restoration.     

以光合效率度量天然白桦种群生态位初探

生态位常被理解为“一个生物单位 (个体、种群或物种 )生存条件或适应性的总集合体[3 ,5] 。过去常用于动物种群生态学研究 ,Ｗｈｉｔｔａｋｅｒ首次将生态位理论应用于森林生态学研究[5] 。目前 ,国内外对生态位的研究主要集中在以下方面 :①把生态位与资源利用谱等同起来 ;②生态位占据与竞争联系在一起 ;③生态位是多维空间内具有一定功能的 ,为一个种或种群所占有的功能单位 ,亦即符合该种适合性的小区。这就涉及到“功能单位”的应有宽度及其计测标准和方法 ;④各种有机体均有其在自然群落中的地位、功能作用或某种生活方式 ,它们之间…     

Niche width of above‐ and below‐ground organisms varied in predicting biodiversity profiling along a latitudinal gradient

Biodiversity is the foundation of all ecosystems across the planet, and having a better understanding of its global distribution mechanism could be important for biodiversity conservation under global change. A niche width model, combined with metabolic theory, has successfully predicted the increase of α‐diversity and decrease of β‐diversity in the below‐ground microbial community along an altitudinal mountain gradient. In this study, we evaluated this niche width model of above‐ground plants (mainly trees and shrubs) and below‐ground bulk soil microbial communities (i.e., bacteria and archaea) along a latitudinal gradient of forests in China. The niche widths of both plants and microbes increased with increasing temperature and precipitation, and with proximity to circumneutral pH. However, the α‐ and β‐diversities (observed richness and Bray–Curtis dissimilarity, respectively) could not be accurately predicted by a single niche width model alone, either temperature, precipitation or pH. Considering the interactions among different niche width models, all three niche width models were combined to predict biodiversity at the community level using structural equation modelling. The results showed that the niche width model of circumneutral pH was most important in predicting diversity profiling (i.e., α‐ and β‐diversity) for both plants and microbes, while niche width of precipitation and temperature showed both direct and indirect importance for microbe and plant biodiversity, respectively. Because the current niche width model neglects several scenarios related to taxon and environmental attributes, it still needs to be treated with caution in predicting biodiversity trends.     

浙江金华市郊地面苔藓植物生态位研究

在金华市郊不同生境设立30个样点。调查发现共有67种地面苔藓植物。计测了其中的54个主要种类的生态位重叠值和宽度,以生态位重叠值为指标,应用最小生成树法和主坐标排序法对它们进行分类。结果发现,金华市郊的地面生苔藓植物可被分成3个生态类群,苔藓植物种数(N)与生态位宽度(B)符合:N=27.304e 11.425B(R2=0.9915),大部分的地面生苔藓植物生态位宽度很窄。     

树冠覆膜对金柑光合作用及果实品质的影响

树冠覆膜技术已在金柑生产中得到广泛应用。该研究以阳朔金柑为材料,树冠覆膜作为处理,不覆膜作为对照,分别测定处理和对照的树冠的温度、湿度和光照强度等环境因子的变化,观测处理和对照的叶面积、叶长、叶宽及叶绿素含量,测定处理和对照的净光合速率、气孔导度、蒸腾速率和胞间二氧化碳浓度等光合作用指标,并分析处理和对照的果实硬度、可溶性固形物、总糖、可滴定酸及维生素C含量等果实品质指标。结果表明:与对照相比,金柑树冠覆膜处理后,树冠的光照强度降低、温度上升、湿度下降、叶面积增大、叶绿素含量提高,净光合速率下降且最大降幅是对照的21.39%,果实的可滴定酸降低,但硬度、可溶性固形物、总糖、固酸比及糖酸比等果实品质指标提高。金柑树冠覆膜处理减少了树冠的光照,降低了净光合速率,但增加了叶面积和叶绿素含量,从而保障了光合同化物的累积,提高了果实的可溶性固形物和总糖。同时,树冠覆膜处理还提高了树冠白天的气温,降低了可滴定酸,增大了固酸比和糖酸比,因此从总体上提高了果实品质。     

Variability of photosynthetic capacity and water relations of <Emphasis Type="Italic">Pinus sylvestris</Emphasis> L. in the field

Measurements of dependence of photosynthetic electron transport on irradiance and analyses of stable isotope ratios (δ¹⁸O, δ¹³C, δ¹⁵N) were performed on 4 to 6-year-old pine trees (Pinus sylvestris L.) in the primeval forest reserve of Białowieża and on 21-year-old pine trees of a plantation of different provenances at the Sękocin Forest Station near Warsaw, Poland. Small differences in maximum photosynthetic electron transport rates, ETR_max were related to growth. Stable isotope analyses suggest that water relations play an important role for the performance of P. sylvestris at the sites studied. The intraspecific comparisons showed a very high variability of photosynthetic capacity between needles of given trees and between individual trees under similar conditions. Differences between specific provenances were also observed. This is relevant for ecological niche occupation in a wide geographical growth range, where P. sylvestris is actually occurring. The high physiological plasticity demonstrated reveals a conspicuous trait of this tree species.     

荒漠草原柠条林地黑胸茧蜂对豆荚螟的追踪作用

对豆荚螟寄生蜂———黑胸茧蜂Bracon nigrorufum Cushman与豆荚螟Etiella zinchenella Treitschke在空间分布、生态位、豆荚螟密度与寄生率的关系等寄生适应性进行研究。结果表明,黑胸茧蜂与豆荚螟不但在柠条林间的分布型十分吻合,且在单株柠条植株上的分布也相似;在树冠上、中、下3层中,均以上部聚集度最大、密度最高;在树冠东、南、西、北4个方位中,均以南方聚集度最大、密度最高。树冠上层黑胸茧蜂的寄生率高于中、下层,东面寄生率高于其他3个方位;豆荚螟密度与黑胸茧蜂寄生率为非线性的负相关关系。二者生态位宽度、重叠度和种间竞争系数较大,说明黑胸茧蜂对豆荚螟有较强的追随关系,控制力较强。     

Environmental,structural, and taxonomic diversity factors drive aboveground carbon stocks in semi-deciduous tropical rainforest strata in Cameroon

Forest stratification plays a crucial role in the interception of light and plants' photosynthetic activities. However, there is still a lack of information on the contribution of tropical forest stratification to its functioning, despite the increasing number of studies. Here, we analysed from a perspective of the whole tree community (WTC) and forest strata (i.e., large trees, understory trees, and small stems), the relationship between abiotic, biotic factors and aboveground Carbon (AGC). The abiotic factors-AGC relationships were positive for all strata and WTC. However, soil factors-AGC relationship was stronger for small stems and understorey, while topography factor-AGC relationship was stronger for large trees and WTC. Tree size inequality-AGC relationship was positive and much stronger for WTC, large trees and small stems. In addition, a species diversity-AGC relationship was found positive only for large trees and WTC. These results highlight the niche complementarity effect for driving positive relationships of species diversity and individual tree size variation with aboveground biomass at large tree strata and WTC. The lack of positive effect of species diversity on AGC for understorey and small stems strata might be attributable to the selection effect or resource complementarity among species.     

三种森林生态系统昆虫病原真菌优势种生态位比较

研究了天然阔叶林、天然阔叶次生林和马尾松人工纯林3种不同森林生态系统中昆虫病原真菌优势种的数量组成及生态位宽度和生态位重叠值.结果表明:球孢白僵菌在这3种森林生态系统中分别为第三、第一和第二优势种.该菌在3种森林生态系统中的营养生态位宽度和时间生态位宽度均最大,远大干环链棒束孢、粉棒束孢和细脚棒束孢等优势种;该菌与其他优势种的时间生态位重叠值较大,而营养生态位重叠值较小.球孢白僵菌在3种森林生态系统中都是发生时间最长、寄主昆虫最丰富、适应环境能力最强的昆虫病原真菌.     

枣麦间作枣园主要蚧虫复合种群结构及生态位

为了有效地控制枣树蚧害,2002年在太谷地区对枣麦间作枣园的康氏粉蚧(Pseudococcus comstock Kuwane)、日本蜡蚧(Ceroplastes japonicus Green)和梨园蚧(Quadraspidiotus perniciosus Comstock)的复合种群结构及其生态位进行了系统研究.结果表明,在枣树发育早期,3种蚧虫分布范围主要在下、中部的东、南方位,康氏粉蚧的时空二维生态位的宽度较大,是该时期的优势种.到中期3种蚧虫复合种群的分布聚集在树冠上部的西、北方位,时 空二维生态位的宽度以日本蜡蚧较大,种间相似程度和竞争不明显.后期3种蚧虫的复合种群结构在各部位的各个方位的分布无明显差异,但梨园蚧的虫口密度较大,日本蜡蚧在生态位上占据较大的空间.与枣树发育的中期相比,3种蚧虫复合种群结构的相似性与种间竞争系数的平均值要小.蚧害预防应早期控制康氏粉蚧,中期调治3种蚧虫的危害,后期应采取措施压低越冬虫源.     

Climatic niche divergence explains angiosperm diversification across clades in China

Diversification rates are critically important for understanding patterns of species richness among clades. However, the effects of climatic niche width on plant diversification rates remain to be elucidated. Based on the phylogenetic, climatic, and distributional information of angiosperms in China, a total of 26 906 species from 182 families were included in this study. We aimed to test relationships between diversification rate and climatic niche width and climatic niche width related variables (including climatic niche divergence, climatic niche position, geographic extent, and climatic niche evolutionary rate) using phylogenetic methods. We found that climatic niche divergence had the largest unique contribution to the diversification rate, while the unique effects of climatic niche width, climatic niche position, geographic extent, and climatic niche evolutionary rate on the diversification rate were negligible. We also observed that the relationship between diversification rate and climatic niche divergence was significantly stronger than the null assumption (artefactual relationship between diversification and clade-level climatic niche width by sampling more species). Our study supports the hypothesis that wider family climatic niche widths explain faster diversification rates through a higher climatic niche divergence rather than through higher geographic extent, higher climatic niche evolutionary rate, or separated climatic niche position. Hence, the results provide a potential explanation for large-scale diversity patterns within families of plants.