West African rivers as biogeographic islands: species richness of fish communities

Summary Some factors influencing the species richness of West African fish communities were studied in a sample of 26 rivers using four habitat and hydrologic variables. Analysis of a larger sample of 39 rivers showed that species richness was positively related to area. A power function with an exponent of 0.32 gave the best fit. As the surface area used was that of the catchment area and not that (unknown) of the river, the biological significance of this relationship and the possibilities of comparison were limited. Ridge regression analysis and forward stepwise selection indicated that a model that explained ln(species richness) as a function of ln(mean annual discharge) and ln-(catchment surface area) was best, accounting for 90% of the variance of the dependent variable. The combination of surface area and discharge was presumed to act through the volume of water available for the fishes and habitat productivity. Habitat diversity, measured by the diversity of the terrestrial vegetation covering the catchment area, had no significant positive effect when surface area was used in the regression. Rivers (islands) should have fewer species than tributaries of similar size since, for fishes within a river system (continent), there is free circulation between all its branches. The model derived from the river data underestimated the species richness of a sample of 11 tributaries. This was compatible with the hypothesis of higher population extinction rates in insular biotopes. The residuals of the linear model did not show random geographical distribution; the rivers in some areas had more species than expected. The possibility that historical factors, especially Quaternary climatic variations, might cause this distribution is discussed.     

Global scale patterns of fish species richness in rivers

Explanations of spatial and temporal variation in species richness is a central theme in community ecology Until recently, most research has focused on small-scale phenomena, often emphasizing on local environmental factors and, thus, poorly reflecting large-scale processes that organize species richness In this paper, we analyze variations in species richness of indigeneous freshwater fish on a worldwide scale We show that factors related to species-area and species-energy theories statistically explain most of the variation in freshwater fish species richness across continents Historical events supposed to influence present distributions offish are of little assistence in explaining variations in fish species richness at the global scale Our model, which uses easily measured factors, should also be of practical value to aquatic conservation biology and natural resource management     

Taxonomic distinctness and species richness as measures of functional structure in bird assemblages

Most traditional "biodiversity" indices have an uncertain ecological interpretation, unfavourable sampling properties, and excessive data requirements. A new index of taxonomic distinctness (the average evolutionary distance between species in an assemblage) has many advantages over traditional measures, but its ecological interpretation remains unclear. We used published behavioural species data in conjunction with bird atlas data to quantify simple functional metrics (the fraction of species engaged in non-competitive interactions, and the average between-species disparity in habitat preferences) for breeding-bird assemblages in Europe and North America. We then analysed correlations of functional metrics with taxonomic distinctness and species richness, respectively. All functional metrics had weak, positive correlations with species richness. In contrast, correlations between functional metrics and taxonomic distinctness ranged from slightly negative to strongly positive, depending on the relative habitat heterogeneity, and on the resource involved in the between-species interaction. Strong positive correlations between taxonomic distinctness and the fraction of interactive species occurred for resources with few producer species per consumer species, and we suggest that taxonomic distinctness is consistently correlated with conservation worth. With its favourable sampling properties and data requirements, this taxonomic distinctness measure is a promising tool for biodiversity research and for environmental monitoring and management.     

Global mismatch between species richness and vulnerability of reef fish assemblages

The impact of anthropogenic activity on ecosystems has highlighted the need to move beyond the biogeographical delineation of species richness patterns to understanding the vulnerability of species assemblages, including the functional components that are linked to the processes they support. We developed a decision theory framework to quantitatively assess the global taxonomic and functional vulnerability of fish assemblages on tropical reefs using a combination of sensitivity to species loss, exposure to threats and extent of protection. Fish assemblages with high taxonomic and functional sensitivity are often exposed to threats but are largely missed by the global network of marine protected areas. We found that areas of high species richness spatially mismatch areas of high taxonomic and functional vulnerability. Nevertheless, there is strong spatial match between taxonomic and functional vulnerabilities suggesting a potential win–win conservation‐ecosystem service strategy if more protection is set in these locations.     

Predicting the structure and diversity of young-of-the-year fish assemblages in large rivers

1. Interactions between environmental variables and 0+ fish assemblages in the upper River Garonne (France) were quantified during late August 1995.
2. The abundance and diversity of the fish assemblages in floodplain channels were modelled using Artificial Neural Network (ANN) analysis and nine variables: the abundance of the six dominant species, fish specific richness, overall abundance of 0+ fish and the Shannon index of diversity. Multiple regression analysis was also used to assess ANN performance.
3. Using 596 samples, correlation coefficients ( r adjusted) between observed and estimated values of the nine dependent parameters were all highly significant ( P < 0.01). Expected values from the tested data were significantly related to the observed values. The correlation coefficient between observed and estimated values ( r ) varied from 0.70 to 0.85.
4. The ANN provided a high quality prediction, despite the complex nature of the relationship between microhabitat composition and fish abundance.
5. Garson's algorithm was used to provide the explanatory power needed in ecology when using black-box models. Parameters contained in the models (i.e. weighting) were used to determine the relative contributions of explanatory variables and thus to ascertain the structure of fish communities.     

Spatial predictability of juvenile fish species richness and abundance in a coral reef environment

Juvenile reef fish communities represent an essential component of coral reef ecosystems in the current focus of fish population dynamics and coral reef resilience. Juvenile fish survival depends on habitat characteristics and is, following settlement, the first determinant of the number of individuals within adult populations. The goal of this study was to provide methods for mapping juvenile fish species richness and abundance into spatial domains suitable for micro and meso-scale analysis and management decisions. Generalized Linear Models predicting juvenile fish species richness and abundance were developed according to spatial and temporal environmental variables measured from 10 m up to 10 km in the southwest lagoon of New Caledonia. The statistical model was further spatially generalized using a 1.5-m resolution, independently created, remotely sensed, habitat map. This procedure revealed that : (1) spatial factors at 10 to 100-m scale explained up to 71% of variability in juvenile species richness, (2) a small improvement (75%) was gained when a combination of environmental variables at different spatial and temporal scales was used and (3) the coupling of remotely sensed data, geographical information system tools and point-based ecological data showed that the highest species richness and abundance were predicted along a narrow margin overlapping the coral reef flat and adjacent seagrass beds. Spatially explicit models of species distribution may be relevant for the management of reef communities when strong relationships exist between faunistic and environmental variables and when models are built at appropriate scales.     

Abundance and dominance become less predictable as species richness decreases

Aim To test the hypothesis that communities with higher diversity have more predictable properties by examining patterns of community structure along a species richness gradient. Location Trinidad and Tobago (11°00 N, 61°00 W), on the South American continental shelf, opposite the Orinoco River delta, north‐east Venezuela. Methods We used quantile regressions to investigate how three total abundance, absolute and relative dominance measures – numerical abundance, biomass and energy use, respectively – change across a species richness gradient. We investigated which allocation rule best mimics community assembly in this species richness gradient by examining the abundance of the dominant species and comparing it with predictions of niche apportionment models. Results All measures of total abundance increase on average across the gradient, but the upper limit remains constant. On average, absolute dominance is constant, but the distance between the upper and lower limits decreases along the gradient. Relative dominance decreases with species richness. Observed dominance patterns are best described by Tokeshi's random fraction model. Main conclusions Our results show that both total abundance and absolute dominance become increasingly variable as biodiversity decreases. Consequently, our study suggests that ecosystem properties are less predictable when biodiversity is lower.     

Accuracy of species richness estimators applied to fish in small and large temperate lowland rivers

The performance of non-parametric species richness estimators (Program SPADE) was assessed by applying them to fish from two lowland waterways in Poland: (1) a stream sampled annually at one site for 23 years (13 of which were after the stream was turned into a canal), and (2) a river sampled twice annually at two sites (one natural, the other impounded) for 16 years. On each sampling occasion consecutive electrofishing runs were made and the species richness of the total sample (obtained in all the runs) was predicted by each estimator from the sub-sample of the first run. The estimators were applied to all of the samples collected in each waterway, which were referred to as the ‘rich group survey’ selection, and to two smaller selections, named the ‘improved survey’ and ‘complete survey’. The performance was evaluated using the measures PAR (percent of actual richness) and SRMSE (scaled root mean square error). Overall, the HM and Chao1-bc estimators were decisively better than others, and ACE1 and ACE were decisively worse both in terms of PAR and SRMSE. In the stream, the bed regulation little affected the performance of the estimators, but they were more correct when applied to the ‘improved survey’ selection rather than to the ‘rich group survey’ selection. In the river, the performance of most of the estimators, both in terms of PAR and SRMSE, was much improved only by selecting those samples for analysis that complied with the Chao-2 criterion (i.e., ‘complete survey’ selection).     

Assessing lake typologies and indicator fish species for Italian natural lakes using past fish richness and assemblages

In order to establish a fish-based typology of Italian lakes and identify possible reference and indicator fish species for each lake type, we analysed historical data on fish assemblages of all Italian natural lakes >0.5 km² from the period prior to the major decline in water quality in the 1950s. General linear regression models showed the ecoregion and lake altitude being the best predictors of fish species richness. The number of species was significantly higher in the Alpine than in the Mediterranean ecoregion. Among Alpine lakes, the number of fish species increased significantly with lake volume whilst decreased with altitude. In the Mediterranean lakes, none of the selected parameters was significant. Cluster analysis of fish assemblages (presence/absence) divided the lakes of the Alpine and Mediterranean ecoregions into four and two types, respectively. Pike (Esox lucius), rudd (Scardinius erythrophthalmus) and tench (Tinca tinca) were the main indicator species for the small and mostly shallow lakes in both the Alpine (Type 1) and Mediterranean (Type 6) ecoregions, minnow (Phoxinus phoxinus) for the alpine high altitude lakes (Type 2) and landlocked shad (Alosa fallax lacustris), European whitefish (Coregonus lavaretus) and burbot (Lota lota) for the large and very deep alpine lakes (Type 4). The European whitefish was the only indicator species for the deep Mediterranean lakes (Type 5). These species and associated fish assemblages may be useful indicators in future assessments of the ecological status of Italian lakes according to the European Directives (2000/60/EC and 2008/105/EC).     

Determinants of bird species richness: role of climate and vegetation structure at a regional scale

We examined the respective roles of climate and vegetation structure on geographical variation in bird species richness. The Province of Buenos Aires (central-eastern Argentina) was divided into 146 squares of 50 km on a side. For each square we evaluated the number of bird species, the value of thirteen climatic variables, and the value of a vegetation strata index. The climatic matrix was analyzed by Principal Component Analysis (PCA), and the first factors resulting from PCA were considered as multifactorial climatic gradients. Simple and Partial Correlation Analysis among bird species richness, vegetation strata, and the first two factors derived from PCA (65% of total variation) indicated that bird richness distribution was determined by the availability of vegetation strata, associated with different vegetation types that, at the same time, were influenced by the climatic conditions summarized in the first climatic factor (a gradient of precipitation, relative humidity, annual termical amplitude, and frost occurrence). This relationships reflect the complexity of factors that can act directly as well as indirectly on the geographical patterns in species richness. Also, we evaluated the importance of study scale comparing our results with previous studies at macrogeographic and local scales, found out that the vegetation structure was the principal determinant of bird species richness at this three geographical scales.     

Abundance and species richness of fish associated to Thalassia testudinum at Cariaco Gulf, Venezuela

Fish are among the most abundant and diverse groups in Thalassia testudinum communities, in turn considered among the most productive and important ecosystems in marine environments. Three stations were sampled in the southern shore of Cariaco gulf (northwestern Venezuela) to quantify fish associated with T. testudinum, from December 1996 to November 1997. We used a 50 m long beach net ("chinchorro playero", height 1.50 m, mesh opening 0.7 cm. A total of 15 509 individuals were collected: 27 families, 38 genera and 44 specie were identified. The most abundant, in descending order, were Haemulon boschmae, Nicholsina usta, Orthopristis ruber, Xenomelaniris brasiliensis and Diplodus argenteus. Thirty three species were occasional visitors (75.0%) and ten were recurrent visitors (22.7%). The permanent resident, N. usta, is a characteristic species that uses T. testudinum throughout its life cycle.     

Macroecological patterns of species richness in parasite assemblages

The diversity of parasite species exploiting a host population varies substantially among different host species. This review summarizes the main predictions generated by the two main theoretical frameworks used to study parasite diversity. The first is island biogeography theory, which predicts that host features, such as body size, that are associated with the probability of colonization by new parasite species, should covary with parasite species richness. The second predictive framework derives from epidemiological modelling; it predicts that host species with features that increase parasite transmission success among host individuals, such as high population density, will sustain a greater diversity of parasite species. A survey of comparative studies of parasite diversity among fish and mammalian host species finds support for most of the predictions derived from the above two theoretical perspectives. This empirical support, however, is not universal. It is often qualitative only, because quantitative predictions are lacking. Finally, the amount of variance in parasite diversity explained by host features is generally low. To move forward, the search for the determinants of parasite diversity will need to rely less on theories developed for free-living organisms, and more on its own set of hypotheses incorporating specific host–parasite interactions such as immune responses.

Zusammenfassung

Die Diversität der Parasitenarten, die eine Wirtspopulation nutzen, variiert erheblich zwischen verschiedenen Wirtsarten. Dieser Review fasst die hauptsächlichen Vorhersagen zusammen, die von den zwei wichtigsten theoretischen Rahmenkonzepten hervorgebracht werden, die für die Untersuchung der Parasitendiversität genutzt werden. Die erste ist die Inselbiogeografie, die vorhersagt, dass Wirtsmerkmale, die mit der Besiedlungswahrscheinlichkeit durch einen neuen Parasiten verknüpft sind, wie beispielsweise die Körpergröße, mit dem Artenreichtum der Parasiten kovariieren sollten. Das zweite Rahmenkonzept ist aus der epidemiologischen Modellierung abgeleitet. Es sagt vorher, dass Wirtsarten mit Merkmalen, die den Übertragungserfolg der Parasiten zwischen den Wirtsindividuen erhöhen, wie beispielsweise hohe Populationsdichten, eine größere Diversität von Parasitenarten erhalten werden. Eine Begutachtung von vergleichenden Untersuchungen über Parasitendiversität bei Fischen und Säugetieren als Wirtsarten unterstützt die meisten der Vorhersagen, die von den oben genannten zwei theoretischen Perspektiven abgeleitet sind. Diese empirische Bestätigung ist jedoch nicht allgemein gültig. Sie ist häufig nur qualitativ, da quantitative Vorhersagen fehlen. Schließlich ist der Anteil der Varianz in der Parasitendiversität, der durch die Wirtsmerkmale erklärt wird, normalerweise gering. Um vorwärts zu kommen muss sich die Suche nach den bestimmenden Faktoren der Parasitendiversität weniger auf Theorien, die für freilebende Organismen entwickelt wurden, und mehr auf ihre eigene Menge von Hypothesen verlassen, die spezifische Wirt-Parasit-Interaktionen, wie beispielsweise Immunreaktionen, mit einbeziehen.     

Behavioral responses to food odor in juvenile marine fish: Acuity varies with species and fish length

This study tested the hypothesis that acuity of behavioral responses to food odor in three commercially important species of marine fish would increase as juvenile length increased. Swimming activity among two size groups of fish was measured in the presence of a series of squid extract dilutions. Increased swimming activity in juvenile Pacific halibut Hippoglossus stenolepis Schmidt, walleye pollock Theragra chalcogramma Pallas, and sablefish Anoplopoma fimbria Pallas was stimulated above threshold concentrations of squid extract, expressed as dilution from full strength. Maximum chemosensory acuity was observed in smaller (8-14 cm total length, TL) Pacific halibut and walleye pollock, while larger sablefish (15-23 cm TL) continued to develop acuity. Response thresholds were highest (10^− 3 dilution) in Pacific halibut, at intermediate levels (10^− 4-10^− 6 dilution) in walleye pollock and smaller sablefish and reached the lowest levels (10^− 13 dilution) in larger sablefish. The widely held view that dissolved free amino acids (DFAA) are the primary chemosensory stimulants for fish food searching may not be valid for sablefish, as they detected squid extract at dilutions containing DFAA that appeared to be far below ambient sea water DFAA concentrations.     

Species richness and functional structure of fish assemblages in three freshwater habitats: effects of environmental factors and management

In this study, the inverted trophic hypothesis was tested in the freshwater fish communities of a reservoir. The distribution of fish species in three freshwater habitats in the Jurumirim Reservoir, Brazil, was examined using both species richness and the relative proportions of different trophic groups. These groups were used as a proxy for functional structure in an attempt to test the ability of these measures to assess fish diversity. Assemblage structures were first described using non-metric multidimensional scaling (NMDS). The influence of environmental conditions for multiple fish assemblage response variables (richness, total abundance and abundance per trophic group) was tested using generalised linear mixed models (GLMM). The metric typically employed to describe diversity; that is, species richness, was not related to environmental conditions. However, absolute species abundance was relatively well explained with up to 54% of the variation in the observed data accounted for. Differences in the dominance of trophic groups were most apparent in response to the presence of introduced fish species: the iliophagous and piscivorous trophic groups were positively associated, while detritivores and herbivores were negatively associated, with the alien species. This suggests that monitoring functional diversity might be more valuable than species diversity for assessing effects of disturbances and managements policies on the fish community.